View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6698_low_24 (Length: 479)

Name: NF6698_low_24
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6698_low_24
NF6698_low_24
[»] chr4 (90 HSPs)
chr4 (112-479)||(55119797-55120163)
chr4 (3-79)||(55669625-55669701)
chr4 (112-236)||(26040397-26040521)
chr4 (111-237)||(54339060-54339185)
chr4 (108-208)||(51018412-51018512)
chr4 (50-116)||(47188761-47188827)
chr4 (112-235)||(30475374-30475497)
chr4 (110-235)||(23765527-23765652)
chr4 (47-116)||(34316819-34316888)
chr4 (111-232)||(41956249-41956370)
chr4 (110-159)||(55669764-55669813)
chr4 (112-204)||(35675227-35675319)
chr4 (139-235)||(40988163-40988259)
chr4 (110-169)||(19328963-19329022)
chr4 (110-169)||(35808431-35808490)
chr4 (47-114)||(45688687-45688754)
chr4 (64-115)||(55669700-55669751)
chr4 (118-208)||(31494704-31494794)
chr4 (110-236)||(34016574-34016699)
chr4 (47-116)||(2362573-2362642)
chr4 (136-233)||(23690980-23691076)
chr4 (107-204)||(35927306-35927403)
chr4 (51-116)||(50514709-50514774)
chr4 (52-116)||(23765527-23765591)
chr4 (136-204)||(31010488-31010556)
chr4 (112-236)||(47188702-47188826)
chr4 (112-192)||(51266916-51266996)
chr4 (49-116)||(26040456-26040523)
chr4 (110-236)||(45688691-45688817)
chr4 (112-169)||(31754953-31755010)
chr4 (112-209)||(36486723-36486820)
chr4 (113-170)||(52341615-52341672)
chr4 (51-116)||(54339061-54339126)
chr4 (108-192)||(3769805-3769889)
chr4 (112-208)||(15986242-15986338)
chr4 (111-159)||(20811288-20811336)
chr4 (52-116)||(30475374-30475438)
chr4 (112-168)||(46823488-46823544)
chr4 (112-208)||(48513595-48513691)
chr4 (112-236)||(2362577-2362703)
chr4 (117-180)||(3472127-3472190)
chr4 (56-115)||(20456522-20456581)
chr4 (110-169)||(31168149-31168208)
chr4 (132-226)||(9693528-9693622)
chr4 (50-116)||(41956309-41956375)
chr4 (118-208)||(52895700-52895790)
chr4 (118-203)||(3684529-3684613)
chr4 (116-169)||(10100154-10100207)
chr4 (110-159)||(27839341-27839390)
chr4 (112-157)||(32131169-32131214)
chr4 (49-115)||(45088020-45088082)
chr4 (112-204)||(39158363-39158455)
chr4 (112-172)||(44478713-44478773)
chr4 (110-208)||(45088046-45088141)
chr4 (111-239)||(50514649-50514777)
chr4 (108-171)||(2940272-2940335)
chr4 (49-116)||(19329024-19329086)
chr4 (111-169)||(34316758-34316817)
chr4 (107-170)||(52021046-52021109)
chr4 (112-170)||(13498154-13498212)
chr4 (112-162)||(35511217-35511267)
chr4 (78-116)||(35808492-35808530)
chr4 (112-169)||(33951715-33951772)
chr4 (74-115)||(51266895-51266936)
chr4 (108-204)||(966562-966658)
chr4 (149-237)||(20435896-20435984)
chr4 (51-115)||(26831882-26831946)
chr4 (112-176)||(39418155-39418219)
chr4 (117-169)||(40436096-40436148)
chr4 (61-116)||(9693567-9693622)
chr4 (50-116)||(31168081-31168147)
chr4 (65-116)||(33951662-33951713)
chr4 (112-171)||(49483110-49483169)
chr4 (112-154)||(11996140-11996182)
chr4 (108-154)||(13966589-13966635)
chr4 (113-163)||(20435828-20435878)
chr4 (49-115)||(34016572-34016637)
chr4 (126-171)||(1457586-1457631)
chr4 (112-149)||(19876220-19876257)
chr4 (108-192)||(23260696-23260781)
chr4 (75-116)||(27839402-27839443)
chr4 (79-116)||(31754914-31754951)
chr4 (123-204)||(37771154-37771234)
chr4 (50-91)||(50620715-50620756)
chr4 (50-90)||(11086379-11086419)
chr4 (112-208)||(20456545-20456641)
chr4 (79-115)||(20811239-20811275)
chr4 (117-197)||(21760557-21760637)
chr4 (50-102)||(27976844-27976896)
chr4 (199-239)||(49483027-49483067)
[»] chr1 (73 HSPs)
chr1 (112-237)||(43168088-43168213)
chr1 (112-237)||(14331784-14331909)
chr1 (112-209)||(8892805-8892902)
chr1 (118-237)||(44359712-44359831)
chr1 (116-237)||(48938583-48938703)
chr1 (50-116)||(27209814-27209880)
chr1 (110-236)||(4940772-4940898)
chr1 (50-116)||(22346330-22346396)
chr1 (111-243)||(27209754-27209886)
chr1 (112-235)||(47895283-47895406)
chr1 (111-204)||(28850943-28851035)
chr1 (50-114)||(7190570-7190634)
chr1 (117-204)||(17402928-17403015)
chr1 (110-169)||(42607356-42607415)
chr1 (110-208)||(11385957-11386055)
chr1 (112-169)||(50295467-50295524)
chr1 (110-209)||(932189-932288)
chr1 (110-169)||(6170583-6170642)
chr1 (112-171)||(16691307-16691366)
chr1 (117-203)||(27210705-27210792)
chr1 (110-169)||(34874582-34874641)
chr1 (110-169)||(41147510-41147569)
chr1 (110-169)||(47655403-47655462)
chr1 (49-116)||(49508826-49508893)
chr1 (118-192)||(25177489-25177563)
chr1 (111-169)||(32213922-32213980)
chr1 (117-235)||(43433724-43433842)
chr1 (112-169)||(11385844-11385901)
chr1 (112-169)||(22346271-22346328)
chr1 (110-203)||(26469614-26469707)
chr1 (112-169)||(40845266-40845323)
chr1 (112-169)||(49901941-49901998)
chr1 (52-116)||(43433724-43433788)
chr1 (117-236)||(7190514-7190633)
chr1 (118-193)||(21268335-21268409)
chr1 (110-169)||(33929981-33930040)
chr1 (110-165)||(49508766-49508820)
chr1 (50-116)||(6170644-6170710)
chr1 (52-114)||(47895283-47895345)
chr1 (110-159)||(2125739-2125788)
chr1 (112-189)||(41898893-41898970)
chr1 (111-159)||(45721777-45721825)
chr1 (126-170)||(46296233-46296277)
chr1 (49-116)||(4940833-4940900)
chr1 (117-236)||(32267957-32268076)
chr1 (111-157)||(5945447-5945493)
chr1 (50-116)||(8244044-8244110)
chr1 (74-116)||(24140744-24140786)
chr1 (126-208)||(52396419-52396501)
chr1 (112-169)||(24140788-24140845)
chr1 (75-116)||(41147571-41147612)
chr1 (117-234)||(51046683-51046800)
chr1 (84-116)||(33929947-33929979)
chr1 (84-116)||(34874548-34874580)
chr1 (112-171)||(10832240-10832299)
chr1 (110-169)||(50154488-50154547)
chr1 (111-169)||(4656031-4656089)
chr1 (84-114)||(9055907-9055937)
chr1 (49-115)||(45721701-45721767)
chr1 (74-116)||(50154444-50154486)
chr1 (126-192)||(51424149-51424215)
chr1 (75-116)||(11385953-11385994)
chr1 (107-176)||(27935051-27935120)
chr1 (123-152)||(44286904-44286933)
chr1 (51-115)||(14331785-14331849)
chr1 (47-87)||(26701492-26701532)
chr1 (124-192)||(27160139-27160207)
chr1 (84-116)||(29966803-29966835)
chr1 (110-169)||(29966837-29966897)
chr1 (51-115)||(43168089-43168153)
chr1 (51-115)||(44359766-44359830)
chr1 (50-90)||(44603735-44603775)
chr1 (84-116)||(49901907-49901939)
[»] chr7 (70 HSPs)
chr7 (136-237)||(16931838-16931939)
chr7 (136-237)||(16937221-16937322)
chr7 (112-237)||(30388697-30388821)
chr7 (118-208)||(34835840-34835930)
chr7 (111-236)||(1910192-1910317)
chr7 (112-208)||(42222197-42222293)
chr7 (112-208)||(48879646-48879742)
chr7 (118-235)||(10575802-10575919)
chr7 (51-116)||(29687424-29687489)
chr7 (117-237)||(7322995-7323115)
chr7 (112-208)||(29034663-29034759)
chr7 (112-236)||(49069503-49069627)
chr7 (110-236)||(8292693-8292819)
chr7 (116-169)||(27053534-27053587)
chr7 (112-169)||(43567543-43567600)
chr7 (47-115)||(8292689-8292757)
chr7 (138-242)||(16957608-16957711)
chr7 (114-198)||(27236848-27236932)
chr7 (110-208)||(36279098-36279193)
chr7 (108-203)||(3720147-3720242)
chr7 (110-169)||(8380456-8380515)
chr7 (111-169)||(3681709-3681767)
chr7 (49-114)||(1910190-1910255)
chr7 (51-116)||(7323049-7323114)
chr7 (51-116)||(8258734-8258799)
chr7 (110-159)||(41188821-41188870)
chr7 (111-159)||(5348008-5348056)
chr7 (111-159)||(48454858-48454906)
chr7 (112-159)||(5240369-5240416)
chr7 (110-208)||(22521562-22521660)
chr7 (111-169)||(40763264-40763322)
chr7 (51-116)||(5240428-5240493)
chr7 (112-204)||(4686080-4686172)
chr7 (111-167)||(6548547-6548603)
chr7 (113-169)||(29687491-29687547)
chr7 (60-116)||(29959024-29959080)
chr7 (128-204)||(35404307-35404383)
chr7 (112-152)||(40066954-40066994)
chr7 (116-159)||(30538521-30538564)
chr7 (45-114)||(36279067-36279133)
chr7 (108-171)||(40774275-40774338)
chr7 (116-159)||(43958124-43958167)
chr7 (51-89)||(16492144-16492182)
chr7 (108-170)||(32204196-32204258)
chr7 (127-169)||(46478607-46478649)
chr7 (118-171)||(5543059-5543112)
chr7 (112-169)||(8258675-8258732)
chr7 (84-116)||(5348065-5348097)
chr7 (110-154)||(22707079-22707123)
chr7 (84-116)||(24359804-24359836)
chr7 (74-114)||(29034658-29034698)
chr7 (139-171)||(29247936-29247968)
chr7 (117-169)||(31626083-31626135)
chr7 (112-168)||(41141040-41141096)
chr7 (117-172)||(5977757-5977812)
chr7 (73-116)||(8380411-8380454)
chr7 (114-169)||(24359747-24359802)
chr7 (116-171)||(35003618-35003673)
chr7 (117-202)||(41769690-41769776)
chr7 (108-166)||(45724805-45724863)
chr7 (124-181)||(14718167-14718224)
chr7 (131-204)||(18800204-18800277)
chr7 (117-154)||(21577685-21577722)
chr7 (124-169)||(40194841-40194886)
chr7 (116-169)||(46042763-46042816)
chr7 (51-119)||(3408139-3408207)
chr7 (116-192)||(16082473-16082549)
chr7 (51-91)||(24937936-24937976)
chr7 (139-203)||(42552535-42552599)
chr7 (123-171)||(43189685-43189733)
[»] chr5 (58 HSPs)
chr5 (117-242)||(10163668-10163793)
chr5 (110-240)||(39567847-39567977)
chr5 (108-208)||(38610325-38610425)
chr5 (112-236)||(25017328-25017452)
chr5 (52-116)||(39567852-39567916)
chr5 (49-116)||(16315628-16315695)
chr5 (51-116)||(35653351-35653416)
chr5 (112-208)||(39167572-39167667)
chr5 (111-238)||(5151435-5151562)
chr5 (110-237)||(12914122-12914249)
chr5 (110-237)||(35653290-35653417)
chr5 (51-116)||(12914123-12914188)
chr5 (49-114)||(34546724-34546789)
chr5 (111-243)||(3639111-3639242)
chr5 (112-159)||(12068211-12068258)
chr5 (45-115)||(27823203-27823274)
chr5 (112-175)||(39069313-39069376)
chr5 (110-169)||(43414099-43414158)
chr5 (50-116)||(8410089-8410155)
chr5 (136-197)||(4293892-4293953)
chr5 (111-192)||(4962552-4962633)
chr5 (47-116)||(25017387-25017456)
chr5 (111-192)||(28143159-28143240)
chr5 (108-204)||(20184581-20184677)
chr5 (110-169)||(4421999-4422058)
chr5 (116-159)||(8410167-8410210)
chr5 (110-236)||(16315569-16315693)
chr5 (57-115)||(4422061-4422119)
chr5 (110-208)||(39692986-39693084)
chr5 (111-236)||(34546726-34546851)
chr5 (112-169)||(37243862-37243919)
chr5 (112-152)||(27823291-27823331)
chr5 (112-159)||(1759842-1759889)
chr5 (51-114)||(5151437-5151500)
chr5 (110-169)||(13951271-13951330)
chr5 (112-159)||(28599691-28599738)
chr5 (112-170)||(678464-678522)
chr5 (116-170)||(3015091-3015145)
chr5 (118-176)||(24288495-24288553)
chr5 (118-176)||(24373668-24373726)
chr5 (111-169)||(35945261-35945319)
chr5 (112-169)||(338801-338858)
chr5 (110-159)||(1479171-1479220)
chr5 (75-116)||(13951332-13951373)
chr5 (124-192)||(2970122-2970190)
chr5 (50-85)||(104984-105019)
chr5 (108-171)||(3241986-3242049)
chr5 (110-145)||(15915871-15915906)
chr5 (108-171)||(17168689-17168752)
chr5 (50-116)||(3639170-3639236)
chr5 (116-166)||(12349585-12349635)
chr5 (108-166)||(19894836-19894894)
chr5 (124-181)||(17605964-17606021)
chr5 (110-159)||(25568327-25568376)
chr5 (118-171)||(39076622-39076675)
chr5 (117-170)||(39335487-39335540)
chr5 (117-169)||(5058760-5058812)
chr5 (112-168)||(28996229-28996285)
[»] chr8 (45 HSPs)
chr8 (118-237)||(11295507-11295626)
chr8 (118-190)||(11332837-11332909)
chr8 (108-228)||(38869960-38870080)
chr8 (110-169)||(25249376-25249435)
chr8 (110-237)||(4989883-4990007)
chr8 (51-116)||(4989884-4989949)
chr8 (110-236)||(26672738-26672864)
chr8 (110-239)||(6433489-6433618)
chr8 (49-116)||(3174402-3174469)
chr8 (110-169)||(18068977-18069036)
chr8 (117-204)||(31596463-31596549)
chr8 (112-206)||(19389347-19389441)
chr8 (118-176)||(34421361-34421419)
chr8 (112-192)||(26892778-26892858)
chr8 (111-159)||(45338029-45338077)
chr8 (112-159)||(3174485-3174532)
chr8 (112-159)||(8018786-8018833)
chr8 (117-216)||(10694775-10694874)
chr8 (111-169)||(6939173-6939231)
chr8 (111-169)||(26195409-26195467)
chr8 (112-169)||(21016249-21016306)
chr8 (124-169)||(33741523-33741568)
chr8 (48-91)||(26672735-26672778)
chr8 (111-169)||(21016093-21016151)
chr8 (110-159)||(5129491-5129540)
chr8 (123-204)||(7473553-7473634)
chr8 (124-172)||(35973925-35973973)
chr8 (112-192)||(39972189-39972269)
chr8 (116-167)||(8210167-8210218)
chr8 (51-90)||(27982417-27982456)
chr8 (51-90)||(28039719-28039758)
chr8 (47-116)||(44874281-44874346)
chr8 (111-154)||(44874355-44874398)
chr8 (49-115)||(24066897-24066963)
chr8 (117-170)||(4308823-4308876)
chr8 (49-118)||(27619216-27619285)
chr8 (112-169)||(34713958-34714015)
chr8 (111-208)||(37433242-37433338)
chr8 (117-197)||(6396315-6396395)
chr8 (54-98)||(18068241-18068285)
chr8 (48-88)||(18131299-18131339)
chr8 (84-116)||(21016153-21016185)
chr8 (112-192)||(24304934-24305013)
chr8 (112-152)||(35930168-35930208)
chr8 (76-116)||(37433239-37433279)
[»] chr2 (61 HSPs)
chr2 (111-236)||(2966488-2966613)
chr2 (112-236)||(6999150-6999274)
chr2 (111-235)||(39085828-39085952)
chr2 (118-233)||(33848937-33849052)
chr2 (49-116)||(6999148-6999215)
chr2 (108-192)||(2239574-2239658)
chr2 (112-236)||(11659210-11659334)
chr2 (136-208)||(16242011-16242083)
chr2 (112-208)||(33726356-33726452)
chr2 (112-237)||(34392589-34392709)
chr2 (73-116)||(862559-862602)
chr2 (49-116)||(2966486-2966553)
chr2 (110-169)||(33864370-33864429)
chr2 (111-169)||(765186-765244)
chr2 (112-169)||(862604-862661)
chr2 (111-224)||(27495083-27495196)
chr2 (111-207)||(35445326-35445423)
chr2 (117-169)||(9201537-9201589)
chr2 (136-192)||(12695299-12695355)
chr2 (117-169)||(17095108-17095160)
chr2 (116-204)||(34512626-34512714)
chr2 (117-169)||(44299723-44299775)
chr2 (112-171)||(747528-747587)
chr2 (110-169)||(13997939-13997998)
chr2 (112-159)||(23685689-23685736)
chr2 (52-115)||(39085889-39085952)
chr2 (137-192)||(40798385-40798440)
chr2 (74-116)||(16361537-16361579)
chr2 (126-204)||(30831598-30831676)
chr2 (110-159)||(17603836-17603885)
chr2 (63-116)||(27495083-27495136)
chr2 (111-234)||(1321117-1321241)
chr2 (116-204)||(14120863-14120951)
chr2 (111-159)||(16361591-16361639)
chr2 (117-169)||(17056099-17056151)
chr2 (117-169)||(17068546-17068598)
chr2 (117-169)||(17074529-17074581)
chr2 (114-158)||(17118412-17118456)
chr2 (53-115)||(1321117-1321180)
chr2 (111-169)||(39401571-39401628)
chr2 (47-116)||(39401630-39401693)
chr2 (126-192)||(2805373-2805441)
chr2 (118-159)||(9965098-9965139)
chr2 (111-148)||(11445327-11445364)
chr2 (54-115)||(23685749-23685810)
chr2 (114-171)||(29260167-29260224)
chr2 (108-169)||(34220679-34220740)
chr2 (112-169)||(41436493-41436550)
chr2 (120-192)||(3454743-3454814)
chr2 (53-116)||(9201590-9201653)
chr2 (73-116)||(17056153-17056196)
chr2 (73-116)||(17068600-17068643)
chr2 (73-116)||(41436448-41436491)
chr2 (110-169)||(44173134-44173193)
chr2 (47-89)||(6084650-6084692)
chr2 (111-197)||(10900286-10900372)
chr2 (111-169)||(43140359-43140417)
chr2 (73-114)||(17074585-17074626)
chr2 (112-176)||(1729493-1729556)
chr2 (51-91)||(1870462-1870502)
chr2 (51-115)||(34392645-34392708)
[»] chr6 (35 HSPs)
chr6 (107-237)||(6507421-6507551)
chr6 (120-237)||(34780023-34780140)
chr6 (52-116)||(7875277-7875341)
chr6 (53-116)||(26572173-26572236)
chr6 (112-238)||(10855379-10855504)
chr6 (112-202)||(14232528-14232618)
chr6 (110-169)||(7875216-7875275)
chr6 (110-236)||(7880462-7880588)
chr6 (54-116)||(16437678-16437740)
chr6 (118-184)||(29964301-29964367)
chr6 (50-107)||(7880532-7880589)
chr6 (110-192)||(12191485-12191567)
chr6 (136-233)||(12226392-12226489)
chr6 (183-239)||(19645942-19645998)
chr6 (118-170)||(27127550-27127602)
chr6 (110-169)||(6866930-6866989)
chr6 (51-113)||(10855381-10855443)
chr6 (51-119)||(19645945-19646013)
chr6 (110-169)||(5578289-5578348)
chr6 (115-234)||(26572117-26572236)
chr6 (112-159)||(29692378-29692425)
chr6 (112-170)||(28014649-28014707)
chr6 (108-193)||(20775026-20775111)
chr6 (75-116)||(32786041-32786082)
chr6 (74-114)||(5578245-5578285)
chr6 (51-115)||(12191442-12191505)
chr6 (136-187)||(5029513-5029564)
chr6 (118-169)||(8324147-8324198)
chr6 (111-169)||(7274250-7274308)
chr6 (51-89)||(8825035-8825073)
chr6 (117-175)||(21186059-21186117)
chr6 (116-186)||(22414632-22414701)
chr6 (112-193)||(21427275-21427356)
chr6 (47-91)||(6770939-6770983)
chr6 (124-204)||(31490739-31490819)
[»] chr3 (60 HSPs)
chr3 (110-246)||(51817347-51817483)
chr3 (49-115)||(44570483-44570549)
chr3 (47-116)||(10854803-10854872)
chr3 (111-236)||(44570422-44570547)
chr3 (124-237)||(31647252-31647364)
chr3 (110-210)||(8715536-8715636)
chr3 (110-210)||(9067423-9067523)
chr3 (51-115)||(12050986-12051050)
chr3 (112-204)||(34060803-34060895)
chr3 (139-207)||(51256137-51256205)
chr3 (110-169)||(37509126-37509185)
chr3 (111-169)||(46317501-46317559)
chr3 (48-110)||(51817414-51817476)
chr3 (112-192)||(45899580-45899661)
chr3 (112-169)||(52570797-52570854)
chr3 (110-169)||(4759885-4759944)
chr3 (49-116)||(29915671-29915738)
chr3 (49-116)||(29964824-29964891)
chr3 (111-208)||(8847488-8847585)
chr3 (116-169)||(12905323-12905376)
chr3 (112-169)||(36730190-36730247)
chr3 (112-204)||(29213397-29213489)
chr3 (51-115)||(31647253-31647316)
chr3 (110-238)||(32415516-32415643)
chr3 (72-116)||(36730249-36730293)
chr3 (113-169)||(44695709-44695765)
chr3 (48-116)||(8715597-8715667)
chr3 (48-116)||(9067484-9067554)
chr3 (110-169)||(10854874-10854933)
chr3 (112-159)||(29915612-29915659)
chr3 (112-159)||(29964765-29964812)
chr3 (49-116)||(46317433-46317499)
chr3 (113-175)||(11316975-11317037)
chr3 (51-116)||(32415518-32415582)
chr3 (111-159)||(35306357-35306405)
chr3 (112-184)||(39436465-39436537)
chr3 (119-166)||(49976185-49976232)
chr3 (108-170)||(18820-18882)
chr3 (108-170)||(18961-19023)
chr3 (108-170)||(21324530-21324591)
chr3 (112-170)||(48313875-48313933)
chr3 (79-116)||(12905378-12905415)
chr3 (112-192)||(13647073-13647156)
chr3 (113-154)||(33641282-33641323)
chr3 (74-115)||(35306303-35306344)
chr3 (124-236)||(12050986-12051098)
chr3 (112-236)||(41345923-41346047)
chr3 (111-170)||(271202-271261)
chr3 (64-115)||(8847549-8847600)
chr3 (112-171)||(12060096-12060155)
chr3 (111-170)||(34750293-34750352)
chr3 (118-204)||(3304972-3305057)
chr3 (48-102)||(20406661-20406715)
chr3 (199-237)||(30567651-30567689)
chr3 (124-202)||(35069657-35069735)
chr3 (108-170)||(39974839-39974901)
chr3 (110-159)||(20227415-20227464)
chr3 (126-171)||(50420697-50420742)
chr3 (48-116)||(52570728-52570795)
chr3 (84-116)||(4759946-4759978)
[»] scaffold0144 (2 HSPs)
scaffold0144 (112-236)||(39537-39659)
scaffold0144 (48-115)||(39534-39601)
[»] scaffold0161 (1 HSPs)
scaffold0161 (116-204)||(8772-8861)
[»] scaffold0062 (6 HSPs)
scaffold0062 (116-169)||(16812-16865)
scaffold0062 (116-169)||(26980-27033)
scaffold0062 (116-169)||(37146-37199)
scaffold0062 (75-116)||(16867-16908)
scaffold0062 (75-116)||(27035-27076)
scaffold0062 (75-116)||(37201-37242)
[»] scaffold0002 (1 HSPs)
scaffold0002 (110-169)||(392167-392226)
[»] scaffold0101 (1 HSPs)
scaffold0101 (121-171)||(11093-11143)
[»] scaffold2122 (1 HSPs)
scaffold2122 (112-168)||(655-711)
[»] scaffold0169 (1 HSPs)
scaffold0169 (117-165)||(9050-9098)


Alignment Details
Target: chr4 (Bit Score: 262; Significance: 1e-146; HSPs: 90)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 112 - 479
Target Start/End: Complemental strand, 55120163 - 55119797
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||| ||||| |||||||||||  ||||| |||||||||||||||||||||||||||||| || |||||||||||| |||| ||||||||||||||| ||    
T  55120163 attgaaaaatagtgaaaaatgaagaatttgactttttaaaagtcaaaacattgttgaattcaacataaatatacta-ttttgattttcttaaccattgct 55120065  T
Q  212 ctgaggacaatggttagcaagacccaaattttttaaccgttaattttaccacacattataaatttcattcgtcagcttaaatactaacacttgacatcta 311  Q
    |||||| || |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55120064 ctgagggcactggtcagcaagacccaaattttttaaccgttaattttaccacacattataaatttcattcgtcagcttaaatactaacacttgacatcta 55119965  T
Q  312 tcttattcccnnnnnnncaccccataaaaagtataagatttctctatatttttctctcaatccctcctatccaaacttcaaccaaacatacagtgtctgg 411  Q
    ||||||||||       ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  55119964 tcttattcccaaaaaaacacaccataaaaagtataagatttctctatatttttctctcaatccctcctatccaaacttcaaccaaacatacggtgtctgg 55119865  T
Q  412 catgtggcctgtgactcaaannnnnnngcttacatggatgacttcttcttcaaaattattagggttta 479  Q
    ||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||    
T  55119864 catgtggcctgtgactcaaaaaaatttgcttacatggatgacttcttcttcaaaattattagggttta 55119797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 3 - 79
Target Start/End: Original strand, 55669625 - 55669701
Alignment:
Q  3 tgctgtcaactgcaacaaacctcagcaataagatcactataaacttaagggtcttgctaaccattgccctgagggca 79  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55669625 tgctgtcaactgcaacaaacctcagcaataagatcactataaacttaagggtcttgctaaccattgccctgagggca 55669701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 26040397 - 26040521
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||| |||||||||   |||  |||||| ||||||||   || |||||||| | ||    
T  26040397 attggaaaatggtgaaaagtgataagtttaactttttaaaagtcaaaatattgttgaagccaatgcaaatatgctacttttggcttccttaaccactgct 26040496  T
Q  212 ctgaggacaatggttagcaagaccc 236  Q
    |||||||||||||||||||||||||    
T  26040497 ctgaggacaatggttagcaagaccc 26040521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 111 - 237
Target Start/End: Complemental strand, 54339185 - 54339060
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||||||| ||| |||||   ||| ||||||| |||||||| | || |||||||||| |    
T  54339185 cattgaaaaatggtgaaaa-tgataaatttaattttttaaaagtcaaaatatttttgaaaccaatgtaaatatgctacttttgacttccttaaccattgc 54339087  T
Q  211 tctgaggacaatggttagcaagaccca 237  Q
    ||||||| |||||||||||||||||||    
T  54339086 tctgagggcaatggttagcaagaccca 54339060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 51018412 - 51018512
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccat 207  Q
    |||||||| ||||||||||||| |||  ||||||||||||||||| | |||||||||||||||| ||| |||||||||||||||||||||  ||||||||    
T  51018412 ttgcattgaaaaatggtgaaaagtgaagaatttaactttttaaaaattaaaacattgttgaattcaatgtaaatatactacttttaatttctttaaccat 51018511  T
Q  208 t 208  Q
    |    
T  51018512 t 51018512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 47188827 - 47188761
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||||||    
T  47188827 agggtcttgctaaccattgccatcagggcaatggttaaggaagccaaaagtagcatgtttgcattgg 47188761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 30475497 - 30475374
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||| ||||||||||||| ||||||||||||||||||||| ||||||| |||||||||   |||  ||| ||| |||||||   || |||||| ||| ||    
T  30475497 attgaaaaatggtgaaaagtgataaatttaactttttaaatgtcaaaatattgttgaaaccaatgcaaacatattacttttggcttccttaactattgct 30475398  T
Q  212 ctgaggacaatggttagcaagacc 235  Q
    |||||| |||||||||||||||||    
T  30475397 ctgagggcaatggttagcaagacc 30475374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 235
Target Start/End: Complemental strand, 23765652 - 23765527
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||  ||||||||   |||  ||| || |||||||||  || |||||| |||     
T  23765652 gcattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttccttaacaattg 23765553  T
Q  210 ctctgaggacaatggttagcaagacc 235  Q
      |||||| |||||||||||||||||    
T  23765552 tcctgagggcaatggttagcaagacc 23765527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 34316888 - 34316819
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||| ||||||||||  || ||||| |||||||||||||||||||||||||||||||||    
T  34316888 ttaagggtcttgctagccattgccctcgggacaatggttaaggaagccaaaagtagcatgtttgcattgg 34316819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 232
Target Start/End: Original strand, 41956249 - 41956370
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||   |||  ||| || ||||||||   || |||||||||| |    
T  41956249 cattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaagccaatgcaaacatgctacttttgccttccttaaccattgc 41956348  T
Q  211 tctgaggacaatggttagcaag 232  Q
    ||||||| ||||| ||| ||||    
T  41956349 tctgagggcaatgattaacaag 41956370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 55669813 - 55669764
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  55669813 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 55669764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 35675227 - 35675319
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    ||||| |||| ||||||| |||| ||||||||||||||||||| |||| ||||||||||| |||  ||| ||||||||||| |||||||||||    
T  35675227 attgggaaatagtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacatactacttttgattttcttaac 35675319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 139 - 235
Target Start/End: Complemental strand, 40988259 - 40988163
Alignment:
Q  139 ttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggacaatggttagcaagacc 235  Q
    |||| ||||||||||||||||| |||||||||||||| ||||||||||| ||||| |||  ||||||||||  || |||||| || |||||||||||    
T  40988259 ttaattttttaaaagtcaaaacgttgttgaatttaatgtaaatatactatttttagtttctttaaccattatcctaaggacactgattagcaagacc 40988163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 19328963 - 19329022
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||||||    
T  19328963 gcattggaaaatggtgaaatgtgataaatttaactttttaaaagtcaaaatattgttgaa 19329022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 35808431 - 35808490
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||  ||||||||    
T  35808431 gcattggaaaattgtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaa 35808490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 114
Target Start/End: Original strand, 45688687 - 45688754
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcatt 114  Q
    |||||||||||||||||||||||  | ||||||||  |||||||||||||||||||||||||||||||    
T  45688687 ttaagggtcttgctaaccattgcattcagggcaatagttaaggaagccaaaagtagcatgtttgcatt 45688754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 64 - 115
Target Start/End: Original strand, 55669700 - 55669751
Alignment:
Q  64 cattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  55669700 cattgccctgagggcaatggttaaggaagccaaaagtagcatgtttgcattg 55669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 208
Target Start/End: Original strand, 31494704 - 31494794
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||||||||||| |||  |||||||||||||||| | ||||||||||||||||| ||| |||||||| |||||||  ||| ||||||||||    
T  31494704 aaatggtgaaaagtgaagaatttaactttttaaatgacaaaacattgttgaattcaatgtaaatatattacttttggtttccttaaccatt 31494794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 34016699 - 34016574
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||  |||||||| | |||  ||| || ||| |||||  |||||||| ||||     
T  34016699 gcattggaaaatggtgaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaacattctatttttagctttcttaatcatt- 34016601  T
Q  210 ctctgaggacaatggttagcaagaccc 236  Q
     ||| | | ||||||||||||||||||    
T  34016600 gtcttaaggcaatggttagcaagaccc 34016574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 2362573 - 2362642
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||| ||||||||||||| | ||||||||| ||||||||| ||||||||| |||||||||||||    
T  2362573 ttaagggtctcgctaaccattgccttcagggcaatggttaaggaagtcaaaagtagtatgtttgcattgg 2362642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 23690980 - 23691076
Alignment:
Q  136 aatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggacaatggttagcaaga 233  Q
    |||||||| |||||||| |||||||||||||||||| ||| ||||||||||| ||||  ||| |||||||||| |||| ||| || ||||||||||||    
T  23690980 aatttaaccttttaaaaatcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgctctaagg-cattggttagcaaga 23691076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 107 - 204
Target Start/End: Original strand, 35927306 - 35927403
Alignment:
Q  107 tttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||| |||| |||||||||| ||||  |||  ||||  ||||| ||||||||||    
T  35927306 tttgcattagaaaatggtgaaaaacgatgaatttaactttttaaaagttaaaatattgttgaatctaatgcaaagttactcattttagttttcttaac 35927403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 50514774 - 50514709
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||||||| || | ||||| |||||||| ||||||||||||||||||||||||    
T  50514774 gggtcttgctaaccattgccccgatgtcaatggttaaggaaaccaaaagtagcatgtttgcattgg 50514709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 23765527 - 23765591
Alignment:
Q  52 ggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||||||| ||| ||||  |||||||||| ||||||||||||||||||||||    
T  23765527 ggtcttgctaaccattgccctcaggacaattgttaaggaagctaaaagtagcatgtttgcattgg 23765591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 31010488 - 31010556
Alignment:
Q  136 aatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    ||||||||||||||||||||||||||||| ||||||  || ||||||| |||||||| |||||||||||    
T  31010488 aatttaactttttaaaagtcaaaacattgctgaattatatgtaaatatgctacttttgattttcttaac 31010556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 47188702 - 47188826
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||||||||||||||||| ||||||||||||||| | |||||||||||  ||||||||   |||  ||| || ||||||||   || |||||||||| |     
T  47188702 attggaaaatggtgaaaagtgataaatttaacttctaaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgcc 47188801  T
Q  212 ctgaggacaatggttagcaagaccc 236  Q
    |||| | ||||||||||||||||||    
T  47188802 ctgatggcaatggttagcaagaccc 47188826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 51266996 - 51266916
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||  |||||||| | |||| ||| || ||||||||    
T  51266996 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatacaaacatgctactttt 51266916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 26040523 - 26040456
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||| ||| || ||| || |||||||||||||||||||||| ||||||||||    
T  26040523 aagggtcttgctaaccattgtcctcagagcagtggttaaggaagccaaaagtagcatatttgcattgg 26040456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 45688817 - 45688691
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||| |||||| |||||| |||||||||||||||||||||||||||||  ||||||||  ||||  ||| || ||||||||   || |||||| |||     
T  45688817 gcattgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttggcttccttaactattg 45688718  T
Q  210 ctctgaggacaatggttagcaagaccc 236  Q
    | ||||   ||||||||||||||||||    
T  45688717 ccctgaatgcaatggttagcaagaccc 45688691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 31755010 - 31754953
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||| |||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  31755010 attgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 31754953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 36486723 - 36486820
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||| |||  ||||||| |||||||||||||||| ||| |||||||  || |||||||| ||| ||| |||| ||||| |||||    
T  36486723 attggaaaatggtgaaaagtgaagaatttaattttttaaaagtcaaaatattattgaattctatgtaaatatattacgtttgatttccttaatcatta 36486820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 113 - 170
Target Start/End: Complemental strand, 52341672 - 52341615
Alignment:
Q  113 ttggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    |||||||||| ||||||||||| ||||||||||||||||||||||||  |||||||||    
T  52341672 ttggaaaatgatgaaaaatgatgaatttaactttttaaaagtcaaaatgttgttgaat 52341615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 54339061 - 54339126
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||| || |||||| ||||||||| |||||||||||| ||| ||||||    
T  54339061 gggtcttgctaaccattgccctcagagcaatggttaaggaagtcaaaagtagcatatttacattgg 54339126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 3769889 - 3769805
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||||||| ||||||||||||| |||||||||| ||||||||||||| |||| |||||| |||| |||  |||  ||||||||||    
T  3769889 ttgcattgaaaaatggtgaaaagtgataaatttgactttttaaaagttaaaatattgttaaattcaatgcaaacctactactttt 3769805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 15986338 - 15986242
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||| ||||||||||||| || | ||||||| ||||||||||||| || ||||||||||| |||  ||| || ||||||||| ||| ||||||||||    
T  15986338 attgaaaaatggtgaaaagtggtgaatttaaatttttaaaagtcagaatattgttgaattcaatgcaaacattctacttttagtttccttaaccatt 15986242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 20811336 - 20811288
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    ||||||||| ||||||||| |||||||||||||||||||||||||||||    
T  20811336 cattggaaattggtgaaaagtgataaatttaactttttaaaagtcaaaa 20811288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 30475374 - 30475438
Alignment:
Q  52 ggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||||||| || |||||  ||||||||||||||||||  |||||||||||||    
T  30475374 ggtcttgctaaccattgccctcagagcaatagttaaggaagccaaaagtaatatgtttgcattgg 30475438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 46823544 - 46823488
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttga 168  Q
    |||||||||||||||||| | || |||||||||||||||||||||||| ||||||||    
T  46823544 attggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaaaattgttga 46823488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 48513691 - 48513595
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||| |||||| |||||| ||| | ||||||||||||||||||||||||||||||||||| |||  || ||||| | ||||  ||| ||||||||||    
T  48513691 attgaaaaatgatgaaaagtgaaagatttaactttttaaaagtcaaaacattgttgaattcaatgcaagtataccaattttggtttccttaaccatt 48513595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 2362703 - 2362577
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaa--ctttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||| ||||||||||||   ||||||||||||||||  ||||| ||   |||  ||| ||||||||||| | || ||||||||||     
T  2362703 attggaaaatggtgaaaagtgataaatttaattttttttaaaagtcaaaatgttgttaaaaccaatgcaaacatactacttttgacttccttaaccattg 2362604  T
Q  210 ctctgaggacaatggttagcaagaccc 236  Q
    | |||| | ||||||||||| ||||||    
T  2362603 ccctgaaggcaatggttagcgagaccc 2362577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 3472190 - 3472127
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaa 180  Q
    |||||||||| || || | ||||||||||||||||||| ||||||||||| |||||||||||||    
T  3472190 aaaatggtgacaagtgttgaatttaactttttaaaagttaaaacattgttaaatttaatataaa 3472127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 20456522 - 20456581
Alignment:
Q  56 ttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||||||||| ||| || ||||||||||||||||||  ||||||||||||||||||||||    
T  20456522 ttgctaaccagtgctcttagggcaatgattaaggaaatcaaaagtagcatgtttgcattg 20456581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 31168208 - 31168149
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||| |||||||||||| ||||| ||||||||||  ||||||||    
T  31168208 gcattggaaaatggtgaaaagtgataaatttaatttttttaaagtcaaaatgttgttgaa 31168149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 132 - 226
Target Start/End: Original strand, 9693528 - 9693622
Alignment:
Q  132 gataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggacaatggtt 226  Q
    |||||||||||||||||||||||| ||| |||||||||   |||  ||| || ||| |||| | || |||||||||| |||||||||||||||||    
T  9693528 gataaatttaactttttaaaagtcgaaatattgttgaaaccaatgcaaacatgctatttttgacttccttaaccattgctctgaggacaatggtt 9693622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 41956375 - 41956309
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||| |||| ||| ||||||||| || |||||| ||||||||| |||||||||||||||||||||||    
T  41956375 agggccttgttaatcattgccctcagagcaatggttaaggaaggcaaaagtagcatgtttgcattgg 41956309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 52895790 - 52895700
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||| ||||||| ||| || |||||||||||||||||||||||||  ||||| | ||| |||||||||||| |||  ||| ||||||||||    
T  52895790 aaattgtgaaaagtgaaaattttaactttttaaaagtcaaaacatgcttgaactcaatgtaaatatactacatttggtttccttaaccatt 52895700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 3684613 - 3684529
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaa 203  Q
    ||||| ||||||||||| ||||||||||||||||| | |||| ||| ||||||| |||||||| ||| |||||||  |||||||||    
T  3684613 aaatgatgaaaaatgatcaatttaactttttaaaaat-aaaaaattattgaattcaatataaacataatacttttggttttcttaa 3684529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 10100154 - 10100207
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||| | |||||||||||||||||||||||||||  ||||||||    
T  10100154 gaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgttgaa 10100207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 27839341 - 27839390
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||||||||    
T  27839341 gcattgaaaaatgatgaaaaatgataaatttaagtttttaaaagtcaaaa 27839390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 157
Target Start/End: Complemental strand, 32131214 - 32131169
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaa 157  Q
    ||||||||||||||| || |||||||||||||||||||||||||||    
T  32131214 attggaaaatggtgataagtgataaatttaactttttaaaagtcaa 32131169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 45088020 - 45088082
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||||||||||||    |||||||| |||||||| |||||||||| ||||||||||||    
T  45088020 aagggtcttgctaaccattgcc----gggcaatggttaaggaaaccaaaagtagtatgtttgcattg 45088082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 39158363 - 39158455
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    ||||| ||| |||||||| ||||  |||||||||||||||| | |||| |||||| |||| ||| |||| ||||||||||| |||| ||||||    
T  39158363 attgggaaagggtgaaaagtgatctatttaactttttaaaaattaaaatattgttcaattcaatgtaaacatactacttttgatttccttaac 39158455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 44478773 - 44478713
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaattt 172  Q
    |||||||||| ||||||||| ||  |||||||||||||||||| |||| ||||||||||||    
T  44478773 attggaaaattgtgaaaaataatggatttaactttttaaaagtaaaaaaattgttgaattt 44478713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 45088141 - 45088046
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    ||||||||||||| |||||| |||||||||||| ||||| ||||||||||   ||||||| | |||  ||| |||||||||||  ||| ||||||||||    
T  45088141 gcattggaaaatgatgaaaagtgataaatttaattttttgaaagtcaaaa---tgttgaaatcaatgcaaacatactacttttggtttccttaaccatt 45088046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 239
Target Start/End: Original strand, 50514649 - 50514777
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    ||||| |||||||| |||| |||||||||||||||||||||||| ||||  ||||||||   |||  ||| || ||||||||  ||| ||||||||||      
T  50514649 cattgaaaaatggtaaaaagtgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatgctacttttggtttccttaaccattga 50514748  T
Q  211 tctgaggacaatggttagcaagacccaaa 239  Q
      |  || |||||||||||||||||||||    
T  50514749 catcggggcaatggttagcaagacccaaa 50514777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 2940272 - 2940335
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    ||||||||| ||||||||||||||| |  |||| ||||||||||||| |||| |||||||||||    
T  2940272 ttgcattgggaaatggtgaaaaatggttgatttgactttttaaaagttaaaaaattgttgaatt 2940335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 19329086 - 19329024
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||| |||||||||     ||||| ||||||||| |||||||||||||||||||||||    
T  19329086 aagggtcttgctaatcattgccct-----caatggttaaggaaggcaaaagtagcatgtttgcattgg 19329024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 34316758 - 34316817
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaa-tttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||| ||||| ||||||| ||||||| |||||||||||||||||||||| |||||||||    
T  34316758 cattgaaaaatagtgaaaagtgataaaatttaactttttaaaagtcaaaatattgttgaa 34316817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 107 - 170
Target Start/End: Complemental strand, 52021109 - 52021046
Alignment:
Q  107 tttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    ||||||||| ||||  || |||||||||||||||||||||||||| || |||| ||||||||||    
T  52021109 tttgcattgaaaaactgtaaaaaatgataaatttaactttttaaatgttaaaatattgttgaat 52021046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 13498154 - 13498212
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    |||||||||| || || || ||| ||||||||||||||||||||||||| |||||||||    
T  13498154 attggaaaatagtaaagaacgatgaatttaactttttaaaagtcaaaactttgttgaat 13498212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 162
Target Start/End: Original strand, 35511217 - 35511267
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacat 162  Q
    |||||||||||||||||| |||| ||||| ||||||||||||| |||||||    
T  35511217 attggaaaatggtgaaaagtgatgaatttgactttttaaaagttaaaacat 35511267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 35808530 - 35808492
Alignment:
Q  78 caatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  35808530 caatggttaaggaagccaaaagtagcatgtttgcattgg 35808492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 33951772 - 33951715
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||| ||||||| |||||||||||||||||||||| | ||||  ||||||||    
T  33951772 attggaaaattgtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaa 33951715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 51266895 - 51266936
Alignment:
Q  74 agggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||||||||| ||||||||||||||||| ||||    
T  51266895 agggcaatgattaaggaagtcaaaagtagcatgtttgtattg 51266936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 966658 - 966562
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||||||| |||||| | |||||| || ||||||||||||||||| | |||| ||||||||||  |||  |||  |||||||||| |||| ||||||    
T  966658 ttgcattgaaaaatgataaaaaattatgaatttaactttttaaaaattaaaatattgttgaatccaatgaaaaactactacttttgatttccttaac 966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 149 - 237
Target Start/End: Original strand, 20435896 - 20435984
Alignment:
Q  149 aaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggacaatggttagcaagaccca 237  Q
    |||| |||||||||| ||||||| ||| ||||||||||| ||||| ||| ||||||||||    ||||  || ||||||||||||||||    
T  20435896 aaaaatcaaaacattattgaattcaatgtaaatatactatttttagtttccttaaccattgtcatgagagcactggttagcaagaccca 20435984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 26831946 - 26831882
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||||||| ||||   ||||||  |||| |||| ||||||||||||||||||||||    
T  26831946 gggtcttgctaaccattaccctcgtggcaatcgttaaagaagtcaaaagtagcatgtttgcattg 26831882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 176
Target Start/End: Original strand, 39418155 - 39418219
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaata 176  Q
    |||||| |||||| |||| |||||  ||| ||||||||||||| |||| ||||||||||||||||    
T  39418155 attggataatggtaaaaagtgatatgtttgactttttaaaagttaaaaaattgttgaatttaata 39418219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 40436148 - 40436096
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||||| |||||||||||||||||||  |||||| |||||||||    
T  40436148 aaaatgatgaaaaataataaatttaactttttaaatatcaaaatattgttgaa 40436096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 9693622 - 9693567
Alignment:
Q  61 aaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| ||| || |||||| ||||||||| ||||| |||||||||||||||||    
T  9693622 aaccattgtcctcagagcaatggttaaggaagtcaaaaatagcatgtttgcattgg 9693567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 31168081 - 31168147
Alignment:
Q  50 agggtcttgctaaccattgc-cctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||| || |||| ||||| |||| |||||||||||||| |||||| ||||||    
T  31168081 agggtcttgctaaccattgctcccgagg-caatggttaaagaagccaaaagtagaatgtttacattgg 31168147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 65 - 116
Target Start/End: Original strand, 33951662 - 33951713
Alignment:
Q  65 attgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| ||||||||| ||||||||||||||| || |||||||| |||||    
T  33951662 attgccctcagggcaatggttaaggaagccaaaattaacatgtttgtattgg 33951713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 49483169 - 49483110
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||||||||||||||||| ||||| |||| ||||||| ||||| |||| ||| |||||||    
T  49483169 attggaaaatggtgaaaagtgatagatttgactttttcaaagttaaaaaattattgaatt 49483110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 112 - 154
Target Start/End: Original strand, 11996140 - 11996182
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagt 154  Q
    |||||||||||||||||| ||||| |||||||||| |||||||    
T  11996140 attggaaaatggtgaaaagtgatagatttaactttctaaaagt 11996182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 154
Target Start/End: Complemental strand, 13966635 - 13966589
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagt 154  Q
    ||||||||||||||||| |||||| || ||||| |||||||||||||    
T  13966635 ttgcattggaaaatggtaaaaaataatgaatttgactttttaaaagt 13966589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 20435828 - 20435878
Alignment:
Q  113 ttggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacatt 163  Q
    ||||||||| ||||||| |||  ||||||||||||||||| ||||||||||    
T  20435828 ttggaaaattgtgaaaagtgaagaatttaactttttaaaaatcaaaacatt 20435878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 34016572 - 34016637
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||||||||||||||||||| ||| | | ||||||||||| |||| |||| ||| ||||||||||||    
T  34016572 aagggtcttgctaaccattg-ccttaagacaatgattaagaaagctaaaaatagaatgtttgcattg 34016637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Original strand, 1457586 - 1457631
Alignment:
Q  126 aaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||| |||||||||||| ||||||||||| |||| |||||||||||    
T  1457586 aaaattgataaatttaattttttaaaagttaaaatattgttgaatt 1457631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 149
Target Start/End: Original strand, 19876220 - 19876257
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaacttttta 149  Q
    |||||||||| ||||||| |||||||||||||||||||    
T  19876220 attggaaaatagtgaaaagtgataaatttaacttttta 19876257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 23260781 - 23260696
Alignment:
Q  108 ttgcattggaaaatggtgaaaaa-tgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    ||||||||  ||||||||||||  |||| ||||||||||||||||||| |||| ||| || |||| ||| ||||| |||| |||||    
T  23260781 ttgcattgagaaatggtgaaaagctgatgaatttaactttttaaaagttaaaatattattaaattcaatttaaatttacttctttt 23260696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 27839443 - 27839402
Alignment:
Q  75 gggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||| | ||||| |||||||||||||||||    
T  27839443 gggcaatgattaaggaggtcaaaaatagcatgtttgcattgg 27839402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 79 - 116
Target Start/End: Original strand, 31754914 - 31754951
Alignment:
Q  79 aatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||| ||||||||| |||||||||||||||||||||||    
T  31754914 aatggttaaggaagtcaaaagtagcatgtttgcattgg 31754951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 204
Target Start/End: Original strand, 37771154 - 37771234
Alignment:
Q  123 gtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||||||||||| ||||  ||||||||||||| |||| |||||| | | |||||||||  |||||| |||||||| ||||||    
T  37771154 gtgaaaaatgatgaattctactttttaaaagt-aaaaaattgtttattctaatataaaactactacatttaatttccttaac 37771234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Complemental strand, 50620756 - 50620715
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaa 91  Q
    |||||||||||||||| |||||| ||||||||| ||||||||    
T  50620756 agggtcttgctaaccaatgcccttagggcaatggttaaggaa 50620715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 11086419 - 11086379
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaagga 90  Q
    |||||||||||||||| |||||| ||||||||| |||||||    
T  11086419 agggtcttgctaaccagtgccctaagggcaatggttaagga 11086379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 20456641 - 20456545
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||| |||||| |||||| | || ||||||| |||||||| || |||| ||||||||||| |||  ||| || |||||||| |||| ||||| ||||    
T  20456641 attgaaaaatgatgaaaagttatgaatttaaatttttaaatgttaaaatattgttgaattcaatgcaaacatgctacttttgatttccttaatcatt 20456545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 20811239 - 20811275
Alignment:
Q  79 aatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||| |||| |||||||||||||||||||||||||||    
T  20811239 aatggttaaagaagccaaaagtagcatgtttgcattg 20811275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 197
Target Start/End: Complemental strand, 21760637 - 21760557
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattt 197  Q
    ||||| || |||||||||| ||||||||||| |||| | |||| ||| || |||| ||| ||||| ||| |||||||||||    
T  21760637 aaaatagtaaaaaatgatagatttaacttttgaaaaattaaaaaattattaaattcaatgtaaatttaccacttttaattt 21760557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 102
Target Start/End: Original strand, 27976844 - 27976896
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtag 102  Q
    ||||| |||||||| | |||||| |||||||||||||| ||| ||||||||||    
T  27976844 agggtgttgctaactagtgccctaagggcaatgattaaagaatccaaaagtag 27976896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 199 - 239
Target Start/End: Original strand, 49483027 - 49483067
Alignment:
Q  199 cttaaccattactctgaggacaatggttagcaagacccaaa 239  Q
    |||||||||||  ||||||||| ||||||||||||||||||    
T  49483027 cttaaccattatcctgaggacattggttagcaagacccaaa 49483067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 9e-34; HSPs: 73)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 43168213 - 43168088
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    ||||| |||||||||||| |||  | |||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |||| |||||||||| |     
T  43168213 attgggaaatggtgaaaagtgaagagtttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactacttttgatttccttaaccatttcc 43168114  T
Q  212 ctgaggacaatggttagcaagaccca 237  Q
    |||||| || ||||||||||||||||    
T  43168113 ctgagggcactggttagcaagaccca 43168088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 14331909 - 14331784
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    ||||| ||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||  ||| |||||||||| |     
T  14331909 attgggaaatggtgaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgcc 14331810  T
Q  212 ctgaggacaatggttagcaagaccca 237  Q
    |||||| ||  |||||||||||||||    
T  14331809 ctgagggcaccggttagcaagaccca 14331784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 8892805 - 8892902
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||| | |  ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||| |||||||||||    
T  8892805 attggaaaatggtgaaaagtaaagaatttaactttttaaaagtcaaaacattgttaaattcaatataaatatactacttttagtttccttaaccatta 8892902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 44359712 - 44359831
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgagg 217  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||  ||| |||||||||| | ||||||    
T  44359712 aaatggtgaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgccctgagg 44359811  T
Q  218 acaatggttagcaagaccca 237  Q
     || | ||||||||||||||    
T  44359812 gcactagttagcaagaccca 44359831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 116 - 237
Target Start/End: Complemental strand, 48938703 - 48938583
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctga 215  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||  ||| ||||||||||   ||||    
T  48938703 gaaaatggtgaaaagtgaaaaattta-ctttttaaaagtcaaaacattgttgaatttaatgtaaatatactacttttggtttccttaaccattgtcctga 48938605  T
Q  216 ggacaatggttagcaagaccca 237  Q
     | || ||||||| ||||||||    
T  48938604 tggcactggttagtaagaccca 48938583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 27209880 - 27209814
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  27209880 agggtcttgctaaccattgccctgagggcaatggttaaggaagccaaaagtaggatgtttgcattgg 27209814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 4940772 - 4940898
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||| ||   |||| ||| || ||| ||||  ||| |||||| |||     
T  4940772 gcattggaaaatggttaaaagtgataaatttaactttttaaaagtcaaaatattgttaaaaccaatacaaacatgctatttttggtttccttaactattg 4940871  T
Q  210 ctctgaggacaatggttagcaagaccc 236  Q
    | ||||||||| |||||||||||||||    
T  4940872 ccctgaggacagtggttagcaagaccc 4940898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 22346396 - 22346330
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||    
T  22346396 agggtcttgctaaccattgccttgaggacaatggttaaggaagccaaaagtagcatgtttgcattgg 22346330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 111 - 243
Target Start/End: Original strand, 27209754 - 27209886
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||   |||  ||| || ||||||||   || |||||||||| |    
T  27209754 cattggaaaatggtgaaaattgataaatttaactttttaaaagttaaaatgttgttgaaaccaatgcaaacatcctacttttggcttccttaaccattgc 27209853  T
Q  211 tctgaggacaatggttagcaagacccaaatttt 243  Q
     || ||| |||||||||||||||||| ||||||    
T  27209854 cctcagggcaatggttagcaagaccctaatttt 27209886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 112 - 235
Target Start/End: Complemental strand, 47895406 - 47895283
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||| ||||||||||||  ||||||||||||||||||||| ||||||| |||||||||  ||||  ||| ||  |||||||   || |||||||||| ||    
T  47895406 attgaaaaatggtgaaaggtgataaatttaactttttaaatgtcaaaatattgttgaaactaatgcaaacatgttacttttggcttccttaaccattgct 47895307  T
Q  212 ctgaggacaatggttagcaagacc 235  Q
    |||||||||||||||| |||||||    
T  47895306 ctgaggacaatggttaacaagacc 47895283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 111 - 204
Target Start/End: Original strand, 28850943 - 28851035
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||   |||  |||||| |||||||| | |||||||||    
T  28850943 cattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa-attgttgaaaccaatgcaaatatgctacttttgactttcttaac 28851035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 50 - 114
Target Start/End: Complemental strand, 7190634 - 7190570
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcatt 114  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||||||||||||    
T  7190634 agggtcttgctaaccattgcccttaggacaatggttaaggaagctaaaagtagcatgtttgcatt 7190570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 17403015 - 17402928
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||||||| |||| |||| |||||||||||||||||||||||| |||||||||| |||| ||||  ||||||||||  ||||||||||    
T  17403015 aaaatggtaaaaagtgatgaatttaactttttaaaagtcaaaatattgttgaatctaatgtaaaactactacttttggttttcttaac 17402928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 42607356 - 42607415
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  42607356 gcattgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaa 42607415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 11386055 - 11385957
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    ||||||||||||||| |||| |||||||||||||||||||||||||||||  ||||||||   |||  ||| || ||||||||  ||||||||||||||    
T  11386055 gcattggaaaatggtaaaaattgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggttttcttaaccatt 11385957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 50295467 - 50295524
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||    
T  50295467 attggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 50295524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 209
Target Start/End: Original strand, 932189 - 932288
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    ||||||||||||| |||||||| |||||||||| ||||||||||||||||  ||||||||  ||||  ||| || |||||||||  || |||||||||||    
T  932189 gcattggaaaatgatgaaaaattataaatttaattttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttaccttccttaaccatta 932288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 6170583 - 6170642
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||  ||||||||    
T  6170583 gcattggaaaatagagaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaa 6170642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 112 - 171
Target Start/End: Complemental strand, 16691366 - 16691307
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    ||||| ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||    
T  16691366 attgggaaatggtaaaaaatgaagaatttaactttttaaaagtcaaaacattgttgaatt 16691307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 117 - 203
Target Start/End: Complemental strand, 27210792 - 27210705
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaaca-ttgttgaatttaatataaatatactacttttaattttcttaa 203  Q
    |||||||||||||||||| ||||||||||||||||||| |||| | ||||||||||||||  |||| || ||||||| |||| |||||    
T  27210792 aaaatggtgaaaaatgatcaatttaactttttaaaagttaaaaaagttgttgaatttaatgcaaatttattacttttgatttacttaa 27210705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 34874641 - 34874582
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||| |||||||||||| ||||||||||||||||  ||||||||    
T  34874641 gcattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaa 34874582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 41147510 - 41147569
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||||||| |||||||||    
T  41147510 gcattgaaaaatggtaaaaaatgattaatttaactttttaaaagtcaaaatattgttgaa 41147569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 47655403 - 47655462
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  47655403 gcattgaaaaatggtgaaaattgataaatttaactttttaaaagtcaaaatgttgttgaa 47655462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 49508893 - 49508826
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||| |||||||| | | ||||| |||| ||||||||||||||||||||||||||||    
T  49508893 aagggtcttgctaactattgccctcaagacaatggttaaagaagccaaaagtagcatgtttgcattgg 49508826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 192
Target Start/End: Original strand, 25177489 - 25177563
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||| |||||||||||  || |||| ||||||||||||||||||| |||||||| ||| ||||||||||||||||    
T  25177489 aaatagtgaaaaatgaagaaattaattttttaaaagtcaaaacatcgttgaattcaatgtaaatatactactttt 25177563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 32213922 - 32213980
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||  ||||||||    
T  32213922 cattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaa 32213980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 117 - 235
Target Start/End: Complemental strand, 43433842 - 43433724
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgag 216  Q
    ||||||||||||| |||||||||||||||||||||| | ||||  ||||||||   |||| ||| |||||||||||   || |||||||||||| || |     
T  43433842 aaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaaaccaatacaaacatactacttttggcttccttaaccattaccctcaa 43433743  T
Q  217 gacaatggttagcaagacc 235  Q
    | |||| ||||||||||||    
T  43433742 ggcaatagttagcaagacc 43433724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 11385844 - 11385901
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||| | |||||||||||||||||||||||||||  ||||||||    
T  11385844 attggaaaatggtgaaaagttataaatttaactttttaaaagtcaaaatgttgttgaa 11385901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 22346271 - 22346328
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||| ||||||||||||| |||||||||||| |||||||||||||||| |||||||||    
T  22346271 attgaaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatattgttgaa 22346328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 203
Target Start/End: Original strand, 26469614 - 26469707
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaa 203  Q
    |||||| |||||  |||||||||||||||||||||||||||||||||||| ||| |||||   |||  ||| ||||||||||||| || |||||    
T  26469614 gcattgaaaaataatgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaaccaatgaaaacatactacttttaacttccttaa 26469707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 40845323 - 40845266
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||| ||||||||||||| |||||||||||||||||||||| |||||| |||||||||    
T  40845323 attgaaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaatattgttgaa 40845266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 49901998 - 49901941
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||| ||||||||||||||||||||| || ||||| ||||||||    
T  49901998 attggaaaatggtgaaaagtgataaatttaactttttaaacgttaaaacgttgttgaa 49901941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 43433724 - 43433788
Alignment:
Q  52 ggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||| |||||| |||||| |||| ||||||||||||||||||| ||||||| |||||    
T  43433724 ggtcttgctaactattgccttgagggtaatggttaaggaagccaaaagtagtatgtttgtattgg 43433788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 7190514 - 7190633
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgag 216  Q
    |||||| |||||| |||||||||||||||||||||||| ||||   |||||||  ||||  ||| || |||||||||  || ||||||||||   || ||    
T  7190514 aaaatgatgaaaagtgataaatttaactttttaaaagttaaaatggtgttgaaactaatgcaaacatgctacttttagcttccttaaccattgtcctaag 7190613  T
Q  217 gacaatggttagcaagaccc 236  Q
    | ||||||||||||||||||    
T  7190614 ggcaatggttagcaagaccc 7190633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 118 - 193
Target Start/End: Original strand, 21268335 - 21268409
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttta 193  Q
    |||||||||||||||||| ||||||| |||||||||| |||| ||||||||||| |||| |||| ||||| |||||    
T  21268335 aaatggtgaaaaatgatagatttaac-ttttaaaagttaaaaaattgttgaattcaatacaaatttactattttta 21268409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 33930040 - 33929981
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| ||||| ||||||| |||||||||||||||||||||||||||||  ||||||||    
T  33930040 gcattgaaaaatagtgaaaactgataaatttaactttttaaaagtcaaaatgttgttgaa 33929981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 165
Target Start/End: Original strand, 49508766 - 49508820
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgt 165  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||| |||||    
T  49508766 gcattggaaaatggtgaaag-tgataaatttaactttttaaaagtcaaaatattgt 49508820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 6170710 - 6170644
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| ||| |||||||||| | ||||||| ||||||||| |||||||| ||||||||||||||    
T  6170710 agggtcttactatccattgcccttaaggcaatggttaaggaagtcaaaagtaacatgtttgcattgg 6170644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 47895283 - 47895345
Alignment:
Q  52 ggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcatt 114  Q
    ||||||| ||||||||| ||| || |||||| |||||||||||||||||| ||||||||||||    
T  47895283 ggtcttgttaaccattgtcctcagagcaatggttaaggaagccaaaagtaacatgtttgcatt 47895345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 2125739 - 2125788
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||| ||||| ||||||| |||||||||||||||||||||||||||||    
T  2125739 gcattgaaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaa 2125788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 189
Target Start/End: Original strand, 41898893 - 41898970
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactact 189  Q
    |||| |||||||| |||| |||| ||||||||||||||||||| |||| |||||||||||  ||||||| || |||||    
T  41898893 attgaaaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattccatataaacatgctact 41898970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 45721825 - 45721777
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||||||| |||| |||||||||||||||||||||| ||||||    
T  45721825 cattggaaaatggtaaaaactgataaatttaactttttaaaaatcaaaa 45721777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 170
Target Start/End: Original strand, 46296233 - 46296277
Alignment:
Q  126 aaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    |||||| ||||||||||||||||||||||||||| ||||||||||    
T  46296233 aaaaataataaatttaactttttaaaagtcaaaatattgttgaat 46296277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 4940900 - 4940833
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||| || ||| ||||||||  |||||||| |||||| ||||||||||| |||||    
T  4940900 aagggtcttgctaaccactgtcctcagggcaatagttaaggaaaccaaaaatagcatgtttgtattgg 4940833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 117 - 236
Target Start/End: Complemental strand, 32268076 - 32267957
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaattt--aatataaatatactacttttaattttcttaaccattactctg 214  Q
    ||||||||||||| || | |||| |||||| |||||||||||| |||||  |||||  ||  ||||  ||||||||||| ||| |||||||||||  |||    
T  32268076 aaaatggtgaaaagtgttgaattcaactttctaaaagtcaaaaaattgt--aatttccaacgtaaaactactacttttagtttccttaaccattatcctg 32267979  T
Q  215 aggacaatggttagcaagaccc 236  Q
    ||| || |||||||||||||||    
T  32267978 agggcactggttagcaagaccc 32267957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 157
Target Start/End: Complemental strand, 5945493 - 5945447
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaa 157  Q
    ||||| ||||||||||||| |||||||||| ||||||||||||||||    
T  5945493 cattgaaaaatggtgaaaagtgataaattttactttttaaaagtcaa 5945447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 8244044 - 8244110
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||| ||||||||| |  ||||||||| ||||||||||||||| || ||||||| ||||||    
T  8244044 agggtcttgcaaaccattgcacccagggcaatggttaaggaagccaaaaataacatgtttccattgg 8244110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 24140744 - 24140786
Alignment:
Q  74 agggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||| ||||||||||||||| |||||||||||||||||    
T  24140744 agggcaatggttaaggaagccaaaaatagcatgtttgcattgg 24140786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 126 - 208
Target Start/End: Complemental strand, 52396501 - 52396419
Alignment:
Q  126 aaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||| ||||||||||||||||||||||||||||| ||| |||||   |||  ||| || ||| ||||||||| ||||||||||    
T  52396501 aaaagtgataaatttaactttttaaaagtcaaaatattattgaaacaaatgcaaacatgctatttttaatttccttaaccatt 52396419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 24140845 - 24140788
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||  ||||||| |||||||||| ||||||||||  ||||||||    
T  24140845 attggaaaatggtgaaacgtgataaacttaacttttttaaagtcaaaatgttgttgaa 24140788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 41147612 - 41147571
Alignment:
Q  75 gggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| ||||||||| |||||||||||||||||||||||    
T  41147612 gggcaatggttaaggaagtcaaaagtagcatgtttgcattgg 41147571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 117 - 234
Target Start/End: Original strand, 51046683 - 51046800
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgag 216  Q
    ||||||||||||| || | |||| |||||||||||||||||||  ||||    |  |||  |||  ||||||||||||||| ||||| |||| |||||||    
T  51046683 aaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaaagttgtcatttccaatgcaaaactactacttttaatttccttaatcattgctctgag 51046782  T
Q  217 gacaatggttagcaagac 234  Q
    |||| || ||||||||||    
T  51046783 gacactgattagcaagac 51046800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 33929947 - 33929979
Alignment:
Q  84 ttaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||||||||||||||    
T  33929947 ttaaggaagccaaaagtagcatgtttgcattgg 33929979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 34874548 - 34874580
Alignment:
Q  84 ttaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||||||||||||||    
T  34874548 ttaaggaagccaaaagtagcatgtttgcattgg 34874580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 10832240 - 10832299
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||||||||||||||||| || || |||| | ||||||||||| |||| |||||||||||    
T  10832240 attggaaaatggtgaaaattgctagatttgattttttaaaagttaaaaaattgttgaatt 10832299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 50154547 - 50154488
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||| | |||||||||||||||||| |||||||||| ||||  ||||||||    
T  50154547 gcattgaaaaatgataaaaaatgataaatttaaccttttaaaagttaaaatgttgttgaa 50154488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 4656089 - 4656031
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||| || |||| |||||||||||||||||||||| | ||||  ||||||||    
T  4656089 cattggaaaatagtaaaaagtgataaatttaactttttaaaaattaaaatgttgttgaa 4656031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 84 - 114
Target Start/End: Complemental strand, 9055937 - 9055907
Alignment:
Q  84 ttaaggaagccaaaagtagcatgtttgcatt 114  Q
    |||||||||||||||||||||||||||||||    
T  9055937 ttaaggaagccaaaagtagcatgtttgcatt 9055907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 45721701 - 45721767
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||| ||||||| ||||||  ||| | ||||||| ||||||||  ||||||||||||||||||||||    
T  45721701 aaggttcttgctgaccatttaccttatggcaatggttaaggaaatcaaaagtagcatgtttgcattg 45721767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 50154444 - 50154486
Alignment:
Q  74 agggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||| |||| |||||||||||||||||| ||||||||||||||    
T  50154444 agggtaatggttaaggaagccaaaagtaacatgtttgcattgg 50154486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 51424215 - 51424149
Alignment:
Q  126 aaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||| |||| |||||||||||||||| || |||||||||||||||  ||| |||| ||| |||||||    
T  51424215 aaaagtgatgaatttaactttttaaaggttaaaacattgttgaatccaatgtaaacatattactttt 51424149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 11385953 - 11385994
Alignment:
Q  75 gggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| ||||| || ||||||||||||||||||||||||    
T  11385953 gggcaatggttaagaaaaccaaaagtagcatgtttgcattgg 11385994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 107 - 176
Target Start/End: Original strand, 27935051 - 27935120
Alignment:
Q  107 tttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaata 176  Q
    |||| |||||||||||||||||||| ||  |||| | |||||||||||  ||| ||||||||||| ||||    
T  27935051 tttgtattggaaaatggtgaaaaataatggatttgattttttaaaagttcaaaaattgttgaattcaata 27935120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 152
Target Start/End: Complemental strand, 44286933 - 44286904
Alignment:
Q  123 gtgaaaaatgataaatttaactttttaaaa 152  Q
    ||||||||||||||||||||||||||||||    
T  44286933 gtgaaaaatgataaatttaactttttaaaa 44286904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 14331785 - 14331849
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||||  |||||| ||||||||| |||||||| |||||| ||| || ||| |||||    
T  14331785 gggtcttgctaaccggtgccctcagggcaatggttaaggaaaccaaaaatagtatatttacattg 14331849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 87
Target Start/End: Original strand, 26701492 - 26701532
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaa 87  Q
    |||||||||||||||||||||| ||| ||||||||| ||||    
T  26701492 ttaagggtcttgctaaccattgtcctaagggcaatggttaa 26701532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 27160139 - 27160207
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    ||||||||||| ||||| |||||| |||||| |||| || |||||||| ||| ||||  ||||||||||    
T  27160139 tgaaaaatgatgaatttgacttttcaaaagttaaaatatagttgaattcaatgtaaacctactactttt 27160207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 29966803 - 29966835
Alignment:
Q  84 ttaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||| |||||||||||||||||||||||    
T  29966803 ttaaggaagtcaaaagtagcatgtttgcattgg 29966835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 29966897 - 29966837
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaa-ctttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||||  |||||||||||||||||  ||||| |||||||||| |||||||||    
T  29966897 gcattgaaaaatggcaaaaaatgataaatttaattttttttaaagtcaaaatattgttgaa 29966837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 43168089 - 43168153
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||||| |||||| |||| |||| ||||||||  ||||||||| || ||| |||||    
T  43168089 gggtcttgctaaccagtgccctcagggaaatggttaaggaaatcaaaagtagtatatttacattg 43168153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 44359830 - 44359766
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||| | |||||| ||||||||| |||||||| |||||| ||| || ||| |||||    
T  44359830 gggtcttgctaactagtgccctcagggcaatggttaaggaaaccaaaaatagtatatttacattg 44359766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 50 - 90
Target Start/End: Complemental strand, 44603775 - 44603735
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaagga 90  Q
    |||||||||||||||| |||||| ||||||||| |||||||    
T  44603775 agggtcttgctaaccagtgccctaagggcaatggttaagga 44603735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 116
Target Start/End: Original strand, 49901907 - 49901939
Alignment:
Q  84 ttaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||| ||||||||||||||    
T  49901907 ttaaggaagccaaaagtatcatgtttgcattgg 49901939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 66; Significance: 6e-29; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 16931939 - 16931838
Alignment:
Q  136 aatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggacaatggttagcaagacc 235  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||  ||||||||||||||| |  ||||||| ||||||||||||||    
T  16931939 aatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatactatttttggttttcttaaccattatttcgaggacactggttagcaagacc 16931840  T
Q  236 ca 237  Q
    ||    
T  16931839 ca 16931838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 136 - 237
Target Start/End: Complemental strand, 16937322 - 16937221
Alignment:
Q  136 aatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggacaatggttagcaagacc 235  Q
    |||||||||||||||||||||||| ||||||||||||||| ||||||||||| ||||  ||||||||||||||| |  ||||||| ||||||||||||||    
T  16937322 aatttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatactatttttggttttcttaaccattatttcgaggacactggttagcaagacc 16937223  T
Q  236 ca 237  Q
    ||    
T  16937222 ca 16937221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 30388697 - 30388821
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | |||||||| ||||||||||| | ||  |||||||||||     
T  30388697 attgaaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatattattgaaatcaatataaacatactacttttgacttctttaaccattac- 30388795  T
Q  212 ctgaggacaatggttagcaagaccca 237  Q
    | |||| ||||||||| | |||||||    
T  30388796 cagagggcaatggttaacgagaccca 30388821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 118 - 208
Target Start/End: Complemental strand, 34835930 - 34835840
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    ||||| ||||||||||  ||||||||||||||||||| |||| |||||| |||| ||||||||||||||||||||||||| ||||| ||||    
T  34835930 aaatgatgaaaaatgaagaatttaactttttaaaagttaaaatattgttaaattcaatataaatatactacttttaatttccttaatcatt 34835840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 1910317 - 1910192
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    |||| ||||||||||||||||||||||||||||||||||||||| ||||  ||||||||   ||| |||| || |||||||| | ||  ||||||||| |    
T  1910317 cattagaaaatggtgaaaaatgataaatttaactttttaaaagttaaaatgttgttgaaacaaatgtaaacatgctacttttgacttctttaaccattgc 1910218  T
Q  211 tctgaggacaatggttagcaagaccc 236  Q
     |||| | ||||||||||||||||||    
T  1910217 cctgatggcaatggttagcaagaccc 1910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 42222293 - 42222197
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||   |||| ||| ||  |||||||| ||| ||||||||||    
T  42222293 attggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaaccaatacaaacatgttacttttagtttccttaaccatt 42222197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 48879742 - 48879646
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    ||||| |||| ||||||| |||  ||||||| ||||||||||| |||| ||||||||||||||| ||||||| |||||||| |||||||||||||||    
T  48879742 attgggaaatagtgaaaagtgaagaatttaattttttaaaagttaaaatattgttgaatttaatgtaaatatgctacttttgattttcttaaccatt 48879646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 118 - 235
Target Start/End: Original strand, 10575802 - 10575919
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgagg 217  Q
    |||||||||||| ||| |||||||||||||||||| || ||| ||||||||||| |||  ||||||||||||||| ||||  ||||||||| | | ||||    
T  10575802 aaatggtgaaaagtgaaaaatttaactttttaaaactccaaatattgttgaattcaatgaaaatatactacttttgatttctttaaccattgccccgagg 10575901  T
Q  218 acaatggttagcaagacc 235  Q
     || |||| |||||||||    
T  10575902 gcactggtgagcaagacc 10575919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 29687424 - 29687489
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||| | ||||||  |||||||||||||||||||||||||||||||||    
T  29687424 gggtcttgctaaccattgccctcaaggcaatacttaaggaagccaaaagtagcatgtttgcattgg 29687489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 7322995 - 7323115
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgag 216  Q
    ||||||||||||| |||||||||||| ||||||||||||||||  ||||||||   |||  ||| || |||||||| | ||  ||||||||| |||| ||    
T  7322995 aaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgacttctttaaccattgctctcag 7323094  T
Q  217 gacaatggttagcaagaccca 237  Q
    ||||||| |||||||||||||    
T  7323095 gacaatgattagcaagaccca 7323115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 29034759 - 29034663
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||  ||||  ||| || ||||||||   |||||||||||||    
T  29034759 attggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttggctttcttaaccatt 29034663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 49069627 - 49069503
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||| ||||||||||||| |||||||| ||||||||||||| |||| | |||||||||   |||| ||| ||  |||||||  ||| ||||||||||| |    
T  49069627 attgaaaaatggtgaaaagtgataaatctaactttttaaaaatcaatatattgttgaaaccaatacaaacatgttacttttggtttccttaaccattatt 49069528  T
Q  212 ctgaggacaatggttagcaagaccc 236  Q
    ||||||||| |||||||||| ||||    
T  49069527 ctgaggacactggttagcaaaaccc 49069503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 8292819 - 8292693
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||||| | ||||||||  |||||||||||||||||  |||||||| | |||  ||| || |||||||| | || ||||||||||     
T  8292819 gcattggaaaatggtgaaaagttataaatttgcctttttaaaagtcaaaatgttgttgaaatcaatccaaacatgctacttttgacttccttaaccattg 8292720  T
Q  210 ctctgaggacaatggttagcaagaccc 236  Q
    | || | ||||||||||||||| ||||    
T  8292719 ccctcacgacaatggttagcaaaaccc 8292693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 27053534 - 27053587
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  27053534 gaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 27053587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 43567543 - 43567600
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  43567543 attggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 43567600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 8292689 - 8292757
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||||||| ||||||||||||| | ||||||||||| ||||||||| ||||||||||||||||| ||||    
T  8292689 ttaagggttttgctaaccattgtcgtgagggcaatggttaaggaagtcaaaagtagcatgtttggattg 8292757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 138 - 242
Target Start/End: Complemental strand, 16957711 - 16957608
Alignment:
Q  138 tttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggacaatggttagcaagaccca 237  Q
    |||||||||||||||||||||| ||||||||||||||| |||||||| |||||||   || |||||||||| |  ||||| ||  |||||||||||||||    
T  16957711 tttaactttttaaaagtcaaaatattgttgaatttaatgtaaatatattactttt-ggttccttaaccattgccatgagggcaccggttagcaagaccca 16957613  T
Q  238 aattt 242  Q
     ||||    
T  16957612 tattt 16957608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 198
Target Start/End: Original strand, 27236848 - 27236932
Alignment:
Q  114 tggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaatttt 198  Q
    ||||||||| |||||||||||| |||| |||| |||||||| |||| ||||||||||| |||| |||| ||||| ||||||||||    
T  27236848 tggaaaatgatgaaaaatgatagatttgacttcttaaaagttaaaaaattgttgaattcaatacaaatttactatttttaatttt 27236932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 36279193 - 36279098
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||||||   ||||||| |||||  ||| || ||||||||   |||||||||||||    
T  36279193 gcattggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaa---tgttgaaattaatgcaaacatgctacttttgcctttcttaaccatt 36279098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 3720147 - 3720242
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaa 203  Q
    ||||||||  |||||||| |||||||||||||||||||||||||||| |||||||| ||||||  | || |||| ||||| |||| |||| |||||    
T  3720147 ttgcattgacaaatggtgtaaaatgataaatttaactttttaaaagttaaaacattcttgaatccattacaaatctactattttttatttccttaa 3720242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 8380515 - 8380456
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||  ||||||||    
T  8380515 gcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 8380456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 3681767 - 3681709
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||    
T  3681767 cattggaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 3681709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 1910190 - 1910255
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcatt 114  Q
    |||||||||||||||||||||| | ||||||||| |||| |||| |||||||||||||||| ||||    
T  1910190 aagggtcttgctaaccattgccatcagggcaatggttaaagaagtcaaaagtagcatgtttacatt 1910255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 7323114 - 7323049
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||| ||||| |||||| |||||| |||| |||| |||||||||||||||||||||||    
T  7323114 gggtcttgctaatcattgtcctgagagcaatggttaaagaagtcaaaagtagcatgtttgcattgg 7323049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 8258799 - 8258734
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||| || ||||||||||  |||| ||||||||| |||||||||||||    
T  8258799 gggtcttgctaaccattgcccttagtgcaatgattattgaaggcaaaagtagtatgtttgcattgg 8258734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 41188821 - 41188870
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||||||||||||  |||||||||||||||||||||||||||||    
T  41188821 gcattggaaaatggtgaaaggtgataaatttaactttttaaaagtcaaaa 41188870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 5348008 - 5348056
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  5348008 cattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaa 5348056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Original strand, 48454858 - 48454906
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||| |||||||||||| |||||||||||||||||||||||||||||    
T  48454858 cattgggaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 48454906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 5240369 - 5240416
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||    
T  5240369 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 5240416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 22521660 - 22521562
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    ||||||||||||| ||| || ||||||||||||||| |||||||||||||  ||||||||   |||  ||| || |||||||| | |||||||||||||    
T  22521660 gcattggaaaatgatgagaagtgataaatttaacttcttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttgactttcttaaccatt 22521562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 40763322 - 40763264
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||| ||||||||||||| |||||||||||||||||||||||| ||||  ||||||||    
T  40763322 cattgaaaaatggtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 40763264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 5240493 - 5240428
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||| |||||||| |||| | | | ||||| |||||||||||||||||||||||||||||||||    
T  5240493 gggtctcgctaaccaatgcctttaagacaatggttaaggaagccaaaagtagcatgtttgcattgg 5240428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 4686080 - 4686172
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||| ||||||||||||| |||| ||||||||||||||||||| |||| | ||||||||| || | |||  |||||||| | |||| ||||||    
T  4686080 attgaaaaatggtgaaaagtgattaatttaactttttaaaagttaaaaaagtgttgaattcaagacaaacttactacttatgatttccttaac 4686172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 6548603 - 6548547
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttg 167  Q
    |||||| ||| ||||||||||||| ||||||||||||||||||| |||| |||||||    
T  6548603 cattgggaaacggtgaaaaatgatgaatttaactttttaaaagttaaaatattgttg 6548547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 113 - 169
Target Start/End: Complemental strand, 29687547 - 29687491
Alignment:
Q  113 ttggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||||||| |||| ||||||||||||||||||| ||||  ||||||||    
T  29687547 ttggaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatgttgttgaa 29687491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 60 - 116
Target Start/End: Original strand, 29959024 - 29959080
Alignment:
Q  60 taaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||| |||||| |||||||||||||| |||||||||  |||||||||||||    
T  29959024 taaccattgctctgaggacaatgattaaggaaaccaaaagtattatgtttgcattgg 29959080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 35404307 - 35404383
Alignment:
Q  128 aaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    ||||||| ||||||||||||||||||| |||| || ||||||| |||| ||||  |||||||||| |||| ||||||    
T  35404307 aaatgatgaatttaactttttaaaagttaaaatatcgttgaatctaatgtaaacctactacttttgatttccttaac 35404383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 40066954 - 40066994
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaa 152  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  40066954 attgaaaaatggtgaaaaatgataaatttaactttttaaaa 40066994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 30538521 - 30538564
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||| |||||||||||||||||||||||||||||| ||||||    
T  30538521 gaaaatagtgaaaaatgataaatttaactttttaaaaatcaaaa 30538564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 45 - 114
Target Start/End: Original strand, 36279067 - 36279133
Alignment:
Q  45 acttaagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcatt 114  Q
    ||||| |||||||| ||||||||||||   |||||||| ||||| ||| |||||||||||||||||||||    
T  36279067 acttatgggtcttgttaaccattgccc---gggcaatggttaagaaaggcaaaagtagcatgtttgcatt 36279133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 40774275 - 40774338
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||||||| |||||| |||||| |||| ||||||||||||||||||| |||| |||| ||||||    
T  40774275 ttgcattgaaaaatgatgaaaattgatgaatttaactttttaaaagttaaaatattgatgaatt 40774338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 116 - 159
Target Start/End: Original strand, 43958124 - 43958167
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||| |||||||||||||||||||| ||||||||||||||||    
T  43958124 gaaaattgtgaaaaatgataaatttaattttttaaaagtcaaaa 43958167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 89
Target Start/End: Complemental strand, 16492182 - 16492144
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaagg 89  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  16492182 gggtcttgctaaccattgcccttagggcaatgattaagg 16492144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 32204258 - 32204196
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    |||||||| |||||| |||||| |||| ||||||||||||||||||| |||| ||| ||||||    
T  32204258 ttgcattgaaaaatgatgaaaagtgatgaatttaactttttaaaagttaaaatatttttgaat 32204196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 46478607 - 46478649
Alignment:
Q  127 aaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||||||||||| |||| |||||||||    
T  46478607 aaaatgataaatttaactttttaaaagttaaaatattgttgaa 46478649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 5543112 - 5543059
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||||||||||| ||||| |||| ||||||||||||| |||| |||||||||||    
T  5543112 aaatggtgaaaagtgatatatttgactttttaaaagttaaaaaattgttgaatt 5543059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 8258675 - 8258732
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||| ||  ||||||||    
T  8258675 attgaaaaatggtgaaaagtgataaatttaactttttaatagtcataattttgttgaa 8258732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 5348097 - 5348065
Alignment:
Q  84 ttaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||||||||||||||    
T  5348097 ttaaggaagccaaaagtagcatgtttgcattgg 5348065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 22707123 - 22707079
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagt 154  Q
    ||||||||||||  ||||||||||||||||| |||||||||||||    
T  22707123 gcattggaaaataatgaaaaatgataaattttactttttaaaagt 22707079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 24359836 - 24359804
Alignment:
Q  84 ttaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||||||||||||||    
T  24359836 ttaaggaagccaaaagtagcatgtttgcattgg 24359804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 29034658 - 29034698
Alignment:
Q  74 agggcaatgattaaggaagccaaaagtagcatgtttgcatt 114  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  29034658 agggcaatggttaagaaagccaaaagtagcatgtttgcatt 29034698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 139 - 171
Target Start/End: Complemental strand, 29247968 - 29247936
Alignment:
Q  139 ttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||||||||||||||||||||||||||||||||    
T  29247968 ttaactttttaaaagtcaaaacattgttgaatt 29247936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 31626083 - 31626135
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||| |||||||||||||||||||||| ||||||  ||||||||    
T  31626083 aaaatgatgaaaagtgataaatttaactttttaaaaatcaaaatgttgttgaa 31626135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 41141096 - 41141040
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttga 168  Q
    |||||||||||||||||| |  | ||||||||||||||||| |||||| ||||||||    
T  41141096 attggaaaatggtgaaaagttgttaatttaactttttaaaaatcaaaaaattgttga 41141040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 5977757 - 5977812
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaattt 172  Q
    ||||| ||||||| ||||  |||||||||||||||||| |||| ||||||||||||    
T  5977757 aaaatagtgaaaagtgatggatttaactttttaaaagttaaaaaattgttgaattt 5977812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 8380411 - 8380454
Alignment:
Q  73 gagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||| ||||||||||||||||||| |||||| ||||||    
T  8380411 gagggcaatggttaaggaagccaaaagtagtatgttttcattgg 8380454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 169
Target Start/End: Original strand, 24359747 - 24359802
Alignment:
Q  114 tggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||| ||||  ||||||||||||||||||||||| ||||  ||||||||    
T  24359747 tggaaaatggtaaaaagggataaatttaactttttaaaagttaaaatgttgttgaa 24359802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 171
Target Start/End: Complemental strand, 35003673 - 35003618
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||||||||||||| |||| ||||||||||||||||| | |||| | |||||||||    
T  35003673 gaaaatggtgaaaagtgattaatttaactttttaaaaattaaaaaagtgttgaatt 35003618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 202
Target Start/End: Original strand, 41769690 - 41769776
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaacttt-ttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttctta 202  Q
    ||||||||||||| ||   ||||||| ||| ||||||||||||||||||||||||| ||| | ||||||| | |||| |||| ||||    
T  41769690 aaaatggtgaaaagtggagaatttaattttattaaaagtcaaaacattgttgaattcaatgttaatataccattttttatttcctta 41769776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 45724863 - 45724805
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgtt 166  Q
    ||||||||| ||||||||||||||||| ||||| || |||| ||||| |||| ||||||    
T  45724863 ttgcattgggaaatggtgaaaaatgattaatttgacattttcaaagtgaaaatattgtt 45724805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Original strand, 14718167 - 14718224
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaat 181  Q
    |||||||| || ||||||||||||||||||| |||| ||| ||||||| |||| ||||    
T  14718167 tgaaaaataatgaatttaactttttaaaagttaaaatattattgaattcaatacaaat 14718224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 204
Target Start/End: Original strand, 18800204 - 18800277
Alignment:
Q  131 tgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||||||||||||||||||||| | | || ||||||||||  | || |||  |||||||||| |||||||||||    
T  18800204 tgataaatttaactttttaaaaattacaatattgttgaatccattacaaacttactacttttgattttcttaac 18800277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 154
Target Start/End: Original strand, 21577685 - 21577722
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagt 154  Q
    |||||||||||||||||  |||||||||||||||||||    
T  21577685 aaaatggtgaaaaatgaataatttaactttttaaaagt 21577722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 40194886 - 40194841
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||||||||| ||||||||||||||||  ||||||||    
T  40194886 tgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaa 40194841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 169
Target Start/End: Complemental strand, 46042816 - 46042763
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||| | |||||||||||||||| |||||| |||  ||||||||    
T  46042816 gaaaatggtgaaaagttataaatttaacttttttaaagtctaaatgttgttgaa 46042763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 3408139 - 3408207
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattggaaa 119  Q
    ||||||||||||||||||| || ||| ||||| |||||| |||||||| ||| |  ||| |||||||||    
T  3408139 gggtcttgctaaccattgctctcaggacaatggttaaggtagccaaaattagtagctttacattggaaa 3408207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 116 - 192
Target Start/End: Original strand, 16082473 - 16082549
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||||||||||||| |||| |||||||| |||||||||| ||   ||||||||||  |||  ||| |||||||||||    
T  16082473 gaaaatggtgaaaattgatgaatttaacgttttaaaagttaagttattgttgaatccaatgcaaacatactactttt 16082549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 24937976 - 24937936
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaa 91  Q
    ||||||||||||||| |||||| ||||||||| ||||||||    
T  24937976 gggtcttgctaaccagtgccctcagggcaatggttaaggaa 24937936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 139 - 203
Target Start/End: Original strand, 42552535 - 42552599
Alignment:
Q  139 ttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaa 203  Q
    ||||||||||||||||||||| |||||| |||| |||  ||| ||| ||||||| ||||| ||||    
T  42552535 ttaactttttaaaagtcaaaatattgttaaattcaatgcaaacatattacttttgattttgttaa 42552599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 171
Target Start/End: Original strand, 43189685 - 43189733
Alignment:
Q  123 gtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    ||||||| |||| ||||| ||||||||||||| |||| |||||||||||    
T  43189685 gtgaaaagtgatgaatttgactttttaaaagttaaaatattgttgaatt 43189733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 66; Significance: 6e-29; HSPs: 58)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 117 - 242
Target Start/End: Original strand, 10163668 - 10163793
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgag 216  Q
    |||| |||||||| |||  |||||||||||||||||||||||| |||| |||||| ||||||||||||||| ||||| ||| |||||| |||||  ||||    
T  10163668 aaaagggtgaaaagtgaagaatttaactttttaaaagtcaaaatattgctgaattcaatataaatatactatttttagtttacttaactattaccttgag 10163767  T
Q  217 gacaatggttagcaagacccaaattt 242  Q
    |||| ||||||||||||||| |||||    
T  10163768 gacattggttagcaagaccctaattt 10163793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 110 - 240
Target Start/End: Complemental strand, 39567977 - 39567847
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||   |||  ||| || |||||||| | || ||||| ||||     
T  39567977 gcattggaaaatgatgaaaaatgataaatttaactttttaaaaatcaaaacattgttgaaaccaatgcaaacatgctacttttgacttccttaatcattg 39567878  T
Q  210 ctctgaggacaatggttagcaagacccaaat 240  Q
    | |||||| ||||||||||||||||| ||||    
T  39567877 ccctgagggcaatggttagcaagacctaaat 39567847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 108 - 208
Target Start/End: Original strand, 38610325 - 38610425
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccat 207  Q
    |||||||| |||||| | |||| |||  |||||||||||||||||||||||||||||||||||||||| |||||| |||| ||||||||| |||||||||    
T  38610325 ttgcattgaaaaatgataaaaagtgaagaatttaactttttaaaagtcaaaacattgttgaatttaatctaaataaactatttttaatttccttaaccat 38610424  T
Q  208 t 208  Q
    |    
T  38610425 t 38610425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 112 - 236
Target Start/End: Original strand, 25017328 - 25017452
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||   |||| ||| || |||||||| | || |||||||||| ||    
T  25017328 attggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttgaaaccaatacaaacatgctacttttgacttccttaaccattgct 25017427  T
Q  212 ctgaggacaatggttagcaagaccc 236  Q
     ||||  ||||||||||||||||||    
T  25017428 ttgagagcaatggttagcaagaccc 25017452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 52 - 116
Target Start/End: Original strand, 39567852 - 39567916
Alignment:
Q  52 ggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  39567852 ggtcttgctaaccattgccctcagggcaatgattaaggaagtcaaaagtagcatgtttgcattgg 39567916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 16315695 - 16315628
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||    
T  16315695 aagggtcttgctaaccattgccctcagggcaatggttaaggaagccaaaagtagcgtgtttgcattgg 16315628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 51 - 116
Target Start/End: Complemental strand, 35653416 - 35653351
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||    
T  35653416 gggtcttgctaaccattgccctcagggcaatggttaaggaagccaaaagtaccatgtttgcattgg 35653351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 39167667 - 39167572
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||||||||||||||||| | | |||||||||||||||||| ||||||||||||| |||| ||| |||||||| |||||||  ||||||||||||||    
T  39167667 attggaaaatggtgaaaagtaa-aaatttaactttttaaaaatcaaaacattgttaaattcaatgtaaatatattacttttggttttcttaaccatt 39167572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 238
Target Start/End: Complemental strand, 5151562 - 5151435
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||  ||||  ||| || ||||||||   || ||||||| ||      
T  5151562 cattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaactaatgcaaacatgctacttttgccttccttaaccgttgt 5151463  T
Q  211 tctgaggacaatggttagcaagacccaa 238  Q
     |||||  |||||||||| |||||||||    
T  5151462 cctgagagcaatggttagtaagacccaa 5151435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 12914249 - 12914122
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||| ||||||||||||| |||||||||||| ||||||||| |||||| |||||||||   |||  ||| |||||||||||   || |||||||||||    
T  12914249 gcattgaaaaatggtgaaaagtgataaatttaattttttaaaaatcaaaatattgttgaaaccaatgcaaacatactacttttggcttccttaaccatta 12914150  T
Q  210 ctctgaggacaatggttagcaagaccca 237  Q
    | || ||| ||||| ||| |||||||||    
T  12914149 ccctcagggcaatgattatcaagaccca 12914122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 35653290 - 35653417
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||||| |||||||||||||||||| ||| ||||||  ||||||||   |||  ||| ||  |||||||   || ||||||||||     
T  35653290 gcattggaaaatggtgaaaagtgataaatttaactttttgaaaatcaaaatgttgttgaaaccaatgcaaacatggtacttttggcttccttaaccattg 35653389  T
Q  210 ctctgaggacaatggttagcaagaccca 237  Q
    | |||||| |||||||||||||||||||    
T  35653390 ccctgagggcaatggttagcaagaccca 35653417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 12914123 - 12914188
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| ||| |||||||||||||| |||| ||||||||||||||||||| |||||||||||||    
T  12914123 gggtcttgataatcattgccctgagggtaatggttaaggaagccaaaagtagtatgtttgcattgg 12914188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 49 - 114
Target Start/End: Original strand, 34546724 - 34546789
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcatt 114  Q
    ||||||||||||||| |||||||| ||||||||| |||||||||||||||||| ||| ||||||||    
T  34546724 aagggtcttgctaactattgccctaagggcaatggttaaggaagccaaaagtatcatttttgcatt 34546789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 111 - 243
Target Start/End: Original strand, 3639111 - 3639242
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    ||||||||||||||||| | |||||||||||| |||||||||||| ||| |||||||||   |||  ||| ||| ||||||| | || |||||||||||     
T  3639111 cattggaaaatggtgaagagtgataaatttaattttttaaaagtc-aaatattgttgaaaccaatgcaaacatattacttttgacttccttaaccattat 3639209  T
Q  211 tctgaggacaatggttagcaagacccaaatttt 243  Q
     |||| | ||||||||| |||||||| ||||||    
T  3639210 cctgaaggcaatggttaacaagaccctaatttt 3639242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 12068211 - 12068258
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||    
T  12068211 attggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaa 12068258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 45 - 115
Target Start/End: Original strand, 27823203 - 27823274
Alignment:
Q  45 acttaagggtcttgctaaccattgccctg-agggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||||||||||||||| |||||||||||  ||||||||||||||||||| ||||| ||||||||||| ||||    
T  27823203 acttaagggtcttgctgaccattgccctccagggcaatgattaaggaagtcaaaattagcatgtttgtattg 27823274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 112 - 175
Target Start/End: Original strand, 39069313 - 39069376
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaat 175  Q
    |||||||||| ||||||| |||| |||||||| ||||||||||||||| |||||||||||||||    
T  39069313 attggaaaattgtgaaaagtgatgaatttaacattttaaaagtcaaaatattgttgaatttaat 39069376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 43414099 - 43414158
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||  ||||||||    
T  43414099 gcattggaaaatggtgaaaaatgatcaatttaactttttaaaaatcaaaatgttgttgaa 43414158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 8410089 - 8410155
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||| ||| ||||||||| | ||||||||||||||||||||||| ||||||||||| |||||    
T  8410089 agggtcttgttaatcattgccctcaaggcaatgattaaggaagccaaaactagcatgtttgtattgg 8410155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 197
Target Start/End: Original strand, 4293892 - 4293953
Alignment:
Q  136 aatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattt 197  Q
    |||||||||||||||||||||||| ||| ||||||  ||||||||||||||||||| |||||    
T  4293892 aatttaactttttaaaagtcaaaagattattgaatccaatataaatatactactttcaattt 4293953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 4962552 - 4962633
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||||||||||| |||||| |||||||||||||||||| ||||||||||  ||||||||  ||||| ||| || ||||||||    
T  4962552 cattggaaaatgatgaaaagtgataaatttaacttttttaaagtcaaaatgttgttgaaactaatacaaacatgctactttt 4962633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 25017456 - 25017387
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||||||||| || |  |||||| ||||||||| ||||||||||||||||| |||||    
T  25017456 ttaagggtcttgctaaccattgctctcaaagcaatggttaaggaagtcaaaagtagcatgtttgtattgg 25017387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 192
Target Start/End: Original strand, 28143159 - 28143240
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||||| |||||||||||||| |||||||||||||||||||| ||||||  ||||||||  ||||| ||| || ||||||||    
T  28143159 cattgggaaatggtgaaaaataataaatttaactttttaaaaatcaaaatgttgttgaaactaatacaaacatgctactttt 28143240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 108 - 204
Target Start/End: Original strand, 20184581 - 20184677
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    ||||||||  ||| |||||||| |||| ||||| ||||||||||||| ||||||||||||||| ||||| ||  ||| ||||||| |||| ||||||    
T  20184581 ttgcattgagaaacggtgaaaagtgatgaatttcactttttaaaagttaaaacattgttgaatctaatacaatcatattacttttgatttccttaac 20184677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 4421999 - 4422058
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||| ||||||||||||||||||| || ||||||  ||||||||    
T  4421999 gcattggaaaatggtgaaaagtgataaatttaactttttacaaatcaaaatgttgttgaa 4422058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 8410210 - 8410167
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  8410210 gaaaatggtaaaaaatgataaatttaactttttaaaagtcaaaa 8410167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 16315569 - 16315693
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||||| |||||||  ||||||||||| ||||||||  ||||||||   |||  ||| |  ||||||||   || ||||||||||     
T  16315569 gcattggaaaatggtgaaaagtgataaa--taactttttaatagtcaaaatgttgttgaaaccaatgcaaacacgctacttttggcttccttaaccattg 16315666  T
Q  210 ctctgaggacaatggttagcaagaccc 236  Q
    | |||||| ||||||||||||||||||    
T  16315667 ccctgagggcaatggttagcaagaccc 16315693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 57 - 115
Target Start/End: Complemental strand, 4422119 - 4422061
Alignment:
Q  57 tgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||| |||||||| |||||||||||| ||||||||| |||||||| |||||||||||||    
T  4422119 tgctgaccattgcactgagggcaatggttaaggaagtcaaaagtaacatgtttgcattg 4422061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 110 - 208
Target Start/End: Complemental strand, 39693084 - 39692986
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||||| ||| |||| |||||||||||||||| |||||||||||| |||| ||||||||| | |||| ||| ||  ||||||| | || ||||||||||    
T  39693084 gcattgaaaagtggtaaaaaatgataaatttatctttttaaaagttaaaatattgttgaaatcaatacaaacatgttacttttgacttccttaaccatt 39692986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 34546851 - 34546726
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    ||||| ||||||||||||| |||||||||||| ||||||||||| ||||  ||||||||  ||||  ||| ||  |||||||   || |||||||||| |    
T  34546851 cattgaaaaatggtgaaaagtgataaatttaattttttaaaagttaaaatgttgttgaaactaatgcaaaaatgatacttttggcttccttaaccattgc 34546752  T
Q  211 tctgaggacaatggttagcaagaccc 236  Q
     || ||| |||| |||||||||||||    
T  34546751 ccttagggcaatagttagcaagaccc 34546726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 37243919 - 37243862
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||| |||||||||||||||||||||| | ||||  ||||||||    
T  37243919 attggaaaatggtgaaaagtgataaatttaactttttaaaaattaaaatgttgttgaa 37243862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 27823331 - 27823291
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaa 152  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  27823331 attggaaaatggtgaaaagtgataaatttaactttttaaaa 27823291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 1759889 - 1759842
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||| ||||||| ||||| |||||||||||||||||||||||||||||    
T  1759889 attgaaaaatggagaaaagtgataaatttaactttttaaaagtcaaaa 1759842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 114
Target Start/End: Original strand, 5151437 - 5151500
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcatt 114  Q
    ||||||| ||||||||||| || ||| ||| | ||||||||| |||||||||||||||||||||    
T  5151437 gggtcttactaaccattgctctcaggacaacggttaaggaaggcaaaagtagcatgtttgcatt 5151500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 13951271 - 13951330
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| ||||||||||||| |||||||||||  ||||||||||||||||  ||||||||    
T  13951271 gcattgaaaaatggtgaaaagtgataaatttatttttttaaaagtcaaaatgttgttgaa 13951330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 28599691 - 28599738
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||| |||||||||||||||||| ||||||||||||| ||||    
T  28599691 attggaaaatagtgaaaaatgataaatttgactttttaaaagttaaaa 28599738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 678522 - 678464
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    |||||||||||||||||| | || |||||||| |||||||||| |||| ||||||||||    
T  678522 attggaaaatggtgaaaagtaatgaatttaaccttttaaaagttaaaaaattgttgaat 678464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 170
Target Start/End: Original strand, 3015091 - 3015145
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    |||||| ||| |||||||| ||||||||||||||||||| |||| ||||||||||    
T  3015091 gaaaatagtgtaaaatgattaatttaactttttaaaagttaaaatattgttgaat 3015145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Complemental strand, 24288553 - 24288495
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaata 176  Q
    |||||||||||| ||||| |||||||||||||||||| | || ||||||||||| ||||    
T  24288553 aaatggtgaaaagtgatagatttaactttttaaaagttacaaaattgttgaattcaata 24288495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 24373668 - 24373726
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaata 176  Q
    |||||||||||| ||||| |||||||||||||||||| | || ||||||||||| ||||    
T  24373668 aaatggtgaaaagtgatagatttaactttttaaaagttacaaaattgttgaattcaata 24373726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 35945319 - 35945261
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||| ||||||| ||||||||||||||||||||| || ||||  ||||||||    
T  35945319 cattggaaaatagtgaaaagtgataaatttaactttttaaatgttaaaatgttgttgaa 35945261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 338801 - 338858
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||| |||||| | |||| |||||||||||||||||||||| |||||| |||||||||    
T  338801 attgaaaaatgataaaaagtgataaatttaactttttaaaaatcaaaatattgttgaa 338858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 1479171 - 1479220
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||| |||||  |||||| |||||||||||||||||||||||||||||    
T  1479171 gcattgaaaaataatgaaaagtgataaatttaactttttaaaagtcaaaa 1479220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 13951373 - 13951332
Alignment:
Q  75 gggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| ||||||||||||||||||||||| |||||||||    
T  13951373 gggcaatggttaaggaagccaaaagtagcatgcttgcattgg 13951332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 192
Target Start/End: Complemental strand, 2970190 - 2970122
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||||||||||| |||||| ||||||||||| |||| ||||||||||| |||  |||  ||||||||||    
T  2970190 tgaaaaatgatagatttaattttttaaaagttaaaaaattgttgaattaaatgcaaacttactactttt 2970122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 50 - 85
Target Start/End: Complemental strand, 105019 - 104984
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgatt 85  Q
    ||||||||||||||||||||||| ||||||||||||    
T  105019 agggtcttgctaaccattgccctaagggcaatgatt 104984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Original strand, 3241986 - 3242049
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    ||||||||| || | ||||||| |||| |||| |||||||||||||| |||| |||||||||||    
T  3241986 ttgcattgggaagtagtgaaaattgatgaattaaactttttaaaagttaaaatattgttgaatt 3242049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 145
Target Start/End: Complemental strand, 15915906 - 15915871
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactt 145  Q
    |||||||||||||||||||| |||||||||||||||    
T  15915906 gcattggaaaatggtgaaaagtgataaatttaactt 15915871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 171
Target Start/End: Complemental strand, 17168752 - 17168689
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||||||| |||| ||||||||||||| ||||| ||||||||||| | |||| |||| ||||||    
T  17168752 ttgcattgaaaaacggtgaaaaatgatgaatttgactttttaaaatttaaaatattgctgaatt 17168689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 50 - 116
Target Start/End: Complemental strand, 3639236 - 3639170
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||| ||||||||||| | |||  |||| ||||||||| ||||||||  |||||||||||||    
T  3639236 agggtcttgttaaccattgccttcaggataatggttaaggaagtcaaaagtaatatgtttgcattgg 3639170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 166
Target Start/End: Original strand, 12349585 - 12349635
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgtt 166  Q
    |||||||||||||| ||||| |||| ||||||||||||| |||| ||||||    
T  12349585 gaaaatggtgaaaagtgatagatttgactttttaaaagttaaaaaattgtt 12349635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 19894894 - 19894836
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgtt 166  Q
    |||||||  |||||||| ||| ||||| ||||||||||||||||||| |||| ||||||    
T  19894894 ttgcattaaaaaatggttaaatatgatgaatttaactttttaaaagttaaaatattgtt 19894836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 124 - 181
Target Start/End: Complemental strand, 17606021 - 17605964
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaat 181  Q
    |||||||| || ||||||||||||||||||| |||| ||| ||||||| |||| ||||    
T  17606021 tgaaaaataatgaatttaactttttaaaagttaaaatattattgaattcaatacaaat 17605964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 25568327 - 25568376
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||| |||||| |||||| ||||| |||||||||||||||| ||||||    
T  25568327 gcattgaaaaatgatgaaaagtgatacatttaactttttaaaaatcaaaa 25568376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 39076675 - 39076622
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    ||||||| ||||||||||  ||||| ||||||||||| |||| |||||||||||    
T  39076675 aaatggtaaaaaatgataggtttaattttttaaaagttaaaaaattgttgaatt 39076622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 39335540 - 39335487
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    ||||| || |||| |||| ||||||||||||||||||||||||  |||||||||    
T  39335540 aaaatagtaaaaagtgatgaatttaactttttaaaagtcaaaatgttgttgaat 39335487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 169
Target Start/End: Complemental strand, 5058812 - 5058760
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||| ||||||| |||||||||||||||||||||| | || | |||||||||    
T  5058812 aaaattgtgaaaagtgataaatttaactttttaaaaattaacaaattgttgaa 5058760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 168
Target Start/End: Complemental strand, 28996285 - 28996229
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttga 168  Q
    |||||||||||||||||| |  | |||| |||||||||||||| |||| ||||||||    
T  28996285 attggaaaatggtgaaaagttgtgaattcaactttttaaaagttaaaaaattgttga 28996229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 64; Significance: 9e-28; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 118 - 237
Target Start/End: Original strand, 11295507 - 11295626
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgagg 217  Q
    ||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||  ||| ||||||||||    |||||    
T  11295507 aaatgatgaaaaatgatgaatttaactttttaaaagtcaaaacaatgttgaattcaatataaatatactaattttggtttccttaaccattgtcatgagg 11295606  T
Q  218 acaatggttagcaagaccca 237  Q
     || ||||||||||||||||    
T  11295607 gcactggttagcaagaccca 11295626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 118 - 190
Target Start/End: Original strand, 11332837 - 11332909
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactt 190  Q
    |||||||| ||| |||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11332837 aaatggtgtaaagtgaagaatttaactttttaaaagtcaaaacattgttgaattcaatataaatatactactt 11332909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 108 - 228
Target Start/End: Complemental strand, 38870080 - 38869960
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccat 207  Q
    ||||||||||||||| |||||| |||  |||| ||| ||||||||||||||| |||| |||||| ||| ||||||||||||||||  ||| ||| |||||    
T  38870080 ttgcattggaaaatgatgaaaagtgaagaattcaacattttaaaagtcaaaatattgatgaattcaatgtaaatatactacttttggtttccttgaccat 38869981  T
Q  208 tactctgaggacaatggttag 228  Q
    | |||||||| || |||||||    
T  38869980 tgctctgagggcactggttag 38869960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 25249376 - 25249435
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||    
T  25249376 gcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 25249435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 4990007 - 4989883
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||||||   |||||||   |||  ||| || |||||||| | || ||||||||||     
T  4990007 gcattggaaaatagtgaaaaatgataaatttaactttttaaatgtcaaaa---tgttgaaaccaatgcaaacatgctacttttgacttccttaaccattg 4989911  T
Q  210 ctctgaggacaatggttagcaagaccca 237  Q
    |  ||||| |||||||||||||||||||    
T  4989910 ccatgagggcaatggttagcaagaccca 4989883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 4989884 - 4989949
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||| | ||||||| ||||||||| |||||||||||||||||||||||    
T  4989884 gggtcttgctaaccattgccctcatggcaatggttaaggaagtcaaaagtagcatgtttgcattgg 4989949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 26672864 - 26672738
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    ||||||||||||| | ||||| ||||||||||| ||||||||||||||||  ||||||||   |||||||| ||  || |||| |||| ||||||||||     
T  26672864 gcattggaaaatgataaaaaaggataaatttaattttttaaaagtcaaaatgttgttgaaaccaatataaacatcgtatttttgatttccttaaccattg 26672765  T
Q  210 ctctgaggacaatggttagcaagaccc 236  Q
    | || ||| ||||| ||||||||||||    
T  26672764 ccctcagggcaatgattagcaagaccc 26672738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 110 - 239
Target Start/End: Complemental strand, 6433618 - 6433489
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||| |||||||| |||| | |||||||||||||||||||||| |||| |||||| ||   |||  ||| |||||||||||   || ||||||||||     
T  6433618 gcattgaaaaatggtaaaaagttataaatttaactttttaaaagttaaaatattgttaaaaccaatgcaaagatactacttttgtcttccttaaccattg 6433519  T
Q  210 ctctgaggacaatggttagcaagacccaaa 239  Q
    |||||||| ||||| ||||| |||||||||    
T  6433518 ctctgagggcaatgattagcgagacccaaa 6433489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 3174402 - 3174469
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||||| | |||||   ||||||||||||||||||||||||||| |||||    
T  3174402 aagggtcttgctaaccattgccctcatggcaacagttaaggaagccaaaagtagcatgtttgtattgg 3174469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 18069036 - 18068977
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||| ||||||||||||||||||||| |||||||  ||||||||    
T  18069036 gcattggaaaatggtgaaaagtgataaatttaactttttaaaggtcaaaatgttgttgaa 18068977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 117 - 204
Target Start/End: Original strand, 31596463 - 31596549
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||||||||||||||||| ||||| |||||||||||||||||| |||||| ||| || |||| | |||||||||||  ||||||||||    
T  31596463 aaaatggtgaaaaatgatgaattttactttttaaaagtcaaaatattgttaaatctattatata-atactacttttggttttcttaac 31596549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 112 - 206
Target Start/End: Original strand, 19389347 - 19389441
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaacca 206  Q
    |||||||||| ||||||| ||||||||||||||||||||||||||||| || ||||||   |||  ||| || |||||||| |||| ||||||||    
T  19389347 attggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatatcgttgaaaacaatgcaaacatgctacttttgatttccttaacca 19389441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 118 - 176
Target Start/End: Original strand, 34421361 - 34421419
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaata 176  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||||||||||| ||||    
T  34421361 aaatggtgaaaaatgaaaaattcaactttttaaaaatcaaaacattgttgaattcaata 34421419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 26892858 - 26892778
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||| ||||| || ||||||||||||||||||||||||||||| |||| ||| |||||  ||||||||| |||||| ||||    
T  26892858 attgaaaaattgtaaaaaatgataaatttaactttttaaaagttaaaatattattgaaactaatataaacatactaatttt 26892778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 45338077 - 45338029
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  45338077 cattgaaaaatggtgaaaaatgataaatttaactttttaaaaatcaaaa 45338029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 3174532 - 3174485
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||||||||||||| |||||||| ||||||||||||||||||    
T  3174532 attggaaaatggtgaaaaattataaatttgactttttaaaagtcaaaa 3174485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Complemental strand, 8018833 - 8018786
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||||||||||| |||||||||||||||||||||| ||||||    
T  8018833 attggaaaatggtgaaaagtgataaatttaactttttaaaaatcaaaa 8018786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 10694874 - 10694775
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgag 216  Q
    |||||||| |||| |||||||||||||||||||||||||||||  |||||||| | |||  ||||||  |||||||   || |||||||||| |||||||    
T  10694874 aaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaatatgatacttttggcttccttaaccattgctctgag 10694775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 6939231 - 6939173
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||| |||||||||| || |||||||||||||||||||||||||||||  ||||||||    
T  6939231 cattgaaaaatggtgacaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 6939173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 26195409 - 26195467
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||| ||||||| |||||||||||||||||||||||| ||||  ||||||||    
T  26195409 cattggaaaattgtgaaaagtgataaatttaactttttaaaagttaaaatgttgttgaa 26195467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 21016306 - 21016249
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||| ||||||||||||| ||||| |||||||||||||||||||||||  ||||||||    
T  21016306 attgaaaaatggtgaaaagtgatagatttaactttttaaaagtcaaaatgttgttgaa 21016249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Original strand, 33741523 - 33741568
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||    
T  33741523 tgaaaaatgataaatttaactttttaaaagttaaaatattgttgaa 33741568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 48 - 91
Target Start/End: Original strand, 26672735 - 26672778
Alignment:
Q  48 taagggtcttgctaaccattgccctgagggcaatgattaaggaa 91  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  26672735 taagggtcttgctaatcattgccctgagggcaatggttaaggaa 26672778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 21016093 - 21016151
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||| |||||||| |||| ||||| |||||||||||||||||||||||  ||||||||    
T  21016093 cattgaaaaatggttaaaagtgatagatttaactttttaaaagtcaaaatgttgttgaa 21016151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 5129491 - 5129540
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||| |||||| |||||| |||||||||||| ||||||||||||||||    
T  5129491 gcattgaaaaatgatgaaaagtgataaatttaattttttaaaagtcaaaa 5129540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 123 - 204
Target Start/End: Complemental strand, 7473634 - 7473553
Alignment:
Q  123 gtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    ||||||||||||  |||| ||||||||||||| |||| |||||| ||||| ||  |||  |||||| |||||||||||||||    
T  7473634 gtgaaaaatgatgcatttgactttttaaaagttaaaatattgttaaatttcatgcaaacttactacctttaattttcttaac 7473553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 35973925 - 35973973
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaattt 172  Q
    ||||||||||||||||||| ||||||||||  |||| ||||||||||||    
T  35973925 tgaaaaatgataaatttaattttttaaaagataaaatattgttgaattt 35973973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 39972189 - 39972269
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    ||||| |||||||||||| |||| ||||| ||||||||||||| |||| |||||| |||| |||  ||| |||||| ||||    
T  39972189 attgggaaatggtgaaaagtgatgaatttgactttttaaaagttaaaaaattgttcaattcaatgcaaacatactattttt 39972269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 167
Target Start/End: Complemental strand, 8210218 - 8210167
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttg 167  Q
    |||| |||||||||||||| |||| |||||||||||||| |||| |||||||    
T  8210218 gaaagtggtgaaaaatgatgaattcaactttttaaaagttaaaaaattgttg 8210167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 27982456 - 27982417
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaagga 90  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  27982456 gggtcttgctaaccagtgccctaagggcaatgattaagga 27982417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 28039758 - 28039719
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaagga 90  Q
    ||||||||||||||| |||||| |||||||||||||||||    
T  28039758 gggtcttgctaaccagtgccctaagggcaatgattaagga 28039719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 44874281 - 44874346
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||  |||||||||||||| |||   ||||| ||||||||| |||||||||||||||||||||||    
T  44874281 ttaagggttctgctaaccattgcc-tga---caatggttaaggaagacaaaagtagcatgtttgcattgg 44874346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 154
Target Start/End: Complemental strand, 44874398 - 44874355
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagt 154  Q
    ||||| ||||||||||||| |||||||||||| |||||||||||    
T  44874398 cattgaaaaatggtgaaaagtgataaatttaaatttttaaaagt 44874355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 115
Target Start/End: Original strand, 24066897 - 24066963
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||||| | |||||| || |||||| |||||||| | ||||||||||  |||||||||    
T  24066897 aagggtcttgctaactactgccctcagagcaatggttaaggaaactaaaagtagcagttttgcattg 24066963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 4308876 - 4308823
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    |||||||| ||||||||| ||||||||||| ||||||| |||| | ||||||||    
T  4308876 aaaatggtaaaaaatgatgaatttaactttataaaagttaaaatagtgttgaat 4308823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 27619285 - 27619216
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattggaa 118  Q
    ||||||| ||||| | | |||||| |||||| | |||||||| ||||||||||| | |||||||||||||    
T  27619285 aagggtcatgctagcaagtgcccttagggcacttattaaggatgccaaaagtagtaggtttgcattggaa 27619216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 34713958 - 34714015
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||| ||||||||| ||| |||||||||| |||| |||||||||||||  ||||||||    
T  34713958 attgaaaaatggtgcaaagtgataaatttcacttcttaaaagtcaaaatgttgttgaa 34714015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 111 - 208
Target Start/End: Complemental strand, 37433338 - 37433242
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    ||||| |||||| |||||| |||||||||||||||||| ||||| ||||  ||||||||   |||  ||| ||||||||||||| || ||||| ||||    
T  37433338 cattgaaaaatgatgaaaagtgataaatttaacttttt-aaagttaaaatgttgttgaaaccaatgcaaacatactacttttaacttccttaatcatt 37433242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 197
Target Start/End: Original strand, 6396315 - 6396395
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattt 197  Q
    ||||||||||| | | || |||||||| ||||||| || ||||  ||||||||| ||||| |||||||||| |||| ||||    
T  6396315 aaaatggtgaagagtaatgaatttaacattttaaacgttaaaatgttgttgaatctaatacaaatatactaattttgattt 6396395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 54 - 98
Target Start/End: Original strand, 18068241 - 18068285
Alignment:
Q  54 tcttgctaaccattgccctgagggcaatgattaaggaagccaaaa 98  Q
    ||||||||||||||||||| ||| ||||| |||||||| ||||||    
T  18068241 tcttgctaaccattgccctcaggacaatggttaaggaaaccaaaa 18068285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 88
Target Start/End: Complemental strand, 18131339 - 18131299
Alignment:
Q  48 taagggtcttgctaaccattgccctgagggcaatgattaag 88  Q
    |||||||||||||||| | |||||| |||||||||||||||    
T  18131339 taagggtcttgctaactaatgccctcagggcaatgattaag 18131299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 21016185 - 21016153
Alignment:
Q  84 ttaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||| |||||||||||||||||||||||    
T  21016185 ttaaggaagtcaaaagtagcatgtttgcattgg 21016153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 192
Target Start/End: Complemental strand, 24305013 - 24304934
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||| |||| |||||||| |||  |||||||||||| || | ||||||  |||||||||| ||| ||||||||||||||||    
T  24305013 attgaaaaacggtgaaaagtgaagaatttaacttttaaaga-tcaaaattttgttgaattcaatgtaaatatactactttt 24304934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 152
Target Start/End: Complemental strand, 35930208 - 35930168
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaa 152  Q
    |||| |||||| |||||||| ||||||||||||||||||||    
T  35930208 attgaaaaatgatgaaaaataataaatttaactttttaaaa 35930168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 76 - 116
Target Start/End: Original strand, 37433239 - 37433279
Alignment:
Q  76 ggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||  |||||||| |||||||||||||    
T  37433239 ggcaatgattaaggaagttaaaagtagtatgtttgcattgg 37433279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 62; Significance: 1e-26; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 111 - 236
Target Start/End: Complemental strand, 2966613 - 2966488
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||  ||||||||   |||  |||||| |||||||||  || |||||||||| |    
T  2966613 cattggaaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaaccaatgcaaatatgctacttttagcttccttaaccattgc 2966514  T
Q  211 tctgaggacaatggttagcaagaccc 236  Q
     |||||||||||| ||||||||||||    
T  2966513 cctgaggacaatgattagcaagaccc 2966488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 6999274 - 6999150
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||   |||  ||| || ||||||||   || |||||||||| |     
T  6999274 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttggcttccttaaccattgcc 6999175  T
Q  212 ctgaggacaatggttagcaagaccc 236  Q
    |||||||||||||||||||| ||||    
T  6999174 ctgaggacaatggttagcaaaaccc 6999150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 111 - 235
Target Start/End: Original strand, 39085828 - 39085952
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    |||||||||||| | |||| |||||||||||||||||||||||||||||  |||||||| | |||  ||| || || ||||| | || |||||||||| |    
T  39085828 cattggaaaatgataaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaacatgctgcttttgacttccttaaccattgc 39085927  T
Q  211 tctgaggacaatggttagcaagacc 235  Q
    |||||||||||||||||||||||||    
T  39085928 tctgaggacaatggttagcaagacc 39085952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 118 - 233
Target Start/End: Complemental strand, 33849052 - 33848937
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgagg 217  Q
    |||||||||||||  |  ||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||  ||| |||||||||| | ||||||    
T  33849052 aaatggtgaaaaaccaagaatttaactttttaaaagtcaaaccattgttgaatttaatataaatatattacttttggtttccttaaccattgccctgagg 33848953  T
Q  218 acaatggttagcaaga 233  Q
    ||| | ||||| ||||    
T  33848952 acactcgttagtaaga 33848937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 6999148 - 6999215
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||| ||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  6999148 aagggttttgctaaccattgtcctcagggcaatggttaaggaagccaaaagtagcatgtttgcattgg 6999215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 2239658 - 2239574
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    ||||| || |||||||| ||||||||| ||||||||||||||||||| |||| ||||||||||  |||| |||||||||||||||    
T  2239658 ttgcaatgaaaaatggtaaaaaatgatgaatttaactttttaaaagttaaaatattgttgaatccaatacaaatatactactttt 2239574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 11659334 - 11659210
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||| ||||| ||||||| |||  ||||||||||||||||| | |||| ||||||||||| ||| |||||||||| |||||  ||| |||||||||| |     
T  11659334 attgaaaaatagtgaaaagtgaagaatttaactttttaaaaattaaaatattgttgaattcaatgtaaatatactgcttttggtttccttaaccattgcc 11659235  T
Q  212 ctgaggacaatggttagcaagaccc 236  Q
    || || | | |||||||||||||||    
T  11659234 ctaagaatactggttagcaagaccc 11659210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 16242011 - 16242083
Alignment:
Q  136 aatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||||||||||||||||||||||||||| |||||||  | |||||||||||||||||| |||  |||||||||    
T  16242011 aatttaactttttaaaagtcaaaacattattgaattccacataaatatactacttttagtttctttaaccatt 16242083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 208
Target Start/End: Complemental strand, 33726452 - 33726356
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||| ||||||||||||||| |||||||||||||| ||||||| |||| ||||||||| | |||| ||| || ||| |||| |||| ||||||||||    
T  33726452 attgaaaaatggtgaaaaataataaatttaactttctaaaagttaaaatattgttgaaatcaatacaaacatgctatttttgatttccttaaccatt 33726356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 34392589 - 34392709
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    ||||||||||||| ||||||||  ||||||| ||||||||||||||||    |||||||| ||| ||||||||||||||||  ||| ||||| |||| |     
T  34392589 attggaaaatggttaaaaatgaagaatttaattttttaaaagtcaaaa----gttgaattcaatgtaaatatactacttttggtttccttaa-cattgcc 34392683  T
Q  212 ctgaggacaatggttagcaagaccca 237  Q
    |||||| ||  |||||||||||||||    
T  34392684 ctgagggcaccggttagcaagaccca 34392709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 862559 - 862602
Alignment:
Q  73 gagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  862559 gagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 862602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 2966486 - 2966553
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||| ||||| ||| ||||||||| |||||||||| ||||||||||| ||||||||||    
T  2966486 aagggtcttgctaatcattgtcctcagggcaatggttaaggaagctaaaagtagcatatttgcattgg 2966553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 33864429 - 33864370
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||| | ||||||||||| ||||||||||||||| |||||||||    
T  33864429 gcattggaaaatggtgaaaagtaataaatttaacattttaaaagtcaaaatattgttgaa 33864370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 765186 - 765244
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||| ||||||| |||||||||||||||||||||||||||||  ||||||||    
T  765186 cattggaaaattgtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 765244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 862661 - 862604
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||||  ||||||||    
T  862661 attggaaaatggtgaaaagtgataaatttaactttttaagagtcaaaatcttgttgaa 862604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 224
Target Start/End: Complemental strand, 27495196 - 27495083
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    |||| |||||||||||||| ||||||||||||| |||||||| ||||||  ||||||||   |||  ||| ||||||||||| | || |||||||||| |    
T  27495196 cattagaaaatggtgaaaagtgataaatttaacattttaaaaatcaaaatgttgttgaaaccaatgcaaacatactacttttgacttccttaaccattgc 27495097  T
Q  211 tctgaggacaatgg 224  Q
     || ||||||||||    
T  27495096 cctcaggacaatgg 27495083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 207
Target Start/End: Original strand, 35445326 - 35445423
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaacttttt-aaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccat 207  Q
    ||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||||||||   |||| ||| || |||||||| | || |||||||||    
T  35445326 cattgaaaaatggtgaaaagtgataaatttaactttttcaaaagtcaaaatattgttgaaaccaatacaaacatgctacttttgacttgcttaaccat 35445423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 9201537 - 9201589
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  9201537 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 9201589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 136 - 192
Target Start/End: Original strand, 12695299 - 12695355
Alignment:
Q  136 aatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    ||||||||||||||||| |||||||||||||||||| ||| ||||||||||| ||||    
T  12695299 aatttaactttttaaaaatcaaaacattgttgaattcaatgtaaatatactattttt 12695355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 17095108 - 17095160
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  17095108 aaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 17095160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 34512714 - 34512626
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||||||||||||| ||||| |||| ||||||||||||| |||| |||||| |||| |||| |||  ||||| ||||| ||||||||||    
T  34512714 gaaaatggtgaaaagtgatagatttgactttttaaaagttaaaaaattgttaaattcaatacaaacttactatttttagttttcttaac 34512626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 44299723 - 44299775
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| |||||||||    
T  44299723 aaaatggtgaaaagtgataaatttaacattttaaaagtcaaaatattgttgaa 44299775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 747528 - 747587
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||||||||| ||||||| ||||| |||||||||||||||||| |||| |||||||||||    
T  747528 attggaaaatagtgaaaagtgatagatttaactttttaaaagttaaaaaattgttgaatt 747587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 13997939 - 13997998
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| ||||| |||||||||||||||||||||||||||||| | |||| |||||||||    
T  13997939 gcattgaaaaattgtgaaaaatgataaatttaactttttaaaaattaaaatattgttgaa 13997998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 23685689 - 23685736
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||    
T  23685689 attggaaaatggggaaaagtgataaatttaactttttaaaagtcaaaa 23685736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 52 - 115
Target Start/End: Complemental strand, 39085952 - 39085889
Alignment:
Q  52 ggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||||||| ||| || |||||| ||||||||| |||||| |||||||||||||||    
T  39085952 ggtcttgctaaccattgtcctcagagcaatggttaaggaagtcaaaagcagcatgtttgcattg 39085889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 137 - 192
Target Start/End: Original strand, 40798385 - 40798440
Alignment:
Q  137 atttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    ||||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||    
T  40798385 atttaactttttaaaagtcaaaacattgttgaattcaatgtaagtataccactttt 40798440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 74 - 116
Target Start/End: Original strand, 16361537 - 16361579
Alignment:
Q  74 agggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  16361537 agggcaatgattaaggaagccaaaagtaacatgtttgcattgg 16361579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 126 - 204
Target Start/End: Complemental strand, 30831676 - 30831598
Alignment:
Q  126 aaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    ||||||||| ||||||||||||||||||| |||| |||||| ||| | ||| ||||  ||||||||||| |||||||||    
T  30831676 aaaaatgatgaatttaactttttaaaagtaaaaatattgttaaatcttatacaaattaactacttttaaatttcttaac 30831598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 159
Target Start/End: Complemental strand, 17603885 - 17603836
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||| |||||| | ||||||||||||||||||||||||||||||||||    
T  17603885 gcattgaaaaatgataaaaaatgataaatttaactttttaaaagtcaaaa 17603836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 63 - 116
Target Start/End: Original strand, 27495083 - 27495136
Alignment:
Q  63 ccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||| ||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  27495083 ccattgtcctgagggcaatggttaaggaagtcaaaagtagtatgtttgcattgg 27495136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 234
Target Start/End: Complemental strand, 1321241 - 1321117
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaa-ccatta 209  Q
    |||||||||||||| |||||| |||||||||||| ||||||| ||||||  |||||||| | ||| |||| || |||  |||   || ||||| |||||     
T  1321241 cattggaaaatggtaaaaaataataaatttaactctttaaaaatcaaaatgttgttgaaatcaatgtaaacatgctaactttggcttccttaacccattg 1321142  T
Q  210 ctctgaggacaatggttagcaagac 234  Q
    | |||||| ||||||||||||||||    
T  1321141 ccctgagggcaatggttagcaagac 1321117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 14120863 - 14120951
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||||||||||||| ||||| ||||| |||||||| ||| |||| |||||| |||| ||||||||| ||| | ||||| ||| ||||||    
T  14120863 gaaaatggtgaaaagtgatagatttagctttttaatagttaaaaaattgttaaattcaatataaatttaccatttttagtttccttaac 14120951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 16361639 - 16361591
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||||||| |||| |||||||||||||||| ||||||||||||    
T  16361639 cattggaaaatggtaaaaattgataaatttaactttataaaagtcaaaa 16361591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 17056099 - 17056151
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||| ||||||||||||||||||||||| |||||  ||||||||    
T  17056099 aaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaa 17056151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 17068546 - 17068598
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||| ||||||||||||||||||||||| |||||  ||||||||    
T  17068546 aaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaa 17068598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 117 - 169
Target Start/End: Original strand, 17074529 - 17074581
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||| ||||||||||||||||||||||| |||||  ||||||||    
T  17074529 aaaatggtgaaaagtgataaatttaactttttaaaagacaaaatgttgttgaa 17074581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 17118412 - 17118456
Alignment:
Q  114 tggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaa 158  Q
    ||||||||| ||||||||||||||||||||||||||||| |||||    
T  17118412 tggaaaatgttgaaaaatgataaatttaactttttaaaactcaaa 17118456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 53 - 115
Target Start/End: Original strand, 1321117 - 1321180
Alignment:
Q  53 gtcttgctaaccattgccctgagggcaat-gattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||||||||||||||||||| |||||||| | ||||||||||||||  |||||||||| |||||    
T  1321117 gtcttgctaaccattgccctcagggcaatgggttaaggaagccaaagttagcatgtttacattg 1321180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 39401571 - 39401628
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||| ||||||||||||| |||||| ||||||||||||||||||||||  ||||||||    
T  39401571 cattgaaaaatggtgaaaagtgataa-tttaactttttaaaagtcaaaattttgttgaa 39401628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 39401693 - 39401630
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||       |||||||| ||||||||||||||||||||||||||| |||||    
T  39401693 ttaagggtcttgctaaccattc------gggcaatggttaaggaagccaaaagtagcatgtttgtattgg 39401630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 192
Target Start/End: Complemental strand, 2805441 - 2805373
Alignment:
Q  126 aaaaatgataaatttaacttttt--aaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||| |||| |||||||||||||  ||||||||||| |||||||||| ||||| ||| |||||||||||    
T  2805441 aaaagtgatgaatttaactttttttaaaagtcaaaatattgttgaatctaatacaaacatactactttt 2805373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 118 - 159
Target Start/End: Original strand, 9965098 - 9965139
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  9965098 aaatggtgaaaaattatgaatttaactttttaaaagtcaaaa 9965139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 111 - 148
Target Start/End: Original strand, 11445327 - 11445364
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaacttttt 148  Q
    ||||| ||||||||||||||||||||||||||||||||    
T  11445327 cattgaaaaatggtgaaaaatgataaatttaacttttt 11445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 115
Target Start/End: Complemental strand, 23685810 - 23685749
Alignment:
Q  54 tcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||| |||||||||  | || ||||||| |||||||||||||||||| |||||||||||||    
T  23685810 tcttgataaccattgttccgatggcaatgtttaaggaagccaaaagtaacatgtttgcattg 23685749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 29260167 - 29260224
Alignment:
Q  114 tggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||||||||||||||| ||||| |||| |||||| |||||| |||| |||||||||||    
T  29260167 tggaaaatggtgaaaagtgatagatttgacttttaaaaagttaaaaaattgttgaatt 29260224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 34220679 - 34220740
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||| || ||||||||| |||| ||||||| ||||||||||| |||| |||||||||    
T  34220679 ttgcattgggaagtggtgaaaagtgatgaatttaagtttttaaaagttaaaatattgttgaa 34220740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 41436550 - 41436493
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||| |||||| |||||| ||||||| |||||||||||||||||||||  ||||||||    
T  41436550 attgaaaaatgatgaaaagtgataaacttaactttttaaaagtcaaaatgttgttgaa 41436493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 120 - 192
Target Start/End: Original strand, 3454743 - 3454814
Alignment:
Q  120 atggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    ||||| |||| |||||| ||||||||||||||||| |||| ||||||||||| |||| |||  ||||||||||    
T  3454743 atggtaaaaagtgataactttaactttttaaaagt-aaaatattgttgaattcaatacaaaattactactttt 3454814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 9201653 - 9201590
Alignment:
Q  53 gtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||| |||||||| ||||||||  |||| |||| |||||||| |||||||| |||||    
T  9201653 gtcttgctaactattgccctcagggcaatagttaaagaagtcaaaagtaacatgtttgtattgg 9201590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 17056196 - 17056153
Alignment:
Q  73 gagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||    
T  17056196 gagggcaatggttaaggaagccaaaaatagcatatttgcattgg 17056153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 116
Target Start/End: Complemental strand, 17068643 - 17068600
Alignment:
Q  73 gagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||| ||||||||||||||| |||||| ||||||||||    
T  17068643 gagggcaatggttaaggaagccaaaaatagcatatttgcattgg 17068600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 73 - 116
Target Start/End: Original strand, 41436448 - 41436491
Alignment:
Q  73 gagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||| |||| |||| |||||||||||||||||||||||    
T  41436448 gagggcaatggttaatgaagtcaaaagtagcatgtttgcattgg 41436491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 44173193 - 44173134
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||| ||||||||||||||||||| ||||||||| | ||||  ||||||||    
T  44173193 gcattgaaaaatgatgaaaaatgataaatttaattttttaaaaattaaaatgttgttgaa 44173134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 47 - 89
Target Start/End: Original strand, 6084650 - 6084692
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaagg 89  Q
    |||||||||| ||||||||||||||| ||| ||||||||||||    
T  6084650 ttaagggtctcgctaaccattgccctcaggacaatgattaagg 6084692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 197
Target Start/End: Original strand, 10900286 - 10900372
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattt 197  Q
    ||||| |||||| | |||| |||| ||||| | ||||||||||| |||| ||| ||||||| ||| ||||||||||| |||| ||||    
T  10900286 cattgaaaaatgataaaaagtgatgaattttattttttaaaagttaaaatattattgaattcaatgtaaatatactatttttgattt 10900372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 43140359 - 43140417
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||| ||||||  |||||||||||||||||||||||||||| | |||| ||| |||||    
T  43140359 cattgaaaaatgacgaaaaatgataaatttaactttttaaaattaaaaatattattgaa 43140417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 114
Target Start/End: Complemental strand, 17074626 - 17074585
Alignment:
Q  73 gagggcaatgattaaggaagccaaaagtagcatgtttgcatt 114  Q
    |||||||||| ||||||||||||||| |||||| ||||||||    
T  17074626 gagggcaatggttaaggaagccaaaaatagcatatttgcatt 17074585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 176
Target Start/End: Complemental strand, 1729556 - 1729493
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaata 176  Q
    |||| ||||||||||||||||||| |||| || ||| |||||| |||| ||||||||||| ||||    
T  1729556 attgaaaaatggtgaaaaatgatagatttgac-tttgaaaagttaaaaaattgttgaattcaata 1729493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 91
Target Start/End: Original strand, 1870462 - 1870502
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaa 91  Q
    ||||||||||||||| |||||| ||||||||| ||||||||    
T  1870462 gggtcttgctaaccagtgccctcagggcaatggttaaggaa 1870502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 115
Target Start/End: Complemental strand, 34392708 - 34392645
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||||  |||||| ||||||||| |||||||| |||||||||| || ||| |||||    
T  34392708 gggtcttgctaaccggtgccctcagggcaatg-ttaaggaaaccaaaagtagtatatttacattg 34392645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 59; Significance: 8e-25; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 107 - 237
Target Start/End: Original strand, 6507421 - 6507551
Alignment:
Q  107 tttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaacca 206  Q
    |||||||||| ||||  |||||| ||| |||||||||||||||||| |||||||||||||||||| ||| || ||||||||||||| |||| ||||||||    
T  6507421 tttgcattgggaaatattgaaaagtgaaaaatttaactttttaaaaatcaaaacattgttgaattcaatgtatatatactacttttgatttccttaacca 6507520  T
Q  207 ttactctgaggacaatggttagcaagaccca 237  Q
    ||   |||||| ||  ||||||||| |||||    
T  6507521 ttgtcctgagggcaccggttagcaaaaccca 6507551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 120 - 237
Target Start/End: Original strand, 34780023 - 34780140
Alignment:
Q  120 atggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggac 219  Q
    |||||||||| |||  ||||||||||||||||||| |||||||||||||||| ||| |||||||||||||||| |||| ||||||||||   |||| |||    
T  34780023 atggtgaaaagtgaagaatttaactttttaaaagttaaaacattgttgaattcaatgtaaatatactacttttgatttccttaaccattgtcctgatgac 34780122  T
Q  220 aatggttagcaagaccca 237  Q
    |  |||||| ||||||||    
T  34780123 accggttagaaagaccca 34780140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 7875341 - 7875277
Alignment:
Q  52 ggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||||||||| ||||||||    
T  7875341 ggtcttgctaaccattgccctcggggcaatgattaaggaagccaaaagtagcatgtctgcattgg 7875277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 53 - 116
Target Start/End: Complemental strand, 26572236 - 26572173
Alignment:
Q  53 gtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||    
T  26572236 gtcttgctaaccattgccctcagggcaatggttaaggaagtcaaaagtagcatgtttgcattgg 26572173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 238
Target Start/End: Complemental strand, 10855504 - 10855379
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||| |||||| |||||| |||||||||||||||||||||||||||||  ||||||||    ||  |||||| |||||||| ||||  ||||||||| |     
T  10855504 attgaaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa-accatgcaaatatgctacttttgatttctttaaccattgcc 10855406  T
Q  212 ctgaggacaatggttagcaagacccaa 238  Q
    || ||||||||||||||||||||||||    
T  10855405 ctcaggacaatggttagcaagacccaa 10855379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 112 - 202
Target Start/End: Original strand, 14232528 - 14232618
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttctta 202  Q
    |||| ||||||||||||| |||| |||||| ||||| ||||||||||||||||| |||| |||| |||| ||||||||||| |||||||||    
T  14232528 attgaaaaatggtgaaaagtgatgaatttagcttttcaaaagtcaaaacattgtcgaatctaatgtaaacatactacttttgattttctta 14232618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 7875216 - 7875275
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||    
T  7875216 gcattggaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 7875275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 110 - 236
Target Start/End: Original strand, 7880462 - 7880588
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    ||||| ||||||| |||||| ||||||||||||||||||||||||||||| |||||||||  ||||| | | || ||||||||   || ||||| ||||     
T  7880462 gcattagaaaatgatgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaactaatacagacatgctacttttggcttccttaatcattg 7880561  T
Q  210 ctctgaggacaatggttagcaagaccc 236  Q
    | | ||||  |||||||||||||||||    
T  7880562 ccccgagggtaatggttagcaagaccc 7880588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 116
Target Start/End: Complemental strand, 16437740 - 16437678
Alignment:
Q  54 tcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||| ||||||||||||||||||||||| |||||||| |||| |||||||||||||||||||    
T  16437740 tcttgttaaccattgccctgagggcaatggttaaggaaaccaacagtagcatgtttgcattgg 16437678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 118 - 184
Target Start/End: Complemental strand, 29964367 - 29964301
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatata 184  Q
    |||||||||||||| |  |||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  29964367 aaatggtgaaaaataaataatttaactttttaaaagtcaaaacattgttgaattcaatgtaaatata 29964301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 50 - 107
Target Start/End: Complemental strand, 7880589 - 7880532
Alignment:
Q  50 agggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgt 107  Q
    |||||||||||||||||| ||||  |||||||||||||||||||||||||||||||||    
T  7880589 agggtcttgctaaccattaccctcggggcaatgattaaggaagccaaaagtagcatgt 7880532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 110 - 192
Target Start/End: Complemental strand, 12191567 - 12191485
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    ||||||| |||||||||||| |||||||||||| ||||||||||||||||  |||||||| | |||| ||| || ||||||||    
T  12191567 gcattggtaaatggtgaaaagtgataaatttaattttttaaaagtcaaaatgttgttgaaatcaatacaaacatgctactttt 12191485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 136 - 233
Target Start/End: Original strand, 12226392 - 12226489
Alignment:
Q  136 aatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggacaatggttagcaaga 233  Q
    ||||||||||||| ||||| |||||||||||||||| ||| ||||||||||| ||||  ||| ||||||||||   |||||| ||  |||||||||||    
T  12226392 aatttaactttttgaaagtaaaaacattgttgaattcaatgtaaatatactatttttggtttccttaaccattgtcctgagggcaccggttagcaaga 12226489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 183 - 239
Target Start/End: Complemental strand, 19645998 - 19645942
Alignment:
Q  183 tactacttttaattttcttaaccattactctgaggacaatggttagcaagacccaaa 239  Q
    ||||||||||| ||| |||||||||| | ||||||||||||||||||||||||||||    
T  19645998 tactacttttagtttccttaaccattgccctgaggacaatggttagcaagacccaaa 19645942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 27127550 - 27127602
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    ||||||||||||||||| |||||||||||||||||||||| | ||||||||||    
T  27127550 aaatggtgaaaaatgatgaatttaactttttaaaagtcaagatattgttgaat 27127602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 6866989 - 6866930
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||| |||||||||||||| ||||||||||||| |||||||||||||||  ||||||||    
T  6866989 gcatttgaaaatggtgaaaagtgataaatttaaccttttaaaagtcaaaatgttgttgaa 6866930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 51 - 113
Target Start/End: Original strand, 10855381 - 10855443
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcat 113  Q
    |||||||||||||||||| ||||||||||||| |||| |||  |||||||||||| |||||||    
T  10855381 gggtcttgctaaccattgtcctgagggcaatggttaaagaaatcaaaagtagcatatttgcat 10855443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 51 - 119
Target Start/End: Original strand, 19645945 - 19646013
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattggaaa 119  Q
    |||||||||||||||||| ||| ||||||||| |||||||| | |||||||| |  |||||||||||||    
T  19645945 gggtcttgctaaccattgtcctcagggcaatggttaaggaaactaaaagtagtagttttgcattggaaa 19646013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 5578348 - 5578289
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||  ||| || ||||||||||||||||||||||||||||| |||||||||    
T  5578348 gcattgaaaaataatgagaattgataaatttaactttttaaaagtcaaaatattgttgaa 5578289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 115 - 234
Target Start/End: Original strand, 26572117 - 26572236
Alignment:
Q  115 ggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctg 214  Q
    |||||||| | |||| ||||||||||||  |||||||||| |||| |||||| ||   |||  ||| || |||||||| | || |||||||||| | |||    
T  26572117 ggaaaatgataaaaagtgataaatttaatattttaaaagttaaaatattgttaaaaccaatgcaaacatgctacttttgacttccttaaccattgccctg 26572216  T
Q  215 aggacaatggttagcaagac 234  Q
    ||| ||||||||||||||||    
T  26572217 agggcaatggttagcaagac 26572236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 29692378 - 29692425
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  29692378 attgaaaaatggtgaaaagtgataaatttaactttttaagagtcaaaa 29692425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 170
Target Start/End: Complemental strand, 28014707 - 28014649
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    ||||| ||||||||||||||||| | ||| ||||||||||||| |||| ||||||||||    
T  28014707 attgggaaatggtgaaaaatgatgagtttgactttttaaaagttaaaatattgttgaat 28014649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 20775026 - 20775111
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttta 193  Q
    |||||||| ||||| ||||||||| ||||||||| ||||||||| || |||| |||||| |||| ||   |||| |||||||||||    
T  20775026 ttgcattgaaaaattgtgaaaaataataaatttatctttttaaaggttaaaatattgttaaattcaacgaaaatctactactttta 20775111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 75 - 116
Target Start/End: Original strand, 32786041 - 32786082
Alignment:
Q  75 gggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| |||||||| ||||||||||||||||||||||||    
T  32786041 gggcaatggttaaggaaaccaaaagtagcatgtttgcattgg 32786082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 114
Target Start/End: Original strand, 5578245 - 5578285
Alignment:
Q  74 agggcaatgattaaggaagccaaaagtagcatgtttgcatt 114  Q
    ||||||||| ||||||||| |||||||||||||||||||||    
T  5578245 agggcaatggttaaggaagtcaaaagtagcatgtttgcatt 5578285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 12191442 - 12191505
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||||||||| |||||||| | || ||||||| ||||||||| ||||||||||||||||| ||||    
T  12191442 gggtcttgctgaccattgctc-gatggcaatggttaaggaaggcaaaagtagcatgtttgtattg 12191505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 187
Target Start/End: Original strand, 5029513 - 5029564
Alignment:
Q  136 aatttaactttttaaaagtcaaaacattgttgaatttaatataaatatacta 187  Q
    ||||||||||||||||||| |||| | |||||||||||||| |||| |||||    
T  5029513 aatttaactttttaaaagttaaaatagtgttgaatttaatacaaatttacta 5029564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 118 - 169
Target Start/End: Original strand, 8324147 - 8324198
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||| |||||||||||||||||||||||||||||| | ||||  ||||||||    
T  8324147 aaattgtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaa 8324198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 111 - 169
Target Start/End: Original strand, 7274250 - 7274308
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    ||||||||||||  ||||| ||||||||||||| |||||||||| ||||  ||||||||    
T  7274250 cattggaaaatgacgaaaagtgataaatttaacattttaaaagttaaaatgttgttgaa 7274308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 89
Target Start/End: Original strand, 8825035 - 8825073
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaagg 89  Q
    |||||||||||||||||||| ||||||||||| ||||||    
T  8825035 gggtcttgctaaccattgccttgagggcaatggttaagg 8825073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 21186059 - 21186117
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaat 175  Q
    |||||||| |||| |||| ||||||||||||||||||| |||| ||| |||||| ||||    
T  21186059 aaaatggtaaaaagtgatgaatttaactttttaaaagttaaaatattattgaatctaat 21186117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 22414632 - 22414701
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatact 186  Q
    ||||||| ||||||| ||| | ||||||||||||||||||||||  || |||||||||||| ||| |||||    
T  22414632 gaaaatgatgaaaaaagatgattttaactttttaaaagtcaaaa-tttattgaatttaatacaaacatact 22414701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 112 - 193
Target Start/End: Complemental strand, 21427356 - 21427275
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttta 193  Q
    ||||| |||| ||||||| ||||  ||||||| ||||||||||  ||| ||||||||||| ||| ||||| ||||| |||||    
T  21427356 attgggaaatagtgaaaagtgattgatttaacattttaaaagtttaaagattgttgaattcaatgtaaatttactattttta 21427275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 91
Target Start/End: Complemental strand, 6770983 - 6770939
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaaggaa 91  Q
    ||||||||||||||||||| |||||| |||||| || ||||||||    
T  6770983 ttaagggtcttgctaaccagtgcccttagggcattggttaaggaa 6770939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 31490739 - 31490819
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||||| ||||| |||||| |||| |||||| |||| ||||||||||| |||| |||  ||||| ||||| ||| ||||||    
T  31490739 tgaaaagtgatagatttaatttttaaaaagttaaaaaattgttgaattcaatacaaacttactatttttagtttccttaac 31490819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 110 - 246
Target Start/End: Original strand, 51817347 - 51817483
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||  ||||| ||| || ||||||||   || ||||||||||     
T  51817347 gcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaaactaatacaaacatgctacttttggcttccttaaccattg 51817446  T
Q  210 ctctgaggacaatggttagcaagacccaaatttttta 246  Q
    | || |||  |||||||| ||| ||||  ||||||||    
T  51817447 ccctcagggtaatggttaacaaaacccttatttttta 51817483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 49 - 115
Target Start/End: Complemental strand, 44570549 - 44570483
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||    
T  44570549 aagggtcttgctaaccattgccctctgggcaatggttaaggaagccaaaagtagcatgtttgcattg 44570483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 47 - 116
Target Start/End: Original strand, 10854803 - 10854872
Alignment:
Q  47 ttaagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||    
T  10854803 ttaagggtcttgctaaccattgccctcgtgacaatgattaaggaagccaaaagtagcatgtttgcattgg 10854872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 111 - 236
Target Start/End: Original strand, 44570422 - 44570547
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattac 210  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||  |||||||| | |||  ||| || ||||||||   || |||||||||| |    
T  44570422 cattggaaaatggtgaaaagtgataactttaactttttaaaagtcaaaatgttgttgaaatcaatgcaaacatgctacttttggcttccttaaccattgc 44570521  T
Q  211 tctgaggacaatggttagcaagaccc 236  Q
     | |||| ||||||||||||||||||    
T  44570522 ccagagggcaatggttagcaagaccc 44570547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 31647364 - 31647252
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggacaatg 223  Q
    ||||||||||||||||||||||||||||||||||||  || ||||| | |||  ||| || ||||||||   || |||||||||| |||||| |||||||    
T  31647364 tgaaaaatgataaatttaactttttaaaagtcaaaatgttattgaaatcaatgcaaacatgctacttttggcttccttaaccattgctctga-gacaatg 31647266  T
Q  224 gttagcaagaccca 237  Q
    ||||||||||||||    
T  31647265 gttagcaagaccca 31647252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 8715536 - 8715636
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||   |||  ||| || |||||||||  || |||||||||||    
T  8715536 gcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttccttaaccatta 8715635  T
Q  210 c 210  Q
    |    
T  8715636 c 8715636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 110 - 210
Target Start/End: Original strand, 9067423 - 9067523
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||  ||||||||   |||  ||| || |||||||||  || |||||||||||    
T  9067423 gcattggaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgctacttttagcttccttaaccatta 9067522  T
Q  210 c 210  Q
    |    
T  9067523 c 9067523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 12050986 - 12051050
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||||||| ||| |||| ||||||||| ||||||||||||||||||||||||||||||||    
T  12050986 gggtcttgctaactattaccctcagggcaatggttaaggaagccaaaagtagcatgtttgcattg 12051050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 34060803 - 34060895
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||| ||||||||||||| |||| ||||||||||||||||||| |||| ||||||||||| |||  ||| | |||||||||||||| ||||||    
T  34060803 attgaaaaatggtgaaaagtgatgaatttaactttttaaaagttaaaatattgttgaattcaatgcaaacaaactacttttaatttccttaac 34060895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 139 - 207
Target Start/End: Original strand, 51256137 - 51256205
Alignment:
Q  139 ttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccat 207  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||| ||||||  ||| |||||||||    
T  51256137 ttaactttttaaaagtcaaaacattgttgaattcaatataaatataccacttttggtttccttaaccat 51256205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 37509185 - 37509126
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||    
T  37509185 gcattggaaaatagtgaaaagtgataaatttaactttttaaaagtcaaaatattgttgaa 37509126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 111 - 169
Target Start/End: Complemental strand, 46317559 - 46317501
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||    
T  46317559 cattggaaaatgatgaaaaatgataaatttaactttttaaaagtcaaaatgttgttgaa 46317501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 48 - 110
Target Start/End: Complemental strand, 51817476 - 51817414
Alignment:
Q  48 taagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttg 110  Q
    ||||||| ||| |||||||| |||||||||||||| |||||||||||||||||||||||||||    
T  51817476 taagggttttgttaaccattaccctgagggcaatggttaaggaagccaaaagtagcatgtttg 51817414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 45899580 - 45899661
Alignment:
Q  112 attggaaaatggtgaaaaa-tgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    ||||||||||| ||||||| |||| ||||||| |||||||||||||||| ||||||||||| ||| |||| |||||||||||    
T  45899580 attggaaaatgatgaaaaagtgatgaatttaaatttttaaaagtcaaaatattgttgaattcaatgtaaacatactactttt 45899661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 112 - 169
Target Start/End: Complemental strand, 52570854 - 52570797
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  52570854 attggaaaatggtgaaaagtgataaatataactttttaaaagtcaaaatattgttgaa 52570797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 4759885 - 4759944
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  4759885 gcattgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 4759944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 29915738 - 29915671
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||| ||| ||||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||    
T  29915738 aagggtattgttaaccattgacctgagaacaatgattaaggaagccaaaagtagaatgtttgcattgg 29915671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 49 - 116
Target Start/End: Complemental strand, 29964891 - 29964824
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||| ||| ||||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||    
T  29964891 aagggtattgttaaccattgacctgagaacaatgattaaggaagccaaaagtagaatgtttgcattgg 29964824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 111 - 208
Target Start/End: Original strand, 8847488 - 8847585
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatt 208  Q
    |||||||||||||| |||| |||| ||||||||||||||||||| |||| |||||||||   ||| |||| || ||||||||  ||| ||||||||||    
T  8847488 cattggaaaatggtaaaaagtgattaatttaactttttaaaagttaaaatattgttgaaaacaatgtaaacatgctacttttggtttccttaaccatt 8847585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 12905323 - 12905376
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||||||||||| |||||||||||||||  ||||||||    
T  12905323 gaaaatggtgaaaaatgataaatttaacattttaaaagtcaaaatgttgttgaa 12905376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 112 - 169
Target Start/End: Original strand, 36730190 - 36730247
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||| ||||||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  36730190 attgaaaaatggtgaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 36730247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 112 - 204
Target Start/End: Original strand, 29213397 - 29213489
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    |||| ||||||||||||||||||| |||| ||||||||||||| |||| |||| |||||| |||  |||  ||| | ||||||||||||||||    
T  29213397 attgaaaaatggtgaaaaatgatagatttgactttttaaaagttaaaaaattgctgaattcaatgcaaacttaccatttttaattttcttaac 29213489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 51 - 115
Target Start/End: Original strand, 31647253 - 31647316
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||||||||||||||||| | | || |||||| ||||||||||||||||||||||||||||||||    
T  31647253 gggtcttgctaaccattgtc-tcagagcaatggttaaggaagccaaaagtagcatgtttgcattg 31647316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 110 - 238
Target Start/End: Complemental strand, 32415643 - 32415516
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccatta 209  Q
    |||||| ||||| ||||||| | |||||||||||||||||||||||||||  ||||||||   |||  ||| ||  |||||||  ||| ||||||||||     
T  32415643 gcattgaaaaattgtgaaaagtcataaatttaactttttaaaagtcaaaatgttgttgaaaccaatgcaaacatgttacttttggtttccttaaccattg 32415544  T
Q  210 ctctgaggacaatggttagcaagacccaa 238  Q
    | |||||| |||| |||||||||||||||    
T  32415543 c-ctgagggcaatagttagcaagacccaa 32415516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 72 - 116
Target Start/End: Complemental strand, 36730293 - 36730249
Alignment:
Q  72 tgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||| |||||||||||||||||||||||||||||||||    
T  36730293 tgagggcaatggttaaggaagccaaaagtagcatgtttgcattgg 36730249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 113 - 169
Target Start/End: Original strand, 44695709 - 44695765
Alignment:
Q  113 ttggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||  ||||||||    
T  44695709 ttggaaaatggtgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaa 44695765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 8715667 - 8715597
Alignment:
Q  48 taagggtcttgctaaccat--tgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||  ||| ||| ||| |||| |||||||||| ||||||||||||||||||||||    
T  8715667 taagggtcttgctaaccatattgctctgtgggtaatggttaaggaagctaaaagtagcatgtttgcattgg 8715597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Complemental strand, 9067554 - 9067484
Alignment:
Q  48 taagggtcttgctaaccat--tgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||||  ||| ||| ||| |||| |||||||||| ||||||||||||||||||||||    
T  9067554 taagggtcttgctaaccatattgctctgtgggtaatggttaaggaagctaaaagtagcatgtttgcattgg 9067484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 10854933 - 10854874
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||||||||||||||||| | |||||||||||||||||||||| ||||  ||||||||    
T  10854933 gcattggaaaatggtgaaaactaataaatttaactttttaaaagttaaaatgttgttgaa 10854874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 29915612 - 29915659
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  29915612 attggaaaatggtaaaaaattataaatttaactttttaaaagtcaaaa 29915659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 112 - 159
Target Start/End: Original strand, 29964765 - 29964812
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||    
T  29964765 attggaaaatggtaaaaaattataaatttaactttttaaaagtcaaaa 29964812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 46317433 - 46317499
Alignment:
Q  49 aagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||| ||||||||||||||||| ||  ||||| |||||||||||||||||| ||||||||||||||    
T  46317433 aagggttttgctaaccattgccctcaga-caatggttaaggaagccaaaagtaacatgtttgcattgg 46317499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 113 - 175
Target Start/End: Complemental strand, 11317037 - 11316975
Alignment:
Q  113 ttggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaat 175  Q
    ||||||||||||||||| | || |||||||||||||||||||||||| ||| |||||| ||||    
T  11317037 ttggaaaatggtgaaaagttatgaatttaactttttaaaagtcaaaatattattgaatctaat 11316975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 51 - 116
Target Start/End: Original strand, 32415518 - 32415582
Alignment:
Q  51 gggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||| |||||||| ||| ||||| |||||||| ||||||||| ||||||||||||||    
T  32415518 gggtcttgctaactattgccctcagg-caatggttaaggaaaccaaaagtaacatgtttgcattgg 32415582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 111 - 159
Target Start/End: Complemental strand, 35306405 - 35306357
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||||||||| |||||| |||||||||||||||||||||||| ||||    
T  35306405 cattggaaaatgatgaaaagtgataaatttaactttttaaaagttaaaa 35306357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 112 - 184
Target Start/End: Complemental strand, 39436537 - 39436465
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatata 184  Q
    |||| ||||||||||||||| |  ||||||||||||||||||||| |||||| |||||| | || ||||||||    
T  39436537 attgaaaaatggtgaaaaataaagaatttaactttttaaaagtcagaacattattgaatctgatgtaaatata 39436465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 166
Target Start/End: Original strand, 49976185 - 49976232
Alignment:
Q  119 aatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgtt 166  Q
    ||||||||||| |||| |||||||||||||||||||||||| ||||||    
T  49976185 aatggtgaaaagtgatgaatttaactttttaaaagtcaaaatattgtt 49976232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 18820 - 18882
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    ||||||||| ||| |||||||| |||| ||||||||||||||||| | |||| ||||||||||    
T  18820 ttgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 18882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 18961 - 19023
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    ||||||||| ||| |||||||| |||| ||||||||||||||||| | |||| ||||||||||    
T  18961 ttgcattgggaaacggtgaaaagtgatgaatttaactttttaaaaattaaaatattgttgaat 19023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 21324591 - 21324530
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    |||||||||||| || |||||| ||||| |||||||||||||||||| |||| ||||||||||    
T  21324591 ttgcattggaaa-tgatgaaaagtgatagatttaactttttaaaagttaaaatattgttgaat 21324530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 48313875 - 48313933
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    ||||| ||||||||||||  || |||||| ||||||||||| |||||||||||||||||    
T  48313875 attgggaaatggtgaaaagcgaaaaatttgactttttaaaaatcaaaacattgttgaat 48313933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 116
Target Start/End: Complemental strand, 12905415 - 12905378
Alignment:
Q  79 aatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  12905415 aatgattaaggaagcaaaaagtagcatgtttgcattgg 12905378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 112 - 192
Target Start/End: Original strand, 13647073 - 13647156
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaacttttta---aaagtcaaaacattgttgaatttaatataaatatactactttt 192  Q
    |||| ||||| ||||||| |||| ||||||||||||||   ||| | |||||||||||||||| ||||||||  ||||||||||    
T  13647073 attgaaaaatagtgaaaagtgatgaatttaactttttactaaaaattaaaacattgttgaattcaatataaacctactactttt 13647156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 154
Target Start/End: Complemental strand, 33641323 - 33641282
Alignment:
Q  113 ttggaaaatggtgaaaaatgataaatttaactttttaaaagt 154  Q
    ||||||| ||||||||||||||||||| ||||||||||||||    
T  33641323 ttggaaattggtgaaaaatgataaattcaactttttaaaagt 33641282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 115
Target Start/End: Original strand, 35306303 - 35306344
Alignment:
Q  74 agggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||| |||||||| |||||||||||||||||||||||    
T  35306303 agggcaatgcttaaggaaaccaaaagtagcatgtttgcattg 35306344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 236
Target Start/End: Complemental strand, 12051098 - 12050986
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattactctgaggacaatg 223  Q
    ||||||||||||||||||||||||||||| | ||||  ||||||||   |||  ||| || ||||||||   || |||||||||| | ||||||  |||     
T  12051098 tgaaaaatgataaatttaactttttaaaaattaaaatgttgttgaaaacaatgcaaacatgctacttttggcttccttaaccattgccctgagggtaata 12050999  T
Q  224 gttagcaagaccc 236  Q
    |||||||||||||    
T  12050998 gttagcaagaccc 12050986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 41346047 - 41345923
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||| ||||| ||||||| | |||||||||| ||||||||||| |||| |||||||||   |||  ||| |   || ||||   ||||||||||||||||    
T  41346047 attgaaaaatagtgaaaagtaataaatttaattttttaaaagttaaaatattgttgaaaccaatgcaaacaatatatttttgcctttcttaaccattact 41345948  T
Q  212 ctgaggacaatggttagcaagaccc 236  Q
    || | || |||||||||||||||||    
T  41345947 cttatgataatggttagcaagaccc 41345923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 271202 - 271261
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    |||||||||| | | |||||| || ||||| ||||||||||||| |||||||||||||||    
T  271202 cattggaaaacgataaaaaataatgaatttgactttttaaaagttaaaacattgttgaat 271261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 115
Target Start/End: Complemental strand, 8847600 - 8847549
Alignment:
Q  64 cattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    ||||||||| | ||||||| |||||||| ||||||||||||||||| |||||    
T  8847600 cattgccctcatggcaatggttaaggaaaccaaaagtagcatgtttacattg 8847549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 112 - 171
Target Start/End: Original strand, 12060096 - 12060155
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    ||||||||||| |||||| ||||| |||| | ||||||||||| |||| |||||||||||    
T  12060096 attggaaaatgatgaaaagtgatagatttgagtttttaaaagttaaaaaattgttgaatt 12060155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 34750293 - 34750352
Alignment:
Q  111 cattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    ||||||||| ||||||||| |||| |||||||||||||| || | |||| ||||||||||    
T  34750293 cattggaaactggtgaaaagtgatgaatttaactttttataaattaaaatattgttgaat 34750352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 118 - 204
Target Start/End: Original strand, 3304972 - 3305057
Alignment:
Q  118 aaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    ||||| ||||||||||| ||||||| ||||||||| |  ||| ||| || |||| |||||||||||||||||| | |||| ||||||    
T  3304972 aaatgatgaaaaatgatgaatttaattttttaaaaattgaaatatt-ttaaattcaatataaatatactacttatgatttccttaac 3305057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 102
Target Start/End: Complemental strand, 20406715 - 20406661
Alignment:
Q  48 taagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtag 102  Q
    ||||||||||||||| || |||||| || ||||||||||||||| ||| ||||||    
T  20406715 taagggtcttgctaatcagtgccctaagagcaatgattaaggaatccataagtag 20406661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 199 - 237
Target Start/End: Original strand, 30567651 - 30567689
Alignment:
Q  199 cttaaccattactctgaggacaatggttagcaagaccca 237  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  30567651 cttaaccattactctgagggtaatggttagcaagaccca 30567689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 124 - 202
Target Start/End: Original strand, 35069657 - 35069735
Alignment:
Q  124 tgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttctta 202  Q
    |||||| |||| ||||||| |||||||||||  ||| ||| |||||| |||||||||  | ||||||||||||| ||||    
T  35069657 tgaaaagtgatgaatttaaatttttaaaagtttaaatattattgaatctaatataaaattgctacttttaatttcctta 35069735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 39974839 - 39974901
Alignment:
Q  108 ttgcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaat 170  Q
    ||||||| ||||||| ||| || |||| ||||||||||||||||||| |||| | ||||||||    
T  39974839 ttgcattagaaaatgatgagaagtgatgaatttaactttttaaaagttaaaatagtgttgaat 39974901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 159
Target Start/End: Original strand, 20227415 - 20227464
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaa 159  Q
    |||||| |||||| |||||| ||||||||||||||| |||||||| ||||    
T  20227415 gcattgaaaaatgatgaaaagtgataaatttaacttcttaaaagttaaaa 20227464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 171
Target Start/End: Complemental strand, 50420742 - 50420697
Alignment:
Q  126 aaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||| ||||| |||||||||||||||||| |||| |||||||||||    
T  50420742 aaaagtgatagatttaactttttaaaagttaaaaaattgttgaatt 50420697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 116
Target Start/End: Original strand, 52570728 - 52570795
Alignment:
Q  48 taagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagc--atgtttgcattgg 116  Q
    |||||||||||||||||||||| || |   ||||| ||||||| ||||||||||||  |||||||||||||    
T  52570728 taagggtcttgctaaccattgctctca---caatggttaaggatgccaaaagtagcatatgtttgcattgg 52570795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 84 - 116
Target Start/End: Complemental strand, 4759978 - 4759946
Alignment:
Q  84 ttaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||||||||||||| ||||||||||||||    
T  4759978 ttaaggaagccaaaagtaacatgtttgcattgg 4759946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144 (Bit Score: 54; Significance: 8e-22; HSPs: 2)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 112 - 236
Target Start/End: Complemental strand, 39659 - 39537
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaaccattact 211  Q
    |||||||||| ||||||| |||  ||||||||||||||||||||||  |||||||||||| ||| ||||||||||||||||  ||| |||||||||| |     
T  39659 attggaaaatagtgaaaactgaagaatttaactttttaaaagtcaa--cattgttgaattcaatgtaaatatactacttttggtttccttaaccattgcc 39562  T
Q  212 ctgaggacaatggttagcaagaccc 236  Q
    |||||| |   ||||||||||||||    
T  39561 ctgagggcttcggttagcaagaccc 39537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0144; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 39534 - 39601
Alignment:
Q  48 taagggtcttgctaaccattgccctgagggcaatgattaaggaagccaaaagtagcatgtttgcattg 115  Q
    |||||||||||||||||   ||||| ||||||||| |||||||| |||||||||| || ||| |||||    
T  39534 taagggtcttgctaaccgaagccctcagggcaatggttaaggaaaccaaaagtagtatatttacattg 39601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 204
Target Start/End: Original strand, 8772 - 8861
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttt-taaaagtcaaaacattgttgaatttaatataaatatactacttttaattttcttaac 204  Q
    ||||||| ||||||||||| |||||||||||| |||||||||| | || ||||||| | ||| |||| |||||||||| |||||||||||    
T  8772 gaaaatgatgaaaaatgatgaatttaacttttttaaaagtcaatatatcgttgaatcttatacaaatctactacttttgattttcttaac 8861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 6)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 16812 - 16865
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |||||||||    
T  16812 gaaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaa 16865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 26980 - 27033
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |||||||||    
T  26980 gaaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaa 27033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 116 - 169
Target Start/End: Original strand, 37146 - 37199
Alignment:
Q  116 gaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||||||||||||| |||||||||||||||||||| |||||||||    
T  37146 gaaaatagtgaaaaatgataaatgtaactttttaaaagtcaaaatattgttgaa 37199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 16908 - 16867
Alignment:
Q  75 gggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  16908 gggcaatggttaaggaagccaaaagtagcatgtttgcattgg 16867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 27076 - 27035
Alignment:
Q  75 gggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  27076 gggcaatggttaaggaagccaaaagtagcatgtttgcattgg 27035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #6
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 75 - 116
Target Start/End: Complemental strand, 37242 - 37201
Alignment:
Q  75 gggcaatgattaaggaagccaaaagtagcatgtttgcattgg 116  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  37242 gggcaatggttaaggaagccaaaagtagcatgtttgcattgg 37201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 392167 - 392226
Alignment:
Q  110 gcattggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaa 169  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||||||  ||||||||    
T  392167 gcattgaaaaatggtaaaaagtgataaatttaactttttaaaagtcaaaatgttgttgaa 392226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 121 - 171
Target Start/End: Original strand, 11093 - 11143
Alignment:
Q  121 tggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttgaatt 171  Q
    |||||||||| ||| ||||||||||||||||||| |||| |||||| ||||    
T  11093 tggtgaaaaaagatgaatttaactttttaaaagttaaaatattgttaaatt 11143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2122 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold2122
Description:

Target: scaffold2122; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 655 - 711
Alignment:
Q  112 attggaaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgttga 168  Q
    |||||||||||||||||| |  | |||| |||||||||||||| |||| ||||||||    
T  655 attggaaaatggtgaaaagttgtgaattcaactttttaaaagttaaaaaattgttga 711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 9050 - 9098
Alignment:
Q  117 aaaatggtgaaaaatgataaatttaactttttaaaagtcaaaacattgt 165  Q
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T  9050 aaaatggtgaaaagtgttgaattcaactttttaaaagtcaaaaaattgt 9098  T

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