View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6698_low_30 (Length: 443)

Name: NF6698_low_30
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6698_low_30
NF6698_low_30
[»] chr5 (25 HSPs)
chr5 (16-443)||(37412621-37413048)
chr5 (317-407)||(37400193-37400283)
chr5 (317-407)||(37640561-37640651)
chr5 (317-407)||(37703357-37703447)
chr5 (317-407)||(37712313-37712403)
chr5 (317-407)||(37697476-37697566)
chr5 (317-416)||(37533789-37533888)
chr5 (325-407)||(37392339-37392421)
chr5 (119-237)||(37824386-37824504)
chr5 (119-237)||(37400363-37400481)
chr5 (317-407)||(37436396-37436486)
chr5 (317-407)||(37824584-37824674)
chr5 (16-88)||(37640240-37640312)
chr5 (27-115)||(37824274-37824362)
chr5 (119-201)||(37429223-37429305)
chr5 (119-237)||(37697278-37697396)
chr5 (19-88)||(37400532-37400601)
chr5 (21-88)||(37436080-37436147)
chr5 (119-218)||(37436198-37436297)
chr5 (317-407)||(37595013-37595103)
chr5 (19-88)||(37594695-37594764)
chr5 (119-218)||(37533591-37533690)
chr5 (119-218)||(37712115-37712214)
chr5 (19-88)||(37533471-37533540)
chr5 (119-211)||(37640363-37640455)
[»] chr4 (1 HSPs)
chr4 (317-407)||(16842257-16842347)
[»] chr3 (2 HSPs)
chr3 (358-407)||(14553768-14553817)
chr3 (19-115)||(14553481-14553577)


Alignment Details
Target: chr5 (Bit Score: 400; Significance: 0; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 16 - 443
Target Start/End: Complemental strand, 37413048 - 37412621
Alignment:
Q  16 tcactgaggtacaactctaataaagaaaacaaataataacaccaatgaggatttgttccatctaacatgttattatttaaatccacaatactcaattttg 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  37413048 tcactgaggtacaactctaataaagaaaacaaataataacaccaatgaggatttgttccatttaacattttattatttaaatccacaatactcaattttg 37412949  T
Q  116 gatattgggccaactaatttattaaatgataaatctaaataagaaagttgagctagatggaacaatgatgagggaatttgacctgtaatgttgttagagg 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37412948 gatattgggccaactaatttattaaatgataaatctaaataagaaagttgagctagatggaacaatgatgagggaatttgacctgtaatgttgttagagg 37412849  T
Q  216 aaatatctaaatattctaatttaataagcttatggaacatattcaagatcaaaccggtaaagctattttgttcaagatgcaagtaagtgagatgtgcgag 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||||||||||||||||||    
T  37412848 aaatatctaaatattctaatttaataagcttatggaacatattcaagatcaaaccggtaaaggcattttgttcaagatccaagtaagtgagatgtgcgag 37412749  T
Q  316 atttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaatcaatcca 415  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37412748 atttgaaagtaatgatgggatttcaccgttaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaatcaatcca 37412649  T
Q  416 tgcaaatcacatgctttaagcgataact 443  Q
    ||||||||||||||||||||||||||||    
T  37412648 tgcaaatcacatgctttaagcgataact 37412621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 317 - 407
Target Start/End: Complemental strand, 37400283 - 37400193
Alignment:
Q  317 tttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    ||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||    
T  37400283 tttgaaagtaatggtgagatctcaccgttaagtttattaaatgaaaggtccaaatatgttagttgggtgaggttccacaaagatagaggaa 37400193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 37640561 - 37640651
Alignment:
Q  317 tttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    ||||||||||||| |||||| |||||  ||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||    
T  37640561 tttgaaagtaatggtgagatctcaccattaagtttattaaatgaaaggtccaaatatgttagttgggtgaggttccacaaagatagaggaa 37640651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 37703357 - 37703447
Alignment:
Q  317 tttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    ||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||| ||||||||| ||||| ||||| |||||| ||||||    
T  37703357 tttgaaagtaatggtgagatctcaccgttaagtttattaaatgaaaggtccaaatatgttagttgggtgagattccacaaagatagaggaa 37703447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 37712313 - 37712403
Alignment:
Q  317 tttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    ||||||||||||| |||||| |||||| ||||||| || |||||||||||||||||||||||||| ||||| ||||| |||||| ||||||    
T  37712313 tttgaaagtaatggtgagatctcaccgttaagtttattcaatgaaaggtccaaatgtgttagttgggtgagattccacaaagatagaggaa 37712403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 37697476 - 37697566
Alignment:
Q  317 tttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    ||||||||||||| |||||| |||||| ||||||| |||  |||||| ||||||| ||||||||||||||||||||| |||||| ||||||    
T  37697476 tttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagaggaa 37697566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 317 - 416
Target Start/End: Original strand, 37533789 - 37533888
Alignment:
Q  317 tttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaatcaatccat 416  Q
    ||||||||||||| |||||| |||||| ||||||| |||  |||||| ||||||| ||||||||| ||||||||||| |||||| |||||| || |||||    
T  37533789 tttgaaagtaatggtgagatctcaccgttaagtttattatgtgaaagatccaaatatgttagttgggtgaggttccacaaagatagaggaaccattccat 37533888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 325 - 407
Target Start/End: Complemental strand, 37392421 - 37392339
Alignment:
Q  325 taatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    ||||| |||||| |||||| ||||||| ||   |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  37392421 taatggtgagatctcaccgttaagtttattttgtgaaaggtccaaatgtgttagttgagtgaggttccacaaagatagaggaa 37392339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 37824386 - 37824504
Alignment:
Q  119 attgggccaactaatttattaaatgataaatctaaataagaaagttgagctagatggaacaatgatgagggaatttgacctgtaatgttgttagaggaaa 218  Q
    ||||||||||||| ||| ||| ||||||||| |||||||||||| |||| |||||| || | |||||| |||| ||| ||||| | ||||||||||||||    
T  37824386 attgggccaactagtttgttagatgataaatataaataagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttagaggaaa 37824485  T
Q  219 tatctaaatattctaattt 237  Q
       |||||||||| |||||    
T  37824486 gtgctaaatattccaattt 37824504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 37400481 - 37400363
Alignment:
Q  119 attgggccaactaatttattaaatgataaatctaaataagaaagttgagctagatggaacaatgatgagggaatttgacctgtaatgttgttagaggaaa 218  Q
    ||||||||||||| ||| ||| ||||||||| ||||| |||||| |||| |||||| || | |||||| |||| ||| ||||| | ||||||||||||||    
T  37400481 attgggccaactagtttgttagatgataaatataaatgagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttagaggaaa 37400382  T
Q  219 tatctaaatattctaattt 237  Q
       |||||||||| |||||    
T  37400381 gtgctaaatattccaattt 37400363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 37436396 - 37436486
Alignment:
Q  317 tttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    ||||||||||||| ||| || |||| | ||||||| ||   |||||||||||||| ||||||||||||||||||||| |||||| ||||||    
T  37436396 tttgaaagtaatggtgaaatctcactgttaagtttatttcttgaaaggtccaaatatgttagttgagtgaggttccacaaagatagaggaa 37436486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 37824584 - 37824674
Alignment:
Q  317 tttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    ||||||||||||| |||||| |||||| |||| || ||   |||||||||||||| ||||||||| ||||||||||| |||||| ||||||    
T  37824584 tttgaaagtaatggtgagatctcaccgttaagcttattttgtgaaaggtccaaatatgttagttgggtgaggttccacaaagatagaggaa 37824674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 16 - 88
Target Start/End: Original strand, 37640240 - 37640312
Alignment:
Q  16 tcactgaggtacaactctaataaagaaaacaaataataacaccaatgaggatttgttccatctaacatgttat 88  Q
    |||||||||||||||||||| || |||  |||| ||||||||||||| ||| ||||||||| |||||||||||    
T  37640240 tcactgaggtacaactctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttat 37640312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 27 - 115
Target Start/End: Original strand, 37824274 - 37824362
Alignment:
Q  27 caactctaataaagaaaacaaataataacaccaatgaggatttgttccatctaacatgttattatttaaatccacaatactcaattttg 115  Q
    ||||||||| || |||  |||| ||||||||||||| ||| ||||||||| ||||||||||    ||||||||||||||||||||||||    
T  37824274 caactctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttaaagcttaaatccacaatactcaattttg 37824362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 37429223 - 37429305
Alignment:
Q  119 attgggccaactaatttattaaatgataaatctaaataagaaagttgagctagatggaacaatgatgagggaatttgacctgt 201  Q
    ||||||||| ||||||||||||| |||||||||||   |||||| |||| |||||| ||||||||||| |||| ||| |||||    
T  37429223 attgggccatctaatttattaaacgataaatctaacatagaaagctgagttagatgaaacaatgatgatggaacttggcctgt 37429305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 37697278 - 37697396
Alignment:
Q  119 attgggccaactaatttattaaatgataaatctaaataagaaagttgagctagatggaacaatgatgagggaatttgacctgtaatgttgttagaggaaa 218  Q
    ||||| ||||||| ||| |||||||||||| |||||| |||||| || | |||||| || | |||||| |||| ||| ||||| | ||||||||||||||    
T  37697278 attggcccaactagtttgttaaatgataaacctaaatgagaaaggtggggtagatgaaaaagtgatgatggaacttggcctgttaggttgttagaggaaa 37697377  T
Q  219 tatctaaatattctaattt 237  Q
       |||||||||| |||||    
T  37697378 gtgctaaatattccaattt 37697396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 88
Target Start/End: Complemental strand, 37400601 - 37400532
Alignment:
Q  19 ctgaggtacaactctaataaagaaaacaaataataacaccaatgaggatttgttccatctaacatgttat 88  Q
    ||||||||||||||||| || |||  |||| ||||||||||||| ||| ||||||||| |||||||||||    
T  37400601 ctgaggtacaactctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttat 37400532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 37436080 - 37436147
Alignment:
Q  21 gaggtacaactctaataaagaaaacaaataataacaccaatgaggatttgttccatctaacatgttat 88  Q
    ||||||||||||||| || |||  ||||||||||||||| || ||| ||||||||| |||||||||||    
T  37436080 gaggtacaactctaacaatgaaggcaaataataacaccactgtggaattgttccatttaacatgttat 37436147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 218
Target Start/End: Original strand, 37436198 - 37436297
Alignment:
Q  119 attgggccaactaatttattaaatgataaatctaaataagaaagttgagctagatggaacaatgatgagggaatttgacctgtaatgttgttagaggaaa 218  Q
    ||||||||||||| ||| ||||||||||||||||||| |||||| || | |||||| || | |||||| |||| ||| ||||| | | |||| |||||||    
T  37436198 attgggccaactagtttgttaaatgataaatctaaatgagaaaggtggggtagatgaaaaagtgatgatggaacttggcctgttaggctgttggaggaaa 37436297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 407
Target Start/End: Original strand, 37595013 - 37595103
Alignment:
Q  317 tttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    ||||||||||||| |||||| ||||||  ||| || ||| |||||||   ||||| ||||||||| ||||||||||| |||||| ||||||    
T  37595013 tttgaaagtaatggtgagatctcaccgtcaagcttattatatgaaagactcaaatatgttagttgggtgaggttccacaaagatagaggaa 37595103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 37594695 - 37594764
Alignment:
Q  19 ctgaggtacaactctaataaagaaaacaaataataacaccaatgaggatttgttccatctaacatgttat 88  Q
    ||||||||||| ||||| || |||  |||| ||||||||||||| ||| ||||||||| |||||||||||    
T  37594695 ctgaggtacaattctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttat 37594764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 218
Target Start/End: Original strand, 37533591 - 37533690
Alignment:
Q  119 attgggccaactaatttattaaatgataaatctaaataagaaagttgagctagatggaacaatgatgagggaatttgacctgtaatgttgttagaggaaa 218  Q
    ||||| ||||||| ||| ||| |||||||| |||||  |||||| |||| |||||| || | |||||| |||| ||| ||||| | ||||||||||||||    
T  37533591 attggcccaactagtttgttatatgataaacctaaaatagaaaggtgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttagaggaaa 37533690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 119 - 218
Target Start/End: Original strand, 37712115 - 37712214
Alignment:
Q  119 attgggccaactaatttattaaatgataaatctaaataagaaagttgagctagatggaacaatgatgagggaatttgacctgtaatgttgttagaggaaa 218  Q
    ||||||||||||| ||| |||  || ||||| ||||| |||||| |||| |||||| || | |||||| |||| ||| ||||| | ||||||||||||||    
T  37712115 attgggccaactagtttgttatctgctaaatataaatgagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgttagaggaaa 37712214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 19 - 88
Target Start/End: Original strand, 37533471 - 37533540
Alignment:
Q  19 ctgaggtacaactctaataaagaaaacaaataataacaccaatgaggatttgttccatctaacatgttat 88  Q
    |||||||  |||||||| || |||  |||| ||||||||||||| ||| ||||||||| |||||||||||    
T  37533471 ctgaggtgtaactctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttat 37533540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 119 - 211
Target Start/End: Original strand, 37640363 - 37640455
Alignment:
Q  119 attgggccaactaatttattaaatgataaatctaaataagaaagttgagctagatggaacaatgatgagggaatttgacctgtaatgttgtta 211  Q
    ||||||||||||| ||| ||| ||| ||||| ||||| |||||| |||| |||||| || | |||||| |||| ||| ||||| | |||||||    
T  37640363 attgggccaactagtttgttatatgctaaatataaatgagaaagatgaggtagatgaaaaagtgatgatggaacttggcctgttaggttgtta 37640455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 407
Target Start/End: Complemental strand, 16842347 - 16842257
Alignment:
Q  317 tttgaaagtaatgatgagatttcaccggtaagtttgttaaatgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    ||||||||||||| |||||| |||||| ||||||| |||  |||||| ||||||| ||||||||||||||||||||| |||||| ||||||    
T  16842347 tttgaaagtaatggtgagatctcaccgttaagtttattatttgaaagatccaaatatgttagttgagtgaggttccacaaagatagaggaa 16842257  T

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Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 407
Target Start/End: Original strand, 14553768 - 14553817
Alignment:
Q  358 tgaaaggtccaaatgtgttagttgagtgaggttccataaagattgaggaa 407  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||||||    
T  14553768 tgaaaggtccaaatgtgttagttgagtgaggttccacaaagatagaggaa 14553817  T

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Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 115
Target Start/End: Original strand, 14553481 - 14553577
Alignment:
Q  19 ctgaggtacaactctaataaagaaaacaaataataacaccaatgaggatttgttccatctaacatgttattatttaaatccacaatactcaattttg 115  Q
    |||||| | |||||||| || |||  |||| ||||||||||||| ||| ||||||||| ||||||||||| | |||||||||||   ||||||||||    
T  14553481 ctgagggataactctaacaacgaaggcaaagaataacaccaatgtggaattgttccatttaacatgttataacttaaatccacatagctcaattttg 14553577  T

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