View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6698_low_45 (Length: 376)
Name: NF6698_low_45
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6698_low_45 |
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Alignment Details
Target: chr7 (Bit Score: 332; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 332; E-Value: 0
Query Start/End: Original strand, 2 - 357
Target Start/End: Original strand, 9072197 - 9072552
Alignment:
| Q |
2 |
catcacatgaatacaaacccaataatattcttgactgagtcactgcattaggacttagaggcactcctttgaacccttttccttccattatcttcctcca |
101 |
Q |
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| T |
9072197 |
catcacatgaatacaaacccaataatattcttgactgagtcactgcattaggacttagaggcactcctttgaaccctttcccttccattatcttcctcca |
9072296 |
T |
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| Q |
102 |
tttctccaacctctcatgcctctctatcctctcttcaccttcacatgccacgatgttccgaatctccggtgcaaatatatactgctccaccttagccctt |
201 |
Q |
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| T |
9072297 |
tttctccaacctctcatgtctctctattctttcctcaccttcacatgccacgatgttccgaatctccggtgcaaatatatactgctctaccttagccctt |
9072396 |
T |
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| Q |
202 |
ggtgctgattccacaggaaaagtggcgtccaaggagtcgaaaattgcggagtagtaatgcaaagcctcgagaaatcggcccaaaaagtacggtccgttat |
301 |
Q |
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| T |
9072397 |
ggtgctgattccacaggaaaagtggcgtccaaggagtcgaaaattgcggagtagtaatgcaaagcctcgagaaatcggcccaaaaagtacggtccgttat |
9072496 |
T |
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| Q |
302 |
ggcttgcttcttgctctacaagtgttactatgtttggtgcttggtctcttatcatg |
357 |
Q |
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| T |
9072497 |
ggcttgcttcttgctctacaagtgttactatgtttggtgcttggtctcttatcatg |
9072552 |
T |
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