View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6698_low_61 (Length: 298)

Name: NF6698_low_61
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6698_low_61
NF6698_low_61
[»] chr5 (15 HSPs)
chr5 (136-285)||(21067610-21067760)
chr5 (136-269)||(36603645-36603778)
chr5 (136-269)||(24233170-24233303)
chr5 (146-225)||(19187144-19187223)
chr5 (136-244)||(28988364-28988474)
chr5 (148-238)||(39753297-39753387)
chr5 (137-232)||(36974059-36974154)
chr5 (133-230)||(1179939-1180036)
chr5 (133-194)||(6677076-6677137)
chr5 (136-244)||(14122896-14123003)
chr5 (133-174)||(24434108-24434149)
chr5 (137-193)||(12383956-12384012)
chr5 (46-90)||(21067576-21067620)
chr5 (136-214)||(38282491-38282569)
chr5 (208-265)||(10032183-10032240)
[»] chr1 (14 HSPs)
chr1 (133-269)||(19940549-19940684)
chr1 (138-247)||(1408615-1408724)
chr1 (136-269)||(48611679-48611814)
chr1 (133-243)||(46289778-46289887)
chr1 (139-267)||(4941149-4941274)
chr1 (136-243)||(34663104-34663211)
chr1 (137-269)||(6754063-6754195)
chr1 (138-194)||(42514267-42514323)
chr1 (136-241)||(32022592-32022697)
chr1 (133-185)||(16074040-16074092)
chr1 (133-237)||(17063854-17063957)
chr1 (137-269)||(45484990-45485121)
chr1 (142-268)||(43456656-43456782)
chr1 (133-197)||(48768294-48768358)
[»] chr8 (10 HSPs)
chr8 (133-244)||(40995796-40995907)
chr8 (138-269)||(9799200-9799331)
chr8 (133-244)||(15111846-15111957)
chr8 (137-269)||(6108559-6108689)
chr8 (150-243)||(7222824-7222913)
chr8 (204-274)||(885759-885828)
chr8 (87-117)||(10292225-10292255)
chr8 (133-243)||(27415232-27415341)
chr8 (136-173)||(7302392-7302429)
chr8 (136-185)||(7304993-7305042)
[»] scaffold0272 (1 HSPs)
scaffold0272 (136-265)||(6101-6230)
[»] chr4 (14 HSPs)
chr4 (136-269)||(19328815-19328948)
chr4 (133-225)||(27756461-27756553)
chr4 (137-269)||(43159850-43159981)
chr4 (134-214)||(3427858-3427938)
chr4 (138-240)||(2652915-2653017)
chr4 (136-244)||(3913646-3913754)
chr4 (137-243)||(20032911-20033017)
chr4 (156-269)||(25474602-25474715)
chr4 (133-238)||(46871288-46871393)
chr4 (133-243)||(37193577-37193688)
chr4 (133-236)||(38509919-38510021)
chr4 (228-269)||(46696080-46696121)
chr4 (146-194)||(21858869-21858917)
chr4 (146-194)||(21914732-21914780)
[»] chr3 (8 HSPs)
chr3 (137-276)||(36563054-36563192)
chr3 (138-244)||(8936055-8936161)
chr3 (137-276)||(36545122-36545260)
chr3 (136-217)||(1294908-1294989)
chr3 (136-238)||(42388734-42388836)
chr3 (138-239)||(42411032-42411133)
chr3 (136-270)||(43178596-43178730)
chr3 (133-194)||(50175347-50175408)
[»] chr7 (7 HSPs)
chr7 (133-274)||(37720499-37720639)
chr7 (133-269)||(28710341-28710476)
chr7 (133-239)||(42468925-42469030)
chr7 (133-196)||(15972157-15972220)
chr7 (136-239)||(30486930-30487033)
chr7 (135-192)||(47903911-47903968)
chr7 (208-268)||(7883003-7883062)
[»] scaffold0316 (1 HSPs)
scaffold0316 (137-269)||(1280-1412)
[»] chr2 (10 HSPs)
chr2 (137-249)||(4614249-4614360)
chr2 (137-197)||(25627396-25627456)
chr2 (136-244)||(27322743-27322851)
chr2 (136-269)||(9521013-9521147)
chr2 (145-267)||(16634422-16634544)
chr2 (133-244)||(6983156-6983265)
chr2 (137-194)||(1991934-1991991)
chr2 (133-234)||(3037404-3037504)
chr2 (136-244)||(9116378-9116486)
chr2 (208-264)||(6709907-6709963)
[»] scaffold0027 (1 HSPs)
scaffold0027 (137-197)||(14224-14284)
[»] scaffold0009 (1 HSPs)
scaffold0009 (187-243)||(106467-106522)


Alignment Details
Target: chr5 (Bit Score: 107; Significance: 1e-53; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 136 - 285
Target Start/End: Original strand, 21067610 - 21067760
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| || || |||||||||||||| |||||||||||||||||    
T  21067610 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaagcataaaaagtagtactttcattttaaaacttccttttttgagtttcctt 21067709  T
Q  236 aaccagtgcaccggggataccggttaacatgacca-ttttttctgtgatgt 285  Q
    |||||||||||||| |  | ||||||||||||||| |||||||||||||||    
T  21067710 aaccagtgcaccggaggcatcggttaacatgaccatttttttctgtgatgt 21067760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 136 - 269
Target Start/End: Complemental strand, 36603778 - 36603645
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    ||||||| |||||||||| ||||| |||||||||||||| ||||||||||||||||||||||   || |||||||||||||||||||||| || ||||||    
T  36603778 tcaaatgcagtaagtattgcattggaacttgtgttgtcaactcttcaaaaacataaaaagtgtcactttcattttaaaactttctttttttaggttcctt 36603679  T
Q  236 aaccagtgcaccggggataccggttaacatgacc 269  Q
    ||| ||||| || ||| ||| |||||||||||||    
T  36603678 aactagtgcccccggggtactggttaacatgacc 36603645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 136 - 269
Target Start/End: Original strand, 24233170 - 24233303
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    ||||||||| |||||||| ||||| |||||||| ||||| || |||||||| |||||||||| | || |||| || |||||| ||||||| |||||||||    
T  24233170 tcaaatgtaataagtattgcattggaacttgtgctgtcaacttttcaaaaatataaaaagtgttactttcatcttcaaacttcctttttttagtttcctt 24233269  T
Q  236 aaccagtgcaccggggataccggttaacatgacc 269  Q
    ||||||||  |||| | |||  ||||||||||||    
T  24233270 aaccagtgtcccggaggtactagttaacatgacc 24233303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 146 - 225
Target Start/End: Original strand, 19187144 - 19187223
Alignment:
Q  146 taagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttctttttt 225  Q
    ||||| ||||||||||| ||||||||||| |||||||||| ||||||||||| || | ||||||||||||||||||||||    
T  19187144 taagttttacattgaaatttgtgttgtcaactcttcaaaagcataaaaagtgttgttttcattttaaaactttctttttt 19187223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 28988474 - 28988364
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaa--gtggtgctgtcattttaaaactttcttttttgagtttcc 233  Q
    |||||||| |||| ||||||||||||| |||||| |||| || ||||||| ||||||||  ||| | || ||||||||||| || ||||||| |||||||    
T  28988474 tcaaatgtggtaattattacattgaaatttgtgtcgtcaacttttcaaaagcataaaaaaagtgttactttcattttaaaatttcctttttttagtttcc 28988375  T
Q  234 ttaaccagtgc 244  Q
    |||||||||||    
T  28988374 ttaaccagtgc 28988364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 39753387 - 39753297
Alignment:
Q  148 agtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaac 238  Q
    ||||||||||||||||||||| ||||| |||||||||| ||||||||||  | || ||||||||||||||  |||| | ||||||||||||    
T  39753387 agtattacattgaaacttgtgctgtcaactcttcaaaagcataaaaagtattactttcattttaaaacttcattttcttagtttccttaac 39753297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 232
Target Start/End: Complemental strand, 36974154 - 36974059
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    |||||||||||| |||| ||||  |||||||||||||| |||||||||||||||||| ||| |  | ||||||||||| || ||||||| ||||||    
T  36974154 caaatgtagtaaatattgcattagaacttgtgttgtcaactcttcaaaaacataaaatgtgttattttcattttaaaatttccttttttaagtttc 36974059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 1179939 - 1180036
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtt 230  Q
    |||| |||| ||| ||||||||||||||||||| |||||||| ||  | |||||||||||||||| |  | | ||||||||| |||||||||| ||||    
T  1179939 gaattaaatatagaaagtattacattgaaacttatgttgtcaacttctaaaaaacataaaaagtgttatttttattttaaaattttcttttttaagtt 1180036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 6677076 - 6677137
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaa 194  Q
    |||||||||||||||||| ||| ||||||| ||||||| ||| |||||||||| ||||||||    
T  6677076 gaatcaaatgtagtaagttttatattgaaatttgtgttctcaactcttcaaaagcataaaaa 6677137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 14122896 - 14123003
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||| ||||||||||| ||| ||  ||  |||||| || ||||||| |||| |||||| | || |||||||||||||| ||| ||| |||||||||    
T  14122896 tcaaatgtggtaagtattaccttggaatatga-ttgtcaactattcaaaagcatataaagtgttactttcattttaaaacttccttcttttagtttcctt 14122994  T
Q  236 aaccagtgc 244  Q
    |||||||||    
T  14122995 aaccagtgc 14123003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 174
Target Start/End: Original strand, 24434108 - 24434149
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtca 174  Q
    ||||||||||||||||| ||| ||||||||||||||||||||    
T  24434108 gaatcaaatgtagtaagcattgcattgaaacttgtgttgtca 24434149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 193
Target Start/End: Complemental strand, 12384012 - 12383956
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaa 193  Q
    |||||||||||||||||  ||||||| ||||||||||| ||| |||||| |||||||    
T  12384012 caaatgtagtaagtattgaattgaaatttgtgttgtcaactcctcaaaagcataaaa 12383956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 21067576 - 21067620
Alignment:
Q  46 tgttaatcagtgcccccggacactggttaaggagtcaaatgtagt 90  Q
    |||||| ||||||| ||||| ||||||||||||||||||||||||    
T  21067576 tgttaaccagtgcctccggaaactggttaaggagtcaaatgtagt 21067620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 38282491 - 38282569
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaa 214  Q
    |||||| || ||| ||||||||| ||| ||||||||||| ||||| ||||| |||||||||| |  | |||||||||||    
T  38282491 tcaaatataataaatattacattaaaatttgtgttgtcaactctttaaaaatataaaaagtgttattttcattttaaaa 38282569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 208 - 265
Target Start/End: Original strand, 10032183 - 10032240
Alignment:
Q  208 tttaaaactttcttttttgagtttccttaaccagtgcaccggggataccggttaacat 265  Q
    ||||||||||||||||||  |||||||||||||||||  ||  || ||||||||||||    
T  10032183 tttaaaactttctttttttggtttccttaaccagtgcttcgaagacaccggttaacat 10032240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 5e-31; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 133 - 269
Target Start/End: Complemental strand, 19940684 - 19940549
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    ||||||||||||||||||||| ||||||||||| || ||||| ||| |||||| ||||||||||| |  | ||| |||||||||||| ||||| ||||||    
T  19940684 gaatcaaatgtagtaagtattgcattgaaacttatgctgtcaactcctcaaaagcataaaaagtgttattttcactttaaaactttccttttt-agtttc 19940586  T
Q  233 cttaaccagtgcaccggggataccggttaacatgacc 269  Q
    |||||||||||| ||||||  ||||||||||||||||    
T  19940585 cttaaccagtgccccgggggcaccggttaacatgacc 19940549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 138 - 247
Target Start/End: Original strand, 1408615 - 1408724
Alignment:
Q  138 aaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaa 237  Q
    ||||||||||| | |||||||| |||||||||||||| |||||||||||||||||||||  |  | |||||||||||||||||||||| |||||||||||    
T  1408615 aaatgtagtaatttttacattggaacttgtgttgtcaactcttcaaaaacataaaaagttttattttcattttaaaactttctttttttagtttccttaa 1408714  T
Q  238 ccagtgcacc 247  Q
    ||| ||||||    
T  1408715 ccaatgcacc 1408724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 136 - 269
Target Start/End: Complemental strand, 48611814 - 48611679
Alignment:
Q  136 tcaaatgtagta--agtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcc 233  Q
    ||||||||||||  |||| ||||||| |||||||||||| | || |||||||  |||||||||| | || | ||||||||||| |||||||| |||||||    
T  48611814 tcaaatgtagtataagtactacattgcaacttgtgttgttaacttttcaaaagtataaaaagtgttacttttattttaaaactatctttttttagtttcc 48611715  T
Q  234 ttaaccagtgcaccggggataccggttaacatgacc 269  Q
    ||||||||||| |||  || ||||||||||||||||    
T  48611714 ttaaccagtgccccgtagacaccggttaacatgacc 48611679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 46289887 - 46289778
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    ||||||| ||||||||||||| ||||| ||||| || ||||| | |||||||||||||||||||| |  | ||| ||||||||||| | |||| ||||||    
T  46289887 gaatcaagtgtagtaagtattgcattgtaacttttgctgtcaacacttcaaaaacataaaaagtgttattttcactttaaaacttt-tctttttagtttc 46289789  T
Q  233 cttaaccagtg 243  Q
     ||||||||||    
T  46289788 tttaaccagtg 46289778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 139 - 267
Target Start/End: Complemental strand, 4941274 - 4941149
Alignment:
Q  139 aatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaac 238  Q
    |||||||||| |||| |||||||||||||||||||| ||| |||||| ||||||||||| |  | | ||||||||| |||||||||| |  || |||||     
T  4941274 aatgtagtaattattgcattgaaacttgtgttgtcaactcctcaaaagcataaaaagtgttatttttattttaaaa-tttctttttttaagtttcttaat 4941176  T
Q  239 cagtgcaccggggataccggttaacatga 267  Q
    |||||| ||||||  ||||||||||||||    
T  4941175 cagtgc-ccgggg-caccggttaacatga 4941149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 243
Target Start/End: Original strand, 34663104 - 34663211
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||| |||||||||  |||| |||||||  ||||| || |||||||  |||||||||| | || |||||||||||||| ||||| | |||||||||    
T  34663104 tcaaatgtggtaagtattgtattggaacttgtactgtcaacttttcaaaagtataaaaagtgttactttcattttaaaacttacttttattagtttcctt 34663203  T
Q  236 aaccagtg 243  Q
    ||| ||||    
T  34663204 aacgagtg 34663211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 269
Target Start/End: Complemental strand, 6754195 - 6754063
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgct-gtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||||||| |||| ||||| ||||||||| |||| ||| |||||||||| ||||||| |  |  ||||||||||| |||| ||||| || ||||||    
T  6754195 caaatgtagtaaatattgcattggaacttgtgtcgtcaactcctcaaaaacattaaaagtgttattcttcattttaaaa-tttcattttttaggttcctt 6754097  T
Q  236 aaccagtgcaccggggataccggttaacatgacc 269  Q
    ||||||| | |||| |  | ||||||||||||||    
T  6754096 aaccagtaccccggaggcatcggttaacatgacc 6754063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 138 - 194
Target Start/End: Complemental strand, 42514323 - 42514267
Alignment:
Q  138 aaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaa 194  Q
    |||||||||||||||| ||| |||| ||||||||||| ||| |||||||||||||||    
T  42514323 aaatgtagtaagtattgcatagaaatttgtgttgtcaactcctcaaaaacataaaaa 42514267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 136 - 241
Target Start/End: Complemental strand, 32022697 - 32022592
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||| |||||||||||||||||| ||||  ||||| || || ||||  |||||||||  | || | ||||||||||||  |||||| ||||| |||    
T  32022697 tcaaatgtggtaagtattacattgaaaattgtactgtcaactttttaaaagtataaaaagtattacttttattttaaaacttcttttttttagttttctt 32022598  T
Q  236 aaccag 241  Q
    ||||||    
T  32022597 aaccag 32022592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 185
Target Start/End: Complemental strand, 16074092 - 16074040
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaa 185  Q
    |||||||||||||||| |||| |||||| | ||||||||||| ||||||||||    
T  16074092 gaatcaaatgtagtaaatattgcattgatatttgtgttgtcaactcttcaaaa 16074040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 17063854 - 17063957
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    ||||||||||||| ||||||| ||||||||  |||||||| | ||| | ||||||||||||| || |  | | | ||||||| |||||||||| ||||||    
T  17063854 gaatcaaatgtagaaagtattgcattgaaatgtgtgttgttaactcctaaaaaacataaaaattgttatttttactttaaaa-tttctttttttagtttc 17063952  T
Q  233 cttaa 237  Q
    |||||    
T  17063953 cttaa 17063957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 269
Target Start/End: Complemental strand, 45485121 - 45484990
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctta 236  Q
    ||||| ||||||||||| |||||||| ||||||||||| ||  | |||| ||||||| ||| |  | | ||||||||| ||  |||||| || |||||||    
T  45485121 caaatatagtaagtattgcattgaaatttgtgttgtcaacttctaaaaagcataaaatgtgttatttttattttaaaatttcttttttttaggttcctta 45485022  T
Q  237 accagtgcaccggggataccggttaacatgacc 269  Q
    |||||||| |||  |  ||||||||||||||||    
T  45485021 accagtgccccgaag-caccggttaacatgacc 45484990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 142 - 268
Target Start/End: Original strand, 43456656 - 43456782
Alignment:
Q  142 gtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaa-gtggtgctgtcattttaaaactttcttttttgagtttccttaacca 240  Q
    ||||||||||||||||||||| |||  ||||||  || ||||||||||||||| ||| |  | ||| |||| ||||||||||||| ||||| | |||| |    
T  43456656 gtagtaagtattacattgaaatttgcattgtcaattcctcaaaaacataaaaatgtgttattttcactttataactttctttttttagttttcctaacta 43456755  T
Q  241 gtgcaccggggataccggttaacatgac 268  Q
    |||  ||||||  || ||||||||||||    
T  43456756 gtgtcccgggg-cactggttaacatgac 43456782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 48768294 - 48768358
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtg 197  Q
    ||||||||| |||||  ||||| |||| |||||||||||||| ||||| ||||  ||||||||||    
T  48768294 gaatcaaatatagtagatattatattggaacttgtgttgtcaactctttaaaagtataaaaagtg 48768358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 40995907 - 40995796
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |  | |||||||||||||| ||||| | ||||||    
T  40995907 gaatcaaatgtagtaagtattacattgaaatttgtgttgtcaactcttcaaaaacataaaaagtgttattttcattttaaaacttccttttcttagtttc 40995808  T
Q  233 cttaaccagtgc 244  Q
     |||||| ||||    
T  40995807 attaaccggtgc 40995796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 138 - 269
Target Start/End: Complemental strand, 9799331 - 9799200
Alignment:
Q  138 aaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaa 237  Q
    |||||| ||||||||||||||| |||||||||||||| ||||| ||||  |||||||||| | |  | ||||||| ||||||  |||| |||||||||||    
T  9799331 aaatgtggtaagtattacattggaacttgtgttgtcaactcttgaaaagtataaaaagtgttacctttattttaagactttcaatttttagtttccttaa 9799232  T
Q  238 ccagtgcaccggggataccggttaacatgacc 269  Q
    |||||||  |||||  || |||||||||||||    
T  9799231 ccagtgccacgggggcactggttaacatgacc 9799200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 15111957 - 15111846
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    ||||||||| |||||||| ||| ||| ||||||||||||||| ||| | ||||| |||||||||| |  | ||||||||||| ||  |||||| ||||||    
T  15111957 gaatcaaatctagtaagttttatattaaaacttgtgttgtcaactcctaaaaaatataaaaagtgttattttcattttaaaatttcttttttttagtttc 15111858  T
Q  233 cttaaccagtgc 244  Q
    ||||||||||||    
T  15111857 cttaaccagtgc 15111846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 269
Target Start/End: Original strand, 6108559 - 6108689
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctta 236  Q
    |||||||||||| |||  ||||||||| |||||||| | ||| |||||||||||||||||  |  | ||||||||||| ||| |||||| || |||||||    
T  6108559 caaatgtagtaa-tatggcattgaaacatgtgttgttaactcctcaaaaacataaaaagtattattttcattttaaaattttattttttaag-ttcctta 6108656  T
Q  237 accagtgcaccggggataccggttaacatgacc 269  Q
    || ||||   |||||  ||| ||||||||||||    
T  6108657 acaagtgtctcgggggcaccagttaacatgacc 6108689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 150 - 243
Target Start/End: Complemental strand, 7222913 - 7222824
Alignment:
Q  150 tattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaaccagtg 243  Q
    ||||||||||||| ||||| |||   || ||||||||||||||||||| | || | ||||||||| |||||||||  |||||||||||| ||||    
T  7222913 tattacattgaaatttgtgctgta--ctattcaaaaacataaaaagtgttacttttattttaaaattttcttttt--agtttccttaactagtg 7222824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 274
Target Start/End: Original strand, 885759 - 885828
Alignment:
Q  204 tcattttaaaactttcttttttgagtttccttaaccagtgcaccggggataccggttaacatgaccatttt 274  Q
    ||||||||||| || ||||||| || ||||||||||| ||| ||| ||| |||||||||||||||| ||||    
T  885759 tcattttaaaatttcctttttt-aggttccttaaccactgccccgaggacaccggttaacatgaccctttt 885828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 117
Target Start/End: Original strand, 10292225 - 10292255
Alignment:
Q  87 tagttgattcttggatcgaataccgagtttt 117  Q
    |||||||||||||||||||||||||||||||    
T  10292225 tagttgattcttggatcgaataccgagtttt 10292255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 133 - 243
Target Start/End: Complemental strand, 27415341 - 27415232
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    ||||||||| ||| ||| ||||||||||||||| |||||||| ||  ||||||| || ||||||| |  | | | ||||||| |||| ||||| ||||||    
T  27415341 gaatcaaatataggaagcattacattgaaacttatgttgtcaacttctcaaaaatatcaaaagtgttatttttactttaaaa-tttccttttttagtttc 27415243  T
Q  233 cttaaccagtg 243  Q
    ||||| |||||    
T  27415242 cttaatcagtg 27415232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 173
Target Start/End: Complemental strand, 7302429 - 7302392
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtc 173  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  7302429 tcaaatgtagtaagtattatattggaacttgtgttgtc 7302392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 136 - 185
Target Start/End: Complemental strand, 7305042 - 7304993
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaa 185  Q
    |||||||||| || ||||| ||||||||||||||||||| ||| ||||||    
T  7305042 tcaaatgtagcaaatattatattgaaacttgtgttgtcaactcctcaaaa 7304993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 265
Target Start/End: Original strand, 6101 - 6230
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||||||||||||| ||||| || || || ||||| || ||||||||||||||||||| | || |||||||||||||||||||||| |||||||||    
T  6101 tcaaatgtagtaagtattgcattggaatttatgctgtcaacttttcaaaaacataaaaagtgttactttcattttaaaactttctttttttagtttcctt 6200  T
Q  236 aaccagtgcaccggggataccggttaacat 265  Q
    |||| |||| || || | ||||||||||||    
T  6201 aaccggtgcccctggaacaccggttaacat 6230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 66; Significance: 3e-29; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 136 - 269
Target Start/End: Original strand, 19328815 - 19328948
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||| ||||||||||||||| |||||||| | ||| ||||||||||  |||||||||| | || ||||||||||||||  |||||| |||||||||    
T  19328815 tcaaatgtggtaagtattacattggaacttgtgctatcaactcttcaaaagtataaaaagtgttactttcattttaaaacttcatttttttagtttcctt 19328914  T
Q  236 aaccagtgcaccggggataccggttaacatgacc 269  Q
    ||||||||| || |||  ||||||||||||||||    
T  19328915 aaccagtgcccccggggcaccggttaacatgacc 19328948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 133 - 225
Target Start/End: Original strand, 27756461 - 27756553
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttctttttt 225  Q
    |||||||||||||||||||||||||||||| ||||||||||| |||||||||| ||||||||||| |  | ||||||||||| ||||||||||    
T  27756461 gaatcaaatgtagtaagtattacattgaaatttgtgttgtcaactcttcaaaagcataaaaagtgttattttcattttaaaagtttctttttt 27756553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 137 - 269
Target Start/End: Original strand, 43159850 - 43159981
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctta 236  Q
    ||||||||||||||||| ||||| |||||||||||||| ||| |||||||| ||||||||| |  | ||||||||||| |||||||||| || ||| |||    
T  43159850 caaatgtagtaagtattgcattggaacttgtgttgtcaactcctcaaaaacttaaaaagtgttattttcattttaaaa-tttctttttttaggttcttta 43159948  T
Q  237 accagtgcaccggggataccggttaacatgacc 269  Q
    |||| ||| |||| || ||||||||||||||||    
T  43159949 accaatgccccggagacaccggttaacatgacc 43159981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 3427858 - 3427938
Alignment:
Q  134 aatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaa 214  Q
    ||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||| |  | |||||||||||    
T  3427858 aatcaaatgtagtaagtattgtattgaaacttgtgttgtcaactcttcaaaaacataaaaagtgttattttcattttaaaa 3427938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 2653017 - 2652915
Alignment:
Q  138 aaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaa 237  Q
    ||||||||||||||||  |||||||| |||||| ||| |||||||||||||||||||||     | ||||||||||| |||||||||| |||||||||||    
T  2653017 aaatgtagtaagtattctattgaaacatgtgttttcaactcttcaaaaacataaaaagtatcattttcattttaaaattttctttttttagtttccttaa 2652918  T
Q  238 cca 240  Q
    |||    
T  2652917 cca 2652915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 3913646 - 3913754
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||| ||||||||||| ||| |||||||||||| | ||||||||||  |||||||||| | || ||||||||||| || |||||| ||||||  ||    
T  3913646 tcaaatgtggtaagtattacgttggaacttgtgttgttaactcttcaaaagtataaaaagtgttactttcattttaaaaattcctttttagagttttttt 3913745  T
Q  236 aaccagtgc 244  Q
    |||||||||    
T  3913746 aaccagtgc 3913754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 20032911 - 20033017
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgct-gtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||| ||| |||||||||| ||||||| |||||| |||||||||||||||||||||| |  |  ||||||||||| |||||||||| || ||| ||    
T  20032911 caaatgtaataaatattacattggaacttgtattgtcaactcttcaaaaacataaaaagtgttattcttcattttaaaattttctttttt-aggttcttt 20033009  T
Q  236 aaccagtg 243  Q
    ||||||||    
T  20033010 aaccagtg 20033017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 156 - 269
Target Start/End: Complemental strand, 25474715 - 25474602
Alignment:
Q  156 attgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaaccagtgcaccggggatac 255  Q
    ||||||| ||||||||||| |||||||||| |||||||| || |  | ||||||||||| ||| || ||| |||||| |||||| |||   ||||   ||    
T  25474715 attgaaatttgtgttgtcaactcttcaaaagcataaaaaatgttattttcattttaaaattttattcttttagtttctttaaccggtgtgtcgggagcac 25474616  T
Q  256 cggttaacatgacc 269  Q
    ||||||||||||||    
T  25474615 cggttaacatgacc 25474602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 238
Target Start/End: Original strand, 46871288 - 46871393
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    ||||||||| ||  || ||||||||||||||||||||||||| ||| || |||| |||||||||| | || |||  |||||  ||||||||||   ||||    
T  46871288 gaatcaaatataaaaaatattacattgaaacttgtgttgtcaactcctcgaaaatataaaaagtgttactttcaccttaaagttttcttttttagttttc 46871387  T
Q  233 cttaac 238  Q
    ||||||    
T  46871388 cttaac 46871393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 243
Target Start/End: Original strand, 37193577 - 37193688
Alignment:
Q  133 gaatcaaatgtagtaagtattacattg-aaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagttt 231  Q
    |||||||||||||||| |||| ||||| ||||||| |  |||| ||| |||||  ||||||||||| |  | ||| |||||||||||||||||| || ||    
T  37193577 gaatcaaatgtagtaaatattgcattgaaaacttgagcggtcaactcctcaaatgcataaaaagtgttattttcactttaaaactttctttttttagatt 37193676  T
Q  232 ccttaaccagtg 243  Q
      ||||||||||    
T  37193677 ttttaaccagtg 37193688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 236
Target Start/End: Original strand, 38509919 - 38510021
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    |||||||||||| ||| |||| ||||| |||||||||||||| ||| ||||||  || ||||||| |  | | ||||||||| |||||||||| || |||    
T  38509919 gaatcaaatgtaataaatattgcattggaacttgtgttgtcaactcctcaaaagtatgaaaagtgttatttttattttaaaa-tttctttttttaggttc 38510017  T
Q  233 ctta 236  Q
    ||||    
T  38510018 ctta 38510021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 228 - 269
Target Start/End: Complemental strand, 46696121 - 46696080
Alignment:
Q  228 gtttccttaaccagtgcaccggggataccggttaacatgacc 269  Q
    ||||||||||| ||||| ||||||||||| ||||||||||||    
T  46696121 gtttccttaactagtgccccggggataccagttaacatgacc 46696080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 21858917 - 21858869
Alignment:
Q  146 taagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaa 194  Q
    |||||||| | | |||||||||||||||| ||| |||||||||||||||    
T  21858917 taagtattgcctagaaacttgtgttgtcaactcctcaaaaacataaaaa 21858869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 146 - 194
Target Start/End: Complemental strand, 21914780 - 21914732
Alignment:
Q  146 taagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaa 194  Q
    |||||||| | | |||||||||||||||| ||| |||||||||||||||    
T  21914780 taagtattgcctagaaacttgtgttgtcaactcctcaaaaacataaaaa 21914732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 3e-23; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 137 - 276
Target Start/End: Original strand, 36563054 - 36563192
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctta 236  Q
    |||||||||||||||||  |||| |||||||| ||||| ||| |||||| ||||||||||| |  | ||| |||||||||||| ||||| |||||| |||    
T  36563054 caaatgtagtaagtattgtattgtaacttgtgatgtcaactcctcaaaagcataaaaagtgttattttcactttaaaactttccttttt-agtttcttta 36563152  T
Q  237 accagtgcaccggggataccggttaacatgaccatttttt 276  Q
    |||||||| ||||||  ||||||||||| |||| ||||||    
T  36563153 accagtgccccgggggcaccggttaacaagaccctttttt 36563192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 138 - 244
Target Start/End: Complemental strand, 8936161 - 8936055
Alignment:
Q  138 aaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaa 237  Q
    |||||| | |||||||||||||||||||||| ||||| | ||| |||| ||||||||||| | || | |||||||||||| ||||||| |||||||||||    
T  8936161 aaatgtggcaagtattacattgaaacttgtgctgtcaacccttgaaaagcataaaaagtgttacttttattttaaaacttccttttttaagtttccttaa 8936062  T
Q  238 ccagtgc 244  Q
    |||||||    
T  8936061 ccagtgc 8936055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 137 - 276
Target Start/End: Complemental strand, 36545260 - 36545122
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctta 236  Q
    |||||||||||||||||  |||| |||||||| ||||| ||| |||||| ||||||||||| |  | ||| ||||||| |||| ||||| |||||| |||    
T  36545260 caaatgtagtaagtattgtattgtaacttgtgatgtcaactcctcaaaagcataaaaagtgttattttcactttaaaattttccttttt-agtttcttta 36545162  T
Q  237 accagtgcaccggggataccggttaacatgaccatttttt 276  Q
    |||||||| ||||||  ||||||||||| |||| ||||||    
T  36545161 accagtgccccgggggcaccggttaacaagaccctttttt 36545122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 136 - 217
Target Start/End: Complemental strand, 1294989 - 1294908
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactt 217  Q
    ||||||||| ||||||||||||||||| ||||| ||||| ||||||| ||||||||||| || | || ||||||||||||||    
T  1294989 tcaaatgtaataagtattacattgaaatttgtgctgtcagctcttcataaacataaaaaatgttactttcattttaaaactt 1294908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 238
Target Start/End: Original strand, 42388734 - 42388836
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    ||||||||||||||||||  |||| || ||||| ||||| || ||||||||||||||||||| |  | |||| |||||||||  |||||| ||||| |||    
T  42388734 tcaaatgtagtaagtattgtattggaatttgtgctgtcaacttttcaaaaacataaaaagtgttattttcatcttaaaacttcttttttttagttttctt 42388833  T
Q  236 aac 238  Q
    |||    
T  42388834 aac 42388836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 239
Target Start/End: Original strand, 42411032 - 42411133
Alignment:
Q  138 aaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaa 237  Q
    |||||||||||||||| ||||| |||||| |||||||  | |||||||||||||||| || |  | | || ||||||||| |||||||  ||||||||||    
T  42411032 aaatgtagtaagtattgcattggaacttgcgttgtcaagttttcaaaaacataaaaaatgttatttttatcttaaaacttacttttttcggtttccttaa 42411131  T
Q  238 cc 239  Q
    ||    
T  42411132 cc 42411133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 270
Target Start/End: Original strand, 43178596 - 43178730
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    ||||||||| ||| ||||||||||||| ||||  ||||| || || ||||  ||||||| || | || | |||||||||||| ||||||| | |||| ||    
T  43178596 tcaaatgtaataaatattacattgaaatttgtactgtcaacttttgaaaagtataaaaaatgttacttttattttaaaacttcctttttttaatttcttt 43178695  T
Q  236 aaccagtgcaccggggataccggttaacatgacca 270  Q
    ||| ||||| |  |||| || ||||||||||||||    
T  43178696 aactagtgccctagggacacgggttaacatgacca 43178730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 194
Target Start/End: Original strand, 50175347 - 50175408
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaa 194  Q
    ||||||||| ||| ||||||| ||||| || ||||||||||| ||| | |||||||||||||    
T  50175347 gaatcaaatatagaaagtattgcattggaatttgtgttgtcaactcctaaaaaacataaaaa 50175408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 5e-22; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 133 - 274
Target Start/End: Complemental strand, 37720639 - 37720499
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    ||||||||||||||||||||| ||||| ||| |||| ||||| ||| |||||| ||||||||||| |  | ||| |||||||||||| ||||| ||||||    
T  37720639 gaatcaaatgtagtaagtattgcattggaacatgtgctgtcaactcctcaaaagcataaaaagtgttattttcactttaaaactttccttttt-agtttc 37720541  T
Q  233 cttaaccagtgcaccggggataccggttaacatgaccatttt 274  Q
    |||||||||||| | ||||  | ||||||||| |||| ||||    
T  37720540 cttaaccagtgccctgggggcatcggttaacaagaccctttt 37720499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 269
Target Start/End: Complemental strand, 28710476 - 28710341
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    ||||||||||||||||||||||||||| || ||||| ||  | ||| ||||||||||||||| || |  | ||| |||||||||||||||||| ||||||    
T  28710476 gaatcaaatgtagtaagtattacattggaatttgtgctgctaactcctcaaaaacataaaaattgttattttcactttaaaactttctttttt-agtttc 28710378  T
Q  233 cttaaccagtgcaccggggataccggttaacatgacc 269  Q
     ||||||| ||  ||| ||| ||||||||||||||||    
T  28710377 tttaaccaatgtcccgaggacaccggttaacatgacc 28710341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 239
Target Start/End: Complemental strand, 42469030 - 42468925
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    |||||||||||||||||||||| ||||||||||||| ||||  ||||| || ||||||||||||| || | ||||||||||| || | ||||| ||||||    
T  42469030 gaatcaaatgtagtaagtattaaattgaaacttgtgatgtccactctttaataacataaaaagtgttgttttcattttaaaatttaccttttt-agtttc 42468932  T
Q  233 cttaacc 239  Q
    |||||||    
T  42468931 cttaacc 42468925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 15972220 - 15972157
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagt 196  Q
    ||||||||||||  ||||||||||||||||||||||||||||  || ||||||| |||||||||    
T  15972220 gaatcaaatgtataaagtattacattgaaacttgtgttgtcaaatcctcaaaaatataaaaagt 15972157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 239
Target Start/End: Complemental strand, 30487033 - 30486930
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||| ||||||||| |||||||| |||||  |||| || || ||||| ||||||| || | || | |||||||||||| ||||||| |||||||||    
T  30487033 tcaaatgtcgtaagtattgcattgaaatttgtgccgtcaacttttaaaaaatataaaaaatgttacttttattttaaaacttcctttttttagtttcctt 30486934  T
Q  236 aacc 239  Q
    ||||    
T  30486933 aacc 30486930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 135 - 192
Target Start/End: Complemental strand, 47903968 - 47903911
Alignment:
Q  135 atcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaa 192  Q
    |||||||||| |||||||||||||| || ||||||||||| ||| |||||||||||||    
T  47903968 atcaaatgtaataagtattacattggaatttgtgttgtcaactcctcaaaaacataaa 47903911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 268
Target Start/End: Complemental strand, 7883062 - 7883003
Alignment:
Q  208 tttaaaactttcttttttgagtttccttaaccagtgcaccggggataccggttaacatgac 268  Q
    |||||||||||||||||| || ||||||||||||||| |  |||  |||||||||||||||    
T  7883062 tttaaaactttctttttt-agcttccttaaccagtgctcttggggcaccggttaacatgac 7883003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 269
Target Start/End: Original strand, 1280 - 1412
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctta 236  Q
    ||||||||||||||||| |||||  ||||||||||||| ||| |||||| |||||||| || |  | ||||||||||| |||||||||| || |||||||    
T  1280 caaatgtagtaagtattgcattggtacttgtgttgtcaactcatcaaaagcataaaaaatgttattttcattttaaaaatttctttttttaggttcctta 1379  T
Q  237 accagtgcaccggggataccggttaacatgacc 269  Q
     || |||| || |||  ||||||||||||||||    
T  1380 gcccgtgccccaggggcaccggttaacatgacc 1412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 45; Significance: 1e-16; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 249
Target Start/End: Complemental strand, 4614360 - 4614249
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctta 236  Q
    ||||||||||||||||||||||  || || |||||||| ||| |||||||||| ||||||| |  | | ||||||||| |||||||||| || |||||||    
T  4614360 caaatgtagtaagtattacattagaatttatgttgtcaactcatcaaaaacatgaaaagtgctatttttattttaaaa-tttctttttttaggttcctta 4614262  T
Q  237 accagtgcaccgg 249  Q
    |||||||| ||||    
T  4614261 accagtgctccgg 4614249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 25627396 - 25627456
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtg 197  Q
    |||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||||    
T  25627396 caaatgtagtaagtattttattgaaacttgtgttgtcaactcctcaaaaacataaaaagtg 25627456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 136 - 244
Target Start/End: Original strand, 27322743 - 27322851
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||| ||||||||| ||||| |||||||| ||||| ||||| |||| ||||||||||  | || | |||||  ||||| ||||||| |||||||||    
T  27322743 tcaaatgtggtaagtattgcattggaacttgtgctgtcaactcttgaaaagcataaaaagtattacttttattttcgaacttcctttttttagtttcctt 27322842  T
Q  236 aaccagtgc 244  Q
    |||||||||    
T  27322843 aaccagtgc 27322851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 269
Target Start/End: Complemental strand, 9521147 - 9521013
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttc-ttttttgagtttcct 234  Q
    ||||||||  ||||||||||||||||||||||| ||||| || || ||||  |||||||||| | || | |||||||||||||| |||||| ||||| ||    
T  9521147 tcaaatgtgataagtattacattgaaacttgtgctgtcaacttttgaaaagtataaaaagtgttacttttattttaaaactttcatttttttagttttct 9521048  T
Q  235 taaccagtgcaccggggataccggttaacatgacc 269  Q
    |||||| ||| || |    ||||||||||||||||    
T  9521047 taaccaatgctcctgaagcaccggttaacatgacc 9521013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 267
Target Start/End: Original strand, 16634422 - 16634544
Alignment:
Q  145 gtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaaccagtgc 244  Q
    ||||||||||||||| || ||||| ||||| || ||||||| |||||||| || ||||   ||||||||||||  |||| | ||||||||||| ||||||    
T  16634422 gtaagtattacattggaatttgtgctgtcaacttttcaaaagcataaaaaatgttgcttctattttaaaacttcattttattagtttccttaatcagtgc 16634521  T
Q  245 accggggataccggttaacatga 267  Q
     |||| |  ||||||||||||||    
T  16634522 tccggaggcaccggttaacatga 16634544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 133 - 244
Target Start/End: Complemental strand, 6983265 - 6983156
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    ||||||||| ||| ||||||||||||| |||||||| ||||| ||| | |||| ||||||||||| |  | ||| ||||||  |||| ||||| ||||||    
T  6983265 gaatcaaatatagaaagtattacattggaacttgtggtgtcaactcctaaaaagcataaaaagtgttattttcactttaaa--tttccttttttagtttc 6983168  T
Q  233 cttaaccagtgc 244  Q
    ||||||||||||    
T  6983167 cttaaccagtgc 6983156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 194
Target Start/End: Complemental strand, 1991991 - 1991934
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaa 194  Q
    ||||| ||||||||||||||||  |||||||||||||| ||| |||||||||||||||    
T  1991991 caaatatagtaagtattacattagaacttgtgttgtcaactcctcaaaaacataaaaa 1991934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 3037404 - 3037504
Alignment:
Q  133 gaatcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttc 232  Q
    |||||||| |||| || |||||||||| || ||||||||||| ||| | ||||  |||||||||| | || | ||||||||| |||||||||| ||||||    
T  3037404 gaatcaaacgtagaaattattacattggaatttgtgttgtcaactccttaaaagtataaaaagtgttactttgattttaaaattttctttttt-agtttc 3037502  T
Q  233 ct 234  Q
    ||    
T  3037503 ct 3037504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 136 - 244
Target Start/End: Complemental strand, 9116486 - 9116378
Alignment:
Q  136 tcaaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtggtgctgtcattttaaaactttcttttttgagtttcctt 235  Q
    |||||||| |||| |||| ||||| |||||||| ||||| || || ||||  ||| |||||| | || | ||||||||||||  |||||| ||||| |||    
T  9116486 tcaaatgtggtaaatattgcattggaacttgtgctgtcaacttttgaaaagtatacaaagtgttacttttattttaaaacttcatttttttagttttctt 9116387  T
Q  236 aaccagtgc 244  Q
    |||||||||    
T  9116386 aaccagtgc 9116378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 208 - 264
Target Start/End: Complemental strand, 6709963 - 6709907
Alignment:
Q  208 tttaaaactttcttttttgagtttccttaaccagtgcaccggggataccggttaaca 264  Q
    ||||||| ||||||||||  | ||||||||||||||| |||| || |||||||||||    
T  6709963 tttaaaattttctttttttggattccttaaccagtgccccggagacaccggttaaca 6709907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 14224 - 14284
Alignment:
Q  137 caaatgtagtaagtattacattgaaacttgtgttgtcatctcttcaaaaacataaaaagtg 197  Q
    |||||||||||| |||| ||||  |||||||||||||| ||| |||||| |||||||||||    
T  14224 caaatgtagtaaatattgcattagaacttgtgttgtcaactcctcaaaagcataaaaagtg 14284  T

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Target: scaffold0009 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 187 - 243
Target Start/End: Complemental strand, 106522 - 106467
Alignment:
Q  187 cataaaaagtggtgctgtcattttaaaactttcttttttgagtttccttaaccagtg 243  Q
    ||||||||||| |  | ||| |||||||||||||||||| |||||||||||||||||    
T  106522 cataaaaagtgttattttcactttaaaactttctttttt-agtttccttaaccagtg 106467  T

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