View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6698_low_62 (Length: 297)
Name: NF6698_low_62
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6698_low_62 |
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Alignment Details
Target: chr3 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 8 - 279
Target Start/End: Original strand, 12760460 - 12760732
Alignment:
| Q |
8 |
tattcccataatgtattttggaaaatattttatctagacctacatactcaatcgatcacaaaagtgatataatagatataatatgatgttgatttgacat |
107 |
Q |
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| T |
12760460 |
tattcccataatgtattttgcaaaatattttatctaaacctacatactcaatcgatcacaaaagtgatataatagatataatatgttgttgatttgacag |
12760559 |
T |
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| Q |
108 |
aaatacaaaagtgttaattacgtattagaatataaatatttgagatgtttaaatat-agagtcgacaatgatttccctttacgtgaaacatttcaactat |
206 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12760560 |
aaatacaaaagtgttaattacttattagaatataaatatttgagatgtttaaatataagagtcgacaatgatttccctttacgtgaaacatttcaactat |
12760659 |
T |
|
| Q |
207 |
aaaatcccctcaattcaccaacacattccttaccaatacaaacatctttcattcttacctatcccctcatttc |
279 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
12760660 |
aaaatcccctcaattcaccaacacattccttaccaatacaaacatctttcattcttaactatcccctcatttc |
12760732 |
T |
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