View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6698_low_69 (Length: 261)
Name: NF6698_low_69
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6698_low_69 |
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Alignment Details
Target: chr1 (Bit Score: 242; Significance: 1e-134; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 7665365 - 7665618
Alignment:
| Q |
1 |
tggtgtgggggtggtgttgagtcaagggggtcaccctataacattcttttctataaagatggtacctagaatgcaactccagtctacttatattagatag |
100 |
Q |
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| T |
7665365 |
tggtgtgggggtggtgttgagtcaagggggtcaccctataacattcttttctataaagatggtacctagaatgcaactccagtctgcttatattagatag |
7665464 |
T |
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| Q |
101 |
ttctatgctataactgtagccttagcaaaatttcgccactatttgctaggccacaaatttataataagaacggatcagaagagtttaaaaagcctgttgg |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7665465 |
ttctatgctataactgcagccttagcaaaatttcgccactatttgctaggccacaaatttataataagaacggatcagaagagtttaaaaagcctgttgg |
7665564 |
T |
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| Q |
201 |
atcaatccttataaactccaaagcaacaagcttggttgcataagttaattggtt |
254 |
Q |
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| T |
7665565 |
atcaatccttataaactccaaagcaacaagcttggttgcataagttcattggtt |
7665618 |
T |
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