View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6698_low_85 (Length: 241)

Name: NF6698_low_85
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6698_low_85
NF6698_low_85
[»] chr4 (48 HSPs)
chr4 (1-104)||(6162885-6162988)
chr4 (120-220)||(23553638-23553738)
chr4 (120-224)||(41415567-41415671)
chr4 (120-220)||(7349756-7349856)
chr4 (120-218)||(23051392-23051490)
chr4 (120-220)||(35999957-36000050)
chr4 (122-224)||(53961386-53961488)
chr4 (120-220)||(4329662-4329762)
chr4 (120-220)||(29190826-29190926)
chr4 (124-224)||(48910816-48910916)
chr4 (121-220)||(10389279-10389378)
chr4 (120-205)||(16667394-16667479)
chr4 (120-205)||(54495647-54495732)
chr4 (120-220)||(10813504-10813605)
chr4 (120-188)||(49228754-49228822)
chr4 (120-199)||(47326902-47326981)
chr4 (120-199)||(47341698-47341777)
chr4 (120-205)||(27362474-27362559)
chr4 (123-199)||(36971363-36971439)
chr4 (120-196)||(49250345-49250421)
chr4 (120-153)||(18882277-18882310)
chr4 (120-153)||(24684972-24685005)
chr4 (120-205)||(49181155-49181240)
chr4 (120-164)||(9759152-9759196)
chr4 (120-164)||(17409948-17409992)
chr4 (121-153)||(19450911-19450943)
chr4 (121-153)||(19468329-19468361)
chr4 (120-164)||(39876954-39876998)
chr4 (120-196)||(41887579-41887655)
chr4 (120-151)||(4779446-4779477)
chr4 (122-169)||(8736823-8736870)
chr4 (121-164)||(23438279-23438322)
chr4 (121-160)||(40049686-40049725)
chr4 (120-153)||(3085805-3085838)
chr4 (120-165)||(10658427-10658472)
chr4 (120-165)||(10872572-10872617)
chr4 (120-153)||(23545611-23545644)
chr4 (123-164)||(25843418-25843459)
chr4 (120-153)||(52391433-52391466)
chr4 (120-153)||(53376418-53376451)
chr4 (121-149)||(13214427-13214455)
chr4 (120-160)||(32279199-32279239)
chr4 (120-196)||(32459422-32459498)
chr4 (120-160)||(34941406-34941446)
chr4 (128-164)||(40682556-40682592)
chr4 (120-152)||(42479902-42479934)
chr4 (124-160)||(50352430-50352466)
chr4 (120-164)||(51691465-51691509)
[»] chr7 (46 HSPs)
chr7 (120-224)||(3561888-3561992)
chr7 (120-224)||(39757120-39757224)
chr7 (124-224)||(384444-384544)
chr7 (120-224)||(9332025-9332129)
chr7 (120-220)||(5909292-5909392)
chr7 (120-220)||(19889408-19889508)
chr7 (120-224)||(18102240-18102345)
chr7 (120-220)||(36548470-36548570)
chr7 (120-216)||(8170593-8170689)
chr7 (120-224)||(12085941-12086045)
chr7 (120-189)||(22334031-22334100)
chr7 (120-196)||(23982765-23982841)
chr7 (144-220)||(47120228-47120304)
chr7 (120-199)||(7170091-7170170)
chr7 (120-199)||(41331466-41331545)
chr7 (120-225)||(24462965-24463071)
chr7 (120-188)||(8594998-8595065)
chr7 (120-205)||(5833438-5833523)
chr7 (120-184)||(24250602-24250666)
chr7 (120-164)||(25709409-25709453)
chr7 (120-169)||(47457471-47457520)
chr7 (120-156)||(7040262-7040298)
chr7 (120-164)||(8091322-8091366)
chr7 (120-164)||(33343112-33343156)
chr7 (120-164)||(34270385-34270429)
chr7 (120-164)||(46290134-46290178)
chr7 (120-195)||(32117907-32117982)
chr7 (120-219)||(6587853-6587954)
chr7 (120-178)||(26300681-26300739)
chr7 (120-153)||(820551-820584)
chr7 (120-153)||(4969908-4969941)
chr7 (124-169)||(42750402-42750447)
chr7 (120-196)||(7899496-7899572)
chr7 (120-164)||(33072105-33072149)
chr7 (126-196)||(12624729-12624798)
chr7 (120-153)||(26037228-26037261)
chr7 (120-153)||(26050471-26050504)
chr7 (120-153)||(26059830-26059863)
chr7 (120-153)||(29398144-29398177)
chr7 (120-153)||(29692550-29692583)
chr7 (120-153)||(44473522-44473555)
chr7 (120-153)||(45501594-45501627)
chr7 (120-196)||(38798080-38798156)
chr7 (120-196)||(38798218-38798294)
chr7 (120-196)||(42593404-42593480)
chr7 (120-196)||(45645459-45645535)
[»] chr2 (46 HSPs)
chr2 (120-220)||(16126569-16126669)
chr2 (120-220)||(12016734-12016834)
chr2 (120-220)||(16919164-16919264)
chr2 (120-220)||(19228493-19228593)
chr2 (125-224)||(13351226-13351325)
chr2 (120-220)||(27665054-27665154)
chr2 (121-220)||(4821344-4821443)
chr2 (121-220)||(22705522-22705621)
chr2 (120-220)||(8770896-8770996)
chr2 (120-220)||(14377492-14377592)
chr2 (121-224)||(2060053-2060157)
chr2 (120-220)||(26229864-26229964)
chr2 (136-224)||(39904074-39904162)
chr2 (121-205)||(15231914-15231998)
chr2 (120-219)||(16123347-16123446)
chr2 (120-205)||(15411632-15411717)
chr2 (127-220)||(37471757-37471851)
chr2 (127-197)||(41492150-41492220)
chr2 (155-220)||(10690850-10690915)
chr2 (120-199)||(12919360-12919439)
chr2 (120-205)||(9747400-9747485)
chr2 (120-205)||(45062281-45062366)
chr2 (120-164)||(24729587-24729631)
chr2 (120-196)||(35729209-35729285)
chr2 (120-154)||(6109523-6109557)
chr2 (120-153)||(8065258-8065291)
chr2 (120-153)||(26003356-26003389)
chr2 (120-165)||(38248430-38248475)
chr2 (120-196)||(3951342-3951418)
chr2 (120-164)||(5583568-5583612)
chr2 (120-164)||(7757796-7757840)
chr2 (120-196)||(8847879-8847955)
chr2 (120-156)||(20566027-20566063)
chr2 (120-164)||(29157839-29157883)
chr2 (120-151)||(5853473-5853504)
chr2 (120-159)||(9450386-9450425)
chr2 (120-151)||(16493542-16493573)
chr2 (122-160)||(34213961-34213999)
chr2 (120-205)||(6765083-6765168)
chr2 (120-149)||(11660904-11660933)
chr2 (120-149)||(43388491-43388520)
chr2 (120-205)||(43941864-43941949)
chr2 (120-196)||(3286587-3286663)
chr2 (122-150)||(15749212-15749240)
chr2 (120-164)||(17265528-17265572)
chr2 (120-160)||(23932693-23932733)
[»] chr1 (51 HSPs)
chr1 (120-220)||(313817-313917)
chr1 (120-220)||(6569995-6570095)
chr1 (120-220)||(30288874-30288974)
chr1 (120-224)||(44918088-44918192)
chr1 (120-220)||(39150337-39150437)
chr1 (122-224)||(8062268-8062370)
chr1 (120-220)||(17919521-17919621)
chr1 (121-216)||(39930812-39930907)
chr1 (120-195)||(10896446-10896521)
chr1 (129-219)||(52833491-52833581)
chr1 (121-199)||(3096298-3096376)
chr1 (120-205)||(30171962-30172047)
chr1 (120-205)||(30187503-30187588)
chr1 (127-188)||(44007547-44007608)
chr1 (120-199)||(6754560-6754639)
chr1 (120-199)||(41624918-41624997)
chr1 (129-198)||(31100952-31101021)
chr1 (142-219)||(32716195-32716272)
chr1 (120-205)||(35438798-35438883)
chr1 (120-195)||(12947564-12947639)
chr1 (120-199)||(30363005-30363084)
chr1 (120-217)||(9516651-9516749)
chr1 (124-205)||(5057085-5057166)
chr1 (135-188)||(21391924-21391977)
chr1 (120-164)||(1502730-1502774)
chr1 (120-156)||(6307634-6307670)
chr1 (120-164)||(23576424-23576468)
chr1 (120-164)||(36490903-36490947)
chr1 (120-167)||(5875225-5875272)
chr1 (132-207)||(21854139-21854214)
chr1 (120-153)||(6180321-6180354)
chr1 (127-196)||(24669019-24669088)
chr1 (120-153)||(34802102-34802135)
chr1 (120-153)||(35512860-35512893)
chr1 (120-196)||(4249298-4249374)
chr1 (120-196)||(4249622-4249698)
chr1 (120-196)||(4249946-4250022)
chr1 (120-164)||(22167459-22167503)
chr1 (120-160)||(25465286-25465326)
chr1 (127-178)||(19348860-19348911)
chr1 (120-226)||(38812801-38812908)
chr1 (120-180)||(2222246-2222304)
chr1 (120-153)||(13322011-13322044)
chr1 (120-153)||(39310796-39310829)
chr1 (120-153)||(51382449-51382482)
chr1 (120-220)||(51920441-51920542)
chr1 (121-153)||(28016315-28016347)
chr1 (121-153)||(32201759-32201791)
chr1 (120-188)||(41676570-41676638)
chr1 (120-196)||(42589264-42589340)
chr1 (120-196)||(44013017-44013093)
[»] chr3 (43 HSPs)
chr3 (122-220)||(16875037-16875135)
chr3 (120-224)||(3863393-3863497)
chr3 (120-222)||(29686386-29686488)
chr3 (120-220)||(11610982-11611082)
chr3 (130-220)||(50364258-50364348)
chr3 (120-219)||(20938125-20938225)
chr3 (120-225)||(40497109-40497215)
chr3 (120-224)||(32553430-32553534)
chr3 (120-224)||(13495357-13495462)
chr3 (120-216)||(24978718-24978814)
chr3 (120-205)||(38389530-38389615)
chr3 (120-204)||(23523030-23523114)
chr3 (129-219)||(38786343-38786433)
chr3 (130-220)||(54621239-54621328)
chr3 (120-169)||(11611095-11611144)
chr3 (120-187)||(41151734-41151801)
chr3 (120-205)||(36426419-36426504)
chr3 (127-164)||(36812382-36812419)
chr3 (120-164)||(2571392-2571436)
chr3 (120-196)||(49396472-49396548)
chr3 (120-153)||(8165781-8165814)
chr3 (120-165)||(35414819-35414864)
chr3 (120-153)||(40930186-40930219)
chr3 (120-153)||(50204538-50204571)
chr3 (175-220)||(51339249-51339294)
chr3 (120-160)||(10307894-10307934)
chr3 (120-196)||(23638059-23638135)
chr3 (120-164)||(46492353-46492397)
chr3 (120-164)||(51618171-51618215)
chr3 (120-151)||(33474483-33474514)
chr3 (124-195)||(39364884-39364955)
chr3 (120-178)||(45983616-45983674)
chr3 (124-153)||(23803060-23803089)
chr3 (121-178)||(27549654-27549711)
chr3 (120-153)||(42180187-42180220)
chr3 (120-164)||(12515484-12515528)
chr3 (120-196)||(29932362-29932438)
chr3 (120-196)||(29981516-29981592)
chr3 (120-152)||(31318777-31318809)
chr3 (120-160)||(37055376-37055416)
chr3 (121-153)||(38277468-38277500)
chr3 (121-153)||(51401575-51401607)
chr3 (121-153)||(54527717-54527749)
[»] chr8 (57 HSPs)
chr8 (120-220)||(10129171-10129271)
chr8 (120-224)||(9801732-9801836)
chr8 (120-220)||(13327951-13328051)
chr8 (120-220)||(7140469-7140569)
chr8 (120-220)||(18567426-18567526)
chr8 (120-220)||(39701813-39701913)
chr8 (124-220)||(40210835-40210931)
chr8 (126-206)||(45519578-45519658)
chr8 (120-220)||(19343846-19343947)
chr8 (120-216)||(1203673-1203769)
chr8 (128-220)||(8140635-8140727)
chr8 (120-225)||(26682130-26682236)
chr8 (127-188)||(31451424-31451485)
chr8 (136-220)||(9743929-9744013)
chr8 (120-199)||(14816136-14816214)
chr8 (120-199)||(14829526-14829604)
chr8 (120-199)||(35678285-35678363)
chr8 (120-225)||(44091380-44091486)
chr8 (120-179)||(4080404-4080463)
chr8 (120-199)||(39024867-39024946)
chr8 (120-177)||(45518063-45518120)
chr8 (120-176)||(4084553-4084609)
chr8 (120-176)||(4102860-4102916)
chr8 (120-195)||(8284578-8284653)
chr8 (120-178)||(22838335-22838393)
chr8 (120-205)||(31812196-31812281)
chr8 (120-164)||(2161511-2161555)
chr8 (120-164)||(3306065-3306109)
chr8 (129-169)||(34405085-34405125)
chr8 (120-164)||(36967080-36967124)
chr8 (120-158)||(13496719-13496757)
chr8 (129-199)||(35740948-35741018)
chr8 (120-178)||(38212954-38213012)
chr8 (120-165)||(12189598-12189643)
chr8 (120-165)||(12434026-12434071)
chr8 (120-153)||(27874691-27874724)
chr8 (120-153)||(28014868-28014901)
chr8 (141-214)||(38527898-38527971)
chr8 (120-160)||(6818145-6818185)
chr8 (120-160)||(14961673-14961713)
chr8 (120-164)||(26364000-26364044)
chr8 (125-164)||(297219-297258)
chr8 (120-151)||(40225997-40226028)
chr8 (120-217)||(7393255-7393352)
chr8 (129-219)||(39430555-39430645)
chr8 (120-153)||(5573421-5573454)
chr8 (120-153)||(9580119-9580152)
chr8 (120-205)||(26834644-26834729)
chr8 (120-196)||(42204-42280)
chr8 (120-196)||(10543639-10543715)
chr8 (124-160)||(12132111-12132147)
chr8 (121-153)||(14391588-14391620)
chr8 (120-164)||(15198910-15198954)
chr8 (121-153)||(16445747-16445779)
chr8 (124-160)||(32089480-32089516)
chr8 (120-180)||(42781582-42781642)
chr8 (125-153)||(45006104-45006132)
[»] chr5 (30 HSPs)
chr5 (120-220)||(4047480-4047580)
chr5 (120-224)||(34578075-34578179)
chr5 (120-220)||(2795591-2795691)
chr5 (128-220)||(30328345-30328437)
chr5 (120-214)||(14466504-14466598)
chr5 (120-224)||(41350266-41350370)
chr5 (120-220)||(31365960-31366060)
chr5 (127-219)||(15190941-15191034)
chr5 (123-220)||(28629946-28630043)
chr5 (132-216)||(9184279-9184363)
chr5 (121-220)||(12642004-12642103)
chr5 (120-224)||(11376023-11376128)
chr5 (120-176)||(30893741-30893797)
chr5 (120-199)||(8103590-8103669)
chr5 (120-179)||(11636840-11636899)
chr5 (120-164)||(30839905-30839949)
chr5 (120-164)||(36597703-36597747)
chr5 (132-207)||(24329657-24329732)
chr5 (120-153)||(3398355-3398388)
chr5 (120-165)||(6863679-6863724)
chr5 (121-178)||(23995427-23995484)
chr5 (120-205)||(24014698-24014783)
chr5 (124-179)||(16174636-16174691)
chr5 (120-195)||(32019994-32020069)
chr5 (120-165)||(35151342-35151387)
chr5 (120-196)||(12332429-12332505)
chr5 (120-196)||(31613159-31613235)
chr5 (120-196)||(31705021-31705097)
chr5 (120-196)||(40454153-40454229)
chr5 (120-164)||(40513075-40513119)
[»] scaffold0727 (1 HSPs)
scaffold0727 (120-220)||(5759-5859)
[»] scaffold0061 (1 HSPs)
scaffold0061 (120-220)||(52789-52889)
[»] scaffold0017 (1 HSPs)
scaffold0017 (120-220)||(145745-145845)
[»] scaffold0011 (1 HSPs)
scaffold0011 (120-220)||(13153-13253)
[»] chr6 (33 HSPs)
chr6 (120-220)||(2830691-2830791)
chr6 (120-220)||(31069592-31069692)
chr6 (120-224)||(31568173-31568277)
chr6 (140-224)||(22974603-22974687)
chr6 (140-224)||(23813714-23813798)
chr6 (142-220)||(5362925-5363003)
chr6 (120-220)||(1017788-1017889)
chr6 (120-205)||(10887112-10887197)
chr6 (120-199)||(31169773-31169852)
chr6 (121-196)||(31503834-31503909)
chr6 (120-169)||(3853062-3853111)
chr6 (120-205)||(6016939-6017024)
chr6 (120-199)||(17596430-17596509)
chr6 (120-164)||(14228136-14228180)
chr6 (120-164)||(28943779-28943823)
chr6 (120-160)||(29863312-29863352)
chr6 (120-153)||(20979107-20979140)
chr6 (120-205)||(27819637-27819722)
chr6 (120-153)||(34692489-34692522)
chr6 (120-160)||(17552597-17552637)
chr6 (120-164)||(23936386-23936430)
chr6 (120-156)||(32614954-32614990)
chr6 (120-155)||(18332698-18332733)
chr6 (121-164)||(33017848-33017891)
chr6 (120-205)||(8977476-8977561)
chr6 (120-153)||(13391810-13391843)
chr6 (120-205)||(17141358-17141443)
chr6 (120-153)||(24979159-24979192)
chr6 (124-217)||(28759028-28759121)
chr6 (120-164)||(3261202-3261246)
chr6 (120-160)||(29065435-29065475)
chr6 (120-160)||(29120288-29120328)
chr6 (120-196)||(34733711-34733787)
[»] scaffold0155 (1 HSPs)
scaffold0155 (120-220)||(3423-3523)
[»] scaffold0018 (1 HSPs)
scaffold0018 (120-219)||(182112-182210)
[»] scaffold0009 (2 HSPs)
scaffold0009 (120-224)||(43526-43632)
scaffold0009 (121-153)||(191326-191358)
[»] scaffold0618 (1 HSPs)
scaffold0618 (120-225)||(8424-8530)
[»] scaffold0111 (1 HSPs)
scaffold0111 (120-205)||(37124-37209)
[»] scaffold0136 (1 HSPs)
scaffold0136 (120-196)||(1453-1529)
[»] scaffold0073 (1 HSPs)
scaffold0073 (120-156)||(16545-16581)
[»] scaffold0192 (1 HSPs)
scaffold0192 (121-160)||(13574-13613)
[»] scaffold0036 (1 HSPs)
scaffold0036 (120-165)||(94028-94073)


Alignment Details
Target: chr4 (Bit Score: 96; Significance: 3e-47; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6162988 - 6162885
Alignment:
Q  1 aaagttaattctagtttaaagttgggagattctgaagagatatcacttgttgattttgttacttttattgacttgtcatacacagtatgttgttatttgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||    
T  6162988 aaagttaattctagtttaaagttgggagattctgaagagatatcacttgttgattttgttacttttattgacttgttatacacagtatgttgttacttgt 6162889  T
Q  101 atat 104  Q
    ||||    
T  6162888 atat 6162885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 23553738 - 23553638
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||  ||||||||||||||||||    
T  23553738 catgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgtagtttttaatcaataattgtt 23553639  T
Q  220 g 220  Q
    |    
T  23553638 g 23553638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 41415567 - 41415671
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||| ||| |||||||||||||||||||| |||| ||| |||||||||||||| |||||||||| |||||||| ||||||||||    
T  41415567 catgtgcaaatttgcacatgataataagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtagcttttaataaataattgtt 41415666  T
Q  220 gattt 224  Q
    |||||    
T  41415667 gattt 41415671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 7349856 - 7349756
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||||||  ||||||||||    
T  7349856 catgtgtaaatttgtacatgataagaagtttaaagtagtaactttgacttaaaacttgtgttttttatattaaatatgtaacttttaacaaataattgtt 7349757  T
Q  220 g 220  Q
    |    
T  7349756 g 7349756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 23051392 - 23051490
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgt 218  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||||||||||||||  ||||||||| |||||||| |||||||||    
T  23051392 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtgttttttatataaaatatgtaacttttaataaataattgt 23051490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 35999957 - 36000050
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  35999957 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt-------aacttgtgttttttatattaaatatgtagcttttaatcaataattgtt 36000049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 53961488 - 53961386
Alignment:
Q  122 tgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttga 221  Q
    |||||||||||||||||||||||||||||||| |||||| ||| |||| ||| |||||||||||||| |||||||||| | ||||| |||||||||||||    
T  53961488 tgtgcaaatttgcacatgttaagaagtttaaattagtaattttgacttgaaatttgtgttttttatattaaatatgtaacatttaaacaataattgttga 53961389  T
Q  222 ttt 224  Q
    |||    
T  53961388 ttt 53961386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 4329762 - 4329662
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||| ||||||| |||||||||||||||||||| |||| ||| || ||||||||||| |||||||||| ||||||||||||||| |||    
T  4329762 catgtgcaaatttgcatatgttaaaaagtttaaagtagtaactttgacttgaaatttatgttttttatattaaatatgtaacttttaatcaataatcgtt 4329663  T
Q  220 g 220  Q
    |    
T  4329662 g 4329662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 29190826 - 29190926
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||  ||||||||||||| ||| |||||||| | | |||||||||||||||||    
T  29190826 catgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacttgtgtttttaatattaaatatgcaacatttaatcaataattgtt 29190925  T
Q  220 g 220  Q
    |    
T  29190926 g 29190926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 48910816 - 48910916
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttgatt 223  Q
    |||||||||||| ||||||||||||||||||||||||||||||||   || |||||||||||||  |||||||||| ||||||||||||||||||| |||    
T  48910816 tgcaaatttgcatatgttaagaagtttaaagtagtaactttaactaggaatttgtgttttttatgttaaatatgtagcttttaatcaataattgttaatt 48910915  T
Q  224 t 224  Q
    |    
T  48910916 t 48910916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 10389279 - 10389378
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    ||||| ||||||||||||||||| || ||| ||||||||| ||| ||||| |||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  10389279 atgtgtaaatttgcacatgttaaaaaatttcaagtagtaattttgacttagaacttgtgttttttatatgaaatatgtaacttttaatcaataattgttg 10389378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 16667394 - 16667479
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||||||||||||||||||||| |  ||| |||||||| |||||||||| ||||||| |||||||||| |||||    
T  16667394 catgtgcaaatttgcacatgttaagaagtttaaaatgataattttaacttgaaacttgtgtattttatattaaatatgtagctttt 16667479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 54495647 - 54495732
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||  ||||||||  ||| ||| |||||||||| |||||    
T  54495647 catgtgcaaatttgcacatgttaagaagtttaaagtggtaactttaacttggaacttgtgcatttcatattaaatatgtagctttt 54495732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 10813504 - 10813605
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataat-aaatatgtatcttttaatcaataattgt 218  Q
    |||||||| ||||||| ||| ||| |||||||||||||||||||| |||||||| |||||||||||| | | ||||||||| |||||||  |||||||||    
T  10813504 catgtgcagatttgcatatgataataagtttaaagtagtaactttgacttaaaatttgtgttttttaaattaaaatatgtaacttttaacaaataattgt 10813603  T
Q  219 tg 220  Q
    ||    
T  10813604 tg 10813605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 49228822 - 49228754
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttata 188  Q
    ||||||||||||||||| |||||||||||||||| |||||||||| ||||  |||||||||||||||||    
T  49228822 catgtgcaaatttgcacgtgttaagaagtttaaattagtaactttgacttggaacttgtgttttttata 49228754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 47326902 - 47326981
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||  ||||| ||  ||| ||| ||||||||||    
T  47326902 catgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgta 47326981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 47341698 - 47341777
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||  ||||| ||  ||| ||| ||||||||||    
T  47341698 catgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttttgcatttcatattaaatatgta 47341777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 27362559 - 27362474
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||  || |||||  ||| ||| |||||||||| |||||    
T  27362559 catgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaatttgtgcatttcatattaaatatgtagctttt 27362474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 199
Target Start/End: Complemental strand, 36971439 - 36971363
Alignment:
Q  123 gtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||| | ||||||||||| |||||| ||||||||||| ||| ||||||||   ||||||| ||||||||||    
T  36971439 gtgcaaatttacgcatgttaagaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgta 36971363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 49250345 - 49250421
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    |||||||||||||||| |||||||||| |||||||||| || ||||  || |||||||||| ||||| | |||||||    
T  49250345 catgtgcaaatttgcatatgttaagaaatttaaagtagcaagtttatattgaaacttgtgtattttacattaaatat 49250421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 18882277 - 18882310
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  18882277 catgtgcaaatttgcacatgttaagaagtttaaa 18882310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 24685005 - 24684972
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  24685005 catgtgcaaatttgcacatgttaagaagtttaaa 24684972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 49181240 - 49181155
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    ||||||||||||||||| |||||||||||| ||| |||||| |||   ||  ||||||||  ||||||| |||||||||| |||||    
T  49181240 catgtgcaaatttgcacctgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaactttt 49181155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 9759152 - 9759196
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||| ||||||||||||||||||||| |||||| ||||||||||    
T  9759152 catgtacaaatttgcacatgttaagaaatttaaaatagtaacttt 9759196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 17409992 - 17409948
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  17409992 catgtgcaaatttgcacatgataagaagtttaaaatagaaacttt 17409948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 19450911 - 19450943
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||||||||||||||||||    
T  19450911 atgtgcaaatttgcacatgttaagaagtttaaa 19450943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 19468361 - 19468329
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||||||||||||||||||    
T  19468361 atgtgcaaatttgcacatgttaagaagtttaaa 19468329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 39876998 - 39876954
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||||| |||||||||||||||||||| |||||| ||||||||||    
T  39876998 catgtgtaaatttgcacatgttaagaaatttaaaatagtaacttt 39876954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 41887579 - 41887655
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  || |||||||||| ||||| | |||||||    
T  41887579 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatat 41887655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 151
Target Start/End: Original strand, 4779446 - 4779477
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagttta 151  Q
    ||||||||||||||||||||||||||||||||    
T  4779446 catgtgcaaatttgcacatgttaagaagttta 4779477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 169
Target Start/End: Original strand, 8736823 - 8736870
Alignment:
Q  122 tgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaactt 169  Q
    |||| |||||||||||||||||||| |||||||| |||||||| ||||    
T  8736823 tgtgtaaatttgcacatgttaagaaatttaaagtggtaactttgactt 8736870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 23438322 - 23438279
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||    
T  23438322 atgtgcaaatttgcacatgttgagaattttaaaatagtaacttt 23438279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 160
Target Start/End: Complemental strand, 40049725 - 40049686
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||||||||||||||||||||||| |||||| ||||||    
T  40049725 atgtgcaaatttgcacatgttaagaaatttaaaatagtaa 40049686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 3085838 - 3085805
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||| ||||||||||||||    
T  3085838 catgtgcaaatttgcacattttaagaagtttaaa 3085805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 10658427 - 10658472
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttta 165  Q
    ||||||| |||||||||||||||| || |||||| |||||||||||    
T  10658427 catgtgctaatttgcacatgttaaaaaatttaaaatagtaacttta 10658472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 10872572 - 10872617
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttta 165  Q
    ||||||| |||||||||||||||| || |||||| |||||||||||    
T  10872572 catgtgctaatttgcacatgttaaaaaatttaaaatagtaacttta 10872617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 23545644 - 23545611
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||||||||| |||||||||    
T  23545644 catgtgcaaatttgcacatgttaataagtttaaa 23545611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 164
Target Start/End: Complemental strand, 25843459 - 25843418
Alignment:
Q  123 gtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||| | ||||||| ||||||||||||||||||||    
T  25843459 gtgcaaatttgtagatgttaaaaagtttaaagtagtaacttt 25843418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 52391466 - 52391433
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||| |||||||||||||||||||||||||||    
T  52391466 catgtgtaaatttgcacatgttaagaagtttaaa 52391433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 53376418 - 53376451
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||| |||||||||||||||||||||||||||    
T  53376418 catgtgaaaatttgcacatgttaagaagtttaaa 53376451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 149
Target Start/End: Original strand, 13214427 - 13214455
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtt 149  Q
    |||||||||||||||||||||||||||||    
T  13214427 atgtgcaaatttgcacatgttaagaagtt 13214455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 32279239 - 32279199
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||| ||||||||||||||||| ||||||||| ||||||    
T  32279239 catgtgtaaatttgcacatgttaaaaagtttaaaatagtaa 32279199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 32459498 - 32459422
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  32459498 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 32459422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 34941446 - 34941406
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    ||||||| |||||||||||| ||||||||||||| ||||||    
T  34941446 catgtgcgaatttgcacatgataagaagtttaaaatagtaa 34941406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 128 - 164
Target Start/End: Complemental strand, 40682592 - 40682556
Alignment:
Q  128 aatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  40682592 aatttgcacatgttaagaaatttaaaatagtaacttt 40682556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 42479902 - 42479934
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaa 152  Q
    ||||||||||||||||||||||||||| |||||    
T  42479902 catgtgcaaatttgcacatgttaagaaatttaa 42479934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 50352466 - 50352430
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    ||||||||||||||||||||||| |||||| ||||||    
T  50352466 tgcaaatttgcacatgttaagaaatttaaaatagtaa 50352430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 51691509 - 51691465
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||||| |||||||||||||||||||| ||| || ||||||||||    
T  51691509 catgtgtaaatttgcacatgttaagaaattttaaatagtaacttt 51691465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 3561888 - 3561992
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||| ||    
T  3561888 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttatattaaatatgtagcttttaatcaataattatt 3561987  T
Q  220 gattt 224  Q
    |||||    
T  3561988 gattt 3561992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 39757120 - 39757224
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  39757120 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaacttgaaatttgtgttttttatattaaatatgtagcttttaatcaataattgtt 39757219  T
Q  220 gattt 224  Q
    |||||    
T  39757220 gattt 39757224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 124 - 224
Target Start/End: Original strand, 384444 - 384544
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttgatt 223  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||| ||||||||| |||||||||| |||||||||||||||||||||||    
T  384444 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgttttttttatattaaatatgtagcttttaatcaataattgttgatt 384543  T
Q  224 t 224  Q
    |    
T  384544 t 384544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 9332129 - 9332025
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| |||||||||| | |||||||||||||||||    
T  9332129 catgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatttaatcaataattgtt 9332030  T
Q  220 gattt 224  Q
    |||||    
T  9332029 gattt 9332025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 5909292 - 5909392
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||| ||||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  5909292 catgtgtaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtagcttttaataaataattgtt 5909391  T
Q  220 g 220  Q
    |    
T  5909392 g 5909392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 19889508 - 19889408
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  19889508 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaataaataattgtt 19889409  T
Q  220 g 220  Q
    |    
T  19889408 g 19889408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 18102240 - 18102345
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtg-ttttttataataaatatgtatcttttaatcaataattgt 218  Q
    |||||||||||||||||||||||||||||||||| || ||||||| |||| ||||||||| ||||||||| |||||||||| | ||||||||||||||||    
T  18102240 catgtgcaaatttgcacatgttaagaagtttaaattaataactttgacttgaaacttgtgtttttttatattaaatatgtaacatttaatcaataattgt 18102339  T
Q  219 tgattt 224  Q
    ||||||    
T  18102340 tgattt 18102345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 36548470 - 36548570
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||| |||| ||||||||| ||||||||||   |||||||||||||||||    
T  36548470 catgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttaaaatttgtattttttatattaaatatgtaatatttaatcaataattgtt 36548569  T
Q  220 g 220  Q
    |    
T  36548570 g 36548570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 8170689 - 8170593
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataatt 216  Q
    ||||| ||||||| |||||||||| |||||||||||||||||||||||||||||||| | ||||||||| ||||||| || ||||||||||||||||    
T  8170689 catgtacaaatttacacatgttaaaaagtttaaagtagtaactttaacttaaaacttttattttttatattaaatatataacttttaatcaataatt 8170593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 224
Target Start/End: Original strand, 12085941 - 12086045
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||  |||||||||||||  ||||| ||| |||| |||||||||||||||||| ||||||| || |||||||| ||||||||||    
T  12085941 catgtgcaaatttgcacataataagaagtttaaataagtaattttgacttgaaacttgtgttttttatattaaatatttaacttttaataaataattgtt 12086040  T
Q  220 gattt 224  Q
    |||||    
T  12086041 gattt 12086045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 22334031 - 22334100
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataa 189  Q
    |||||||||||||| |||||||||||||||||||||||||||||| |||| ||||  |||||||||||||    
T  22334031 catgtgcaaatttgtacatgttaagaagtttaaagtagtaactttgacttgaaacacgtgttttttataa 22334100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 23982765 - 23982841
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    |||||||||||||||||| |||||||| ||||||||||||||||| ||||  ||||||||| ||||||| |||||||    
T  23982765 catgtgcaaatttgcacacgttaagaaatttaaagtagtaactttgacttggaacttgtgtattttatattaaatat 23982841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 220
Target Start/End: Original strand, 47120228 - 47120304
Alignment:
Q  144 gaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    |||||||||| |||||||||| ||||  ||||||||||||||||| |||||||||| | ||||||||||||||||||    
T  47120228 gaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaataattgttg 47120304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 7170170 - 7170091
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||  ||||||| ||| ||||||    
T  7170170 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgta 7170091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 41331466 - 41331545
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| ||||  ||||||||  ||||||| ||||||||||    
T  41331466 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgta 41331545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 24462965 - 24463071
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta-tcttttaatcaataattgt 218  Q
    |||||||||||||||||||||||||||||||||| || ||||||| |||||||  ||||   ||||||| |||||||||| | ||||||| |||| ||||    
T  24462965 catgtgcaaatttgcacatgttaagaagtttaaaataataactttgacttaaagtttgtacattttatattaaatatgtagttttttaataaatacttgt 24463064  T
Q  219 tgatttc 225  Q
    || ||||    
T  24463065 tgttttc 24463071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 8595065 - 8594998
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttata 188  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||||||||  |||||||||||||||||    
T  8595065 catgtgcaaatttacacatgttaagaagtttaaa-tagtgactttaacttggaacttgtgttttttata 8594998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 5833523 - 5833438
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||||||||||| |||||||||| ||||||||   |||| ||||||||  || |||| |||||||||| |||||    
T  5833523 catgtgcaaatttgcacatgttaaaaagtttaaagcagtaacttcgtcttagaacttgtgcattctatattaaatatgtagctttt 5833438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 24250666 - 24250602
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttt 184  Q
    |||||| ||||||| ||||| |||||||||||||||||||||||| ||||  |||||||||||||    
T  24250666 catgtggaaatttgaacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttt 24250602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 25709409 - 25709453
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  25709409 catgtgcaaatttgcacatgttaagaagtttaaaatagtaacttt 25709453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 47457471 - 47457520
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaactt 169  Q
    |||||||||||||||||||||||| || ||||||||||||||||| ||||    
T  47457471 catgtgcaaatttgcacatgttaaaaaatttaaagtagtaactttgactt 47457520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 7040262 - 7040298
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagta 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  7040262 catgtgcaaatttgcacatgttaagaagtttaaagta 7040298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 8091322 - 8091366
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||| |||||||||||||||||||| ||||||||||    
T  8091322 catgtgcaaatttacacatgttaagaagtttaaaatagtaacttt 8091366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 33343156 - 33343112
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  33343156 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 33343112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 34270429 - 34270385
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  34270429 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 34270385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 46290178 - 46290134
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  46290178 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 46290134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 32117982 - 32117907
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaata 195  Q
    ||||||||||||||||||||||||||| |||||||| | || |||| ||| |||||||| | || |||| ||||||    
T  32117982 catgtgcaaatttgcacatgttaagaaatttaaagtggcaagtttatcttgaaacttgtatattctatattaaata 32117907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 6587954 - 6587853
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagttt--aaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattg 217  Q
    ||||||||||||||||||| |||| ||||||  |||  | ||| |||   ||||||||||||| ||| ||||||||||| ||| ||||||| ||||||||    
T  6587954 catgtgcaaatttgcacatattaaaaagttttaaaaaaattaaatttgtattaaaacttgtgtatttaataataaatatttattttttaataaataattg 6587855  T
Q  218 tt 219  Q
    ||    
T  6587854 tt 6587853  T

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Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 26300739 - 26300681
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgt 178  Q
    ||||| |||||||||||||||||| ||||||||| |||||||||| | || ||||||||    
T  26300739 catgtacaaatttgcacatgttaaaaagtttaaaatagtaactttgaattgaaacttgt 26300681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 820551 - 820584
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  820551 catgtgcaaatttgcacatgttaagaagtttaaa 820584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 4969941 - 4969908
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  4969941 catgtgcaaatttgcacatgttaagaagtttaaa 4969908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 124 - 169
Target Start/End: Complemental strand, 42750447 - 42750402
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaactt 169  Q
    |||||||||||| ||||||||||||||||||||||| |||| ||||    
T  42750447 tgcaaatttgcatatgttaagaagtttaaagtagtagctttgactt 42750402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 7899496 - 7899572
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    |||||||||||||||||||||||| || |||||| | |||| |||  |||| ||||||| | ||||||| |||||||    
T  7899496 catgtgcaaatttgcacatgttaaaaaatttaaaatggtaagtttgtcttataacttgtatattttatattaaatat 7899572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 33072149 - 33072105
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||||||||||||| |||||||||||| |||||| ||||||||||    
T  33072149 catgtgcaaatttgtacatgttaagaaatttaaaatagtaacttt 33072105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 126 - 196
Target Start/End: Complemental strand, 12624798 - 12624729
Alignment:
Q  126 caaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||| |||||| | |||| |||  ||| |||||||||| ||||||| |||||||    
T  12624798 caaatttgcacatgttaagaaatttaaaatggtaagtttgtctt-aaacttgtgtattttatattaaatat 12624729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 26037261 - 26037228
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||| |||||||||||||||||    
T  26037261 catgtgcaaatttgcagatgttaagaagtttaaa 26037228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 26050471 - 26050504
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||| ||||||    
T  26050471 catgtgcaaatttgcacatgttaagaaatttaaa 26050504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 26059830 - 26059863
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||| ||||||    
T  26059830 catgtgcaaatttgcacatgttaagaaatttaaa 26059863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 29398144 - 29398177
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||| ||||||||||||||||||||||||||||    
T  29398144 catgttcaaatttgcacatgttaagaagtttaaa 29398177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 29692550 - 29692583
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||| |||||||||||||||||||    
T  29692550 catgtgcaaatttgtacatgttaagaagtttaaa 29692583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 44473522 - 44473555
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||| |||||||||||||||||||    
T  44473522 catgtgcaaatttgaacatgttaagaagtttaaa 44473555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 45501627 - 45501594
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||| ||||||||||||||    
T  45501627 catgtgcaaatttgcacatcttaagaagtttaaa 45501594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 38798080 - 38798156
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  38798080 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 38798156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 38798218 - 38798294
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  38798218 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 38798294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 42593404 - 42593480
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  42593404 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 42593480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 45645535 - 45645459
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  45645535 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 45645459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 16126569 - 16126669
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  16126569 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttttaatcaataattgtt 16126668  T
Q  220 g 220  Q
    |    
T  16126669 g 16126669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 12016834 - 12016734
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  12016834 catgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgtt 12016735  T
Q  220 g 220  Q
    |    
T  12016734 g 12016734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 16919164 - 16919264
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||| |||| |||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  16919164 catgtgcaaatttgcacatattaacaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttttaatcaataattgtt 16919263  T
Q  220 g 220  Q
    |    
T  16919264 g 16919264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 19228593 - 19228493
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| || |||||||||| |||||||||||||||||||    
T  19228593 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattgtt 19228494  T
Q  220 g 220  Q
    |    
T  19228493 g 19228493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 125 - 224
Target Start/End: Original strand, 13351226 - 13351325
Alignment:
Q  125 gcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttgattt 224  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| | |||||||| |||||||| |||||||||||||||    
T  13351226 gcaaatttgcacatgttaagaagtttaaagtagtaactttgacttagaacttgtgttttttatatttaatatgtaacttttaattaataattgttgattt 13351325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 27665054 - 27665154
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  27665054 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaataaataattgtt 27665153  T
Q  220 g 220  Q
    |    
T  27665154 g 27665154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 4821443 - 4821344
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    ||||||||||||||||||| |||||||||||||||||||||||| | || |||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  4821443 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttgatttgaaacttgtgttttttatattaaatatgtagcttttaataaataattgttg 4821344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 121 - 220
Target Start/End: Complemental strand, 22705621 - 22705522
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    |||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| |||| ||| |||||||||||    
T  22705621 atgtgcaaatttgcacattttaagaagtttaaagtagtaattttaacttgaaacttgtgttttttatattaaatatgtaactttaaattaataattgttg 22705522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 8770896 - 8770996
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| ||| || ||||||||||| |||||||||| |||||||| ||||||||||    
T  8770896 catgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaatttttgttttttatattaaatatgtaacttttaataaataattgtt 8770995  T
Q  220 g 220  Q
    |    
T  8770996 g 8770996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 14377592 - 14377492
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| |||| |||||||||||||||||| |||||||||| |||||||  ||||||||||    
T  14377592 catgtgcaaatttgtacatgataagaagtttaaagtagtaactttgacttgaaacttgtgttttttatattaaatatgtaacttttaacaaataattgtt 14377493  T
Q  220 g 220  Q
    |    
T  14377492 g 14377492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 121 - 224
Target Start/End: Original strand, 2060053 - 2060157
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatct-tttaatcaataattgtt 219  Q
    |||||||||||| ||||||||||||| ||||||||||||||||||||||  || |||||| ||||||| |||||||||| || |||||| ||||||||||    
T  2060053 atgtgcaaatttacacatgttaagaaatttaaagtagtaactttaacttggaatttgtgtcttttatattaaatatgtagctctttaataaataattgtt 2060152  T
Q  220 gattt 224  Q
    |||||    
T  2060153 gattt 2060157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 26229864 - 26229964
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||  || ||||||||||||||| |||||||||| |||||||| || | ||||||||| |||||||||| |||||||||||||||||||    
T  26229864 catgtgcaaatttgtccaggttaagaagtttaaaatagtaactttgacttaaaatttatattttttatattaaatatgtaacttttaatcaataattgtt 26229963  T
Q  220 g 220  Q
    |    
T  26229964 g 26229964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 136 - 224
Target Start/End: Original strand, 39904074 - 39904162
Alignment:
Q  136 catgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttgattt 224  Q
    ||||||||||||||||||||||||| ||||||||  ||||| ||||||||||| |||| ||||| ||||||||||||||||||||||||    
T  39904074 catgttaagaagtttaaagtagtaaatttaacttggaacttatgttttttatattaaacatgtagcttttaatcaataattgttgattt 39904162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 121 - 205
Target Start/End: Complemental strand, 15231998 - 15231914
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||  ||| ||| |||||||||| |||||    
T  15231998 atgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttaaaacttgtgcatttcatattaaatatgtaactttt 15231914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 16123446 - 16123347
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||| ||||||||||||| |||||| ||| | |   ||||||||||||||||| |||||||||| | ||||||||| |||||||    
T  16123446 catgtgcaaatttgcacatgataagaagtttaaattagtaattttgattaggaacttgtgttttttatattaaatatgtaacatttaatcaacaattgtt 16123347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 15411632 - 15411717
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||||||||||||||||||||| ||||||||||  ||| ||||||||   ||||||| |||||||||| |||||    
T  15411632 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagctttt 15411717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 220
Target Start/End: Original strand, 37471757 - 37471851
Alignment:
Q  127 aaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta-tcttttaatcaataattgttg 220  Q
    ||||||||||||||||||||||||||| ||||||||||  ||| ||||||||   ||||||| |||||||||| | ||||||| ||| |||||||    
T  37471757 aaatttgcacatgttaagaagtttaaaatagtaactttgtcttgaaacttgttcattttatattaaatatgtagttttttaataaattattgttg 37471851  T

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Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 197
Target Start/End: Original strand, 41492150 - 41492220
Alignment:
Q  127 aaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatg 197  Q
    ||||||||||||| |||||||||||||||| |||||||||||| |||||||||  |||| || ||||||||    
T  41492150 aaatttgcacatgataagaagtttaaagtaataactttaacttgaaacttgtgcattttttattaaatatg 41492220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 10690915 - 10690850
Alignment:
Q  155 tagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    |||||| ||||| || |||||| ||||||||||| |||||||||| ||||||||||||||||||||    
T  10690915 tagtaattttaatttgaaacttatgttttttatattaaatatgtagcttttaatcaataattgttg 10690850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 12919360 - 12919439
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    ||||||||||||| |||||||||| || |||||| ||||||||||| ||| ||||||||   ||||||| ||||||||||    
T  12919360 catgtgcaaatttacacatgttaaaaaatttaaaatagtaactttatcttgaaacttgttcattttatattaaatatgta 12919439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 9747485 - 9747400
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    ||||||||||||| |||||||||||||||||||| |||||| |||  |||  |||||||   ||||||| |||||||||| |||||    
T  9747485 catgtgcaaattttcacatgttaagaagtttaaaatagtaattttgtcttggaacttgttcattttatattaaatatgtagctttt 9747400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 45062366 - 45062281
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    ||||||||||||||||||| |||||||||| ||| |||||||||||  ||  ||||||||  ||||||| |||| ||||| |||||    
T  45062366 catgtgcaaatttgcacatattaagaagttcaaaatagtaactttattttggaacttgtgcattttatattaaacatgtaactttt 45062281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 24729587 - 24729631
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  24729587 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 24729631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 35729285 - 35729209
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||| |||||||||||||||| ||||||||||||||| || ||||  ||  ||||||||| ||||||| |||||||    
T  35729285 catgtacaaatttgcacatgttgagaagtttaaagtagcaaatttatattggaacttgtgtattttatagtaaatat 35729209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 154
Target Start/End: Complemental strand, 6109557 - 6109523
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaag 154  Q
    |||||||||||||||||||||||||||||||||||    
T  6109557 catgtgcaaatttgcacatgttaagaagtttaaag 6109523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 8065291 - 8065258
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  8065291 catgtgcaaatttgcacatgttaagaagtttaaa 8065258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 26003356 - 26003389
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  26003356 catgtgcaaatttgcacatgttaagaagtttaaa 26003389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 38248430 - 38248475
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttta 165  Q
    ||||||||||||||||||||||||||| |||||| |||||| ||||    
T  38248430 catgtgcaaatttgcacatgttaagaaatttaaaatagtaatttta 38248475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 3951418 - 3951342
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  || |||||||||| ||||| | |||||||    
T  3951418 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatat 3951342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 5583568 - 5583612
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||| |||||||||||||||||||||| |||||| ||||||||||    
T  5583568 catgcgcaaatttgcacatgttaagaaatttaaaatagtaacttt 5583612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 7757796 - 7757840
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||||    
T  7757796 catgtgcaaatttacacatgttaagaaatttaaaatagtaacttt 7757840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 8847955 - 8847879
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  || |||||||||| ||||| | |||||||    
T  8847955 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgtattttacattaaatat 8847879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 20566027 - 20566063
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagta 156  Q
    ||||||||||||| |||||||||||||||||||||||    
T  20566027 catgtgcaaatttacacatgttaagaagtttaaagta 20566063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 29157839 - 29157883
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| ||| || ||||||||||    
T  29157839 catgtgcaaatttgcacatgttaagaaattttaaatagtaacttt 29157883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 151
Target Start/End: Original strand, 5853473 - 5853504
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagttta 151  Q
    ||||||||||||||||||||||||||||||||    
T  5853473 catgtgcaaatttgcacatgttaagaagttta 5853504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 159
Target Start/End: Complemental strand, 9450425 - 9450386
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagta 159  Q
    ||||||||||| ||||||||||||||| ||||||||||||    
T  9450425 catgtgcaaatctgcacatgttaagaaatttaaagtagta 9450386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 151
Target Start/End: Original strand, 16493542 - 16493573
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagttta 151  Q
    ||||||||||||||||||||||||||||||||    
T  16493542 catgtgcaaatttgcacatgttaagaagttta 16493573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 160
Target Start/End: Original strand, 34213961 - 34213999
Alignment:
Q  122 tgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    ||||||||||||||||||||||||| |||||| ||||||    
T  34213961 tgtgcaaatttgcacatgttaagaaatttaaaatagtaa 34213999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 6765168 - 6765083
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||| | |||||||||||||||||||||||||  | ||| |||   ||| ||||||||  |||||| |||||||| ||||||||    
T  6765168 catgtgtagatttgcacatgttaagaagtttaaaaaaataaatttgtattataacttgtgcattttatgataaatatatatctttt 6765083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 11660904 - 11660933
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtt 149  Q
    ||||||||||||||||||||||||||||||    
T  11660904 catgtgcaaatttgcacatgttaagaagtt 11660933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 149
Target Start/End: Original strand, 43388491 - 43388520
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtt 149  Q
    ||||||||||||||||||||||||||||||    
T  43388491 catgtgcaaatttgcacatgttaagaagtt 43388520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 43941864 - 43941949
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | ||||||| ||| ||||    
T  43941864 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatatatatttttt 43941949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 3286663 - 3286587
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  3286663 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 3286587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 150
Target Start/End: Original strand, 15749212 - 15749240
Alignment:
Q  122 tgtgcaaatttgcacatgttaagaagttt 150  Q
    |||||||||||||||||||||||||||||    
T  15749212 tgtgcaaatttgcacatgttaagaagttt 15749240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 17265572 - 17265528
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||| ||||||||||| ||||||||| |||||| ||||||||||    
T  17265572 catgtccaaatttgcacttgttaagaaatttaaaatagtaacttt 17265528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 23932733 - 23932693
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||||||||||||| || |||||||||||||| ||||||    
T  23932733 catgtgcaaatttgcatatattaagaagtttaaaatagtaa 23932693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 85; Significance: 1e-40; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 313917 - 313817
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  313917 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgtt 313818  T
Q  220 g 220  Q
    |    
T  313817 g 313817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 6569995 - 6570095
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  6569995 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgtt 6570094  T
Q  220 g 220  Q
    |    
T  6570095 g 6570095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 30288874 - 30288974
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  30288874 catgtgcaaatttacacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgtt 30288973  T
Q  220 g 220  Q
    |    
T  30288974 g 30288974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 44918192 - 44918088
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||| ||  ||||| ||||||||||| |||||||||| |||||||||||||||||||    
T  44918192 catgtgcaaatttacacatgttaagaaatttaaagtagtaactttaatttggaacttatgttttttatattaaatatgtagcttttaatcaataattgtt 44918093  T
Q  220 gattt 224  Q
    |||||    
T  44918092 gattt 44918088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 39150337 - 39150437
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||  || |||||||||||||| |||||||||| |||||||| ||||||||||    
T  39150337 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaacttttaataaataattgtt 39150436  T
Q  220 g 220  Q
    |    
T  39150437 g 39150437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 122 - 224
Target Start/End: Complemental strand, 8062370 - 8062268
Alignment:
Q  122 tgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttga 221  Q
    |||||||||||||||||||||| |||||||||||||||||||||| || ||| || ||||||||||| ||||||| ||  ||||||||||||||||||||    
T  8062370 tgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaatttgaaatttatgttttttatattaaatatatagtttttaatcaataattgttga 8062271  T
Q  222 ttt 224  Q
    |||    
T  8062270 ttt 8062268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 17919621 - 17919521
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||  |||||||||||||||||||||||| ||||  || |||||||||||||| |||||||||| |||||||| ||||||||||    
T  17919621 catgtgcaaatttgcacataataagaagtttaaagtagtaactttgacttggaatttgtgttttttatattaaatatgtaacttttaataaataattgtt 17919522  T
Q  220 g 220  Q
    |    
T  17919521 g 17919521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 39930812 - 39930907
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataatt 216  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||||| || |||||||  ||||||| |||||||    
T  39930812 atgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttgaaacttgtattttttatattatatatgtagtttttaataaataatt 39930907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 195
Target Start/End: Complemental strand, 10896521 - 10896446
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaata 195  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||    
T  10896521 catgtgtaaaattgcacatgttaagaagtttaaagtagtaactttaactttgaacttgtgttttttatattaaata 10896446  T

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Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 52833491 - 52833581
Alignment:
Q  129 atttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||| ||||||||||||| |||||| ||| |||| ||| ||||| ||||||||||||||||||| |||||||| ||||||||||    
T  52833491 atttgcacatgataagaagtttaaaatagtaattttgacttgaaatttgtgatttttataataaatatgtagcttttaataaataattgtt 52833581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 121 - 199
Target Start/End: Complemental strand, 3096376 - 3096298
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    ||||||||||||||||||| ||| || ||||||||| ||| ||||||||||||||| ||||||||||| ||||||||||    
T  3096376 atgtgcaaatttgcacatgataaaaaatttaaagtaataattttaacttaaaacttatgttttttatattaaatatgta 3096298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 30172047 - 30171962
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||  ||| ||| |||||||||| |||||    
T  30172047 catgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttt 30171962  T

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Target: chr1; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 30187588 - 30187503
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||||||||||||||||||||||| |||||||| ||||  ||||||||  ||| ||| |||||||||| |||||    
T  30187588 catgtgcaaatttgcacatgttaagaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatgtagctttt 30187503  T

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Target: chr1; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 127 - 188
Target Start/End: Original strand, 44007547 - 44007608
Alignment:
Q  127 aaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttata 188  Q
    ||||||||||||||||||||||||||||||| |||||||||||  |||||||||||||||||    
T  44007547 aaatttgcacatgttaagaagtttaaagtagcaactttaacttggaacttgtgttttttata 44007608  T

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Target: chr1; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 6754639 - 6754560
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||  ||||||| ||| ||||||    
T  6754639 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgta 6754560  T

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Target: chr1; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 41624997 - 41624918
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||| ||| |||||||||||||||||||||||| ||||  ||||||||  ||||||| ||| ||||||    
T  41624997 catgtgcaaatttgcatatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgta 41624918  T

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Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 31100952 - 31101021
Alignment:
Q  129 atttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgt 198  Q
    |||||||||| ||||||| |||||||| |||||||| ||||||||||||||  ||||||| |||||||||    
T  31100952 atttgcacatattaagaaatttaaagtggtaactttgacttaaaacttgtgcattttatattaaatatgt 31101021  T

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Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 142 - 219
Target Start/End: Original strand, 32716195 - 32716272
Alignment:
Q  142 aagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||| ||| | |   ||||||||||||||||| |||||||||| | |||||||||||||||||    
T  32716195 aagaagtttaaagtagtaattttgattaggaacttgtgttttttatattaaatatgtaacatttaatcaataattgtt 32716272  T

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Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 35438883 - 35438798
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    ||||||||||||||||||||||||||| |||||| | |||| |||| |||| || |||||| ||||||| ||||||| || |||||    
T  35438883 catgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttatcttataatttgtgtattttatattaaatatataactttt 35438798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 12947564 - 12947639
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaata 195  Q
    ||||||| ||||| || ||| ||||||||||||| |||||||||| ||||||||||||||  ||||||| ||||||    
T  12947564 catgtgcgaatttacatatggtaagaagtttaaattagtaactttgacttaaaacttgtgcattttatattaaata 12947639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 30363005 - 30363084
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||| ||| || |||||| |||||||||| ||||  ||||||||  ||||||| ||||||||||    
T  30363005 catgtgcaaatttgcacatgataacaaatttaaaatagtaactttgacttggaacttgtgcattttatattaaatatgta 30363084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 217
Target Start/End: Complemental strand, 9516749 - 9516651
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatc-ttttaatcaataattg 217  Q
    |||||| |||||||||||||||||||| |||||| | |||| |||  |||| ||||||||| ||||||| ||||||| || | ||||||| ||||||||    
T  9516749 catgtgtaaatttgcacatgttaagaaatttaaaatggtaagtttctcttataacttgtgtattttatattaaatatataactttttaataaataattg 9516651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 205
Target Start/End: Complemental strand, 5057166 - 5057085
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||| ||||| | ||||||||||| |||||||| |||| ||||||||   ||||||| ||||||| ||||||||    
T  5057166 tgcaaatttgcaaatgttcaaaagtttaaagtggtaactttgacttgaaacttgtacattttatattaaatatatatctttt 5057085  T

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Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 188
Target Start/End: Original strand, 21391924 - 21391977
Alignment:
Q  135 acatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttata 188  Q
    ||||||||||||||||||||||||||||||  |||| ||||||||| |||||||    
T  21391924 acatgttaagaagtttaaagtagtaactttggcttagaacttgtgtattttata 21391977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 1502730 - 1502774
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  1502730 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 1502774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 156
Target Start/End: Complemental strand, 6307670 - 6307634
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagta 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  6307670 catgtgcaaatttgcacatgttaagaagtttaaagta 6307634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 23576424 - 23576468
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  23576424 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 23576468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 36490947 - 36490903
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  36490947 catgagcaaatttgcacatgttaagaagtttaaaatagtaacttt 36490903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 5875225 - 5875272
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaac 167  Q
    |||||||||||||||||||||||||||||||||| ||| || ||||||    
T  5875225 catgtgcaaatttgcacatgttaagaagtttaaaatagaaattttaac 5875272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 21854139 - 21854214
Alignment:
Q  132 tgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaa 207  Q
    |||||||||||| ||||||||||| |||||||| ||||  |||||||   ||||||| |||||| |||||||||||    
T  21854139 tgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtacattttatattaaataggtatcttttaa 21854214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 6180354 - 6180321
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  6180354 catgtgcaaatttgcacatgttaagaagtttaaa 6180321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 196
Target Start/End: Complemental strand, 24669088 - 24669019
Alignment:
Q  127 aaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||||| |||||| ||||  ||| ||||| ||  ||||||| |||||||    
T  24669088 aaatttgcacatgttaagaagtttaaaatagtaaatttatattataacttatgcattttatattaaatat 24669019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 34802135 - 34802102
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  34802135 catgtgcaaatttgcacatgttaagaagtttaaa 34802102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 35512893 - 35512860
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  35512893 catgtgcaaatttgcacatgttaagaagtttaaa 35512860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 4249374 - 4249298
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    |||||||||||| ||||||||||| |||||||||||  ||| ||||  || |||||||||| ||||| | |||||||    
T  4249374 catgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatat 4249298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 4249698 - 4249622
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    |||||||||||| ||||||||||| |||||||||||  ||| ||||  || |||||||||| ||||| | |||||||    
T  4249698 catgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatat 4249622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 4250022 - 4249946
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    |||||||||||| ||||||||||| |||||||||||  ||| ||||  || |||||||||| ||||| | |||||||    
T  4250022 catgtgcaaattcgcacatgttaataagtttaaagttttaagtttatattgaaacttgtgtattttacattaaatat 4249946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 22167503 - 22167459
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||||||||||||||||||| ||||||||||||| ||| ||||||    
T  22167503 catgtgcaaatttgcacatgataagaagtttaaaatagaaacttt 22167459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 25465326 - 25465286
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||||||||||||||||||||||||||| ||| ||||||    
T  25465326 catgtgcaaatttgcacatgttaagaagttcaaaatagtaa 25465286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 19348860 - 19348911
Alignment:
Q  127 aaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgt 178  Q
    |||||||||  |||||||||||||||||||||| ||||||||| ||| ||||    
T  19348860 aaatttgcatgtgttaagaagtttaaagtagtagctttaacttgaaatttgt 19348911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 226
Target Start/End: Complemental strand, 38812908 - 38812801
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt-aatcaataattgt 218  Q
    |||||||||||||||||||||||||||||| ||| ||| || ||||  || ||||||||   ||| ||| |||||||  | ||||| ||| |||||||||    
T  38812908 catgtgcaaatttgcacatgttaagaagttcaaaatagaaattttatattgaaacttgtacatttaatattaaatataaaacttttgaataaataattgt 38812809  T
Q  219 tgatttct 226  Q
    || |||||    
T  38812808 tgttttct 38812801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 180
Target Start/End: Original strand, 2222246 - 2222304
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgt 180  Q
    |||||| |||||| ||||||||||||| |||||  || |||||||| ||||||||||||||    
T  2222246 catgtgaaaatttacacatgttaagaaatttaa--taataactttatcttaaaacttgtgt 2222304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 13322044 - 13322011
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||| |||||||||||||||||    
T  13322044 catgtgcaaatttgcatatgttaagaagtttaaa 13322011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 39310796 - 39310829
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||||||||| |||||||||    
T  39310796 catgtgcaaatttgcacatgttaaaaagtttaaa 39310829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 51382482 - 51382449
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||| ||||||||||||||||||||||||    
T  51382482 catgtgcaactttgcacatgttaagaagtttaaa 51382449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 51920441 - 51920542
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt-aatcaataattgt 218  Q
    |||||||||||||||||||||||| || |||||| ||| || ||||  |||||| |||| | ||| ||| |||||||  | ||||| ||| |||||||||    
T  51920441 catgtgcaaatttgcacatgttaataaatttaaaatagaaattttatattaaaatttgtatatttaatattaaatataaaacttttgaataaataattgt 51920540  T
Q  219 tg 220  Q
    ||    
T  51920541 tg 51920542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 28016347 - 28016315
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||||||||||| ||||||    
T  28016347 atgtgcaaatttgcacatgttaagaattttaaa 28016315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 32201791 - 32201759
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||| ||||||||||||||    
T  32201791 atgtgcaaatttgcacatattaagaagtttaaa 32201759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 188
Target Start/End: Original strand, 41676570 - 41676638
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttata 188  Q
    ||||||||||||||||||||||||||| || ||| || ||| |||   ||||||||||||  |||||||    
T  41676570 catgtgcaaatttgcacatgttaagaaattcaaaataataattttgtattaaaacttgtgcattttata 41676638  T

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Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 42589340 - 42589264
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  42589340 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 42589264  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 44013093 - 44013017
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  44013093 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 44013017  T

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Target: chr3 (Bit Score: 83; Significance: 2e-39; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 122 - 220
Target Start/End: Original strand, 16875037 - 16875135
Alignment:
Q  122 tgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  16875037 tgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttttaatcaacaattgttg 16875135  T

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Target: chr3; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 3863497 - 3863393
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||  ||||||||||||||||| |||||||||| ||||||||||||||||| |    
T  3863497 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttagcttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgct 3863398  T
Q  220 gattt 224  Q
    |||||    
T  3863397 gattt 3863393  T

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Target: chr3; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 222
Target Start/End: Complemental strand, 29686488 - 29686386
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || |||| || |||||||| ||||||||||    
T  29686488 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgttttttatattacatatatagcttttaataaataattgtt 29686389  T
Q  220 gat 222  Q
    |||    
T  29686388 gat 29686386  T

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Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 11611082 - 11610982
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  11611082 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaataaataattgtt 11610983  T
Q  220 g 220  Q
    |    
T  11610982 g 11610982  T

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Target: chr3; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 130 - 220
Target Start/End: Complemental strand, 50364348 - 50364258
Alignment:
Q  130 tttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    |||||||||| |||||||||||||||||||||||| ||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  50364348 tttgcacatgctaagaagtttaaagtagtaactttgacttggaacttgtgttttttatattaaatatgtaacttttaatcaataattgttg 50364258  T

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Target: chr3; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 20938225 - 20938125
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgtt-ttttataataaatatgtatcttttaatcaataattgt 218  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||  |||||||||| ||||||| ||||||||||  |||||||||||||||||    
T  20938225 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgtttttttatattaaatatgtaatttttaatcaataattgt 20938126  T
Q  219 t 219  Q
    |    
T  20938125 t 20938125  T

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Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 40497215 - 40497109
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta-tcttttaatcaataattgt 218  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||  ||||||| ||| ||||||   ||||||| | |||||||    
T  40497215 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttaacttagaacttgtgcattttatattaactatgtagatttttaataattaattgt 40497116  T
Q  219 tgatttc 225  Q
    |||||||    
T  40497115 tgatttc 40497109  T

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Target: chr3; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 32553534 - 32553430
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||| |||||| |||||||||||||||||||| || ||||||||| || |||||||||||||||||| ||||||||||   |||||  ||||||| ||    
T  32553534 catgtgtaaatttacacatgttaagaagtttaaattaataactttaatttgaaacttgtgttttttatattaaatatgtaatatttaactaataattatt 32553435  T
Q  220 gattt 224  Q
    |||||    
T  32553434 gattt 32553430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 13495462 - 13495357
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta-tcttttaatcaataattgt 218  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||| ||||  ||||||||  ||||||| ||||||||||   ||||||| |||||||||    
T  13495462 catgtgaaaatttgcacatgataagaagtttaaagtagtaattttgacttggaacttgtgcattttatattaaatatgtaggtttttaataaataattgt 13495363  T
Q  219 tgattt 224  Q
    ||||||    
T  13495362 tgattt 13495357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 24978814 - 24978718
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataatt 216  Q
    ||||| ||| |||||||||||||| |||||||||||||| || || |||| |||||||||||||||| | | ||||||||  |||||||||||||||    
T  24978814 catgtacaagtttgcacatgttaacaagtttaaagtagttacgttgacttgaaacttgtgttttttaaatttaatatgtaatttttaatcaataatt 24978718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 38389615 - 38389530
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||  ||||||||  ||| ||| |||||||||| |||||    
T  38389615 catgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttt 38389530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 204
Target Start/End: Complemental strand, 23523114 - 23523030
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttt 204  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| ||||  ||||||||  ||| ||| |||||||||| ||||    
T  23523114 catgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagcttt 23523030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 38786343 - 38786433
Alignment:
Q  129 atttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||| |||||| ||| | || ||| |||||  ||||||| ||||| ||||| ||||||| ||||||||||    
T  38786343 atttgcacatgttaagaagtttaaaatagtaattttgatttgaaatttgtggattttatactaaatgtgtattttttaataaataattgtt 38786433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 220
Target Start/End: Original strand, 54621239 - 54621328
Alignment:
Q  130 tttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    ||||||||| |||| || |||||| |||||||||| ||||  || |||||||||||||| |||||||||| | ||||||||||||||||||    
T  54621239 tttgcacattttaaaaa-tttaaattagtaactttgacttggaagttgtgttttttatattaaatatgtaacatttaatcaataattgttg 54621328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 11611144 - 11611095
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaactt 169  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  11611144 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgactt 11611095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 187
Target Start/End: Complemental strand, 41151801 - 41151734
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttat 187  Q
    ||||||||||||| |||||| |||||||||||||||||||| || |||||  ||||||| ||||||||    
T  41151801 catgtgcaaatttacacatgataagaagtttaaagtagtaatttgaacttggaacttgtattttttat 41151734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 36426419 - 36426504
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||| |||||| |||||||||||||||||||||| |||| ||| ||||  ||||||||  ||| ||| |||||||||| |||||    
T  36426419 catgtgtaaatttacacatgttaagaagtttaaagtggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttt 36426504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 164
Target Start/End: Complemental strand, 36812419 - 36812382
Alignment:
Q  127 aaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||||||||||||||    
T  36812419 aaatttgcacatgttaagaagtttaaagtagtaacttt 36812382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 2571436 - 2571392
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  2571436 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 2571392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 49396548 - 49396472
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    |||||||||||||| |||| ||||||||||||||||||||| ||| | |||||| || ||  ||||||| |||||||    
T  49396548 catgtgcaaatttgtacatattaagaagtttaaagtagtaaatttgaattaaaatttatgcattttatattaaatat 49396472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 8165814 - 8165781
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  8165814 catgtgcaaatttgcacatgttaagaagtttaaa 8165781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 35414819 - 35414864
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttta 165  Q
    ||||||||||||| |||||||||||||||| ||| |||||||||||    
T  35414819 catgtgcaaatttacacatgttaagaagttcaaaatagtaacttta 35414864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 40930219 - 40930186
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  40930219 catgtgcaaatttgcacatgttaagaagtttaaa 40930186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 50204571 - 50204538
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  50204571 catgtgcaaatttgcacatgttaagaagtttaaa 50204538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 175 - 220
Target Start/End: Original strand, 51339249 - 51339294
Alignment:
Q  175 ttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    |||||||||||||| |||||| ||| ||||||||||||||||||||    
T  51339249 ttgtgttttttatattaaatacgtagcttttaatcaataattgttg 51339294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 10307934 - 10307894
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  10307934 catgtgcaaatttgcacatgttaagaaatttaaaatagtaa 10307894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 23638059 - 23638135
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    |||| |||||||||||||||||||||| |||||| | |||| ||   ||| |||||||||| ||||||| |||||||    
T  23638059 catgagcaaatttgcacatgttaagaaatttaaaatggtaagttagtcttgaaacttgtgtattttatattaaatat 23638135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 46492353 - 46492397
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||| |||| |||||||| |||||||||||||||||    
T  46492353 catgtgcaaattttcacacgttaagaaatttaaagtagtaacttt 46492397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 51618215 - 51618171
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||||||| || | ||||||||    
T  51618215 catgtgcaaatttgcacatgttaagaagtttcaaattgtaacttt 51618171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 151
Target Start/End: Original strand, 33474483 - 33474514
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagttta 151  Q
    ||||||||||||||||||||||||||||||||    
T  33474483 catgtgcaaatttgcacatgttaagaagttta 33474514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 195
Target Start/End: Original strand, 39364884 - 39364955
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaata 195  Q
    |||||||||||||||||||| |||||| || ||||||||||  |||  ||||||||  ||||||| ||||||    
T  39364884 tgcaaatttgcacatgttaacaagttttaaatagtaactttgtcttgtaacttgtgcattttatattaaata 39364955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 45983674 - 45983616
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgt 178  Q
    |||||||||||||||||| ||||||||||||||| ||| || ||||  || ||||||||    
T  45983674 catgtgcaaatttgcacaggttaagaagtttaaaatagaaattttatattgaaacttgt 45983616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 153
Target Start/End: Original strand, 23803060 - 23803089
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||    
T  23803060 tgcaaatttgcacatgttaagaagtttaaa 23803089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 178
Target Start/End: Complemental strand, 27549711 - 27549654
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgt 178  Q
    ||||||||||||||||||||||| || |||| |||||||| |||  |||| |||||||    
T  27549711 atgtgcaaatttgcacatgttaaaaaatttagagtagtaagtttgtcttataacttgt 27549654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 42180220 - 42180187
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||| |||||||||||||||||||||||||||    
T  42180220 catgtgtaaatttgcacatgttaagaagtttaaa 42180187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 12515484 - 12515528
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||||| ||||||||||||||||| || |||||| ||||||||||    
T  12515484 catgtgtaaatttgcacatgttaaaaaatttaaaatagtaacttt 12515528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 29932362 - 29932438
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  29932362 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 29932438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 29981516 - 29981592
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  29981516 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 29981592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Complemental strand, 31318809 - 31318777
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaa 152  Q
    |||||| ||||||||||||||||||||||||||    
T  31318809 catgtgaaaatttgcacatgttaagaagtttaa 31318777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 37055376 - 37055416
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||| |||||||||||| |||||||||||||| ||||||    
T  37055376 catgtgaaaatttgcacatattaagaagtttaaaatagtaa 37055416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 38277500 - 38277468
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||| |||||||||||||||||||||||||||    
T  38277500 atgtgtaaatttgcacatgttaagaagtttaaa 38277468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Complemental strand, 51401607 - 51401575
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||| ||||||||||||||||||||||||||||    
T  51401607 atgtacaaatttgcacatgttaagaagtttaaa 51401575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 54527717 - 54527749
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||||||||||| ||||||    
T  54527717 atgtgcaaatttgcacatgttaagaaatttaaa 54527749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 81; Significance: 3e-38; HSPs: 57)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 10129271 - 10129171
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| |||||||||| |||||||||||||||||||    
T  10129271 catgtgcaaatttgcacatgttaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgtt 10129172  T
Q  220 g 220  Q
    |    
T  10129171 g 10129171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 9801836 - 9801732
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| ||||| ||||| ||||||| || |||||||||||||||||||    
T  9801836 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttgaaacttatgtttgttatattaaatatataacttttaatcaataattgtt 9801737  T
Q  220 gattt 224  Q
    |||||    
T  9801736 gattt 9801732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 13327951 - 13328051
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||| |||||||||||||||||| |||||||||| | |||||||||||||||||    
T  13327951 catgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttgaaacttgtgttttttatattaaatatgtaacatttaatcaataattgtt 13328050  T
Q  220 g 220  Q
    |    
T  13328051 g 13328051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 7140469 - 7140569
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||  ||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  7140469 catgtgcaaatttgcacatattaagaagtttaaagtagtaattttaacttggaacttgtgttttttatattaaatatgtagtttttaatcaataattgtt 7140568  T
Q  220 g 220  Q
    |    
T  7140569 g 7140569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 18567426 - 18567526
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||| ||||  ||| ||||||||||||| |||||||||| | |||||||||||||||||    
T  18567426 catgtgcaaatttgcacatgttaagaagtttaaattagtaactttgacttggaacatgtgttttttatattaaatatgtaacatttaatcaataattgtt 18567525  T
Q  220 g 220  Q
    |    
T  18567526 g 18567526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 39701813 - 39701913
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||| |||||||||||||||||||| |||| ||| |||||||||||||| |||||||||| |||||||| | ||||||||    
T  39701813 catgtgcaaatttgcacatgttaacaagtttaaagtagtaactttgacttgaaatttgtgttttttatattaaatatgtaacttttaattagtaattgtt 39701912  T
Q  220 g 220  Q
    |    
T  39701913 g 39701913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 124 - 220
Target Start/End: Original strand, 40210835 - 40210931
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    |||||||||||||||||||||| ||||||| |||||||||| ||||  || |||||||||||||| |||||||||| | ||||||||||||||||||    
T  40210835 tgcaaatttgcacatgttaagacgtttaaattagtaactttgactttgaatttgtgttttttatattaaatatgtaacatttaatcaataattgttg 40210931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 126 - 206
Target Start/End: Original strand, 45519578 - 45519658
Alignment:
Q  126 caaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttta 206  Q
    |||||||||||||| |||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||    
T  45519578 caaatttgcacatgataagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagctttta 45519658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 19343846 - 19343947
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgtttttt-ataataaatatgtatcttttaatcaataattgt 218  Q
    |||||||||||||||||||||||| | |||||||||||||| ||| |||| |||||||| |||||| ||| |||||||||| |||||| |||||||||||    
T  19343846 catgtgcaaatttgcacatgttaacacgtttaaagtagtaattttgacttgaaacttgtattttttaatattaaatatgtaacttttactcaataattgt 19343945  T
Q  219 tg 220  Q
    ||    
T  19343946 tg 19343947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 1203769 - 1203673
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataatt 216  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| | | ||||||||||||||||||| |||||||||| |  ||||| |||||||    
T  1203769 catgtgcaaatttgcacatgataagaagtttaaagtagtaattttgattaaaaacttgtgttttttatattaaatatgtaacagttaattaataatt 1203673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 8140727 - 8140635
Alignment:
Q  128 aatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    |||||||||||||||||||| |||||||| ||| ||| |||||||| || ||||||||||| |||||||||| |||||||| |||||||||||    
T  8140727 aatttgcacatgttaagaagattaaagtaataattttgacttaaaatttatgttttttatattaaatatgtagcttttaataaataattgttg 8140635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 26682236 - 26682130
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatc-ttttaatcaataattgt 218  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||  ||||||||  ||||||| ||||| |||| | ||||||| |||||||||    
T  26682236 catgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatgtgtagctttttaataaataattgt 26682137  T
Q  219 tgatttc 225  Q
    || ||||    
T  26682136 tgttttc 26682130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 188
Target Start/End: Complemental strand, 31451485 - 31451424
Alignment:
Q  127 aaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttata 188  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  31451485 aaatttgcacgtgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttata 31451424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 9744013 - 9743929
Alignment:
Q  136 catgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    |||| |||||||||||||||||||||||| ||||  ||||| ||||||||||| |||||||||| |||||||| |||||||||||    
T  9744013 catgataagaagtttaaagtagtaactttgacttggaacttatgttttttatattaaatatgtaacttttaataaataattgttg 9743929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 14816136 - 14816214
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| | |||||| ||||||||||    
T  14816136 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtg-tatttatattaaatatgta 14816214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 14829604 - 14829526
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||| | |||||| ||||||||||    
T  14829604 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttaaaacttgtg-tatttatattaaatatgta 14829526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 35678285 - 35678363
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||| ||||||||| | |||||| ||||||||||    
T  35678285 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtg-tatttatattaaatatgta 35678363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 225
Target Start/End: Complemental strand, 44091486 - 44091380
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta-tcttttaatcaataattgt 218  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||| | ||| ||||||||  ||||||| ||||| |||| | ||||||| |||||||||    
T  44091486 catgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataattgt 44091387  T
Q  219 tgatttc 225  Q
    || ||||    
T  44091386 tgttttc 44091380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 4080404 - 4080463
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtg 179  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||| |||||||||    
T  4080404 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaacttgtg 4080463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 39024867 - 39024946
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||  || |||||  ||||||| ||| ||||||    
T  39024867 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaatttgtgcattttatattaactatgta 39024946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 177
Target Start/End: Complemental strand, 45518120 - 45518063
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttg 177  Q
    |||||||||||||| ||||  ||||||||||||| |||||||||||||||||||||||    
T  45518120 catgtgcaaatttgtacataataagaagtttaaactagtaactttaacttaaaacttg 45518063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 4084553 - 4084609
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaactt 176  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||    
T  4084553 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaactt 4084609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 176
Target Start/End: Original strand, 4102860 - 4102916
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaactt 176  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| |||| ||||||    
T  4102860 catgtgcaaatttgcacatgataagaaatttaaagtagtaactttgacttgaaactt 4102916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 8284578 - 8284653
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaata 195  Q
    |||||||||||||| ||||||||||||||||||| ||| |||||  ||||  ||||||||| ||||||| ||||||    
T  8284578 catgtgcaaatttgtacatgttaagaagtttaaattagcaacttcgacttggaacttgtgtattttatattaaata 8284653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 178
Target Start/End: Complemental strand, 22838393 - 22838335
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgt 178  Q
    |||||||||||||||||||||||||||||||||| ||  |||||||  |||||||||||    
T  22838393 catgtgcaaatttgcacatgttaagaagtttaaaataaaaactttacattaaaacttgt 22838335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 31812281 - 31812196
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    ||||||||||||||||||| |||||||||||||| | |||| ||| ||||  ||||||||  ||| ||| |||||||||| |||||    
T  31812281 catgtgcaaatttgcacatattaagaagtttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttt 31812196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 2161555 - 2161511
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  2161555 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 2161511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 3306065 - 3306109
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  3306065 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 3306109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 34405085 - 34405125
Alignment:
Q  129 atttgcacatgttaagaagtttaaagtagtaactttaactt 169  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  34405085 atttgcacatgttaagaagtttaaagtaataactttaactt 34405125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 36967080 - 36967124
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||||||||||||||||||||||||||||||||| ||| ||||||    
T  36967080 catgtgcaaatttgcacatgttaagaagtttaaaatagaaacttt 36967124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 13496719 - 13496757
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagt 158  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  13496719 catgtgcaaatttgcacatgttaagaagtttaaaatagt 13496757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 35740948 - 35741018
Alignment:
Q  129 atttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    ||||||||||| ||| || ||||| ||||||| ||| ||| |||| |||||||||||||| ||||||||||    
T  35740948 atttgcacatgataaaaattttaatgtagtaattttgactaaaaatttgtgttttttatattaaatatgta 35741018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 178
Target Start/End: Original strand, 38212954 - 38213012
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgt 178  Q
    |||||||||||||||||||||||||||||||||| ||| || ||||  || ||||||||    
T  38212954 catgtgcaaatttgcacatgttaagaagtttaaaatagaaattttatattgaaacttgt 38213012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 12189598 - 12189643
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttta 165  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||    
T  12189598 catgtgcaaatttgcacatgataagaagtttaaaatagaaacttta 12189643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 12434026 - 12434071
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttta 165  Q
    |||||||||||||||||||| ||||||||||||| ||| |||||||    
T  12434026 catgtgcaaatttgcacatgataagaagtttaaaatagaaacttta 12434071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 27874691 - 27874724
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  27874691 catgtgcaaatttgcacatgttaagaagtttaaa 27874724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 28014868 - 28014901
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  28014868 catgtgcaaatttgcacatgttaagaagtttaaa 28014901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 141 - 214
Target Start/End: Complemental strand, 38527971 - 38527898
Alignment:
Q  141 taagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataa 214  Q
    |||||||||||||||| ||| ||| | ||  || |||||||||||||| |||||||||| |||||||| |||||    
T  38527971 taagaagtttaaagtaataattttgatttggaatttgtgttttttatattaaatatgtagcttttaataaataa 38527898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 160
Target Start/End: Complemental strand, 6818185 - 6818145
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||||||||||| ||||||||||||||||||| ||||||    
T  6818185 catgtgcaaatttgtacatgttaagaagtttaaaatagtaa 6818145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 14961673 - 14961713
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||||||||||||||||| ||||||||||||| ||||||    
T  14961673 catgtgcaaatttgcacatgctaagaagtttaaaatagtaa 14961713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 26364000 - 26364044
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||| ||||||||||| |||||| ||||||||||    
T  26364000 catgtgcaaatttgcgcatgttaagaaatttaaaatagtaacttt 26364044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 297258 - 297219
Alignment:
Q  125 gcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||||| || |||||||    
T  297258 gcaaatttgcacatgttaagaagtttaaaataataacttt 297219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 151
Target Start/End: Original strand, 40225997 - 40226028
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagttta 151  Q
    ||||||||||||||||||||||||||||||||    
T  40225997 catgtgcaaatttgcacatgttaagaagttta 40226028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 217
Target Start/End: Original strand, 7393255 - 7393352
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatc-ttttaatcaataattg 217  Q
    ||||||| |||||||||||||||| || |||||| |||||| |||  |||  ||||||||| ||||||| ||||||| || | ||||||| ||||||||    
T  7393255 catgtgcgaatttgcacatgttaaaaaatttaaaatagtaa-tttgtcttgtaacttgtgtattttatattaaatatataactttttaataaataattg 7393352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 39430645 - 39430555
Alignment:
Q  129 atttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||| |||||| || |||||||||||  |||||| || | | ||||||| ||||| | ||  ||||||| ||||||||||    
T  39430645 atttgcacatgttaaaaagttttaaatagtaactttatattaaaatttatatattttatattaaatgtataatttttaataaataattgtt 39430555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 5573454 - 5573421
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||| |||||||||||||||||||    
T  5573454 catgtgcaaatttgtacatgttaagaagtttaaa 5573421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 9580119 - 9580152
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||| ||||||||||||||||||||    
T  9580119 catgtgcaaatttacacatgttaagaagtttaaa 9580152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 26834729 - 26834644
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||| || ||||||| |||||| | |||| ||| ||||  ||||||||  ||| ||| |||||||||| |||||    
T  26834729 catgtgcaaatttgcatatattaagaaatttaaaatggtaattttgacttggaacttgtgcatttcatattaaatatgtagctttt 26834644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 42204 - 42280
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   |||||| |||| ||||  || |||||||||| ||||| | |||||||    
T  42204 catgtgcaaatttgcacatgttaaggatactaaagtggtaagtttatattgaaacttgtgtattttacattaaatat 42280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 10543639 - 10543715
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  10543639 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 10543715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 12132147 - 12132111
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||| |||||||||||||||| |||||||||||||    
T  12132147 tgcaaacttgcacatgttaagaaatttaaagtagtaa 12132111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 14391588 - 14391620
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||| ||||||||||||||||||||||||||||    
T  14391588 atgtccaaatttgcacatgttaagaagtttaaa 14391620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 15198910 - 15198954
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||||||||||||||||||||||| || ||| || ||||||||||    
T  15198910 catgtgcaaatttgcacatgttaaaaaattttaaatagtaacttt 15198954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 16445747 - 16445779
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||| ||||||||||||||    
T  16445747 atgtgcaaatttgcacatattaagaagtttaaa 16445779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 32089480 - 32089516
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    ||||||||||||||||||||| |||||||| ||||||    
T  32089480 tgcaaatttgcacatgttaagcagtttaaaatagtaa 32089516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 180
Target Start/End: Complemental strand, 42781642 - 42781582
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgt 180  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  || ||||||||||    
T  42781642 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattgaaacttgtgt 42781582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 153
Target Start/End: Complemental strand, 45006132 - 45006104
Alignment:
Q  125 gcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||||||||||||||    
T  45006132 gcaaatttgcacatgttaagaagtttaaa 45006104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 4047580 - 4047480
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||||||| |||||||    
T  4047580 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaacaattgtt 4047481  T
Q  220 g 220  Q
    |    
T  4047480 g 4047480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 34578179 - 34578075
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||| |||||||    
T  34578179 catgtgcaaatttgcacatgttaaaaagtttaaaatagtaactttaacttaaaacttgtattttttatattaaatatgtagcttttaatcaacaattgtt 34578080  T
Q  220 gattt 224  Q
    |||||    
T  34578079 gattt 34578075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 2795691 - 2795591
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| || |||||||||| |||||||||||||||||||    
T  2795691 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattgtt 2795592  T
Q  220 g 220  Q
    |    
T  2795591 g 2795591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 128 - 220
Target Start/End: Original strand, 30328345 - 30328437
Alignment:
Q  128 aatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  30328345 aatttgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaataattgttg 30328437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 14466504 - 14466598
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataa 214  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||||||    
T  14466504 catgtgcaaatttagacatgttaagaagtttaaagtagtaactttaacttgaaacttgtgttttttatattaaatatgtagcttttaatcaataa 14466598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 41350370 - 41350266
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||  |||||||| |||||||| |||||||||| |||||||| ||||||||||    
T  41350370 catgtgcaaatttgcacatgttaagaagtttaaagtagtaattttgacttggaacttgtgctttttatattaaatatgtaacttttaataaataattgtt 41350271  T
Q  220 gattt 224  Q
    |||||    
T  41350270 gattt 41350266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 31365960 - 31366060
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||| ||||||||||||||||||| |||||||||| ||||  ||||||||||||||||| |||||||||| | |||||||||||||||||    
T  31365960 catgtgcaaatttgtacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaataattgtt 31366059  T
Q  220 g 220  Q
    |    
T  31366060 g 31366060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 15191034 - 15190941
Alignment:
Q  127 aaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgtt-ttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||| |||||||||| |||||||||||||||||||    
T  15191034 aaatttgcacatgttaagaagtttaaagtagtaattttgacttgaaacttgtgtttttttatattaaatatgtaacttttaatcaataattgtt 15190941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 123 - 220
Target Start/End: Complemental strand, 28630043 - 28629946
Alignment:
Q  123 gtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    ||||||||||||||||| |||||||||||||||| || ||||||||| | |||||||||||||||| |||||||||| |||||||| |||||||||||    
T  28630043 gtgcaaatttgcacatgataagaagtttaaagtaatatctttaacttgagacttgtgttttttatattaaatatgtaacttttaataaataattgttg 28629946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 132 - 216
Target Start/End: Complemental strand, 9184363 - 9184279
Alignment:
Q  132 tgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataatt 216  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||| ||||||||||  |||||||||||||||    
T  9184363 tgcacatgttaagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagtttttaatcaataatt 9184279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 121 - 220
Target Start/End: Original strand, 12642004 - 12642103
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    ||||||||||||||||||||||||||||||||| || ||||||| | ||  ||||||||||||||||| |||||||||| | ||||| | ||||||||||    
T  12642004 atgtgcaaatttgcacatgttaagaagtttaaattaataactttgatttggaacttgtgttttttatattaaatatgtaacatttaaacgataattgttg 12642103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 11376128 - 11376023
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaactt-gtgttttttataataaatatgtatcttttaatcaataattgt 218  Q
    |||||| ||||||  ||||| ||| |||||||||||||||||||| |||| ||| || |||||||||||| |||||||||| |||||||| ||||||| |    
T  11376128 catgtgtaaatttatacatgataaaaagtttaaagtagtaactttgacttgaaattttgtgttttttatattaaatatgtagcttttaataaataattat 11376029  T
Q  219 tgattt 224  Q
    ||||||    
T  11376028 tgattt 11376023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 176
Target Start/End: Complemental strand, 30893797 - 30893741
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaactt 176  Q
    |||||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  30893797 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttgacttaaaactt 30893741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 8103590 - 8103669
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||  ||||||||  ||||||| ||| ||||||    
T  8103590 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttggaacttgtgcattttatattaattatgta 8103669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 120 - 179
Target Start/End: Complemental strand, 11636899 - 11636840
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtg 179  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||    
T  11636899 catgtgcaaatttgcacatgataagaagtttaaagtagtaactttgacttgaaacttgtg 11636840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 30839949 - 30839905
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  30839949 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 30839905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 36597747 - 36597703
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  36597747 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 36597703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 24329657 - 24329732
Alignment:
Q  132 tgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaa 207  Q
    |||||||||||| ||||||||||| |||||||| ||||  |||||||   ||||||| |||||| |||||||||||    
T  24329657 tgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtacattttatattaaataggtatcttttaa 24329732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 3398388 - 3398355
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  3398388 catgtgcaaatttgcacatgttaagaagtttaaa 3398355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 6863724 - 6863679
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttta 165  Q
    |||||||||||||||||||||||| || |||||| |||||||||||    
T  6863724 catgtgcaaatttgcacatgttaaaaaatttaaaatagtaacttta 6863679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 121 - 178
Target Start/End: Original strand, 23995427 - 23995484
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgt 178  Q
    ||||||||||||| ||||||||||||||||||| |||||| ||||  || ||||||||    
T  23995427 atgtgcaaatttgtacatgttaagaagtttaaaatagtaattttatattgaaacttgt 23995484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 24014698 - 24014783
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||| ||||||||||||||||| |||||| || ||||||||| |  || |||||||| | |||| || ||||||| ||||||||    
T  24014698 catgtgaaaatttgcacatgttaaaaagttttaaatagtaacttcacattgaaacttgtatattttgtattaaatatatatctttt 24014783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 16174636 - 16174691
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtg 179  Q
    |||||||||||||||  |||||| ||||||||||||||||| | || |||||||||    
T  16174636 tgcaaatttgcacatcataagaaatttaaagtagtaactttgaattgaaacttgtg 16174691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 195
Target Start/End: Original strand, 32019994 - 32020069
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaata 195  Q
    ||||||||||||||||||||||||||| |||||| | |||| |||  |||  ||||||||| || |||| ||||||    
T  32019994 catgtgcaaatttgcacatgttaagaaatttaaaatggtaagtttgtcttggaacttgtgtattctatattaaata 32020069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 35151387 - 35151342
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttta 165  Q
    |||||||||||||||| ||||||| ||||||||| |||||| ||||    
T  35151387 catgtgcaaatttgcatatgttaaaaagtttaaaatagtaaattta 35151342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 12332505 - 12332429
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  12332505 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 12332429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 31613159 - 31613235
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  31613159 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 31613235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 31705097 - 31705021
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  31705097 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 31705021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Complemental strand, 40454229 - 40454153
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  40454229 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 40454153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 40513119 - 40513075
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||| |||||||||||||||||| || |||||| ||||||||||    
T  40513119 catgtacaaatttgcacatgttaaaaaatttaaaatagtaacttt 40513075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0727 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0727
Description:

Target: scaffold0727; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 5859 - 5759
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||  ||||||||||||||||||    
T  5859 catgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttaacttaaaatttgtattttttatattaaatatgtagtttttaatcaataattgtt 5760  T
Q  220 g 220  Q
    |    
T  5759 g 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 52789 - 52889
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| || |||||||||| |||||||||||||||||||    
T  52789 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattgtt 52888  T
Q  220 g 220  Q
    |    
T  52889 g 52889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 145845 - 145745
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  |||||||||||||| || |||||||||| |||||||||||||||||||    
T  145845 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttgacttggaacttgtgttttttgtattaaatatgtaacttttaatcaataattgtt 145746  T
Q  220 g 220  Q
    |    
T  145745 g 145745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Complemental strand, 13253 - 13153
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||  || |||||||||||||| |||||||||| ||||||||||| |||||||    
T  13253 catgtgcaaatttgcacatgttaagaagtttaaaatagtaactttaatttggaatttgtgttttttatattaaatatgtagcttttaatcaacaattgtt 13154  T
Q  220 g 220  Q
    |    
T  13153 g 13153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 33)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 2830691 - 2830791
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||| |||||||||||||||||||||||||||| || ||||||||| ||| || |||||||||||||| |||||||||| |||||||||||||||||||    
T  2830691 catgtacaaatttgcacatgttaagaagtttaaaataataactttaatttagaatttgtgttttttatattaaatatgtagcttttaatcaataattgtt 2830790  T
Q  220 g 220  Q
    |    
T  2830791 g 2830791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 31069592 - 31069692
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    ||||||||||||| |||||||||||||||||||| |||||||||| ||||  ||||||||||||||||| |||||||||| | |||||||||||||||||    
T  31069592 catgtgcaaatttacacatgttaagaagtttaaattagtaactttgacttggaacttgtgttttttatattaaatatgtaacatttaatcaataattgtt 31069691  T
Q  220 g 220  Q
    |    
T  31069692 g 31069692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 31568277 - 31568173
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||||||||||||||||||||| |||||||||||||||||||| | || ||||||||||||||||||||||||||||| ||||| |  || |||||||    
T  31568277 catgtgcaaatttgcacatgttaaaaagtttaaagtagtaactttgatttgaaacttgtgttttttataataaatatgtagcttttgaataaaaattgtt 31568178  T
Q  220 gattt 224  Q
    |||||    
T  31568177 gattt 31568173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 224
Target Start/End: Original strand, 22974603 - 22974687
Alignment:
Q  140 ttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttgattt 224  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  22974603 ttaagaagtttaaaatagtaactttaacttggaacttgtgttttttatattaaatatgtaacttttaatcaataattgttgattt 22974687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 140 - 224
Target Start/End: Complemental strand, 23813798 - 23813714
Alignment:
Q  140 ttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttgattt 224  Q
    |||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  23813798 ttaagaagtttaaaatagtaactttaacttggaacttgtgttttttatattaaatatgtaacttttaatcaataattgttgattt 23813714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 5362925 - 5363003
Alignment:
Q  142 aagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgttg 220  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||| |||||||||| ||||||||||| ||||||||    
T  5362925 aagaagtttaaagtagtaactttaacttggaacttgtgttttttatattaaatatgtagcttttaatcaacaattgttg 5363003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 1017788 - 1017889
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgt-atcttttaatcaataattgt 218  Q
    |||||| |||||| ||||||||||||||||||||||||||||||| |||| ||| |||||  ||||||| ||||||||| |  ||||||| |||||||||    
T  1017788 catgtgtaaatttacacatgttaagaagtttaaagtagtaactttgacttgaaagttgtgcattttatattaaatatgtaaatttttaataaataattgt 1017887  T
Q  219 tg 220  Q
    ||    
T  1017888 tg 1017889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 10887197 - 10887112
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||||||||||||||||||||||| |||| ||| | ||  ||||||||| ||||||| |||||||||| |||||    
T  10887197 catgtgcaaatttgcacatgttaagaagtttaaagtggtaattttgatttggaacttgtgtattttatattaaatatgtagctttt 10887112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 31169773 - 31169852
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||| ||||||||||||||||| || ||||||||||||||||| ||||  ||||||||  ||||||| ||||||||||    
T  31169773 catgtgtaaatttgcacatgttaacaaatttaaagtagtaactttgacttggaacttgtgcattttatattaaatatgta 31169852  T

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Target: chr6; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 121 - 196
Target Start/End: Complemental strand, 31503909 - 31503834
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    |||||||||||||||||||||||||| ||||||||||||| ||||  ||  ||||||||| ||||||| |||||||    
T  31503909 atgtgcaaatttgcacatgttaagaaatttaaagtagtaagtttatattggaacttgtgtattttatattaaatat 31503834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 169
Target Start/End: Complemental strand, 3853111 - 3853062
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaactt 169  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  3853111 catgtgcaaatttgcacatgttaagaaatttaaagtagtaactttgactt 3853062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 6017024 - 6016939
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||||||||||| ||||||||||| |||||||| ||||  ||||||||  ||| ||| ||||||| || |||||    
T  6017024 catgtgcaaatttgcacatgttaaaaagtttaaagtggtaactttgacttggaacttgtgcatttcatattaaatatataactttt 6016939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 17596509 - 17596430
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta 199  Q
    |||||||||||||| ||||| |||||||||||||||||||||||| | ||  ||||||||  ||||||| ||| ||||||    
T  17596509 catgtgcaaatttgtacatgataagaagtttaaagtagtaactttgatttggaacttgtgcattttatattaactatgta 17596430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 14228136 - 14228180
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  14228136 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 14228180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 28943779 - 28943823
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||    
T  28943779 catgtgcaaatttgcacatgttaagaaatttaaaatagtaacttt 28943823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 29863312 - 29863352
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  29863312 catgtgcaaatttgcacatgttaagaagtttaaaatagtaa 29863352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 20979140 - 20979107
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  20979140 catgtgcaaatttgcacatgttaagaagtttaaa 20979107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 27819637 - 27819722
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    ||||| |||||||||||||||||||||||||||| | |||  |||  |||||||||| |   ||||||| |||||||||| |||||    
T  27819637 catgtacaaatttgcacatgttaagaagtttaaaattgtatttttgtcttaaaacttattcattttatactaaatatgtaactttt 27819722  T

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Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 34692522 - 34692489
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||||||||||||||||||||||    
T  34692522 catgtgcaaatttgcacatgttaagaagtttaaa 34692489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 17552597 - 17552637
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    ||||||||||||||||||||||||||| |||||| ||||||    
T  17552597 catgtgcaaatttgcacatgttaagaaatttaaaatagtaa 17552637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 23936386 - 23936430
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||    
T  23936386 catgtgcaaatttgcacatgttaacaagtttaacatagtaacttt 23936430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 32614954 - 32614990
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagta 156  Q
    ||||| |||||||||||||||||||||||||||||||    
T  32614954 catgtacaaatttgcacatgttaagaagtttaaagta 32614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 120 - 155
Target Start/End: Original strand, 18332698 - 18332733
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagt 155  Q
    ||||||||||||| ||||||||||||||||||||||    
T  18332698 catgtgcaaattttcacatgttaagaagtttaaagt 18332733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 164
Target Start/End: Complemental strand, 33017891 - 33017848
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||||||||||||| || |||||| ||||||||||    
T  33017891 atgtgcaaatttgcacatgttaaaaaatttaaaatagtaacttt 33017848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 8977476 - 8977561
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||| |||||||||| |||||||||||| ||| |||||| |||   ||  ||||||||  ||||||| |||||||||| |||||    
T  8977476 catgtgtaaatttgcacttgttaagaagttcaaaatagtaaatttgtattgtaacttgtgcattttatattaaatatgtaactttt 8977561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Complemental strand, 13391843 - 13391810
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    ||||||||||||||| ||||||||||||||||||    
T  13391843 catgtgcaaatttgcgcatgttaagaagtttaaa 13391810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 17141443 - 17141358
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    |||||||||||||||| ||||||||| ||||||  |||||| |||  |||| ||||||    ||||||| |||||||||| |||||    
T  17141443 catgtgcaaatttgcatatgttaagatgtttaagatagtaattttgtcttagaacttgctcattttatattaaatatgtagctttt 17141358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 153
Target Start/End: Original strand, 24979159 - 24979192
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||||||||||| |||||||    
T  24979159 catgtgcaaatttgcacatgttaagatgtttaaa 24979192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 124 - 217
Target Start/End: Original strand, 28759028 - 28759121
Alignment:
Q  124 tgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattg 217  Q
    |||||||||||||||||||||||||||  | || |||||||   |||||| |||| | |||| || ||||| | || |||||||| ||||||||    
T  28759028 tgcaaatttgcacatgttaagaagttttgaataataactttgcattaaaagttgtatattttgtattaaatgtataacttttaataaataattg 28759121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 164
Target Start/End: Complemental strand, 3261246 - 3261202
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttt 164  Q
    ||||||||||||| |||||||||| ||||||||| ||| ||||||    
T  3261246 catgtgcaaatttacacatgttaaaaagtttaaaatagaaacttt 3261202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 29065435 - 29065475
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||||||| ||||||||||||| ||||||||| ||||||    
T  29065435 catgtgcaaacttgcacatgttaaaaagtttaaaatagtaa 29065475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 29120288 - 29120328
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    |||||||||| ||||||||||||| ||||||||| ||||||    
T  29120288 catgtgcaaacttgcacatgttaaaaagtttaaaatagtaa 29120328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 34733711 - 34733787
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||| |   ||||||||||| ||||  ||  ||||||||| ||||| | |||||||    
T  34733711 catgtgcaaatttgcacatgttaaggatactaaagtagtaagtttatattggaacttgtgtattttacattaaatat 34733787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 120 - 220
Target Start/End: Original strand, 3423 - 3523
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||| |||||||||||| ||||||||||||||||||| ||||||| ||  ||||| ||||||||||| |||||||||| |||||||||||||||||||    
T  3423 catgtgtaaatttgcacatattaagaagtttaaagtagttactttaaattggaacttatgttttttatattaaatatgtaacttttaatcaataattgtt 3522  T
Q  220 g 220  Q
    |    
T  3523 g 3523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 219
Target Start/End: Complemental strand, 182210 - 182112
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattgtt 219  Q
    |||||| ||||||| ||||||||||||||||||||||||| | || | || |||||||||||||||||| |||||||||| |||||||| ||||||||||    
T  182210 catgtgtaaatttgtacatgttaagaagtttaaagtagta-cgttgatttgaaacttgtgttttttatattaaatatgtaacttttaataaataattgtt 182112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 120 - 224
Target Start/End: Complemental strand, 43632 - 43526
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagttt--aaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatcttttaatcaataattg 217  Q
    |||||||||||||| | ||||||||||||||  |||| | ||||||||||||||||||| | ||||||||| ||||||| || |||||||| ||||||||    
T  43632 catgtgcaaatttgaatatgttaagaagtttttaaagcaataactttaacttaaaacttatattttttatattaaatatataacttttaattaataattg 43533  T
Q  218 ttgattt 224  Q
    |||||||    
T  43532 ttgattt 43526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 153
Target Start/End: Original strand, 191326 - 191358
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaa 153  Q
    |||||||||||||||||||||||||| ||||||    
T  191326 atgtgcaaatttgcacatgttaagaaatttaaa 191358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0618 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 120 - 225
Target Start/End: Original strand, 8424 - 8530
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgta-tcttttaatcaataattgt 218  Q
    |||||| ||||||||| |||||||||| ||||||||||||||||| | ||| ||||||||  ||||||| ||||| |||| | ||||||| |||||||||    
T  8424 catgtgtaaatttgcatatgttaagaaatttaaagtagtaactttgatttagaacttgtgcattttatattaaatttgtagttttttaataaataattgt 8523  T
Q  219 tgatttc 225  Q
    || ||||    
T  8524 tgttttc 8530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 205
Target Start/End: Original strand, 37124 - 37209
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatatgtatctttt 205  Q
    ||||||||||||||||||||||||||||||||||||  ||||||| ||||  ||||||||  ||| ||| |||||||||| |||||    
T  37124 catgtgcaaatttgcacatgttaagaagtttaaagtgataactttgacttggaacttgtgcatttcatattaaatatgtagctttt 37209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 196
Target Start/End: Original strand, 1453 - 1529
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaactttaacttaaaacttgtgttttttataataaatat 196  Q
    ||||||||||||||||||||||||||||||||||  ||||| |||| ||||||| ||||   ||||||| |||||||    
T  1453 catgtgcaaatttgcacatgttaagaagtttaaaagagtaattttatcttaaaatttgttcattttatattaaatat 1529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 120 - 156
Target Start/End: Original strand, 16545 - 16581
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagta 156  Q
    |||||||||||||||||||||||||||||||||||||    
T  16545 catgtgcaaatttgcacatgttaagaagtttaaagta 16581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 160
Target Start/End: Original strand, 13574 - 13613
Alignment:
Q  121 atgtgcaaatttgcacatgttaagaagtttaaagtagtaa 160  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  13574 atgtgcaaatttgcacatgttaagaagtttaaattagtaa 13613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 165
Target Start/End: Original strand, 94028 - 94073
Alignment:
Q  120 catgtgcaaatttgcacatgttaagaagtttaaagtagtaacttta 165  Q
    |||||||||||||||| |||||||||||||| || || ||||||||    
T  94028 catgtgcaaatttgcatatgttaagaagttttaaatactaacttta 94073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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