View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6698_low_86 (Length: 240)

Name: NF6698_low_86
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6698_low_86
NF6698_low_86
[»] chr8 (58 HSPs)
chr8 (18-240)||(10014885-10015107)
chr8 (18-220)||(30143088-30143301)
chr8 (18-231)||(43036158-43036382)
chr8 (18-226)||(15212526-15212745)
chr8 (18-221)||(33351895-33352109)
chr8 (18-104)||(6598845-6598931)
chr8 (18-104)||(6674298-6674384)
chr8 (18-236)||(4743412-4743632)
chr8 (18-96)||(3303879-3303957)
chr8 (18-95)||(4733691-4733768)
chr8 (18-221)||(12702847-12703062)
chr8 (18-229)||(4731395-4731617)
chr8 (18-104)||(41365056-41365142)
chr8 (18-95)||(17982535-17982612)
chr8 (18-95)||(31218139-31218216)
chr8 (18-95)||(42498076-42498153)
chr8 (26-104)||(10929674-10929751)
chr8 (23-104)||(1292677-1292758)
chr8 (103-240)||(3051459-3051596)
chr8 (18-95)||(1746427-1746504)
chr8 (18-95)||(19945569-19945646)
chr8 (18-91)||(27811164-27811237)
chr8 (18-95)||(44303736-44303813)
chr8 (18-93)||(1345580-1345655)
chr8 (29-221)||(34254548-34254751)
chr8 (18-95)||(5689153-5689230)
chr8 (18-95)||(34256714-34256790)
chr8 (102-221)||(5702121-5702240)
chr8 (18-96)||(4162381-4162459)
chr8 (21-95)||(19948533-19948607)
chr8 (18-94)||(18106287-18106363)
chr8 (168-236)||(42435579-42435647)
chr8 (102-217)||(23799221-23799336)
chr8 (22-95)||(2627624-2627698)
chr8 (21-95)||(18141702-18141776)
chr8 (21-95)||(29796535-29796609)
chr8 (35-95)||(40320949-40321009)
chr8 (18-74)||(41366823-41366879)
chr8 (177-236)||(4283058-4283117)
chr8 (21-88)||(8153650-8153717)
chr8 (169-231)||(4696259-4696321)
chr8 (168-228)||(19175367-19175427)
chr8 (35-95)||(30291474-30291534)
chr8 (170-221)||(1746590-1746641)
chr8 (178-220)||(17982399-17982441)
chr8 (174-236)||(1345745-1345809)
chr8 (169-218)||(11383536-11383585)
chr8 (169-221)||(19945710-19945762)
chr8 (169-229)||(40221283-40221343)
chr8 (169-236)||(27811028-27811095)
chr8 (170-221)||(34256876-34256927)
chr8 (178-221)||(42497960-42498003)
chr8 (178-220)||(31218003-31218045)
chr8 (18-82)||(7412581-7412646)
chr8 (169-229)||(4733562-4733622)
chr8 (18-74)||(5990362-5990417)
chr8 (18-95)||(9765629-9765708)
chr8 (170-218)||(19948693-19948741)
[»] chr5 (50 HSPs)
chr5 (18-236)||(13487933-13488162)
chr5 (18-236)||(42426444-42426673)
chr5 (18-226)||(13239492-13239711)
chr5 (18-104)||(31182846-31182932)
chr5 (18-104)||(5887625-5887711)
chr5 (20-95)||(28750866-28750941)
chr5 (18-104)||(16451954-16452040)
chr5 (44-219)||(16649857-16650044)
chr5 (18-95)||(39468758-39468835)
chr5 (18-96)||(3075867-3075945)
chr5 (18-221)||(32636569-32636783)
chr5 (18-91)||(533655-533728)
chr5 (18-95)||(36074253-36074330)
chr5 (102-228)||(12083812-12083937)
chr5 (18-236)||(19806136-19806343)
chr5 (22-95)||(537907-537980)
chr5 (18-95)||(13342943-13343020)
chr5 (18-95)||(25412644-25412721)
chr5 (18-95)||(30683129-30683206)
chr5 (18-95)||(42428639-42428716)
chr5 (18-104)||(8566155-8566242)
chr5 (20-95)||(30182471-30182546)
chr5 (18-97)||(33831560-33831639)
chr5 (18-96)||(42926774-42926852)
chr5 (18-95)||(42310144-42310221)
chr5 (102-233)||(11181459-11181592)
chr5 (102-228)||(14520567-14520692)
chr5 (102-226)||(11916608-11916732)
chr5 (167-226)||(36931986-36932045)
chr5 (168-226)||(5057571-5057629)
chr5 (22-95)||(9789429-9789503)
chr5 (22-95)||(16409364-16409438)
chr5 (134-228)||(16650958-16651052)
chr5 (22-95)||(18441853-18441927)
chr5 (22-95)||(26177772-26177846)
chr5 (169-226)||(535643-535700)
chr5 (168-231)||(27015049-27015112)
chr5 (22-95)||(26170663-26170737)
chr5 (168-218)||(38746535-38746585)
chr5 (175-229)||(39468909-39468963)
chr5 (178-221)||(25412507-25412550)
chr5 (178-221)||(30182333-30182376)
chr5 (178-221)||(37438891-37438934)
chr5 (168-226)||(9352971-9353029)
chr5 (168-220)||(31004796-31004848)
chr5 (181-221)||(36074427-36074467)
chr5 (102-197)||(533538-533632)
chr5 (178-221)||(13342806-13342849)
chr5 (102-151)||(535698-535746)
chr5 (102-151)||(42428735-42428783)
[»] chr3 (77 HSPs)
chr3 (18-221)||(40734243-40734457)
chr3 (18-221)||(29810613-29810827)
chr3 (18-236)||(29812793-29813022)
chr3 (18-104)||(39153570-39153656)
chr3 (18-96)||(32744635-32744713)
chr3 (18-104)||(9581156-9581242)
chr3 (18-104)||(19684098-19684184)
chr3 (18-104)||(22835211-22835297)
chr3 (18-95)||(5236665-5236742)
chr3 (19-95)||(7762148-7762224)
chr3 (21-104)||(760720-760803)
chr3 (18-95)||(5260532-5260609)
chr3 (23-104)||(26386695-26386776)
chr3 (18-95)||(40735265-40735342)
chr3 (18-107)||(51398684-51398773)
chr3 (101-229)||(24694788-24694916)
chr3 (18-102)||(29682234-29682318)
chr3 (102-221)||(47923534-47923653)
chr3 (18-104)||(16498903-16498989)
chr3 (18-95)||(7764350-7764427)
chr3 (18-95)||(37408341-37408418)
chr3 (18-95)||(45095047-45095124)
chr3 (102-220)||(1735935-1736053)
chr3 (102-228)||(8126967-8127093)
chr3 (18-104)||(32890976-32891062)
chr3 (102-228)||(36029430-36029556)
chr3 (18-95)||(5258353-5258430)
chr3 (18-107)||(53921712-53921801)
chr3 (18-95)||(9636335-9636413)
chr3 (103-229)||(40592404-40592530)
chr3 (101-220)||(8370121-8370239)
chr3 (102-221)||(25929026-25929145)
chr3 (102-221)||(30709427-30709546)
chr3 (18-95)||(23200345-23200423)
chr3 (102-228)||(39032179-39032304)
chr3 (35-96)||(29196627-29196688)
chr3 (21-89)||(9666680-9666748)
chr3 (22-95)||(800980-801054)
chr3 (102-228)||(16264686-16264811)
chr3 (18-95)||(23198146-23198224)
chr3 (102-228)||(48438552-48438678)
chr3 (174-231)||(46173250-46173307)
chr3 (147-236)||(55302532-55302621)
chr3 (168-228)||(21711604-21711664)
chr3 (168-236)||(54593216-54593284)
chr3 (20-95)||(5373105-5373180)
chr3 (178-221)||(7762009-7762052)
chr3 (133-220)||(40845021-40845108)
chr3 (174-236)||(4569463-4569525)
chr3 (178-220)||(7764198-7764240)
chr3 (106-228)||(23410639-23410760)
chr3 (172-226)||(27038448-27038502)
chr3 (168-226)||(37408199-37408257)
chr3 (105-226)||(33386301-33386421)
chr3 (136-221)||(40735174-40735259)
chr3 (39-95)||(2075300-2075355)
chr3 (101-221)||(27027042-27027161)
chr3 (35-95)||(44700718-44700778)
chr3 (170-221)||(9636500-9636551)
chr3 (169-236)||(49200040-49200107)
chr3 (144-226)||(5236803-5236885)
chr3 (169-231)||(31340631-31340693)
chr3 (169-231)||(34490749-34490811)
chr3 (168-226)||(37726077-37726135)
chr3 (168-226)||(43404321-43404379)
chr3 (18-52)||(44331470-44331504)
chr3 (168-221)||(6096188-6096241)
chr3 (169-226)||(27986102-27986159)
chr3 (155-236)||(43402365-43402446)
chr3 (191-228)||(44331307-44331344)
chr3 (102-218)||(27974586-27974701)
chr3 (169-226)||(53921855-53921914)
chr3 (178-221)||(45094909-45094952)
chr3 (168-226)||(27453359-27453417)
chr3 (30-93)||(6716391-6716456)
chr3 (30-93)||(6718575-6718640)
chr3 (18-82)||(39032335-39032399)
[»] chr7 (70 HSPs)
chr7 (18-236)||(47676345-47676574)
chr7 (18-231)||(18126379-18126603)
chr7 (18-221)||(1113401-1113616)
chr7 (18-240)||(6570319-6570553)
chr7 (18-226)||(26417053-26417275)
chr7 (18-217)||(4585910-4586120)
chr7 (18-236)||(2761511-2761740)
chr7 (18-218)||(14070042-14070253)
chr7 (18-218)||(14380070-14380281)
chr7 (18-104)||(38671431-38671517)
chr7 (102-236)||(33332076-33332210)
chr7 (18-95)||(43864126-43864203)
chr7 (18-95)||(48489313-48489390)
chr7 (18-236)||(47674152-47674381)
chr7 (18-96)||(496192-496270)
chr7 (18-95)||(19502060-19502137)
chr7 (18-95)||(24514969-24515046)
chr7 (18-95)||(48491461-48491538)
chr7 (18-221)||(23554785-23554999)
chr7 (18-104)||(25615736-25615822)
chr7 (18-108)||(29990924-29991014)
chr7 (18-95)||(4178657-4178734)
chr7 (18-95)||(31733178-31733255)
chr7 (102-231)||(46515939-46516067)
chr7 (102-226)||(4538855-4538979)
chr7 (102-236)||(2647323-2647457)
chr7 (18-104)||(31105602-31105688)
chr7 (18-95)||(4538749-4538826)
chr7 (30-95)||(30024953-30025018)
chr7 (18-96)||(24526106-24526184)
chr7 (18-95)||(39731258-39731336)
chr7 (18-96)||(41649219-41649296)
chr7 (18-95)||(35853797-35853874)
chr7 (102-221)||(49092026-49092146)
chr7 (21-95)||(4253742-4253816)
chr7 (102-228)||(21989245-21989370)
chr7 (18-95)||(48408684-48408762)
chr7 (35-96)||(12098098-12098159)
chr7 (35-95)||(41317673-41317733)
chr7 (21-92)||(23343859-23343930)
chr7 (102-228)||(21983580-21983705)
chr7 (22-104)||(31518668-31518750)
chr7 (21-87)||(36574728-36574794)
chr7 (178-221)||(19495716-19495759)
chr7 (174-236)||(27347653-27347715)
chr7 (46-96)||(36146659-36146709)
chr7 (168-226)||(44847762-44847820)
chr7 (181-226)||(2479751-2479796)
chr7 (169-226)||(43864001-43864058)
chr7 (178-221)||(4178520-4178563)
chr7 (170-221)||(24515132-24515183)
chr7 (21-95)||(23565274-23565346)
chr7 (22-95)||(43504360-43504434)
chr7 (154-231)||(6360486-6360563)
chr7 (168-221)||(48489175-48489228)
chr7 (102-221)||(79725-79845)
chr7 (35-95)||(8153211-8153271)
chr7 (169-240)||(496365-496436)
chr7 (169-228)||(2389812-2389871)
chr7 (178-221)||(35853658-35853701)
chr7 (168-231)||(48491313-48491376)
chr7 (101-231)||(4796300-4796430)
chr7 (18-95)||(5817048-5817126)
chr7 (154-236)||(32358410-32358492)
chr7 (168-226)||(47264045-47264103)
chr7 (178-211)||(3050523-3050556)
chr7 (18-82)||(9184965-9185030)
chr7 (18-82)||(2580631-2580695)
chr7 (102-150)||(2759084-2759131)
chr7 (191-231)||(30026393-30026432)
[»] chr1 (59 HSPs)
chr1 (21-236)||(49918079-49918305)
chr1 (20-218)||(28223632-28223841)
chr1 (18-226)||(31658978-31659197)
chr1 (20-218)||(28220437-28220646)
chr1 (18-217)||(10924972-10925182)
chr1 (18-229)||(3156604-3156825)
chr1 (18-104)||(197117-197203)
chr1 (18-104)||(3847330-3847416)
chr1 (18-101)||(834376-834459)
chr1 (18-240)||(46064644-46064877)
chr1 (18-218)||(1833270-1833481)
chr1 (18-95)||(3189213-3189290)
chr1 (18-95)||(3198030-3198107)
chr1 (18-95)||(3206869-3206946)
chr1 (102-229)||(4552952-4553079)
chr1 (18-96)||(13138183-13138261)
chr1 (102-228)||(13598737-13598863)
chr1 (18-96)||(15820188-15820266)
chr1 (18-95)||(20762554-20762631)
chr1 (18-95)||(44455042-44455119)
chr1 (21-96)||(928190-928265)
chr1 (18-236)||(30476657-30476886)
chr1 (18-104)||(8550996-8551082)
chr1 (18-104)||(13659545-13659631)
chr1 (18-96)||(23555474-23555552)
chr1 (18-95)||(13316527-13316604)
chr1 (102-221)||(29652150-29652269)
chr1 (102-228)||(37070104-37070230)
chr1 (18-96)||(40122407-40122485)
chr1 (18-95)||(37503763-37503840)
chr1 (18-95)||(37560078-37560155)
chr1 (18-96)||(45644564-45644642)
chr1 (18-95)||(50169419-50169496)
chr1 (102-228)||(3282044-3282169)
chr1 (148-233)||(16455379-16455464)
chr1 (18-94)||(4552846-4552922)
chr1 (35-95)||(50167414-50167474)
chr1 (169-236)||(29135780-29135847)
chr1 (102-228)||(21536205-21536330)
chr1 (18-95)||(51765277-51765354)
chr1 (35-95)||(777112-777172)
chr1 (35-95)||(28265793-28265852)
chr1 (168-226)||(13604259-13604317)
chr1 (168-220)||(3189097-3189150)
chr1 (168-220)||(3197914-3197967)
chr1 (168-220)||(3206732-3206785)
chr1 (147-231)||(37033636-37033720)
chr1 (174-221)||(13316694-13316741)
chr1 (168-217)||(13547677-13547726)
chr1 (168-217)||(13549588-13549637)
chr1 (183-220)||(15820053-15820090)
chr1 (154-239)||(22819819-22819904)
chr1 (21-81)||(43342468-43342528)
chr1 (169-231)||(11348236-11348298)
chr1 (102-160)||(37503859-37503916)
chr1 (195-228)||(16124294-16124327)
chr1 (21-82)||(27104193-27104254)
chr1 (176-220)||(193140-193184)
chr1 (168-236)||(44454889-44454957)
[»] chr4 (71 HSPs)
chr4 (18-231)||(37740361-37740585)
chr4 (20-226)||(34570625-34570842)
chr4 (18-236)||(54200115-54200344)
chr4 (102-236)||(25861659-25861793)
chr4 (18-95)||(5429561-5429638)
chr4 (18-95)||(48142924-48143001)
chr4 (18-95)||(52082866-52082943)
chr4 (18-104)||(5871693-5871779)
chr4 (18-104)||(13009640-13009726)
chr4 (102-236)||(36314856-36314990)
chr4 (102-236)||(36329065-36329199)
chr4 (18-95)||(9927666-9927743)
chr4 (18-95)||(12739759-12739836)
chr4 (18-95)||(12747965-12748042)
chr4 (21-239)||(24968837-24969067)
chr4 (18-95)||(52095571-52095648)
chr4 (18-95)||(56178845-56178922)
chr4 (21-104)||(47038621-47038704)
chr4 (18-217)||(29254243-29254453)
chr4 (27-95)||(52093882-52093950)
chr4 (102-228)||(5268834-5268960)
chr4 (18-95)||(26175845-26175922)
chr4 (18-95)||(30000014-30000091)
chr4 (103-219)||(38152081-38152197)
chr4 (102-228)||(8689131-8689256)
chr4 (18-95)||(13992494-13992572)
chr4 (21-95)||(52467567-52467641)
chr4 (102-231)||(6743046-6743175)
chr4 (18-95)||(12745645-12745722)
chr4 (18-95)||(36994407-36994483)
chr4 (102-221)||(16622935-16623053)
chr4 (105-236)||(54867519-54867650)
chr4 (18-96)||(3909988-3910066)
chr4 (18-95)||(5370295-5370372)
chr4 (35-96)||(46147581-46147642)
chr4 (168-228)||(5148080-5148140)
chr4 (35-95)||(45687422-45687482)
chr4 (168-231)||(27417539-27417602)
chr4 (168-231)||(41639082-41639145)
chr4 (102-218)||(16628517-16628632)
chr4 (21-81)||(48142591-48142651)
chr4 (168-236)||(50674434-50674502)
chr4 (178-221)||(52095740-52095783)
chr4 (168-226)||(26363787-26363845)
chr4 (22-95)||(31495522-31495596)
chr4 (169-219)||(39773981-39774031)
chr4 (104-197)||(35661978-35662070)
chr4 (168-221)||(52083027-52083080)
chr4 (168-221)||(52094034-52094087)
chr4 (168-236)||(6655468-6655536)
chr4 (169-221)||(12745787-12745839)
chr4 (35-95)||(37229962-37230022)
chr4 (168-236)||(40630496-40630564)
chr4 (169-221)||(46570115-46570167)
chr4 (169-240)||(3909823-3909893)
chr4 (102-228)||(5143597-5143723)
chr4 (178-228)||(3777961-3778011)
chr4 (21-91)||(5208055-5208125)
chr4 (168-226)||(9927831-9927889)
chr4 (21-95)||(21704040-21704114)
chr4 (46-96)||(36463639-36463689)
chr4 (169-226)||(5396327-5396384)
chr4 (174-226)||(5429420-5429472)
chr4 (21-84)||(6677360-6677424)
chr4 (169-229)||(54882559-54882619)
chr4 (21-92)||(6375960-6376030)
chr4 (18-82)||(6542390-6542455)
chr4 (102-160)||(26175941-26175998)
chr4 (18-64)||(31474063-31474109)
chr4 (102-151)||(12745741-12745789)
chr4 (21-92)||(39593971-39594044)
[»] chr2 (55 HSPs)
chr2 (18-229)||(36318218-36318440)
chr2 (18-104)||(11151800-11151886)
chr2 (18-104)||(14202616-14202702)
chr2 (18-104)||(42362225-42362311)
chr2 (18-104)||(11690374-11690460)
chr2 (18-95)||(39284767-39284844)
chr2 (18-97)||(723953-724032)
chr2 (18-221)||(2334626-2334840)
chr2 (22-221)||(36988288-36988498)
chr2 (18-104)||(14634035-14634121)
chr2 (18-104)||(34139980-34140066)
chr2 (17-91)||(38312126-38312200)
chr2 (18-95)||(45099637-45099714)
chr2 (102-236)||(20522559-20522693)
chr2 (18-95)||(4503341-4503418)
chr2 (18-95)||(5723463-5723540)
chr2 (18-166)||(17057578-17057737)
chr2 (18-166)||(17085561-17085720)
chr2 (18-95)||(33162659-33162736)
chr2 (22-95)||(36205876-36205949)
chr2 (101-236)||(33118471-33118606)
chr2 (102-228)||(33528258-33528384)
chr2 (102-228)||(34389188-34389313)
chr2 (18-95)||(6595215-6595292)
chr2 (18-95)||(4484539-4484617)
chr2 (102-236)||(21630282-21630416)
chr2 (18-95)||(29867751-29867828)
chr2 (124-228)||(39483235-39483339)
chr2 (102-228)||(23078106-23078231)
chr2 (35-95)||(36773431-36773491)
chr2 (21-95)||(12123797-12123871)
chr2 (168-226)||(28258814-28258872)
chr2 (18-95)||(30833227-30833305)
chr2 (102-226)||(2837149-2837272)
chr2 (170-221)||(5723626-5723677)
chr2 (102-221)||(8389790-8389909)
chr2 (101-220)||(10706895-10707013)
chr2 (177-228)||(17865589-17865640)
chr2 (22-95)||(32289454-32289528)
chr2 (102-231)||(14698640-14698769)
chr2 (35-95)||(11067174-11067234)
chr2 (106-221)||(13569671-13569785)
chr2 (173-240)||(40015314-40015381)
chr2 (18-55)||(24885583-24885620)
chr2 (45-97)||(7815523-7815574)
chr2 (39-95)||(11049419-11049474)
chr2 (102-166)||(38312040-38312103)
chr2 (170-221)||(4503504-4503555)
chr2 (178-221)||(45099500-45099543)
chr2 (18-95)||(8040305-8040385)
chr2 (18-82)||(17865446-17865511)
chr2 (174-231)||(35447477-35447534)
chr2 (102-151)||(39284700-39284748)
chr2 (23-95)||(41586328-41586401)
chr2 (18-82)||(40015166-40015230)
[»] chr6 (46 HSPs)
chr6 (102-238)||(21272613-21272749)
chr6 (18-104)||(28137617-28137703)
chr6 (18-221)||(33160562-33160777)
chr6 (18-95)||(9183240-9183317)
chr6 (18-95)||(33211394-33211471)
chr6 (101-233)||(24435601-24435733)
chr6 (18-104)||(16567079-16567165)
chr6 (18-104)||(26954494-26954580)
chr6 (102-221)||(5017137-5017256)
chr6 (18-104)||(16568916-16569002)
chr6 (102-228)||(18234420-18234546)
chr6 (18-95)||(5406407-5406484)
chr6 (18-95)||(5410732-5410809)
chr6 (18-95)||(5413601-5413678)
chr6 (18-95)||(31404882-31404960)
chr6 (18-95)||(16452538-16452615)
chr6 (18-95)||(30834745-30834822)
chr6 (102-221)||(31086114-31086234)
chr6 (104-236)||(31979851-31979988)
chr6 (169-240)||(26954674-26954745)
chr6 (18-95)||(2171739-2171817)
chr6 (102-228)||(10076825-10076951)
chr6 (169-236)||(9183381-9183448)
chr6 (103-226)||(22964037-22964159)
chr6 (103-226)||(23824234-23824356)
chr6 (178-221)||(5413828-5413871)
chr6 (178-221)||(16452820-16452863)
chr6 (22-95)||(3072965-3073039)
chr6 (170-220)||(5406570-5406620)
chr6 (170-220)||(5410895-5410945)
chr6 (168-226)||(5757115-5757173)
chr6 (35-96)||(3039142-3039202)
chr6 (178-218)||(5407288-5407328)
chr6 (178-218)||(5411613-5411653)
chr6 (181-221)||(16452712-16452752)
chr6 (169-236)||(5571890-5571957)
chr6 (170-221)||(30834909-30834960)
chr6 (170-221)||(31405046-31405097)
chr6 (169-226)||(23896736-23896793)
chr6 (191-227)||(26661470-26661506)
chr6 (191-227)||(26767441-26767477)
chr6 (191-226)||(3809320-3809355)
chr6 (22-95)||(6097645-6097720)
chr6 (30-95)||(411991-412057)
chr6 (18-82)||(5757269-5757334)
chr6 (192-220)||(21593194-21593222)
[»] scaffold0066 (1 HSPs)
scaffold0066 (18-217)||(20624-20834)
[»] scaffold0006 (4 HSPs)
scaffold0006 (102-228)||(6022-6148)
scaffold0006 (18-104)||(149306-149392)
scaffold0006 (102-226)||(2830-2954)
scaffold0006 (168-226)||(132916-132974)
[»] scaffold1519 (1 HSPs)
scaffold1519 (18-95)||(799-876)
[»] scaffold0002 (2 HSPs)
scaffold0002 (22-95)||(434415-434488)
scaffold0002 (178-221)||(434278-434321)
[»] scaffold0491 (2 HSPs)
scaffold0491 (18-95)||(8944-9022)
scaffold0491 (18-95)||(11370-11448)
[»] scaffold0016 (2 HSPs)
scaffold0016 (35-95)||(114472-114532)
scaffold0016 (178-221)||(114331-114374)
[»] scaffold0087 (2 HSPs)
scaffold0087 (168-226)||(43598-43656)
scaffold0087 (168-228)||(36467-36527)
[»] scaffold0014 (1 HSPs)
scaffold0014 (168-236)||(80871-80939)
[»] scaffold0140 (1 HSPs)
scaffold0140 (167-226)||(8054-8113)
[»] scaffold0286 (2 HSPs)
scaffold0286 (168-236)||(11070-11138)
scaffold0286 (41-95)||(22226-22280)
[»] scaffold0098 (1 HSPs)
scaffold0098 (168-226)||(45601-45659)
[»] scaffold0510 (1 HSPs)
scaffold0510 (178-226)||(1247-1295)
[»] scaffold0466 (1 HSPs)
scaffold0466 (168-228)||(6847-6907)
[»] scaffold0036 (1 HSPs)
scaffold0036 (102-160)||(86020-86078)


Alignment Details
Target: chr8 (Bit Score: 219; Significance: 1e-120; HSPs: 58)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 10015107 - 10014885
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaaaatctgcaaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10015107 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaaaatctgcaaa 10015008  T
Q  118 gaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttat 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10015007 gaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaatcgtgacacgattgatgcatacgacccaaggtacgaccaaccttat 10014908  T
Q  218 cctgtaaacgtgccaagcatgcc 240  Q
    |||||||||||||||||||||||    
T  10014907 cctgtaaacgtgccaagcatgcc 10014885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 18 - 220
Target Start/End: Complemental strand, 30143301 - 30143088
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tct-cttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||        ||||   ||| ||||    
T  30143301 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttc 30143202  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||| ||||| |||||||| ||| |||||||||||||||||||  |||||||  || | ||||| |||||||| ||| ||| |||||||||| ||||    
T  30143201 aaaatctacaaag-aacacttatatagcagtcttcagttgtcaaaatcgtgtcacgttttgccaaatcgtgacacggttggtgcgtacgacccaaagtac 30143103  T
Q  206 gaccaaccttatcct 220  Q
    |||||||||||||||    
T  30143102 gaccaaccttatcct 30143088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 43036382 - 43036158
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tctc-ttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||        ||||   |||| |||    
T  43036382 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaacctctcattc 43036283  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| ||||| |||||||||    
T  43036282 aaaatctgcaaag-aacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgatccaaggtac 43036184  T
Q  206 gaccaaccttatcctgtaaacgtgcc 231  Q
    || ||||||||||||| |||| ||||    
T  43036183 gatcaaccttatcctgaaaacttgcc 43036158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 15212745 - 15212526
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tct-cttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||        ||||   ||| ||||    
T  15212745 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcccaagtttctctctcttcaagctctccttc 15212646  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    |||||||| |||| |||||||| ||| |||||||||| ||||| ||  |||||||| ||    |||| |||||||| ||| ||| |||||||||||||||    
T  15212645 aaaatctgtaaag-aacacttatatagcagtcttcagctgtcacaatcgtgtcacattttcctaaatcgtgacacgtttggtgcgtacgacccaaggtac 15212547  T
Q  206 gaccaaccttatcctgtaaac 226  Q
    |||||||||||||||| ||||    
T  15212546 gaccaaccttatcctgaaaac 15212526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 33352109 - 33351895
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct------------cttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||   |||            ||||    
T  33352109 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttaccttctttgatttcccaagtttctctctcttccacctcaccttc 33352010  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||| |||||||||| ||||| ||| |||||||||| ||||||||  |||||||  ||   |||||  ||||||| ||| ||| || ||||||||||||    
T  33352009 aaaatttgcaaagaaa-acttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcatgacacgtttggtgcgtatgacccaaggtac 33351911  T
Q  206 gaccaaccttatcctg 221  Q
    ||||||||||||||||    
T  33351910 gaccaaccttatcctg 33351895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 6598931 - 6598845
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||||    
T  6598931 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagttttcctctctt 6598845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 6674384 - 6674298
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||| ||||||    
T  6674384 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagttttcctctctt 6674298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 4743412 - 4743632
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt-----------ca 106  Q
    ||||||||||||||||||||||||   |||||||||||||||||||| |||          ||||||||||||||||||| ||||||           ||    
T  4743412 tacaatgtttcccaacccaagagattcctaatcaaagaccctcaaccctaa----------tttgatttcccaagttttcctctcttgaaccacctttca 4743501  T
Q  107 aaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacg 206  Q
    ||||||||||||||||||||| ||| |||||||||  ||||||| | |||| ||  || | |||||||||||||| ||||||| ||||||||| ||||||    
T  4743502 aaatctgcaaagaaacacttatatagcagtcttcatctgtcaaatacgtgtgacgttttgccaaattgtgacacggttgatgcgtacgacccacggtacg 4743601  T
Q  207 accaaccttatcctg-taaacgtgccaagca 236  Q
    |||||||||||||||  ||||||||||||||    
T  4743602 accaaccttatcctgaaaaacgtgccaagca 4743632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 3303879 - 3303957
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    |||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  3303879 tacaatgtttcccaacccaagagaaccctaatcaaagaccctcaaccgtaaagttacctcctttgatttcccaagtttt 3303957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 4733768 - 4733691
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||    
T  4733768 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagttt 4733691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 12702847 - 12703062
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt--------tca---tctc-ttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||||||        |||   |||| |||    
T  12702847 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaatttacctcctttgatttcccaagtttctctctcttcaagctctccttc 12702946  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtc-aaattgtgacacgattgatgcatacgacccaaggta 204  Q
    ||||| ||||||||| |||||||||| || ||||||  ||||||||  |||||||  ||   | |||| ||||||||  || ||| |||||||||| |||    
T  12702947 aaaatatgcaaagaa-cacttacataacaatcttcaactgtcaaaatcgtgtcacgtttttcccaaatcgtgacacgtatggtgcgtacgacccaatgta 12703045  T
Q  205 cgaccaaccttatcctg 221  Q
    |||||||||||||||||    
T  12703046 cgaccaaccttatcctg 12703062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 229
Target Start/End: Complemental strand, 4731617 - 4731395
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct------------cttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  |||||||   |||            ||||    
T  4731617 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttttcaagtttctctctcttcaaccgctccttc 4731518  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||| ||||| |||||||| |||  ||||||||| | ||||||  |||||||  || | ||||| |||||||  ||| ||| |||| ||||||||||    
T  4731517 aaaatctacaaag-aacacttatatagtagtcttcagctatcaaaatcgtgtcacgttttgccaaatcgtgacacagttggtgcctacggcccaaggtac 4731419  T
Q  206 gaccaaccttatcctgtaaacgtg 229  Q
    |||||| ||||| ||| |||||||    
T  4731418 gaccaatcttattctgaaaacgtg 4731395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 41365056 - 41365142
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||| ||||||    
T  41365056 tacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcacaagttttcctctctt 41365142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 17982612 - 17982535
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  17982612 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagttt 17982535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 31218216 - 31218139
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  31218216 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagttt 31218139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 42498153 - 42498076
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  42498153 tacaacgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 42498076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 26 - 104
Target Start/End: Complemental strand, 10929751 - 10929674
Alignment:
Q  26 ttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||| ||||||    
T  10929751 ttcccaacccaagagaactctaatcaaagaccc-caaccctaaagttacctcctttgatttcccaagttttcctctctt 10929674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 1292677 - 1292758
Alignment:
Q  23 tgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||||||||| || |||||||| |||||||||| ||||||    
T  1292677 tgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaagttacctcatttgattttccaagttttcctctctt 1292758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 103 - 240
Target Start/End: Original strand, 3051459 - 3051596
Alignment:
Q  103 ttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaatt-gtgacacgattgatgcatacgacccaag 201  Q
    ||||||||||||| ||||||||||| |||  | ||| ||| | |||||| |||||||| ||||  |||||| ||| |||||||||||||||||||||||     
T  3051459 ttcaaaatctgcatagaaacacttatatagtactctgcagctatcaaaattgtgtcacgattgc-caaattcgtgtcacgattgatgcatacgacccaat 3051557  T
Q  202 gtacgaccaaccttatcctgtaaacgtgccaagcatgcc 240  Q
    ||||||||||||||||| || ||||||| ||| ||||||    
T  3051558 gtacgaccaaccttatcttgaaaacgtgtcaaacatgcc 3051596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 1746427 - 1746504
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||| | ||||||||||||||||||||    
T  1746427 tacaatgtttcccaaccaaagagaactctaatcaaggaccctaaaccctaaagttgcttcctttgatttcccaagttt 1746504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 19945569 - 19945646
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||| ||||||||||||||||||||||||| || |||| ||||||| | ||||||||||||||||||||    
T  19945569 tacaatgtttcccgacccaagagaactctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagttt 19945646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 27811237 - 27811164
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaa 91  Q
    |||||||||| |||||| ||||||||||||||||||||||||||||| |||| |||| ||||||||||||||||    
T  27811237 tacaatgttttccaacctaagagaactctaatcaaagaccctcaaccctaaatttacctcctttgatttcccaa 27811164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 44303813 - 44303736
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||   |||||||||||| |||||||    
T  44303813 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgtttcctttgatttctcaagttt 44303736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 93
Target Start/End: Original strand, 1345580 - 1345655
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagt 93  Q
    |||||| ||||||||| ||||||||||||||||||| |||||||||| ||||||||| ||||||||||| ||||||    
T  1345580 tacaatatttcccaactcaagagaactctaatcaaaaaccctcaaccctaaagttacatcctttgattttccaagt 1345655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 221
Target Start/End: Original strand, 34254548 - 34254751
Alignment:
Q  29 ccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt--------tca---tctc-ttcaaaatctgcaa 116  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||        |||   |||| ||||||||||||||    
T  34254548 ccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagtttctctctcttcaagctctccttcaaaatctgcaa 34254647  T
Q  117 agaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtca-aattgtgacacgattgatgcatacgacccaaggtacgaccaacctt 215  Q
    |||| |||||| ||| || |||||||  ||| |||  |||||||  ||   |  ||| ||| |||||||||||| |||||||||||||||||||||||||    
T  34254648 agaa-cacttatatagcaatcttcagc-gtcgaaatcgtgtcacgtttttccccaatcgtgccacgattgatgcgtacgacccaaggtacgaccaacctt 34254745  T
Q  216 atcctg 221  Q
    ||||||    
T  34254746 atcctg 34254751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 5689230 - 5689153
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||| ||| ||||||||| |||||||||||||||||||| ||||||||  |||||||||||||| |||||    
T  5689230 tacaatgtttccaaactcaagagaaccctaatcaaagaccctcaaccctaaagttatctcctttgatttccctagttt 5689153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 34256714 - 34256790
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||| ||||||||| ||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  34256714 tacaatgtttcc-aacccaagataactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagttt 34256790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 5702240 - 5702121
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  ||| |||  || | ||||| |||||||||||| ||| ||| | |||||    
T  5702240 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgacacgttttgccaaatcgtgacacgattggtgcgtacaatccaag 5702141  T
Q  202 gtacgaccaaccttatcctg 221  Q
    ||||||||||||||||||||    
T  5702140 gtacgaccaaccttatcctg 5702121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 4162459 - 4162381
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    |||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||| || ||| |||||  |||||||    
T  4162459 tacaatgttttccaacccaagagaaccctaatcaaagaccctcaaccctaaagttacctcttttaatttcttaagtttt 4162381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 19948533 - 19948607
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||| ||| |||||||||||||||||| || |||| ||||||| | ||||||||||||||||||||    
T  19948533 aatgtttcccaactcaaaagaactctaatcaaagactctaaaccctaaagttgcttcctttgatttcccaagttt 19948607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 18106287 - 18106363
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt 94  Q
    ||||||||||||||||||||||||| |||||| |||||||||| | | |||||||   |||||||||||||||||||    
T  18106287 tacaatgtttcccaacccaagagaaatctaattaaagaccctctatcctaaagttctctcctttgatttcccaagtt 18106363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 42435579 - 42435647
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||||||||    
T  42435579 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgccaagca 42435647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 102 - 217
Target Start/End: Complemental strand, 23799336 - 23799221
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    ||||||||| |||| |  |||||||| ||| |||||||||| ||||||||  |||||||  |||  ||||| ||||||| |||| ||| ||||||||||     
T  23799336 cttcaaaatatgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacaattggtgcgtacgacccaac 23799237  T
Q  202 gtacgaccaaccttat 217  Q
    ||||||||||||||||    
T  23799236 gtacgaccaaccttat 23799221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 2627698 - 2627624
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||| |||||||||||||| || |||| || ||||||  |||||||||||||||||||    
T  2627698 atgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 2627624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Complemental strand, 18141776 - 18141702
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||| |||||||| |||||||||||||||||||| |||| |||| ||||| ||||| || |||||    
T  18141776 aatgtttcccaacctaagagaaccctaatcaaagaccctcaaccctaaaattacctccttcgattttcctagttt 18141702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 29796535 - 29796609
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||| ||   |||||| |||||||| ||||||||| |||||||||||| |||||||    
T  29796535 aatgtttcccaacccaagagaaccctcgccaaagatcctcaaccctaaagttacctcctttgatttctcaagttt 29796609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 40321009 - 40320949
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||| ||||||||||||||||||||  |||||||| |||||||||||||| |||||    
T  40321009 caagagaaccctaatcaaagaccctcaacccgaaagttacctcctttgatttccctagttt 40320949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 74
Target Start/End: Original strand, 41366823 - 41366879
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttac 74  Q
    ||||||||||||||| | |||||||||||||||||||| |||||||| |||||||||    
T  41366823 tacaatgtttcccaatctaagagaactctaatcaaagatcctcaaccctaaagttac 41366879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 236
Target Start/End: Complemental strand, 4283117 - 4283058
Alignment:
Q  177 acacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||| |||| |||| ||||    
T  4283117 acacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaacttgcccagca 4283058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 8153717 - 8153650
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcc 88  Q
    ||||||||||||||||| |||||  ||||||||||| ||||||| |||| |||| |||||||||||||    
T  8153717 aatgtttcccaacccaaaagaacattaatcaaagactctcaaccttaaaattacctcctttgatttcc 8153650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 4696321 - 4696259
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    |||| ||| |||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||    
T  4696321 aaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcc 4696259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 19175427 - 19175367
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    ||||| ||| |||||||| ||||||||||||||||||  ||||||||||||||| ||||||    
T  19175427 caaatcgtggcacgattggtgcatacgacccaaggtataaccaaccttatcctgaaaacgt 19175367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 30291534 - 30291474
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||| ||||||||||||| |||||| ||||||||| ||||||||||| || |||||    
T  30291534 caagagaaccctaatcaaagaccatcaaccctaaagttacctcctttgattttcctagttt 30291474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 1746590 - 1746641
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||| ||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  1746590 aatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctg 1746641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 17982441 - 17982399
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcct 220  Q
    |||||||||||| ||||| ||||||||||||||||||||||||    
T  17982441 cacgattgatgcgtacgatccaaggtacgaccaaccttatcct 17982399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 174 - 236
Target Start/End: Original strand, 1345745 - 1345809
Alignment:
Q  174 gtgacacgattgatgcatacgacccaaggt--acgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||| | ||||||| |||||||||||||  |||||||||||||||||| ||||||| ||||||    
T  1345745 gtgacatggttgatgcgtacgacccaaggtgtacgaccaaccttatcctgaaaacgtgtcaagca 1345809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 218
Target Start/End: Complemental strand, 11383585 - 11383536
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatc 218  Q
    |||| |||||||| ||||||| |||||||||| |||||||||||||||||    
T  11383585 aaatcgtgacacggttgatgcgtacgacccaaagtacgaccaaccttatc 11383536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 19945710 - 19945762
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||| ||| |||||||||||| ||||| ||||||||||| |||||||||||||    
T  19945710 aaatcgtgccacgattgatgcgtacgatccaaggtacgatcaaccttatcctg 19945762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 40221343 - 40221283
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtg 229  Q
    |||| |||||||| ||| ||| |||||||||||| ||||| |||||||||||| |||||||    
T  40221343 aaatcgtgacacgtttggtgcgtacgacccaaggcacgacaaaccttatcctgaaaacgtg 40221283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 27811095 - 27811028
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||| |||||||| ||| ||| ||| ||||||| ||||||||||||||||||| |||| |||| ||||    
T  27811095 aaatcgtgacacgtttggtgcgtacaacccaagatacgaccaaccttatcctgaaaacttgcccagca 27811028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 34256876 - 34256927
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||| ||| |||||||||||| ||||||||||||||| ||||| |||||||||    
T  34256876 aatcgtgccacgattgatgcgtacgacccaaggtacaaccaatcttatcctg 34256927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 42498003 - 42497960
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| || ||||||||||||||| ||||||||||||    
T  42498003 cacgattgatgcgtaggacccaaggtacgactaaccttatcctg 42497960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 31218045 - 31218003
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcct 220  Q
    |||||||||||| || || ||||||||||||||||||||||||    
T  31218045 cacgattgatgcgtatgatccaaggtacgaccaaccttatcct 31218003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 7412581 - 7412646
Alignment:
Q  18 tacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccataaagttacgtcctttg 82  Q
    ||||||||||||||||||||||||  ||||   ||||||| ||||||| ||||||||| |||||||    
T  7412581 tacaatgtttcccaacccaagagatcctctctacaaagacactcaaccctaaagttacctcctttg 7412646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 4733622 - 4733562
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtg 229  Q
    |||| |||||||| ||| ||| |||||||||||||||||| |||  ||||||| |||||||    
T  4733622 aaatcgtgacacggttggtgcgtacgacccaaggtacgacaaactgtatcctgaaaacgtg 4733562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 74
Target Start/End: Complemental strand, 5990417 - 5990362
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttac 74  Q
    |||||||||||||||||||||||||| || |  |||||| ||||||| |||||||||    
T  5990417 tacaatgtttcccaacccaagagaac-ctcactaaagacactcaaccctaaagttac 5990362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 9765708 - 9765629
Alignment:
Q  18 tacaatgtttcccaaccc--aagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||  ||||||||   | |||||||| ||||||| | ||||||| |||||||  |||||||||||    
T  9765708 tacaatgtttcccaaccctcaagagaacctcactcaaagacactcaaccctcaagttacctcctttgtattcccaagttt 9765629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 218
Target Start/End: Original strand, 19948693 - 19948741
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatc 218  Q
    ||| ||| |||||||||||| ||||| ||||||||||||||| ||||||    
T  19948693 aatcgtgccacgattgatgcgtacgatccaaggtacgaccaaacttatc 19948741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 97; Significance: 8e-48; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 236
Target Start/End: Complemental strand, 13488162 - 13487933
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt-----tcatct-------cttc 105  Q
    |||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||     || |||       ||||    
T  13488162 tacaatgttttccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttctagctctccttc 13488063  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    |||||||||||| ||||||||| ||| |||||||||| |||||||| ||||||||  ||   ||||| |||||||| ||| ||| |||||||||||||||    
T  13488062 aaaatctgcaaa-aaacacttatataacagtcttcagctgtcaaaattgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtac 13487964  T
Q  206 gaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||| |||| |||| ||||    
T  13487963 gaccaaccttatcctgaaaacttgcccagca 13487933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 42426444 - 42426673
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaag--------ttttca---tct-cttc 105  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||        ||||||   ||| ||||    
T  42426444 tacaatgtttcccaatctaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctcttttcaagctctccttc 42426543  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||||||||| |||||||| ||||||||  ||   ||||| |||||| | ||| ||| |||||||||||||||    
T  42426544 aaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaattgtgtcacgttttcccaaatcgtgacatgtttggtgcgtacgacccaaggtac 42426642  T
Q  206 gaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||| |||| |||| ||||    
T  42426643 gaccaaccttatcctgaaaacttgcccagca 42426673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 13239711 - 13239492
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tct-cttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||        ||||   ||| ||||    
T  13239711 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacctcctttgattttctaagtttctctctcttcaaactctacttc 13239612  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaatt--ggtcaaattgtgacacgattgatgcatacgacccaaggt 203  Q
    ||||||||||||| |||||||| ||| ||||||||||  ||||||| ||||||||  ||    || ||| ||| |||||||||||| |||||||||||||    
T  13239611 aaaatctgcaaag-aacacttatatagcagtcttcag-cgtcaaaattgtgtcacgttttccatc-aatcgtgtcacgattgatgcgtacgacccaaggt 13239515  T
Q  204 acgaccaaccttatcctgtaaac 226  Q
    |||||||||||||||||| ||||    
T  13239514 acgaccaaccttatcctgaaaac 13239492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 31182932 - 31182846
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  31182932 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 31182846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 5887625 - 5887711
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  5887625 tacaatgtttcccaacccaagagaactctaatcaaataccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 5887711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 20 - 95
Target Start/End: Original strand, 28750866 - 28750941
Alignment:
Q  20 caatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  28750866 caatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 28750941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 16452040 - 16451954
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  16452040 tacaatgtttccgaacccaagagaactctaatcaaagatcctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 16451954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 44 - 219
Target Start/End: Original strand, 16649857 - 16650044
Alignment:
Q  44 tctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt------------caaaatctgcaaagaaacacttacata 131  Q
    |||||||||||||| |||||| ||||||||| |||||||||||||||||||||| ||||||            ||||||||||||||||||||||| |||    
T  16649857 tctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagttttcctctcttgaacctatcattcaaaatctgcaaagaaacacttatata 16649956  T
Q  132 tcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcc 219  Q
      |||||| || ||||||||   ||||||| || | ||||| |||||||| ||| ||| ||||| |||||||||||||||||||||||    
T  16649957 gtagtctttagctgtcaaaatcatgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcc 16650044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 39468758 - 39468835
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||    
T  39468758 tacaatgtttcccaacccaagagaactctaatgaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 39468835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 3075867 - 3075945
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||| |||||||    
T  3075867 tacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttccaaagtttt 3075945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 32636783 - 32636569
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct------------cttc 105  Q
    ||||||||||| | |||||||||||||||||||||||||||| |||| ||||||||| |||||||||||| |||||||   |||            ||||    
T  32636783 tacaatgtttcactacccaagagaactctaatcaaagacccttaaccctaaagttacctcctttgatttctcaagtttctctctctccaagctctccttc 32636684  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||| ||||| ||||||||   ||||||  ||   ||||| |||||||| ||| ||| || ||||||||||||    
T  32636683 aaaatctgcaaag-aacacttatatagcagttttcagctgtcaaaatcatgtcacgttttcccaaatcgtgacacgtttggtgcgtaagacccaaggtac 32636585  T
Q  206 gaccaaccttatcctg 221  Q
    ||||||||||||||||    
T  32636584 gaccaaccttatcctg 32636569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 533728 - 533655
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaa 91  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||||||||||||||||    
T  533728 tacaatgtttcccaacccaagagaactctaatcaaagacccccaaccctaaagttacctcctttgatttcccaa 533655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 36074253 - 36074330
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  36074253 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagttt 36074330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 12083937 - 12083812
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||  |||||||| ||||||||  ||   ||||| |||||||||||| |||||||||||||||    
T  12083937 cttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgttttc-caaatcgtgacacgattggtgcatacgacccaag 12083839  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  12083838 gtacgaccaaccttatcctgaaaacgt 12083812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 236
Target Start/End: Complemental strand, 19806343 - 19806136
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaaaatctgcaaa 117  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| | ||||| |   || |       |||| | ||    ||||||||||||||||    
T  19806343 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctcaagtttctctctctt------caagctctc----cttcaaaatctgcaaa 19806254  T
Q  118 gaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttat 217  Q
    ||| |||||| ||| |||||||||| ||||||||  |||||||  ||   ||| | |||||||| ||| ||| |||||||||||||||||||||||||||    
T  19806253 gaa-cacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaagtcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttat 19806155  T
Q  218 cctgtaaacgtgccaagca 236  Q
    |||  ||||||||| ||||    
T  19806154 cctaaaaacgtgcctagca 19806136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 537980 - 537907
Alignment:
Q  22 atgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  537980 atgtttcccaagccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttt 537907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 13343020 - 13342943
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||| ||||||| | ||||||||||||||||||||    
T  13343020 tacaatgtttcccaacccaagagaactctaatcagagaccctaaaccctaaagttgcttcctttgatttcccaagttt 13342943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 25412721 - 25412644
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| | ||||||||||||||||||||    
T  25412721 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaatgttgcctcctttgatttcccaagttt 25412644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 30683129 - 30683206
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||| |||| |||| |||| |||||||||||||||    
T  30683129 tacaatgtttcgcaacccaagagaactctaatcaaagaccctcaaccctaaaattacctcctctgatttcccaagttt 30683206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 42428639 - 42428716
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||||||    
T  42428639 tacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttatctcctttgatttcccaagttt 42428716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 8566155 - 8566242
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctca-accataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||| |||||||||||||||||||||||||||||||  || ||||||||| || ||||||||||||||||||| ||||||    
T  8566155 tacaatgtttccgaacccaagagaactctaatcaaagaccctcatgccctaaagttacctcatttgatttcccaagttttcctctctt 8566242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 30182546 - 30182471
Alignment:
Q  20 caatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||| | || ||||||| | ||||||||||||||||||||    
T  30182546 caatgtttcccaacccaagagaactctaatcaaagaccctaatccctaaagttgcttcctttgatttcccaagttt 30182471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 33831639 - 33831560
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttc 97  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| |||| |||  ||||||||||||||||||||||    
T  33831639 tacaatgttttccaacccaagagaactctaatcaaagacccttaaccctaaaattaactcctttgatttcccaagttttc 33831560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 42926852 - 42926774
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||||||| |||||||||||||||||||||||| |||| | ||||||||| || ||||||||||||||||||    
T  42926852 tacaatgtttcccaatccaagagaactctaatcaaagaccatcaatcctaaagttacctcatttgatttcccaagtttt 42926774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 42310144 - 42310221
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||| |||||| |||||||| ||||||||||||| | |||| ||||||||| ||||||||||||||||||||    
T  42310144 tacaatgttttccaaccaaagagaaccctaatcaaagaccataaaccctaaagttacctcctttgatttcccaagttt 42310221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 233
Target Start/End: Complemental strand, 11181592 - 11181459
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttca---gttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgaccc 198  Q
    |||||||| |||||||||| |||||| ||| |||||||||   | ||| ||||||||||||| ||||  |||||||||||||| ||||| | ||| ||||    
T  11181592 cttcaaaaactgcaaagaa-cacttatataacagtcttcatcagctgtaaaaaatgtgtcacgattgaccaaattgtgacacggttgatacgtacaaccc 11181494  T
Q  199 aaggtacgaccaaccttatcctgtaaacgtgccaa 233  Q
    | |||| ||||||||||||| |||| |||||||||    
T  11181493 acggtatgaccaaccttatcttgtatacgtgccaa 11181459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 14520567 - 14520692
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| |||  ||||| ||| ||||||||  |||||||  ||   ||||| ||||||||||| |||| |||||||||||    
T  14520567 cttcaaaatctgcacaagaacacttatataggagtctccagctgtcaaaatcgtgtcacgttttc-caaatcgtgacacgattaatgcgtacgacccaag 14520665  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  14520666 gtacgaccaaccttatcctgaaaacgt 14520692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 11916732 - 11916608
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||| ||||  ||||||||  |||||||  ||  |||||| |||| ||||||| ||| |||||||||||    
T  11916732 cttcaaaatctgcacaagaacacttatatagcagttttcaactgtcaaaatcgtgtcacgttttctcaaatcgtgatacgattggtgcgtacgacccaag 11916633  T
Q  202 gtacgaccaaccttatcctgtaaac 226  Q
    ||||||||||||| |||||| ||||    
T  11916632 gtacgaccaacctgatcctgaaaac 11916608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 36932045 - 36931986
Alignment:
Q  167 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||||||||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  36932045 tcaaattgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 36931986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 5057629 - 5057571
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||||||||||||| ||||||| ||||||| ||||||||||||||||||||||| ||||    
T  5057629 caaattgtgacacggttgatgcgtacgaccaaaggtacgaccaaccttatcctgaaaac 5057571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 9789429 - 9789503
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||| |||||||||||||| || |||| || ||||||  |||||||||||||||||||    
T  9789429 atgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 9789503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 16409438 - 16409364
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||| |||||||||||||| || |||| || ||||||  |||||||||||||||||||    
T  16409438 atgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 16409364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 228
Target Start/End: Original strand, 16650958 - 16651052
Alignment:
Q  134 agtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    |||||| || ||||||||  |||||||| || | ||||| |||||||| ||| ||| ||||| ||||||||||||||||||||||||| ||||||    
T  16650958 agtctttagctgtcaaaatcgtgtcacattttgccaaatcgtgacacggttggtgcgtacgatccaaggtacgaccaaccttatcctgaaaacgt 16651052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 18441853 - 18441927
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||| |||||||||||||| || |||| || ||||||  |||||||||||||||||||    
T  18441853 atgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 18441927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 26177846 - 26177772
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||| |||||||||||||| || |||| || ||||||  |||||||||||||||||||    
T  26177846 atgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 26177772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 535700 - 535643
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||| |||||||| ||| ||||||||||||||||||||||||||||||||||| ||||    
T  535700 aaatcgtgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctgaaaac 535643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 27015112 - 27015049
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| ||||    
T  27015112 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcc 27015049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 26170737 - 26170663
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||| || ||||||||||| || |||| || ||||||  |||||||||||||||||||    
T  26170737 atgtttcccaacccaagagaagctgtaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 26170663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 218
Target Start/End: Complemental strand, 38746585 - 38746535
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatc 218  Q
    |||||||||||||| ||| ||| ||||||||||||||||||||||||||||    
T  38746585 caaattgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatc 38746535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 229
Target Start/End: Original strand, 39468909 - 39468963
Alignment:
Q  175 tgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtg 229  Q
    ||||||| ||| ||||||||||||||||||||||||||||||||||  |||||||    
T  39468909 tgacacgtttggtgcatacgacccaaggtacgaccaaccttatcctaaaaacgtg 39468963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 25412550 - 25412507
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  25412550 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctg 25412507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 30182376 - 30182333
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  30182376 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctg 30182333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 37438934 - 37438891
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| |||||||||||||||||| ||||||||||||    
T  37438934 cacgattgatgcgtacgacccaaggtacgacaaaccttatcctg 37438891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 9353029 - 9352971
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| ||||||||||   ||||||||||||||||||||||||||||||| ||||    
T  9353029 caaatcgtgccacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaac 9352971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 31004848 - 31004796
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 220  Q
    ||||| |||||||||||| ||| |||||||||| |||| ||||||||||||||    
T  31004848 caaatcgtgacacgattggtgcgtacgacccaaagtacaaccaaccttatcct 31004796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 36074427 - 36074467
Alignment:
Q  181 gattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||||||||| ||||| |||||||||||||||||||||||||    
T  36074427 gattgatgcgtacgatccaaggtacgaccaaccttatcctg 36074467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 197
Target Start/End: Complemental strand, 533632 - 533538
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacc 197  Q
    |||||||||||||||| ||||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| |||||||    
T  533632 cttcaaaatctgcaaa-aaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacc 533538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 13342849 - 13342806
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| ||||| | |||||||||||||||||||||||    
T  13342849 cacgattgatgcgtacgatctaaggtacgaccaaccttatcctg 13342806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 535746 - 535698
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaa 151  Q
    ||||||||||||||||||| || ||| |||||||||||||| ||||||||    
T  535746 cttcaaaatctgcaaagaa-caattatatatcagtcttcagctgtcaaaa 535698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 42428735 - 42428783
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaa 151  Q
    ||||||||||||||||||| || ||| ||| |||||||||||||||||||    
T  42428735 cttcaaaatctgcaaagaa-catttatatagcagtcttcagttgtcaaaa 42428783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 8e-48; HSPs: 77)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 40734457 - 40734243
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt--------tca---tctc-ttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| ||||||||        |||   |||| |||    
T  40734457 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgattttccaagtttctgtctcttcaagctctccttc 40734358  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||||| |||||| ||| |||||||||| |||||||| ||||||||  |||  ||||| |||||||||||||||| ||||| |||||||||    
T  40734357 aaaatctgcaaagaa-cacttatatagcagtcttcagctgtcaaaattgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgatccaaggtac 40734259  T
Q  206 gaccaaccttatcctg 221  Q
    ||||||||||||||||    
T  40734258 gaccaaccttatcctg 40734243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 29810827 - 29810613
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt------------catctcttc 105  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||            | | |||||    
T  29810827 tacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagtttttctttcttcaaccttttcttc 29810728  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||| ||||||| |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| |||||||||||||||    
T  29810727 aaaatatgcaaag-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtac 29810629  T
Q  206 gaccaaccttatcctg 221  Q
    ||||||||||||||||    
T  29810628 gaccaaccttatcctg 29810613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 18 - 236
Target Start/End: Complemental strand, 29813022 - 29812793
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt-----tcatc-------tcttc 105  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||     || ||       |||||    
T  29813022 tacaatgcttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaacctcttcttc 29812923  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||| ||||| |||||||| ||| ||||||||||  |||||||  |||||||  ||   ||||| |||||||| ||| ||| |||||||||||||||    
T  29812922 aaaatctacaaag-aacacttatatagcagtcttcagcggtcaaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgacccaaggtac 29812824  T
Q  206 gaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||| |||| |||| ||||    
T  29812823 gaccaaccttatcctgaaaacttgcccagca 29812793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 39153570 - 39153656
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  39153570 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 39153656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 32744635 - 32744713
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  32744635 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 32744713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 9581242 - 9581156
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||| ||||||    
T  9581242 tacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctctt 9581156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 19684098 - 19684184
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||| ||||||    
T  19684098 tacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctctt 19684184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 22835211 - 22835297
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  22835211 tacaatgtttcccaacacaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttttcctctctt 22835297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5236665 - 5236742
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||||||||    
T  5236665 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctccttcgatttcccaagttt 5236742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 19 - 95
Target Start/End: Complemental strand, 7762224 - 7762148
Alignment:
Q  19 acaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  7762224 acaatatttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 7762148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Complemental strand, 760803 - 760720
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||| ||||||    
T  760803 aatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctctt 760720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5260532 - 5260609
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  5260532 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagttt 5260609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 23 - 104
Target Start/End: Original strand, 26386695 - 26386776
Alignment:
Q  23 tgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  26386695 tgtttcccaacctaagagaactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 26386776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 40735342 - 40735265
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  40735342 tacaatgtttcctaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 40735265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 107
Target Start/End: Complemental strand, 51398773 - 51398684
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaa 107  Q
    |||||| ||||||||||||||| |||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||  ||||||||||    
T  51398773 tacaatatttcccaacccaagaaaactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagtttctatctcttcaa 51398684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 101 - 229
Target Start/End: Complemental strand, 24694916 - 24694788
Alignment:
Q  101 tcttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 200  Q
    ||||||||||||||| |  |||||||| ||| |||||||||||||||||||  |||| ||  |||  ||||| |||||||||||| ||| ||| ||||||    
T  24694916 tcttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgttacgtttgtccaaatcgtgacacgattggtgcgtacaacccaa 24694817  T
Q  201 ggtacgaccaaccttatcctgtaaacgtg 229  Q
    ||||||||||||||||||||| |||||||    
T  24694816 ggtacgaccaaccttatcctgaaaacgtg 24694788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 102
Target Start/End: Complemental strand, 29682318 - 29682234
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctc 102  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||| |||  |||||||||||||||||||||| ||||    
T  29682318 tacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaatttaactcctttgatttcccaagttttcctctc 29682234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 47923653 - 47923534
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| || ||||||||||||||||  |||||||  |||  ||||| |||||||||||||||| ||| |||||||    
T  47923653 cttcaaaatctgcacaagaacacttatatagcactcttcagttgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacaacccaag 47923554  T
Q  202 gtacgaccaaccttatcctg 221  Q
    ||||||||||||||||||||    
T  47923553 gtacgaccaaccttatcctg 47923534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 16498989 - 16498903
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||| |||||||||    
T  16498989 tacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagttgtcatctctt 16498903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 7764427 - 7764350
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  7764427 tacaatgtttcctaacccaagagaaatctaatcaaagaccctcaactctaaagttacctcctttgatttcccaagttt 7764350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 37408418 - 37408341
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||| | |||| ||||||| | ||||||||||||||||||||    
T  37408418 tacaatgtttcccaacccaagagaactctaatcaaagaccataaaccctaaagttgcctcctttgatttcccaagttt 37408341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 45095124 - 45095047
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | || |||||||||||||||||    
T  45095124 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcctcttttgatttcccaagttt 45095047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 220
Target Start/End: Complemental strand, 1736053 - 1735935
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||| ||| |||||||    
T  1736053 cttcaaaatctgcataagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaag 1735954  T
Q  202 gtacgaccaaccttatcct 220  Q
    |||||||||||||||||||    
T  1735953 gtacgaccaaccttatcct 1735935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 8126967 - 8127093
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||||| ||||||||| ||| |||||||||  ||||||||  |||||||  |||  ||||| |||||||| ||| ||  |||||||||||    
T  8126967 cttcaaaatctgcaaataaacacttatatagcagtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacggttggtgtgtacgacccaag 8127066  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
     ||||||||||||||||||| ||||||    
T  8127067 atacgaccaaccttatcctgaaaacgt 8127093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 32891062 - 32890976
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||| || |||| ||||| ||||||    
T  32891062 tacaatgtttcccaccccaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgactttccaaattttcctctctt 32890976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 36029430 - 36029556
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| |||||||| ||||||||  ||    |||  |||||||||||| ||| |||||||||||    
T  36029430 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaattgtgtcacgtttttctaaaccgtgacacgattggtgcgtacgacccaag 36029529  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  36029530 gtacgaccaaccttatcctgaaaacgt 36029556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5258353 - 5258430
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |  ||||||||||| |||||||    
T  5258353 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagtttctccctttgatttctcaagttt 5258430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 107
Target Start/End: Original strand, 53921712 - 53921801
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaa 107  Q
    |||||||||| ||||||||||| ||| |||||||||||| ||||||| ||||||||| || ||||||||||||||||||  |||||||||    
T  53921712 tacaatgttttccaacccaagaaaaccctaatcaaagactctcaaccctaaagttacctcatttgatttcccaagtttttctctcttcaa 53921801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 9636335 - 9636413
Alignment:
Q  18 tacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||| ||||||||||||||||| |||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  9636335 tacaatatttcccaacccaagagagactctaatcaaagaccctaaaccctaaagtttcttcctttgatttcccaagttt 9636413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 229
Target Start/End: Complemental strand, 40592530 - 40592404
Alignment:
Q  103 ttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaagg 202  Q
    ||||||||||||| |  |||||||| ||| | |||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||  ||||| ||||||    
T  40592530 ttcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgatccaagg 40592431  T
Q  203 tacgaccaaccttatcctgtaaacgtg 229  Q
    ||||||||||||||||||| |||||||    
T  40592430 tacgaccaaccttatcctgaaaacgtg 40592404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 8370239 - 8370121
Alignment:
Q  101 tcttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 200  Q
    ||||||||||||||| |  ||| |||| ||| |||||||||||||||||||  |||||||  ||   ||||| |||||||||||| ||| ||| ||||||    
T  8370239 tcttcaaaatctgcacaagaacgcttatatagcagtcttcagttgtcaaaatcgtgtcacgttttc-caaatcgtgacacgattggtgcgtacaacccaa 8370141  T
Q  201 ggtacgaccaaccttatcct 220  Q
    ||||||||||||||||||||    
T  8370140 ggtacgaccaaccttatcct 8370121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 25929145 - 25929026
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    ||||||||||| |||||||||||||| |||  | ||||||| ||||||||  ||||||| ||||| ||||| || ||||| ||| | | ||||| ||||     
T  25929145 cttcaaaatctacaaagaaacacttatatagaaatcttcagctgtcaaaatcgtgtcacgattggccaaatcgtaacacggttggtacgtacgatccaat 25929046  T
Q  202 gtacgaccaaccttatcctg 221  Q
    ||||||||||||||||||||    
T  25929045 gtacgaccaaccttatcctg 25929026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 30709546 - 30709427
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||||||| ||| |||||||||||    
T  30709546 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttccaaatcgtgacacgattggtgcgtacgacccaag 30709447  T
Q  202 gtacgaccaaccttatcctg 221  Q
    ||| |||||| |||||||||    
T  30709446 gtaagaccaatcttatcctg 30709427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 23200345 - 23200423
Alignment:
Q  18 tacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| || |||| |  |||||||||||||||||||    
T  23200345 tacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagttt 23200423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 39032304 - 39032179
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||| ||||| |  |||||||| ||| || ||||||| ||||||||  ||||||| |||  |||||| ||| |||||||| ||| |||||||||||    
T  39032304 cttcaaaaactgcacaagaacacttatatagcaatcttcagctgtcaaaatcgtgtcacgattt-tcaaatcgtggcacgattggtgcgtacgacccaag 39032206  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    ||||||||||| |||||||| ||||||    
T  39032205 gtacgaccaactttatcctgaaaacgt 39032179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 29196627 - 29196688
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  29196627 caagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 29196688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 21 - 89
Target Start/End: Original strand, 9666680 - 9666748
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttccc 89  Q
    |||||||||||||  |||||||| |||||||||||||||||||| ||||||||| || |||||||||||    
T  9666680 aatgtttcccaactgaagagaaccctaatcaaagaccctcaaccctaaagttacctcatttgatttccc 9666748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 801054 - 800980
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||| |||||||||||||| || |||| || |||| | ||||||||||||||||||||    
T  801054 atgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagtttcttcctttgatttcccaagttt 800980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 16264686 - 16264811
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||| ||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| ||| |||||||| ||| ||| |||||||    
T  16264686 cttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgctttc-caaatcgtggcacgattggtgcgtaccacccaag 16264784  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  16264785 gtacgaccaaccttatcctgaaaacgt 16264811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 23198146 - 23198224
Alignment:
Q  18 tacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| || |||| |  |||||||||| ||||||||    
T  23198146 tacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgattttccaagttt 23198224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 48438552 - 48438678
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    ||||||||| |||| |  |||||||| ||| |||||||| | ||| ||||  |||||||  |||  ||||| |||||||||||| ||| ||||| |||||    
T  48438552 cttcaaaatttgcacaagaacacttatatagcagtcttcggctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaag 48438651  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||| ||||||||||||||| ||||||    
T  48438652 gtacaaccaaccttatcctgaaaacgt 48438678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 174 - 231
Target Start/End: Complemental strand, 46173307 - 46173250
Alignment:
Q  174 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||||||||    
T  46173307 gtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcc 46173250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 147 - 236
Target Start/End: Original strand, 55302532 - 55302621
Alignment:
Q  147 caaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||| |||||||| |||   ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||    
T  55302532 caaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagca 55302621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 21711604 - 21711664
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||| | ||||||    
T  21711604 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatccggaaaacgt 21711664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 54593284 - 54593216
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||| |||||||| ||| ||| |||||||||| |||||||||||||||||||| ||||||||| ||||    
T  54593284 caaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacgtgcccagca 54593216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 95
Target Start/End: Complemental strand, 5373180 - 5373105
Alignment:
Q  20 caatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||  | | ||||||| ||||||| ||||||||| |||||||||||  |||||||    
T  5373180 caatgtttcccaacccaagagaaccttcaccaaagactctcaaccttaaagttacctcctttgatttttcaagttt 5373105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 7762052 - 7762009
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  7762052 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctg 7762009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 220
Target Start/End: Original strand, 40845021 - 40845108
Alignment:
Q  133 cagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 220  Q
    |||||||||| | || ||| ||||||||  |||  ||||| |||||||||||| ||| ||| ||||||||||||||||||||||||||    
T  40845021 cagtcttcagctatctaaattgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacaacccaaggtacgaccaaccttatcct 40845108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 4569525 - 4569463
Alignment:
Q  174 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||    
T  4569525 gtgacacggttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagca 4569463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 178 - 220
Target Start/End: Complemental strand, 7764240 - 7764198
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcct 220  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  7764240 cacgattgatgcgtacgacccaaggtacgaccaaccttatcct 7764198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 228
Target Start/End: Original strand, 23410639 - 23410760
Alignment:
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    |||| ||||||||||||||||| ||| |||||||||| |||| ||| ||||||||  || | ||||| |||||||| ||| ||   || |||||||||||    
T  23410639 aaaaactgcaaagaaacacttatatagcagtcttcagctgtc-aaattgtgtcacgttttgccaaatcgtgacacggttggtgtgaacaacccaaggtac 23410737  T
Q  206 gaccaaccttatcctgtaaacgt 228  Q
    |||||| |||||| || ||||||    
T  23410738 gaccaaacttatcttgaaaacgt 23410760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 172 - 226
Target Start/End: Original strand, 27038448 - 27038502
Alignment:
Q  172 ttgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| |||||||| ||| ||||||||||||||||||||||||||||||| ||||    
T  27038448 ttgtggcacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaac 27038502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 37408257 - 37408199
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  37408257 caaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 37408199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 105 - 226
Target Start/End: Complemental strand, 33386421 - 33386301
Alignment:
Q  105 caaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggta 204  Q
    ||||||||||| |  |||||||| ||| |||||||||| ||  ||||  ||| |||||||   ||||| ||| |||||||||| | ||||||||||| ||    
T  33386421 caaaatctgcacaagaacacttaaataccagtcttcagctgataaaatcgtgccacaatttc-caaatcgtgtcacgattgatacgtacgacccaagata 33386323  T
Q  205 cgaccaaccttatcctgtaaac 226  Q
    ||||||||||||||||| ||||    
T  33386322 cgaccaaccttatcctgaaaac 33386301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 136 - 221
Target Start/End: Complemental strand, 40735259 - 40735174
Alignment:
Q  136 tcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||||||| ||||||||  |||||||  |||  |||||  | ||||||||| ||| |||||||||||||||||||||||||||||||    
T  40735259 tcttcagctgtcaaaatcgtgtcacgtttgtccaaatcataacacgattggtgcgtacgacccaaggtacgaccaaccttatcctg 40735174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 39 - 95
Target Start/End: Original strand, 2075300 - 2075355
Alignment:
Q  39 agaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||| ||||||| ||||||||| || |||||||||||||||||    
T  2075300 agaactctaatcaaagactctcaaccctaaagttac-tcatttgatttcccaagttt 2075355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 27027042 - 27027161
Alignment:
Q  101 tcttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 200  Q
    ||||||||||||||| |  |  ||||| ||| |||||||||| ||||||||  |||||||  ||   ||||  ||| |||||||| ||| ||||||||||    
T  27027042 tcttcaaaatctgcacaagattacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttc-caaaacgtggcacgattggtgcgtacgacccaa 27027140  T
Q  201 ggtacgaccaaccttatcctg 221  Q
    |||||||||||||||||||||    
T  27027141 ggtacgaccaaccttatcctg 27027161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 44700718 - 44700778
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||| ||| ||||||||||||| |||||| ||||||||| |||||||||||||| |||||    
T  44700718 caagataaccctaatcaaagaccatcaaccctaaagttacctcctttgatttccctagttt 44700778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 9636500 - 9636551
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||| ||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  9636500 aatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctg 9636551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 49200040 - 49200107
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||| |||||||  ||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||    
T  49200040 aaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacatgcccagca 49200107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 144 - 226
Target Start/End: Original strand, 5236803 - 5236885
Alignment:
Q  144 tgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||||||  |||||||  || | ||||| |||||||| ||| ||| ||||||||||||||||||||| ||||||||| ||||    
T  5236803 tgtcaaaatcgtgtcacgttttgccaaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaacttatcctgaaaac 5236885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 231
Target Start/End: Original strand, 31340631 - 31340693
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    |||| ||| |||| ||| ||| ||||||||||||||||||||||||||||||| |||| ||||    
T  31340631 aaatcgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcc 31340693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 34490811 - 34490749
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    |||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| |||| ||||    
T  34490811 aaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgcc 34490749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 37726077 - 37726135
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| |||||||||| | |||||||||| |||||||||||||||||||| ||||    
T  37726077 caaatcgtgtcacgattgatacgtacgacccaatgtacgaccaaccttatcctgaaaac 37726135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 43404321 - 43404379
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||| ||||||||||| ||||    
T  43404321 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccgaccttatcctgaaaac 43404379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 44331504 - 44331470
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaa 52  Q
    |||||||||||||||||||||||||||||||||||    
T  44331504 tacaatgtttcccaacccaagagaactctaatcaa 44331470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 6096188 - 6096241
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||||| |||||||  ||| ||| |||||||||||||||||||||||||||||||    
T  6096188 caaatcgtgacacatttggtgcgtacgacccaaggtacgaccaaccttatcctg 6096241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 27986159 - 27986102
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||| ||| |||||||||| | ||||||||||| ||||||||||||||||||| ||||    
T  27986159 aaatcgtgtcacgattgatacgtacgacccaagatacgaccaaccttatcctgaaaac 27986102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 43402365 - 43402446
Alignment:
Q  155 tgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||||||||   ||||| |||||||| ||| ||| ||||||||||| ||| ||||||||||||||| |||| |||| ||||    
T  43402365 tgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacaaccaaccttatcctgaaaacttgcccagca 43402446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 191 - 228
Target Start/End: Complemental strand, 44331344 - 44331307
Alignment:
Q  191 tacgacccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  44331344 tacgacccaaggtacgaccaaccttatcctgaaaacgt 44331307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 27974701 - 27974586
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||  ||||  ||| |||||||   |||||  || |||||||||| | |||||||||||    
T  27974701 cttcaaaatctgcacaagaacacttatataacagtcttcagctgataaaatcgtgccacaatttc-caaatcatgtcacgattgatacgtacgacccaag 27974603  T
Q  202 gtacgaccaaccttatc 218  Q
    |||| ||||||||||||    
T  27974602 gtacaaccaaccttatc 27974586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 53921855 - 53921914
Alignment:
Q  169 aaattgtgacacgattgatgc--atacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||| ||| ||||||||||||  ||||||| |||||||||||||||||||||||| ||||    
T  53921855 aaatcgtgtcacgattgatgcgcatacgactcaaggtacgaccaaccttatcctgaaaac 53921914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 45094952 - 45094909
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| ||||  |||||||||||||||||||||||||    
T  45094952 cacgattgatgcgtacgttccaaggtacgaccaaccttatcctg 45094909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 27453359 - 27453417
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| |||||||||| | |||| | |||||||||||||||||||||||| ||||    
T  27453359 caaatcgtgtcacgattgatacgtacgtcacaaggtacgaccaaccttatcctgaaaac 27453417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 6716456 - 6716391
Alignment:
Q  30 caacccaagaga-actctaatcaaaga-ccctcaaccataaagttacgtcctttgatttcccaagt 93  Q
    |||||||||||| |||||||||||||| |||| |||| || ||||||  |||||||||||||||||    
T  6716456 caacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagt 6716391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 93
Target Start/End: Complemental strand, 6718640 - 6718575
Alignment:
Q  30 caacccaagaga-actctaatcaaaga-ccctcaaccataaagttacgtcctttgatttcccaagt 93  Q
    |||||||||||| |||||||||||||| |||| |||| || ||||||  |||||||||||||||||    
T  6718640 caacccaagagatactctaatcaaagaaccctaaaccctagagttactccctttgatttcccaagt 6718575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 39032399 - 39032335
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttg 82  Q
    |||||||||| ||||||||||||| |||    ||||||| ||||||| ||||||||| |||||||    
T  39032399 tacaatgtttaccaacccaagagatctcactacaaagacactcaaccctaaagttacctcctttg 39032335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 93; Significance: 2e-45; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 47676345 - 47676574
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca----tctcttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||        ||||     ||||||    
T  47676345 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttatctcctttgatttcccaagtttctctctcttcaagctcctcttc 47676444  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| |||||||||||||  |||||||| ||||||||  ||    |||| |||||||| ||| ||| |||||||||||||||    
T  47676445 aaaatctgcaaag-aacacttatatatcagtcttcaactgtcaaaattgtgtcacgttttccaaaatcgtgacacgtttggtgcgtacgacccaaggtac 47676543  T
Q  206 gaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||| |||| |||| ||||    
T  47676544 gaccaaccttatcctgaaaacttgcccagca 47676574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 18126603 - 18126379
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tc-tcttc 105  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||        ||||   || |||||    
T  18126603 tacaatgtttcccaacccatgagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctattcaagctcttcttc 18126504  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||||||||||| || ||||||||  |||||||  ||  |||||| |||||||| ||| ||| |||||||||||||||    
T  18126503 aaaatctgcaaag-aacacttatatatcagtctttagctgtcaaaatcgtgtcacgttttctcaaatcgtgacacgtttggtgcgtacgacccaaggtac 18126405  T
Q  206 gaccaaccttatcctgtaaacgtgcc 231  Q
    ||||||| |||||||| |||| ||||    
T  18126404 gaccaacattatcctgaaaacttgcc 18126379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 1113616 - 1113401
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt-----tcatc-------tcttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||     || ||       |||||    
T  1113616 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacttcctttgatttcccaagtttctctctcttcaacctcttcttc 1113517  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    |||||||||| ||||||||||| ||| |||| ||||| ||||||||  |||||||  || | |||   |||||||| ||| ||| |||||||||||||||    
T  1113516 aaaatctgcacagaaacacttatataacagtattcagctgtcaaaatcgtgtcacgttttgccaatacgtgacacgtttggtgcgtacgacccaaggtac 1113417  T
Q  206 gaccaaccttatcctg 221  Q
    ||||||||||||||||    
T  1113416 gaccaaccttatcctg 1113401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 6570553 - 6570319
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt------------c 105  Q
    |||||||||||||| ||||||||||| ||| |||||||| ||||| | ||||||||| |||||||||||| |||||||||  |||||            |    
T  6570553 tacaatgtttcccaccccaagagaaccctagtcaaagacactcaatcctaaagttacctcctttgatttctcaagttttcccctctttaagctctccttc 6570454  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||| |||||||||||||||| | |  ||| ||||||||||||||| ||||||| ||||| ||||| |||||||| ||||||| || ||||||||||||    
T  6570453 aaaatatgcaaagaaacacttaaacaatagttttcagttgtcaaaaacgtgtcacgattggccaaatcgtgacacggttgatgcgtatgacccaaggtac 6570354  T
Q  206 gaccaaccttatcctgtaaacgtgccaagcatgcc 240  Q
    || ||||||||||||  ||||||| ||||||||||    
T  6570353 gatcaaccttatcctaaaaacgtgtcaagcatgcc 6570319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 26417275 - 26417053
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt---tcatc-------tcttcaa 107  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||   || ||       |||||||    
T  26417275 tacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagtttatctcttcaagctcttcttcaa 26417176  T
Q  108 aatctgcaaaga----aacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggt 203  Q
    ||||||||||||    |||||||| ||| |||||||||   |||||||  ||||||| ||||| ||||| |||||||| ||| ||| |||||||||||||    
T  26417175 aatctgcaaagaaattaacacttatatagcagtcttcaaccgtcaaaatcgtgtcacgattggccaaatcgtgacacggttggtgcgtacgacccaaggt 26417076  T
Q  204 acgaccaaccttatcctgtaaac 226  Q
    ||||||||||||| |||| ||||    
T  26417075 acgaccaaccttaccctgaaaac 26417053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 4586120 - 4585910
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct------------cttc 105  Q
    |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||||||||||  |||            ||||    
T  4586120 tacaatgtttcccaacccaagagaactctaatcaaagagcctcaaccctaaagttacatcctttgatttcccaagtttttctctcttctaactctccttc 4586021  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| ||||||| || ||||||||  |||||||| ||   ||||| |||||| | ||| ||| |||||||||||||||    
T  4586020 aaaatctgcaaag-aacacttatataacagtctttagctgtcaaaatcgtgtcacattttcccaaatcgtgacatgtttggtgcgtacgacccaaggtac 4585922  T
Q  206 gaccaaccttat 217  Q
    ||||||||||||    
T  4585921 gaccaaccttat 4585910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 2761511 - 2761740
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tct-cttc 105  Q
    |||||||||||||||||||||||||||||||||||| | | |||||| ||||||||| |||||||||||||||||||        ||||   ||| ||||    
T  2761511 tacaatgtttcccaacccaagagaactctaatcaaatatcatcaaccctaaagttacctcctttgatttcccaagtttatctctcttcaagctctccttc 2761610  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| |||||||||||||||    
T  2761611 aaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtac 2761709  T
Q  206 gaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||| ||||||||| |||| |||| ||||    
T  2761710 gaccaatcttatcctgaaaacttgcccagca 2761740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 14070042 - 14070253
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctcttc------------ 105  Q
    ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||   |||||||                
T  14070042 tacaatgttacccaacccaagagaactctaatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttctctctcttcaagccctccttt 14070141  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    |||||| |||||| |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| |||||||||||||||||||    
T  14070142 aaaatcggcaaag-aacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtac 14070240  T
Q  206 gaccaaccttatc 218  Q
    |||||||||||||    
T  14070241 gaccaaccttatc 14070253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 218
Target Start/End: Original strand, 14380070 - 14380281
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctcttc------------ 105  Q
    ||||||||| |||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||||   |||||||                
T  14380070 tacaatgttacccaacccaagagaactctaatcaaagaccctcagccctaaagttacctcctttgatttcccaagtttctctctcttcaagccctccttt 14380169  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    |||||| |||||| |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| |||||||||||||||||||    
T  14380170 aaaatcggcaaag-aacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcatacgacccaaggtac 14380268  T
Q  206 gaccaaccttatc 218  Q
    |||||||||||||    
T  14380269 gaccaaccttatc 14380281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 38671431 - 38671517
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  38671431 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 38671517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 236
Target Start/End: Complemental strand, 33332210 - 33332076
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||||||||||||| | ||| |||||||||  ||||||||  ||||||||||||  ||||| |||||||||||| ||| |||||||||||    
T  33332210 cttcaaaatctgcaaagaaacactaatatagcagtcttcaactgtcaaaatcgtgtcacaattgtccaaatcgtgacacgattggtgcgtacgacccaag 33332111  T
Q  202 gtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||||||||||||||| || ||| ||||| ||||    
T  33332110 gtacgaccaaccttatcttgaaaatgtgcccagca 33332076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 43864203 - 43864126
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  43864203 tacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 43864126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 48489390 - 48489313
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  48489390 tacaatgtttcccaacccaagagaactctaatcaaagaccatcaaccctaaagttacctcctttgatttcccaagttt 48489313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 47674152 - 47674381
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca----tctcttc 105  Q
    |||||||||| ||||||||||||||||||||||||||||| |||||| | ||||||| |||||||||||||||||||        ||||     ||||||    
T  47674152 tacaatgttttccaacccaagagaactctaatcaaagaccttcaaccttgaagttacctcctttgatttcccaagtttctctctcttcaagctcctcttc 47674251  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| ||||| || ||| |||||||||| ||||||||   |||||   ||    |||| |||||||| ||| ||| ||| |||||||||||    
T  47674252 aaaatctgcaaag-aacacctatatagcagtcttcagctgtcaaaatcatgtcatgttttccaaaatcgtgacacgtttggtgcgtacaacccaaggtac 47674350  T
Q  206 gaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||| |||| |||| ||||    
T  47674351 gaccaaccttatcctgaaaacttgcccagca 47674381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 496192 - 496270
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  496192 tacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccttaaagttacctcatttgatttcccaagtttt 496270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 19502137 - 19502060
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||    
T  19502137 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttctcaagttt 19502060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 24514969 - 24515046
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  24514969 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagttt 24515046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 48491538 - 48491461
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||  |||||||    
T  48491538 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttatcaagttt 48491461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 221
Target Start/End: Complemental strand, 23554999 - 23554785
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tct-cttc 105  Q
    |||||||||||||||| ||||||||||||||||||||||| |||||| | ||||||| |||||||||||||||||||        ||||   ||| ||||    
T  23554999 tacaatgtttcccaactcaagagaactctaatcaaagaccttcaaccctgaagttacctcctttgatttcccaagtttctctctcttcaagctctccttc 23554900  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtca--aattgtgacacgattgatgcatacgacccaaggt 203  Q
    ||||||||||||| |||||||| ||| ||||||||||  |||||||  |||||||  ||   ||  ||| ||| |||||||||||| |||||||||| ||    
T  23554899 aaaatctgcaaag-aacacttatatagcagtcttcag-cgtcaaaatcgtgtcac-gttttccattaatcgtgtcacgattgatgcgtacgacccaatgt 23554803  T
Q  204 acgaccaaccttatcctg 221  Q
    ||||||||||||||||||    
T  23554802 acgaccaaccttatcctg 23554785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 25615822 - 25615736
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||| ||||||||||||||||||||||||||||||| |||| ||||||||  ||||||||||||| |||||||| ||||||    
T  25615822 tacaatgttttccaacccaagagaactctaatcaaagacccttaaccttaaagttaactcctttgatttcctaagttttcctctctt 25615736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 108
Target Start/End: Complemental strand, 29991014 - 29990924
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaaa 108  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| |||||||   ||||||||||||||||||||   ||||||||||    
T  29991014 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgtctcctttgatttcccaagtttctctctcttcaaa 29990924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 4178734 - 4178657
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | |||||||||||| |||||||    
T  4178734 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttctcaagttt 4178657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 31733178 - 31733255
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| || ||||||||| |||||||    
T  31733178 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaactctaaagttacctcttttgatttctcaagttt 31733255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 46516067 - 46515939
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    ||||||||||||||||||| |||||| ||| |||||||||| ||||||||  |||||||  || | ||||| |||||| | ||| |||||||||||||||    
T  46516067 cttcaaaatctgcaaagaa-cacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgccaaatcgtgacatgcttggtgcatacgacccaag 46515969  T
Q  202 gtacgaccaaccttatcctgtaaacgtgcc 231  Q
    ||  |||||||||||||||| |||||||||    
T  46515968 gtgtgaccaaccttatcctgaaaacgtgcc 46515939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 4538855 - 4538979
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||||||||||||||| ||| ||||||| || ||||||||  |||||| | || | ||||| |||||||| ||| ||| ||||| |||||    
T  4538855 cttcaaaatctgcaaagaaacacttatatagcagtctttagctgtcaaaatcgtgtcatattttgccaaatcgtgacacgtttggtgcgtacgatccaag 4538954  T
Q  202 gtacgaccaaccttatcctgtaaac 226  Q
    |||||||||||||| ||||| ||||    
T  4538955 gtacgaccaaccttgtcctgaaaac 4538979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 236
Target Start/End: Complemental strand, 2647457 - 2647323
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||  ||| |||||||||| | ||||||  || ||||  |||  ||||| |||||||||||| ||| |||||||||||    
T  2647457 cttcaaaatctgcacaagaacacttttatagcagtcttcagctctcaaaatcgtatcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 2647358  T
Q  202 gtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||||||| ||||||||| ||||    
T  2647357 gtacgaccaaccttatcctgaaaacgtgcccagca 2647323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 31105602 - 31105688
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||| || ||||||| |||| ||||||||||||||||||| ||||||||| |||||||||||| ||||||||| ||||||    
T  31105602 tacaatgtttctcaccccaagataactataatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttttcctctctt 31105688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 4538749 - 4538826
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||| |||||||||||||||||| ||||||||||||| ||||||| |||| |||| ||||||||||||||||||||    
T  4538749 tacaatttttcccaacccaagagaattctaatcaaagactctcaaccttaaaattacctcctttgatttcccaagttt 4538826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 30 - 95
Target Start/End: Original strand, 30024953 - 30025018
Alignment:
Q  30 caacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  30024953 caacctaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 30025018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 24526106 - 24526184
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||||||||| ||||||||  ||||||||||||||||||| ||||||||  |||||||||||||| ||||||    
T  24526106 tacaatgtttcccaacctaagagaaccataatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttt 24526184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 39731336 - 39731258
Alignment:
Q  18 tacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| || ||||||  |||||||||||||||||||    
T  39731336 tacaatgtttcccaacccaagagaagctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagttt 39731258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 41649219 - 41649296
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    |||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||||  |||||||||||||||||||||    
T  41649219 tacaatgtttcccaacccaagagaactctaataaaaga-ccttaaccctaaagttaactcctttgatttcccaagtttt 41649296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 35853874 - 35853797
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||| ||||||| |  |||||||||||| ||||||    
T  35853874 tacaatgtttcccaacccaagagaactcaaatcaaagaccctaaaccctaaagttgctacctttgatttcctaagttt 35853797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 49092026 - 49092146
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggt-caaattgtgacacgattgatgcatacgacccaa 200  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  || || ||||| ||| ||| |||| ||||||||| ||||    
T  49092026 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgttcaaatcgtgtcactattggtgcatacgatccaa 49092125  T
Q  201 ggtacgaccaaccttatcctg 221  Q
    |||||||||||||||||||||    
T  49092126 ggtacgaccaaccttatcctg 49092146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 4253742 - 4253816
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||| ||||||||||||||| || | |||| |||||||||| ||||||||| ||||||||||||||||||||    
T  4253742 aatgttttccaacccaagagaaccctcaccaaataccctcaaccctaaagttacctcctttgatttcccaagttt 4253816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 21989245 - 21989370
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||| ||   |||||  ||||||||||| ||| || ||||||||    
T  21989245 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacattttc-caaatcatgacacgattgctgcgtatgacccaag 21989343  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||| ||||||||||||| ||||||    
T  21989344 gtacgatcaaccttatcctgaaaacgt 21989370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 48408762 - 48408684
Alignment:
Q  18 tacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| || |||| |  |||||||||||||||||||    
T  48408762 tacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagttt 48408684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 12098098 - 12098159
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  12098098 caagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 12098159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 41317673 - 41317733
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  41317673 caagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagttt 41317733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 23343930 - 23343859
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaag 92  Q
    ||||||||| |||| |||||||| |||||||||||| ||| ||| ||||||||| |||||||||||||||||    
T  23343930 aatgtttccaaacctaagagaaccctaatcaaagactctcgaccctaaagttacatcctttgatttcccaag 23343859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 21983580 - 21983705
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| | ||||||||  |||||||  |||||||  ||   ||||| ||||||| |||| ||| |||||||||||    
T  21983580 cttcaaaatctgcacaagaacacttatatagctgtcttcagcggtcaaaatcgtgtcacgttttc-caaatcgtgacacaattggtgcgtacgacccaag 21983678  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  21983679 gtacgaccaaccttatcctgaaaacgt 21983705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 22 - 104
Target Start/End: Complemental strand, 31518750 - 31518668
Alignment:
Q  22 atgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||| ||||||||| |||||  |||||||||||||| |||| ||||||||  ||||||||||||| |||||||| ||||||    
T  31518750 atgttttccaacccaaaagaaccataatcaaagacccttaaccctaaagttatctcctttgatttccaaagttttcctctctt 31518668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 87
Target Start/End: Original strand, 36574728 - 36574794
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttc 87  Q
    ||||||| ||||||||||||||| || |||||||||| |||||| ||||||||| ||||||||||||    
T  36574728 aatgttttccaacccaagagaaccctcatcaaagaccgtcaaccctaaagttacctcctttgatttc 36574794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 19495759 - 19495716
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  19495759 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctg 19495716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 174 - 236
Target Start/End: Complemental strand, 27347715 - 27347653
Alignment:
Q  174 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||    
T  27347715 gtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagca 27347653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 36146659 - 36146709
Alignment:
Q  46 taatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||    
T  36146659 taatcaaagaccctcaacactaaagttacctcctttgatttcccaagtttt 36146709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 44847820 - 44847762
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  44847820 caaatcgtgccacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 44847762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 226
Target Start/End: Original strand, 2479751 - 2479796
Alignment:
Q  181 gattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  2479751 gattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 2479796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 43864058 - 43864001
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||||||| |||| ||| ||| ||||||||||||||||||||||||||||||| ||||    
T  43864058 aaattgtgtcacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaac 43864001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 4178563 - 4178520
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| ||||| |||||||||||||||||||||||||    
T  4178563 cacgattgatgcgtacgatccaaggtacgaccaaccttatcctg 4178520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 24515132 - 24515183
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||| ||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  24515132 aatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctg 24515183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 23565274 - 23565346
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||| | || |||||||||| ||||||||||||||| |||| ||||||||| ||||||||| ||||||||||    
T  23565274 aatgttttctaaaccaagagaac-ctaatcaaagacccttaacc-taaagttacctcctttgatatcccaagttt 23565346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 43504360 - 43504434
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||| ||||||||| |||||||||||||| || |||| || |||| |  |||||||||||||||||||    
T  43504360 atgtttcccaagccaagagaagctctaatcaaagactctaaaccctagagtttctccctttgatttcccaagttt 43504434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 6360486 - 6360563
Alignment:
Q  154 gtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    |||||||||||   ||||| |||||||| ||| ||| ||||||||||| |||||||||| |||||||| |||| ||||    
T  6360486 gtgtcacaatttcccaaatcgtgacacgtttggtgcgtacgacccaagatacgaccaacattatcctgaaaacttgcc 6360563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 48489228 - 48489175
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||||| |||||||||||| ||| ||| |||||||||| ||||||||||||||||    
T  48489228 caaatcgtgacacgattggtgcgtacaacccaaggtatgaccaaccttatcctg 48489175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 79725 - 79845
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtc-aaattgtgacacgattgatgcatacgacccaa 200  Q
    |||||||||||||| |  ||||| || |||  ||||||||  ||||| ||  |||||||| || ||| |||| |||||  ||||| |||||| |||||||    
T  79725 cttcaaaatctgcacaagaacacatatatagtagtcttcaactgtcagaatcgtgtcacattttgtccaaatcgtgacgtgattggtgcatatgacccaa 79824  T
Q  201 ggtacgaccaaccttatcctg 221  Q
     ||||||||||||||||||||    
T  79825 tgtacgaccaaccttatcctg 79845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 8153271 - 8153211
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||| || |||||||||||||| ||||| ||||||||| ||||||||||| || |||||    
T  8153271 caagaggaccctaatcaaagacccccaaccttaaagttacctcctttgattttcctagttt 8153211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 496365 - 496436
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgcc 240  Q
    |||| |||||||| ||||||| |||||| |||||||   |||||||||||||| ||| ||| ||||||||||    
T  496365 aaatcgtgacacggttgatgcgtacgactcaaggtaaatccaaccttatcctgaaaatgtgtcaagcatgcc 496436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 169 - 228
Target Start/End: Complemental strand, 2389871 - 2389812
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    |||| |||||||| ||| ||  ||||| ||||||||||||||||||||||||| ||||||    
T  2389871 aaatcgtgacacgtttggtgtgtacgatccaaggtacgaccaaccttatcctgaaaacgt 2389812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 35853701 - 35853658
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| ||||| ||||||||||||| |||||||||||    
T  35853701 cacgattgatgcgtacgatccaaggtacgaccgaccttatcctg 35853658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 48491376 - 48491313
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    ||||| |||||||| ||| ||| |||||||||||||||||||||||| ||| || || ||||||    
T  48491376 caaatcgtgacacggttggtgcgtacgacccaaggtacgaccaacctaatcttgaaagcgtgcc 48491313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 101 - 231
Target Start/End: Complemental strand, 4796430 - 4796300
Alignment:
Q  101 tcttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 200  Q
    |||||||||||| || || |||||||| ||| || ||||||  | ||||||  |||||||  |||   ||||||||| ||  ||| ||| ||||| ||||    
T  4796430 tcttcaaaatctacacaggaacacttatatagcaatcttcaactatcaaaatcgtgtcacgtttgtctaaattgtgatacatttggtgcgtacgatccaa 4796331  T
Q  201 ggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    ||||||||||||  ||||||| |||||||||    
T  4796330 ggtacgaccaactctatcctgaaaacgtgcc 4796300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 5817126 - 5817048
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||| || |||||   | | ||||||| ||||||||||||||||| |||||||  |||||||||||    
T  5817126 tacaatgtttcccaaccaaatagaacctcactacaaagacactcaaccataaagttacctcctttgtattcccaagttt 5817048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 154 - 236
Target Start/End: Original strand, 32358410 - 32358492
Alignment:
Q  154 gtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||   |||||  ||||||| ||| ||| ||||| ||||||||||| |||| |||||||| ||||||||| ||||    
T  32358410 gtgtcacaattttccaaatcatgacacgtttggtgcgtacgatccaaggtacgatcaactttatcctgaaaacgtgcccagca 32358492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 47264045 - 47264103
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| || ||||||| | ||||||||||| ||||||||||||||||||| ||||    
T  47264045 caaatcgtgtcaagattgatacgtacgacccaagatacgaccaaccttatcctgaaaac 47264103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 178 - 211
Target Start/End: Original strand, 3050523 - 3050556
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaa 211  Q
    |||||||||||| |||||||||||||||||||||    
T  3050523 cacgattgatgcgtacgacccaaggtacgaccaa 3050556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 9185030 - 9184965
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccataaagttacgtcctttg 82  Q
    ||||||||||||||||||||||||||  || | ||||||  ||||||| ||||||||| |||||||    
T  9185030 tacaatgtttcccaacccaagagaaccttactacaaagatactcaaccctaaagttacctcctttg 9184965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 2580631 - 2580695
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttg 82  Q
    |||||||||| |||||||||||||||   |  ||||||| ||||||| ||||||||| |||||||    
T  2580631 tacaatgttttccaacccaagagaacctcacacaaagacactcaaccctaaagttacctcctttg 2580695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 150
Target Start/End: Original strand, 2759084 - 2759131
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaa 150  Q
    ||||||||||||||||| |||||||| ||| |||||||||| |||||||    
T  2759084 cttcaaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaa 2759131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 231
Target Start/End: Original strand, 30026393 - 30026432
Alignment:
Q  191 tacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    |||||| |||||||||||||||||||||||| |||||||||    
T  30026393 tacgactcaaggtacgaccaaccttatcctg-aaacgtgcc 30026432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 21 - 236
Target Start/End: Complemental strand, 49918305 - 49918079
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt--------tca---tct-cttcaaa 108  Q
    |||||||||||| |||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||        |||   ||| |||||||    
T  49918305 aatgtttcccaatccaagagaactctaatcaaagaccttcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctacttcaaa 49918206  T
Q  109 atctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgac 208  Q
    |||||||||||| |||||| ||| |||||||||| ||||||||  |||||||| ||   ||||| |||||||||||| ||  |||||||||||||| |||    
T  49918205 atctgcaaagaa-cacttatatagcagtcttcagctgtcaaaatcgtgtcacattttcccaaatcgtgacacgattggtgtgtacgacccaaggtatgac 49918107  T
Q  209 caaccttatcctgtaaacgtgccaagca 236  Q
    ||||||||||||| ||||||||| ||||    
T  49918106 caaccttatcctgaaaacgtgcccagca 49918079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 20 - 218
Target Start/End: Original strand, 28223632 - 28223841
Alignment:
Q  20 caatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct------------cttcaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||   |||            ||||||    
T  28223632 caatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctcaccttcaa 28223731  T
Q  108 aatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacga 207  Q
    ||||||||||| |||||||| ||| |||||||||| ||||||||  |||||||  ||   |||||||||||||| ||  ||| |||||||||||||||||    
T  28223732 aatctgcaaag-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaattgtgacacgttttgtgcgtacgacccaaggtacga 28223830  T
Q  208 ccaaccttatc 218  Q
    |||||||||||    
T  28223831 ccaaccttatc 28223841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 226
Target Start/End: Complemental strand, 31659197 - 31658978
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tctct-tc 105  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||        ||||   ||||| ||    
T  31659197 tacaatgtttccgaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctctctc 31659098  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||||||||  ||||||||  |||||||| ||   ||||| |||||||| ||| ||| |||||||||||||||    
T  31659097 aaaatctgcaaag-aacacttatatagcagtcttcaactgtcaaaatcgtgtcacattttaccaaatcgtgacacgtttggtgcgtacgacccaaggtac 31658999  T
Q  206 gaccaaccttatcctgtaaac 226  Q
     ||||||||||||||| ||||    
T  31658998 aaccaaccttatcctgaaaac 31658978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 218
Target Start/End: Original strand, 28220437 - 28220646
Alignment:
Q  20 caatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct------------cttcaa 107  Q
    ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||   |||            ||||||    
T  28220437 caatgcttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctcaccttcaa 28220536  T
Q  108 aatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacga 207  Q
    ||||||||||| |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||  ||| |||||||||||||||||    
T  28220537 aatctgcaaag-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgttttgtgcgtacgacccaaggtacga 28220635  T
Q  208 ccaaccttatc 218  Q
    |||||||||||    
T  28220636 ccaaccttatc 28220646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 10925182 - 10924972
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tct-cttc 105  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||||        ||||   ||| ||||    
T  10925182 tacaatgtttcccaacccaagagaactataatcaaagaccctcaaccctaaagttacctcctttgattttccaagtttctctctcttcaagctctccttc 10925083  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||||||||| ||||||||  |||||||  || | ||||| |||||||| ||||||| || |||||||||||     
T  10925082 aaaatctgcaaag-aacacttatataacagtcttcagctgtcaaaatcgtgtcacgttttgccaaatcgtgacacggttgatgcgtatgacccaaggtat 10924984  T
Q  206 gaccaaccttat 217  Q
    ||||||| ||||    
T  10924983 gaccaactttat 10924972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 229
Target Start/End: Complemental strand, 3156825 - 3156604
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct------------cttc 105  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||   |||            ||||    
T  3156825 tacaatgtttccaaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttccagctctccttc 3156726  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||||||||| |||||||| ||||| ||  || | ||||  |||||||| ||| ||  || || |||||||||    
T  3156725 aaaatctgcaaag-aacacttatataacagtcttcagctgtcaaaattgtgttacgttttgccaaacggtgacacgtttggtgtgtatga-ccaaggtac 3156628  T
Q  206 gaccaaccttatcctgtaaacgtg 229  Q
    |||||||||||||||| |||||||    
T  3156627 gaccaaccttatcctgaaaacgtg 3156604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 197117 - 197203
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  197117 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgattttccaagttttcctctctt 197203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 3847330 - 3847416
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||| ||||||    
T  3847330 tacaatgtttcccaacccaagagaactctaatcaaagaccctcgaccctaaagttacctcctttgatttcccaagttttcctctctt 3847416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 834376 - 834459
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct 101  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||| ||||    
T  834376 tacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttttatct 834459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 46064877 - 46064644
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctcttcaaaatctgc--- 114  Q
    |||||||||| ||| |||||||||||  |||||||||||||||||| |||||||||| | |||||||||||||||||||  |||||| ||  ||| |       
T  46064877 tacaatgttttccaccccaagagaaccataatcaaagaccctcaacaataaagttaccttctttgatttcccaagtttttctctcttgaagctctcctta 46064778  T
Q  115 -aaa-------gaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacg 206  Q
     |||       | |||||||| ||| |||||||||| ||||||||  ||| ||  ||||| ||||| ||| |||| ||||| | ||||||||||||||||    
T  46064777 aaaattgaattggaacacttaaataacagtcttcagctgtcaaaatcgtgacatgattggccaaatcgtgtcacggttgatacgtacgacccaaggtacg 46064678  T
Q  207 accaaccttatcctgtaaacgtgccaagcatgcc 240  Q
    |||||| |||||||| ||| ||||||||||||||    
T  46064677 accaactttatcctgaaaatgtgccaagcatgcc 46064644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 218
Target Start/End: Complemental strand, 1833481 - 1833270
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt-tc--------atctc---ttc 105  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||| ||        |||||   |||    
T  1833481 tacaatgtttcccaatccaagagaactctaatcaaagaccctcaaccttaaagttatctcctttgatttcccaagtttctctctcttcaatctctcattc 1833382  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| || ||||| |||  ||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| ||| ||||||||||     
T  1833381 aaaatctgcaaag-aatacttatataggagtcttcagctgtcaaaatcgtgtcacgttttcgcaaatcgtgacacgtttggtgcgtacaacccaaggtat 1833283  T
Q  206 gaccaaccttatc 218  Q
    |||||||||||||    
T  1833282 gaccaaccttatc 1833270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 3189290 - 3189213
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  3189290 tacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 3189213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 3198107 - 3198030
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  3198107 tacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 3198030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 3206946 - 3206869
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  3206946 tacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 3206869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 102 - 229
Target Start/End: Original strand, 4552952 - 4553079
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||||||||||||||| ||| |||||||||| ||||||||| |||||||  || | ||||| |||||||| ||||||| |||||| || |    
T  4552952 cttcaaaatctgcaaagaaacacttatataacagtcttcagctgtcaaaaacgtgtcacgttttgccaaatcgtgacacggttgatgcgtacgactcacg 4553051  T
Q  202 gtacgaccaaccttatcctgtaaacgtg 229  Q
     |||||| |||||||||||| |||||||    
T  4553052 atacgactaaccttatcctgaaaacgtg 4553079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 13138183 - 13138261
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  13138183 tacaatgtttcccaccccaagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 13138261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 13598737 - 13598863
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||| ||| ||| |||||||||| ||||||||  |||||||  |||  |||||||||||||||||| ||| |||||||||||    
T  13598737 cttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaag 13598836  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  13598837 gtacgaccaaccttatcctgaaaacgt 13598863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 15820266 - 15820188
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||| || ||||||||||||||||||    
T  15820266 tacaatgtttcccaactcaagagaactctaatcaaagaccctcaaccctaaagttacctcttttgatttcccaagtttt 15820188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 20762631 - 20762554
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  20762631 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagttt 20762554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 44455119 - 44455042
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||    
T  44455119 tacaatgtttcccaacccaagaaaactctaatcaaagaccctcaaccctaaagttacctcctttgatttaccaagttt 44455042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 96
Target Start/End: Original strand, 928190 - 928265
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||||||||||||||  ||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  928190 aatgtttcccaacccaagagaatcctaatcaaagaccttcaaccataaagttacctcctttgatttcccaagtttt 928265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 30476657 - 30476886
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tct-cttc 105  Q
    |||||||||||||||||||||||||||||||||||| ||||||| || |||  |||| || ||||||||||||||||        ||||   ||| ||||    
T  30476657 tacaatgtttcccaacccaagagaactctaatcaaataccctcagccctaacattacatcatttgatttcccaagtttctctctcttcaagctctccttc 30476756  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||  ||||||||||||| |    
T  30476757 aaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgtgtacgacccaaggttc 30476855  T
Q  206 gaccaaccttatcctgtaaacgtgccaagca 236  Q
     |||||||||||| || |||| |||| ||||    
T  30476856 aaccaaccttatcttgaaaacttgcccagca 30476886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 8550996 - 8551082
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||  ||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||| ||||||    
T  8550996 tacaatgtttcttaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctctt 8551082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 13659545 - 13659631
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||| |||||||||    
T  13659545 tacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagttgtcatctctt 13659631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 23555474 - 23555552
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| | ||||||| |||||||||||||||||||||    
T  23555474 tacaatgtttcccaacccaagagaactttaatcaaagatcctcaaccctgaagttacctcctttgatttcccaagtttt 23555552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 13316527 - 13316604
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |  |||||||||||||||||||    
T  13316527 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagttt 13316604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 102 - 221
Target Start/End: Original strand, 29652150 - 29652269
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| | ||||||||| ||| |||||||||| ||||||||   ||||||  |||  ||||| |||||||||||| ||  |||||||||||    
T  29652150 cttcaaaatctgcacaaaaacacttatatagcagtcttcagctgtcaaaatcatgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaag 29652249  T
Q  202 gtacgaccaaccttatcctg 221  Q
    ||||||||||||||||||||    
T  29652250 gtacgaccaaccttatcctg 29652269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 37070104 - 37070230
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| ||||||| || |||||||| | |||||| |||   ||||| ||| |||||||| ||| |||||||||||    
T  37070104 cttcaaaatctgcacaagaacacttatatagcagtctttagctgtcaaaattatgtcacgattttccaaatcgtggcacgattggtgcgtacgacccaag 37070203  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  37070204 gtacgaccaaccttatcctgaaaacgt 37070230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 40122407 - 40122485
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||||||| |||||| ||||||||| || || |||||||||||||||||| |||||||||||||||||||||    
T  40122407 tacaatgtttcccaatccaagataactctaattaatgatcctcaaccataaagttacctcctttgatttcccaagtttt 40122485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 37503763 - 37503840
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  37503763 tacaatattttccaacccaatagaactctaatcaaagaccctcaaccctaaagtcacctcctttgatttcccaagttt 37503840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 37560078 - 37560155
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||| | |||||||||||||||||||||||||||||||||| ||||||||| || ||||||||| |||||||    
T  37560078 tacaatgttttcaaacccaagagaactctaatcaaagaccctcaaccttaaagttacctcatttgatttctcaagttt 37560155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 45644564 - 45644642
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    |||||||||| |||||| |||||||| |||||||||||||||||||| ||||||||  |||||||||||||| ||||||    
T  45644564 tacaatgttttccaacctaagagaaccctaatcaaagaccctcaaccctaaagttatctcctttgatttccctagtttt 45644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 50169419 - 50169496
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||| ||| ||||| ||| |||||||||| ||||||||| |||||||||||||| |||||    
T  50169419 tacaatgtttcccaacccaagataaccctaataaaaaaccctcaaccctaaagttacctcctttgatttccctagttt 50169496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 3282044 - 3282169
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  ||  |||||| ||| |||||||| ||| |||||||||||    
T  3282044 cttcaaaatctgcataagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttt-tcaaatcgtggcacgattggtgcgtacgacccaag 3282142  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    ||| ||||||||||||| || ||||||    
T  3282143 gtatgaccaaccttatcttgaaaacgt 3282169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 148 - 233
Target Start/End: Complemental strand, 16455464 - 16455379
Alignment:
Q  148 aaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaa 233  Q
    ||||| ||||||| ||||| ||||| ||| |||| ||||||| ||||||||||||||||| ||| ||||||||| |||||||||||    
T  16455464 aaaaacgtgtcacgattggccaaatcgtgtcacggttgatgcgtacgacccaaggtacgagcaaacttatcctgaaaacgtgccaa 16455379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 4552846 - 4552922
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt 94  Q
    ||||||||||| ||||||||||||||   ||| |||||||||||||| ||||||||| |||||| ||||||||||||    
T  4552846 tacaatgtttctcaacccaagagaacctcaattaaagaccctcaaccctaaagttacctcctttaatttcccaagtt 4552922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 50167414 - 50167474
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  50167414 caagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagttt 50167474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 29135847 - 29135780
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  29135847 aaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcccagca 29135780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 21536330 - 21536205
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| | | |||||||| ||| |||||||||||    
T  21536330 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttc-caaatcggggcacgattggtgcgtacgacccaag 21536232  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    ||||||||||||| |||||| ||||||    
T  21536231 gtacgaccaacctcatcctgaaaacgt 21536205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 51765354 - 51765277
Alignment:
Q  18 tacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||| |||||||||||| ||||||||||||||||| |||| || ||||||  |||||||||||||||||||    
T  51765354 tacaatgtttcc-aacccaagagaagctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagttt 51765277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 777172 - 777112
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||| ||||||||||||| |||||| ||||||||| |||||||||||||| |||||    
T  777172 caagagaaccctaatcaaagaccatcaaccctaaagttacctcctttgatttccctagttt 777112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 28265793 - 28265852
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  28265793 caagagaac-ctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagttt 28265852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 13604317 - 13604259
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  13604317 caaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 13604259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 3189150 - 3189097
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggt-acgaccaaccttatcct 220  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||    
T  3189150 caaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcct 3189097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 3197967 - 3197914
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggt-acgaccaaccttatcct 220  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||    
T  3197967 caaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcct 3197914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 220
Target Start/End: Complemental strand, 3206785 - 3206732
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggt-acgaccaaccttatcct 220  Q
    ||||||||| |||||||||||| ||||||||||||| |||||||||||||||||    
T  3206785 caaattgtgtcacgattgatgcgtacgacccaaggtaacgaccaaccttatcct 3206732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 147 - 231
Target Start/End: Original strand, 37033636 - 37033720
Alignment:
Q  147 caaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    ||||| |||||||| |||   ||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| |||| ||||    
T  37033636 caaaattgtgtcacgatttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacttgcc 37033720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 221
Target Start/End: Original strand, 13316694 - 13316741
Alignment:
Q  174 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  13316694 gtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctg 13316741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 13547677 - 13547726
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttat 217  Q
    ||||| |||||||| ||| ||| |||||||||||||||||||||||||||    
T  13547677 caaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat 13547726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 13549588 - 13549637
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttat 217  Q
    ||||| |||||||| ||| ||| |||||||||||||||||||||||||||    
T  13549588 caaatcgtgacacggttggtgcgtacgacccaaggtacgaccaaccttat 13549637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 220
Target Start/End: Complemental strand, 15820090 - 15820053
Alignment:
Q  183 ttgatgcatacgacccaaggtacgaccaaccttatcct 220  Q
    ||||||| ||||||||||||||||||||||||||||||    
T  15820090 ttgatgcgtacgacccaaggtacgaccaaccttatcct 15820053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 154 - 239
Target Start/End: Original strand, 22819819 - 22819904
Alignment:
Q  154 gtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgc 239  Q
    ||||||| |||||  ||||||||  ||| | ||||| ||||||||||||||||||||| ||||| ||| ||||||| ||| |||||    
T  22819819 gtgtcacgattggcaaaattgtgttacggtcgatgcgtacgacccaaggtacgaccaaacttattctgaaaacgtgtcaaacatgc 22819904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 43342468 - 43342528
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtccttt 81  Q
    |||||||||||||| ||||||||||| | |||||||||||| ||  |||||||| ||||||    
T  43342468 aatgtttcccaaccgaagagaactctcaccaaagaccctcatcccaaaagttacatccttt 43342528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 231
Target Start/End: Complemental strand, 11348298 - 11348236
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    |||| |||||||| ||| ||| ||||| |||| |||||||||||||||||||| |||| ||||    
T  11348298 aaatcgtgacacgtttggtgcgtacgatccaatgtacgaccaaccttatcctgaaaacttgcc 11348236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 37503859 - 37503916
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcac 160  Q
    ||||||||||||||||||| |||||| |||||||||||||| ||| ||||  |||||||    
T  37503859 cttcaaaatctgcaaagaa-cacttatatatcagtcttcagctgtaaaaatcgtgtcac 37503916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 16124327 - 16124294
Alignment:
Q  195 acccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    ||||||||||||||||||||||||||| ||||||    
T  16124327 acccaaggtacgaccaaccttatcctgaaaacgt 16124294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 82
Target Start/End: Complemental strand, 27104254 - 27104193
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttg 82  Q
    ||||||||||||||||||||| |||    ||||||| ||||||| ||||||||| |||||||    
T  27104254 aatgtttcccaacccaagagacctcactacaaagacactcaaccttaaagttacctcctttg 27104193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 176 - 220
Target Start/End: Complemental strand, 193184 - 193140
Alignment:
Q  176 gacacgattgatgcatacgacccaaggtacgaccaaccttatcct 220  Q
    |||||| ||| ||| ||||||||||||||||||||| ||||||||    
T  193184 gacacgtttggtgcgtacgacccaaggtacgaccaatcttatcct 193140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 44454957 - 44454889
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||| |||||||| ||  ||| ||||||||||||||| |||||||||||| || |||| |||| ||||    
T  44454957 caaatcgtgacacgtttagtgcgtacgacccaaggtacaaccaaccttatcttgaaaacttgcccagca 44454889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 231
Target Start/End: Complemental strand, 37740585 - 37740361
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttcat-ct---cttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||        ||||| ||   ||||    
T  37740585 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaacttacctcctttgatttcccaagtttctctctcttcatgctctccttc 37740486  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||  ||| ||  |||||||||||||||    
T  37740485 aaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacatttggtgtgtacgacccaaggtac 37740387  T
Q  206 gaccaaccttatcctgtaaacgtgcc 231  Q
    |||||||||||||||| |||| ||||    
T  37740386 gaccaaccttatcctgaaaacttgcc 37740361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 20 - 226
Target Start/End: Original strand, 34570625 - 34570842
Alignment:
Q  20 caatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct------------cttcaa 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||   |||            ||||||    
T  34570625 caatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagctacctcctttgatttcccaagtttctctctgttccagctctccttcaa 34570724  T
Q  108 aatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacga 207  Q
    ||||||||||| ||||| || |||  ||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| ||||||||||||||| |    
T  34570725 aatctgcaaag-aacacatatatagtagtcttcagctgtcaaaatcgtgtcacgttttcccaaatcgtgacacgtttggtgcgtacgacccaaggtacaa 34570823  T
Q  208 ccaaccttatcctgtaaac 226  Q
    |||||||||||||| ||||    
T  34570824 ccaaccttatcctgaaaac 34570842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 18 - 236
Target Start/End: Original strand, 54200115 - 54200344
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagt---------tttcatc---tcttc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||         ||||| |   |||||    
T  54200115 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcctaagtttctctctctttcagctcttcttc 54200214  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    |||| || ||||| |||||||| ||| |||||||||| | ||||||  |||||||| ||   ||||| |||||  | ||| ||| |||||||||||||||    
T  54200215 aaaaactacaaag-aacacttatatagcagtcttcagctatcaaaatcgtgtcacattttcccaaatcgtgactagtttggtgcgtacgacccaaggtac 54200313  T
Q  206 gaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||||||||||| || |||| |||| ||||    
T  54200314 gaccaaccttatcttgaaaacttgcccagca 54200344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 102 - 236
Target Start/End: Complemental strand, 25861793 - 25861659
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||||||||||||||| |||  ||||||||  ||||||||  |||||||  |||  ||||| |||||||||||||||| |||||||||||    
T  25861793 cttcaaaatctgcaaagaaacacttatatagaagtcttcaactgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattgatgcgtacgacccaag 25861694  T
Q  202 gtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||||||| |||| |||| ||||    
T  25861693 gtacgaccaaccttatcctgaaaacatgcccagca 25861659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 5429638 - 5429561
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  5429638 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacttcctttgatttcccaagttt 5429561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 48143001 - 48142924
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  48143001 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 48142924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 52082866 - 52082943
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  52082866 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 52082943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 5871779 - 5871693
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||||||| |||||||||||||||||||||| ||||||    
T  5871779 tacaatgtttcccaacccaagagaactctaatcaaagacccataaccctaaagttacctcctttgatttcccaagttttcctctctt 5871693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 13009640 - 13009726
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||||| ||||||    
T  13009640 tacaatgtttcccaacccaagagaactctaatcaaagacccttaaccctaaagttacctcatttgatttcccaagttttcctctctt 13009726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 236
Target Start/End: Complemental strand, 36314990 - 36314856
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||| |||||||||||    
T  36314990 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 36314891  T
Q  202 gtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||||||| ||||||||| ||||    
T  36314890 gtacgaccaaccttatcctgaaaacgtgcccagca 36314856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 102 - 236
Target Start/End: Complemental strand, 36329199 - 36329065
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||| |||||||||||    
T  36329199 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 36329100  T
Q  202 gtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||||||| ||||||||| ||||    
T  36329099 gtacgaccaaccttatcctgaaaacgtgcccagca 36329065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 9927666 - 9927743
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  9927666 tacaatgtttcccaacccaagagaactttaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 9927743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 12739759 - 12739836
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  12739759 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 12739836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 12747965 - 12748042
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  12747965 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 12748042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 239
Target Start/End: Complemental strand, 24969067 - 24968837
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt------------caaa 108  Q
    ||||||||||||||||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||  ||||||             |||    
T  24969067 aatgtttcccaacccaagagaactctaatcaaagaccgtcaaccttaaagttacctcctttgatttcccaagtttttctctcttgaagttctcataaaaa 24968968  T
Q  109 atctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgac 208  Q
    ||||| | ||||||||||| |||  |  |  ||  |||||| |  ||||||| |||||  ||||  || ||||||||| || |||||||||| |||||||    
T  24968967 atctgaacagaaacacttaaatagtacccaacaactgtcaatatcgtgtcacgattggcaaaatcatgtcacgattgaagcgtacgacccaatgtacgac 24968868  T
Q  209 caaccttatcctgtaaacgtgccaagcatgc 239  Q
    ||||||||||||| ||||||| |||||||||    
T  24968867 caaccttatcctgaaaacgtgtcaagcatgc 24968837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 52095571 - 52095648
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||||||    
T  52095571 tacaatgtttcccaacccaagagaactctaatcaaagtccctcaaccctaaagttacctcctttgatttcccaagttt 52095648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 56178845 - 56178922
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||    
T  56178845 tacaatgtttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttacctcctttgatttcccaagttt 56178922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 21 - 104
Target Start/End: Original strand, 47038621 - 47038704
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||  |||||||||||||| ||||||| ||||||    
T  47038621 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttaactcctttgatttccccagttttcttctctt 47038704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 217
Target Start/End: Complemental strand, 29254453 - 29254243
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct------------cttc 105  Q
    |||||||||||||||||||||||||||||| ||||||||| |||||| ||||||||  ||||||||||||||||||||   |||            ||||    
T  29254453 tacaatgtttcccaacccaagagaactctactcaaagaccttcaaccctaaagttatctcctttgatttcccaagtttctctctctacaacctcaccttc 29254354  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||| ||| ||| ||||| ||||  |||    
T  29254353 aaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttttccaaatcgtgacacgtttggtgcgtacgatccaaaatac 29254255  T
Q  206 gaccaaccttat 217  Q
    ||||||||||||    
T  29254254 gaccaaccttat 29254243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 27 - 95
Target Start/End: Original strand, 52093882 - 52093950
Alignment:
Q  27 tcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  52093882 tcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 52093950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 5268960 - 5268834
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||| ||||  |||||||  |||  ||||| |||||||||||| ||| |||||||||||    
T  5268960 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 5268861  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  5268860 gtacgaccaaccttatcctgaaaacgt 5268834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 26175845 - 26175922
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||| |||||| ||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  26175845 tacaatgtttcccaacccaacagaactttaatcaaagaccctcaactctaaagttacctcctttgatttcccaagttt 26175922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 30000014 - 30000091
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| |||||||   ||||||||||||||||||||    
T  30000014 tacaatgtttccaaacccaagagaactctaatcaaagaccctaaaccctaaagttgtctcctttgatttcccaagttt 30000091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 103 - 219
Target Start/End: Complemental strand, 38152197 - 38152081
Alignment:
Q  103 ttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaagg 202  Q
    ||||||||||||| || |||||||| ||| |||| ||||| ||||||||  |||||||| ||  ||||| ||| | ||||||||||| ||||| ||||||    
T  38152197 ttcaaaatctgcacaggaacacttatatagcagtattcagctgtcaaaatcgtgtcacattttttcaaaatgtaaaacgattgatgcgtacgatccaagg 38152098  T
Q  203 tacgaccaaccttatcc 219  Q
    |||||||||||||||||    
T  38152097 tacgaccaaccttatcc 38152081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 8689256 - 8689131
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| ||| |||||||| ||| |||||||||||    
T  8689256 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttc-caaatcgtggcacgattggtgcgtacgacccaag 8689158  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  8689157 gtacgaccaaccttatcctgaaaacgt 8689131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 13992494 - 13992572
Alignment:
Q  18 tacaatgtttcccaacccaagaga-actctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||| ||||||| |  |||||||||||||||||||    
T  13992494 tacaatgtttcccaacccaagagagactctaatcaaagaccctaaaccctaaagttgctacctttgatttcccaagttt 13992572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 52467567 - 52467641
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||| |||||||||||||||||||| |||| |||| |||||||||| ||| |||||    
T  52467567 aatgtttcccaacccaagagaaccctaatcaaagaccctcaaccctaaaattacctcctttgattaccctagttt 52467641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 6743175 - 6743046
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||  |||||||| |||||||   ||   ||||| |||||||||||  ||| |||| ||||||    
T  6743175 cttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcaagttttcccaaatcgtgacacgattagtgcgtacgtcccaag 6743076  T
Q  202 gtacgaccaaccttatcctgtaaacgtgcc 231  Q
    |||||||||||||||||||| |||||||||    
T  6743075 gtacgaccaaccttatcctgaaaacgtgcc 6743046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 12745645 - 12745722
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||| |||||||||| ||||||||||||||||||||||||||||||  ||||||||| ||||||  ||||||||||||    
T  12745645 tacattgtttcccaaaccaagagaactctaatcaaagaccctcaactctaaagttacctccttttttttcccaagttt 12745722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 36994483 - 36994407
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  36994483 tacaatgtttgccaaatcaagagaactctaatcaaagaccctcaacca-aaagttacctcctttgattttccaagttt 36994407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 16623053 - 16622935
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| | ||||||||| ||| ||| |||||  ||||||||  |||||||  ||   ||||| |||||||||||| ||| |||||||||||    
T  16623053 cttcaaaatctgcacaaaaacacttatatagcagccttcacctgtcaaaatcgtgtcacgttttc-caaatcgtgacacgattggtgcgtacgacccaag 16622955  T
Q  202 gtacgaccaaccttatcctg 221  Q
    ||||||||||||||||||||    
T  16622954 gtacgaccaaccttatcctg 16622935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 105 - 236
Target Start/End: Original strand, 54867519 - 54867650
Alignment:
Q  105 caaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggta 204  Q
    ||||||||||| |  |||||||| |||  ||||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||| ||||| ||||||||    
T  54867519 caaaatctgcacaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgatccaaggta 54867618  T
Q  205 cgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||   ||||||||| ||||    
T  54867619 cgaccaaccttatccgaaaaacgtgcccagca 54867650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 3910066 - 3909988
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||| ||||| ||||||||||||||||||| |||| |||| | ||||||| |||||||||||||| ||||||    
T  3910066 tacaatgtttctcaacctaagagaactctaatcaaaggccctaaacccttaagttacctcctttgatttccctagtttt 3909988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5370295 - 5370372
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||| |||||||||||| |||||||||||||| |||| |||||||   |||||||||||| |||||||    
T  5370295 tacaatgtttcccagcccaagagaactataatcaaagaccctaaaccctaaagttgtctcctttgatttctcaagttt 5370372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 46147581 - 46147642
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||| ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  46147581 caagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttt 46147642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 168 - 228
Target Start/End: Original strand, 5148080 - 5148140
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    ||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  5148080 caaatcgtgacacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 5148140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 45687422 - 45687482
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  45687422 caagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagttt 45687482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 231
Target Start/End: Original strand, 27417539 - 27417602
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||||||||| || ||||||    
T  27417539 caaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaccgtgcc 27417602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 231
Target Start/End: Complemental strand, 41639145 - 41639082
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    ||||| |||||||  ||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  41639145 caaatcgtgacacagttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacgtgcc 41639082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 16628632 - 16628517
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||| | | ||||||||| ||| ||| |||||  ||||||||  |||||||  ||   ||||| |||||||||||| ||| |||||||||||    
T  16628632 cttcaaaatctgaacaaaaacacttatatagcagccttcatctgtcaaaatcgtgtcacgttttc-caaatcgtgacacgattggtgcgtacgacccaag 16628534  T
Q  202 gtacgaccaaccttatc 218  Q
    |||||||||||||||||    
T  16628533 gtacgaccaaccttatc 16628517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 81
Target Start/End: Original strand, 48142591 - 48142651
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtccttt 81  Q
    ||||||||||||| ||||||||| ||||||||||||| |||||| ||||||||| ||||||    
T  48142591 aatgtttcccaactcaagagaaccctaatcaaagaccatcaaccctaaagttacctccttt 48142651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 50674434 - 50674502
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||| |||||||| ||| ||| ||||||||||||||| ||||||||||||||| ||||||||| ||||    
T  50674434 caaatcgtgacacgtttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgtgcccagca 50674502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 52095740 - 52095783
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  52095740 cacgattgatgcttacgacccaaggtacgaccaaccttatcctg 52095783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 26363845 - 26363787
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||||||||||||| ||| ||| |||||||||||||| |||||||||||||||| ||||    
T  26363845 caaattgtgacacgtttggtgcgtacgacccaaggtatgaccaaccttatcctgaaaac 26363787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 31495522 - 31495596
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||| ||||||||||||||  | |||| || ||||||  |||||||||||||||||||    
T  31495522 atgtttcccaacccaagagaagctctaatcaaagactataaaccctagagttactccctttgatttcccaagttt 31495596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 39774031 - 39773981
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcc 219  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||||    
T  39774031 aaattgtgtcacgattgatgcgtatgacccaaggtacgaccaaccttatcc 39773981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 104 - 197
Target Start/End: Complemental strand, 35662070 - 35661978
Alignment:
Q  104 tcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacc 197  Q
    ||||||||||||||||| |||||| ||| ||||||||||||||||||| ||| ||||  || | ||||| |||||||| ||| ||| |||||||    
T  35662070 tcaaaatctgcaaagaa-cacttatatagcagtcttcagttgtcaaaattgtatcacgttttgccaaatcgtgacacggttggtgcgtacgacc 35661978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 52083027 - 52083080
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  52083027 caaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctg 52083080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 52094034 - 52094087
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||||| ||| |||||||||||| |||||||||||||| ||||||||||||||||    
T  52094034 caaatcgtgtcacgattgatgcttacgacccaaggtatgaccaaccttatcctg 52094087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 6655536 - 6655468
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||| |||||||| ||| ||| |||||||||| |||||||||||||||||||| |||| |||| ||||    
T  6655536 caaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagca 6655468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 12745787 - 12745839
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||| ||||||||||||  || |||||||||||||||||||||||||||||||    
T  12745787 aaatcgtgacacgattggcgcgtacgacccaaggtacgaccaaccttatcctg 12745839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Original strand, 37229962 - 37230022
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||| ||| ||||||||||||||| |||| ||||||||| |||||||||||| |||||||    
T  37229962 caagataaccctaatcaaagaccctaaaccctaaagttacctcctttgatttctcaagttt 37230022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 40630564 - 40630496
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||| |||||||| ||| |||||| |||||||||||||||||||||||| ||| ||| ||||| ||||    
T  40630564 caaatcgtgacacgtttggtgcatatgacccaaggtacgaccaaccttattctgaaaatgtgcctagca 40630496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 221
Target Start/End: Original strand, 46570115 - 46570167
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||| |||||||| ||||||| |||||||||| ||||||||||||||||||||    
T  46570115 aaatcgtgacacgtttgatgcgtacgacccaaagtacgaccaaccttatcctg 46570167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 240
Target Start/End: Complemental strand, 3909893 - 3909823
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgcc 240  Q
    |||| |||||||| ||||||| |||||| |||||||||||||||||||| ||  ||||||||||| ||||||    
T  3909893 aaatcgtgacacggttgatgcgtacgactcaaggtacgaccaaccttat-cttaaaacgtgccaaacatgcc 3909823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 5143597 - 5143723
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaat-gtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 200  Q
    |||||||||||||| |  |||||||| ||| ||||||||||| |  |||||| |||||||  ||   ||||| |||||||||||| |||  || ||||||    
T  5143597 cttcaaaatctgcacaagaacacttatatagcagtcttcagtagataaaaatcgtgtcacgttttc-caaatcgtgacacgattggtgcgcacaacccaa 5143695  T
Q  201 ggtacgaccaaccttatcctgtaaacgt 228  Q
    ||| ||||||||||||||||| ||||||    
T  5143696 ggtgcgaccaaccttatcctgaaaacgt 5143723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 178 - 228
Target Start/End: Original strand, 3777961 - 3778011
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||| ||| |||||||||||||||||||||||||||| || ||||||    
T  3777961 cacgattggtgcgtacgacccaaggtacgaccaaccttatcttgaaaacgt 3778011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 5208055 - 5208125
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaa 91  Q
    |||||||||||| |||||||||| || | ||||||||| ||||| || |||||| ||||||||||| ||||    
T  5208055 aatgtttcccaatccaagagaaccctcaccaaagacccgcaaccctatagttacctcctttgattttccaa 5208125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 9927831 - 9927889
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| |||||||| ||| ||| |||||||||||| |||||||||||||||||| ||||    
T  9927831 caaatcgtgacacgtttggtgcgtacgacccaaggaacgaccaaccttatcctgaaaac 9927889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 21704040 - 21704114
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||| |||||||||||||| || | |||||||  |||||| ||||||||| || ||||||||| |||||||    
T  21704040 aatgtttctcaacccaagagaaccctcaccaaagactttcaaccttaaagttacctcatttgatttctcaagttt 21704114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 96
Target Start/End: Original strand, 36463639 - 36463689
Alignment:
Q  46 taatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||||||||||||||| | ||||||||| |||| ||||||||||||||||    
T  36463639 taatcaaagaccctcaatcctaaagttacctcctatgatttcccaagtttt 36463689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 5396384 - 5396327
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||| ||| |||||||| ||| ||||||||||||||||| ||||||||||||| ||||    
T  5396384 aaatcgtggcacgattggtgcgtacgacccaaggtacgatcaaccttatcctgaaaac 5396327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 226
Target Start/End: Complemental strand, 5429472 - 5429420
Alignment:
Q  174 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||||||||||| ||| ||||||||||||||||||||| |||| |||| ||||    
T  5429472 gtgacacgattggtgcgtacgacccaaggtacgaccaatcttaacctgaaaac 5429420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 21 - 84
Target Start/End: Complemental strand, 6677424 - 6677360
Alignment:
Q  21 aatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgat 84  Q
    |||||||||||||||||||||| | || | ||||||| ||||||| ||||||||| |||||||||    
T  6677424 aatgtttcccaacccaagagaacccctgaacaaagacactcaaccctaaagttacctcctttgat 6677360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 229
Target Start/End: Complemental strand, 54882619 - 54882559
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtg 229  Q
    |||||||| |||  ||| ||| ||||||||||||||||| ||||||||||||| |||||||    
T  54882619 aaattgtgtcacagttggtgcgtacgacccaaggtacgatcaaccttatcctgaaaacgtg 54882559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 21 - 92
Target Start/End: Complemental strand, 6376030 - 6375960
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaag 92  Q
    |||||| |||||||||||| | || | | ||||||||||||||| |||| |||| |||||||||||||||||    
T  6376030 aatgttccccaacccaaga-atctttcaccaaagaccctcaaccctaaaattacctcctttgatttcccaag 6375960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 6542390 - 6542455
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaat--caaagaccctcaaccataaagttacgtcctttg 82  Q
    |||||||||||||||||||||||||| || ||  ||||||| ||||||| ||||||||| |||||||    
T  6542390 tacaatgtttcccaacccaagagaac-ctcattacaaagacactcaaccctaaagttacctcctttg 6542455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 26175941 - 26175998
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcac 160  Q
    ||||||||||||||||| |||||||| ||| |||||||||| ||||||||  |||||||    
T  26175941 cttcaaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaatcgtgtcac 26175998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 31474109 - 31474063
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaacc 64  Q
    ||||||||||||||  ||||||||||  |||||||||||||||||||    
T  31474109 tacaatgtttcccactccaagagaaccttaatcaaagaccctcaacc 31474063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 151
Target Start/End: Original strand, 12745741 - 12745789
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaa 151  Q
    ||||||||||||||||| |||||||| ||| |||||||||| ||||||||    
T  12745741 cttcaaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaa 12745789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 21 - 92
Target Start/End: Original strand, 39593971 - 39594044
Alignment:
Q  21 aatgtttc-ccaacccaagagaac-tctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaag 92  Q
    |||||||| ||||||||||||||| | | ||||||||| | ||||| ||||||||| || ||||||||||||||    
T  39593971 aatgtttctccaacccaagagaacctatcatcaaagactcccaaccttaaagttacctcatttgatttcccaag 39594044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 83; Significance: 2e-39; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 229
Target Start/End: Original strand, 36318218 - 36318440
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt------------c 105  Q
    |||||| ||||||||||||||| ||||||||||||||||  |||||| ||||||||| ||||||||||||||||||||   ||||||            |    
T  36318218 tacaatatttcccaacccaagataactctaatcaaagacattcaaccctaaagttacctcctttgatttcccaagtttctctctcttttacctctccttc 36318317  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||||| |||||| ||| |||||||||| ||||||||  |||||||  || |||||||||||||||| ||| ||| |||||  ||||||||    
T  36318318 aaaatctgcaaagaa-cacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttgtcaaattgtgacacggttggtgcgtacgattcaaggtac 36318416  T
Q  206 gaccaaccttatcctgtaaacgtg 229  Q
    |||||||||||||||| |||||||    
T  36318417 gaccaaccttatcctgaaaacgtg 36318440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 11151800 - 11151886
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  11151800 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 11151886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 14202616 - 14202702
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||| ||||||    
T  14202616 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacctcatttgatttcccaagttttcctctctt 14202702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 42362311 - 42362225
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  42362311 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 42362225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 11690460 - 11690374
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  11690460 tacaatgtttcccaacccaagagaactataatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 11690374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 39284844 - 39284767
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  39284844 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 39284767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 97
Target Start/End: Original strand, 723953 - 724032
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttc 97  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||    
T  723953 tacaatgtttcccaacccaaaagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttttc 724032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 2334626 - 2334840
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatct------------cttc 105  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||   |||            ||||    
T  2334626 tacaatgtttcccaacccaagagaactctaatcaaataccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctcaccttc 2334725  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcac-aattggtcaaattgtgacacgattgatgcatacgacccaaggta 204  Q
    ||||||||||||| |||||||| ||| ||||||||||  ||| |||  |||||||   ||   ||||| ||| |||||||||||  ||||||||||||||    
T  2334726 aaaatctgcaaag-aacacttatatagcagtcttcag-cgtcgaaatcgtgtcacgtttttcccaaatcgtgtcacgattgatgtgtacgacccaaggta 2334823  T
Q  205 cgaccaaccttatcctg 221  Q
    |||||||||||||||||    
T  2334824 cgaccaaccttatcctg 2334840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 22 - 221
Target Start/End: Original strand, 36988288 - 36988498
Alignment:
Q  22 atgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tct-cttcaaaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||        ||||   ||| ||||||||    
T  36988288 atgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagtttctctctcttcaagctctccttcaaaa 36988387  T
Q  110 tctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaatt--ggtcaaattgtgacacgattgatgcatacgacccaaggtacga 207  Q
    | ||||||| |||||||| ||| ||||||||||  |||||||  |||||||| ||    || ||| ||| ||| |||||||| |||||||||||||||||    
T  36988388 tatgcaaag-aacacttatatagcagtcttcag-cgtcaaaatcgtgtcacattttccatc-aatcgtgtcacaattgatgcgtacgacccaaggtacga 36988484  T
Q  208 ccaaccttatcctg 221  Q
    ||||||||||||||    
T  36988485 ccaaccttatcctg 36988498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 14634035 - 14634121
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||||||||| ||||||||||||||| |||||||||  ||||||||| |||||||||||||||||||||| ||||||    
T  14634035 tacaatgtttcccaacccaaaagaactctaatcaaaaaccctcaactctaaagttacctcctttgatttcccaagttttcttctctt 14634121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 34139980 - 34140066
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||||||||||||||||||||||||||||||  |||||| ||||||||| ||||||||||| |||||||||| ||||||    
T  34139980 tacaatgtttcccaacccaagagaactctaatcaaagactttcaaccctaaagttacctcctttgattttccaagttttcctctctt 34140066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 17 - 91
Target Start/End: Complemental strand, 38312200 - 38312126
Alignment:
Q  17 atacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaa 91  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  38312200 atacaatgtttcccaacccaagagaactctaatcaaagaacctcaaccctaaagttacctcctttgatttcccaa 38312126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 45099714 - 45099637
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  45099714 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagttt 45099637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 20522559 - 20522693
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||  ||| |||| || || ||||||||  |||||||  |||  |||||||||||||||||| ||| |||||||||||    
T  20522559 cttcaaaatctgcagaagaacacttttatagcagtttttagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaag 20522658  T
Q  202 gtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||||||| ||||||||| ||||    
T  20522659 gtacgaccaaccttatcctgaaaacgtgcccagca 20522693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 4503341 - 4503418
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||| ||| |||| ||||||| | ||||||||||||||||||||    
T  4503341 tacaatgtttcccaacccaagagaactctaatcaaagaacctaaaccctaaagttgcttcctttgatttcccaagttt 4503418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5723463 - 5723540
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||  |||| ||||||| | ||||||||||||||||||||    
T  5723463 tacaatgtttcccaacccaagagaactctaatcaaagaccccaaaccctaaagttgcctcctttgatttcccaagttt 5723540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 17057578 - 17057737
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tct-cttc 105  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||||||||| || ||        ||||   ||| ||||    
T  17057578 tacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttacctccgttgatttccaaattttctctctcttcaaactctccttc 17057677  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattgg 166  Q
    ||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||| |||||    
T  17057678 aaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaaatgtgtcacgattgg 17057737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 17085561 - 17085720
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtt--------ttca---tct-cttc 105  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||||||||| || ||        ||||   ||| ||||    
T  17085561 tacaatatttcccaacccaagagaactctaatcaaagaccttcaaccctaaagttacctccgttgatttccaaattttctctctcttcaaactctccttc 17085660  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattgg 166  Q
    ||||||||||||| |||||||| ||| |||||||||| ||||||||||||||||| |||||    
T  17085661 aaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaaatgtgtcacgattgg 17085720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 33162659 - 33162736
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||| |||| |||| ||||||||||||||||||||    
T  33162659 tacaatgtttcccaactcaagagaaccctaatcaaagaccctcaaccctaaaattacctcctttgatttcccaagttt 33162736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 36205876 - 36205949
Alignment:
Q  22 atgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  36205876 atgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagttt 36205949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 101 - 236
Target Start/End: Original strand, 33118471 - 33118606
Alignment:
Q  101 tcttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 200  Q
    ||||||||||||||| |  |||||||| ||| |||||||||||||||||||  ||||||   |||  ||||| |||||||||||| ||| ||||||||||    
T  33118471 tcttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcatgtttgtccaaatcgtgacacgattggtgcgtacgacccaa 33118570  T
Q  201 ggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||| ||||||||||| || ||| ||||| ||||    
T  33118571 ggtacggccaaccttatcttgaaaatgtgcccagca 33118606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 33528384 - 33528258
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||||||| ||||  |||||||  |||  ||||| |||||||||||| ||| |||||||||||    
T  33528384 cttcaaaatctgcacaagaacacttatatagcagtcttcagttgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 33528285  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||| ||||||||| ||| ||||||    
T  33528284 gtacgatcaaccttattctgaaaacgt 33528258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 34389188 - 34389313
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||| |||||||||||| ||| |||||||||||    
T  34389188 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttc-caaatcgtgacacgattggtgcgtacgacccaag 34389286  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  34389287 gtacgaccaaccttatcctgaaaacgt 34389313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 6595215 - 6595292
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||||||| ||||||    
T  6595215 tacaatttttcccagcccaagagaactctaatcaaagaccctcaaccctaaagttacctcatttgatttcctaagttt 6595292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 4484539 - 4484617
Alignment:
Q  18 tacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| || ||||||  |||||||||||||||||||    
T  4484539 tacaatgtttcccaacccaagagaagctctaatcaaagaccctaaaccctagagttactccctttgatttcccaagttt 4484617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 236
Target Start/End: Original strand, 21630282 - 21630416
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    ||||||||||| || |  |||||||| ||| ||||||| || ||||||||  |||||||  |||  ||||| |||||||||||| ||  ||||||||||     
T  21630282 cttcaaaatctacacaagaacacttatatagcagtctttagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgtgtacgacccaaa 21630381  T
Q  202 gtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||||||||||||||||||| ||||||||| ||||    
T  21630382 gtacgaccaaccttatcctgaaaacgtgcccagca 21630416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 29867828 - 29867751
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||  | |||||| | |||||||| || ||||||    
T  29867828 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaacccaatagttaccttctttgattcccaaagttt 29867751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 39483235 - 39483339
Alignment:
Q  124 cttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgta 223  Q
    |||| ||| |||||||||| |||||||| |||| |||  |||  ||||| |||||||||||| ||| || |||||||||||||||||||||||||||| |    
T  39483235 cttatatagcagtcttcagctgtcaaaattgtgccacgtttgtccaaatcgtgacacgattggtgcgtaagacccaaggtacgaccaaccttatcctgaa 39483334  T
Q  224 aacgt 228  Q
    |||||    
T  39483335 aacgt 39483339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 23078231 - 23078106
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||  |||||||| ||||||||  ||   ||||| ||| |||||||| ||| |||||||||||    
T  23078231 cttcaaaatctgcacaagaacacttatatagcagtcttcaactgtcaaaattgtgtcacgttttc-caaatcgtggcacgattggtgcgtacgacccaag 23078133  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
     ||||||||||||||||||| ||||||    
T  23078132 atacgaccaaccttatcctgaaaacgt 23078106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 36773491 - 36773431
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  36773491 caagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttccctagttt 36773431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 12123797 - 12123871
Alignment:
Q  21 aatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||| ||||||||||||| |||||||| |||||| ||||||||| | |||||||||  |||||||    
T  12123797 aatgtttcccaacctaagagaactctaaccaaagaccatcaaccttaaagttacctactttgatttttcaagttt 12123871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 28258872 - 28258814
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  28258872 caaatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaac 28258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 30833305 - 30833227
Alignment:
Q  18 tacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||| || ||||||||||| ||||| |||| || ||||||  |||||||||||||||||||    
T  30833305 tacaatgtttcccaacccaagataagctctaatcaaaaaccctaaaccctagagttactccctttgatttcccaagttt 30833227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 2837149 - 2837272
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    ||||||||| | ||||||| |||||| ||| |||||||||| ||||||||  |||| ||  ||   |||||  ||||||| ||| ||| |||||||||||    
T  2837149 cttcaaaatttacaaagaa-cacttatatagcagtcttcagctgtcaaaatcgtgttacgttttcccaaatcatgacacgtttggtgcgtacgacccaag 2837247  T
Q  202 gtacgaccaaccttatcctgtaaac 226  Q
    |||||||||||||||||||| ||||    
T  2837248 gtacgaccaaccttatcctgaaaac 2837272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 5723626 - 5723677
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||| ||| |||||||||||| |||||||||||||||||||||||||||||||    
T  5723626 aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcctg 5723677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 8389909 - 8389790
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| || |||||||| ||| |||||||||| | ||||||  ||||||   ||   |||||  ||||| ||||| ||| |||||||||||    
T  8389909 cttcaaaatctgcacaggaacacttaaataacagtcttcagctatcaaaatcgtgtcatgtttttccaaatcatgacatgattggtgcgtacgacccaag 8389810  T
Q  202 gtacgaccaaccttatcctg 221  Q
    ||||| ||||||||||||||    
T  8389809 gtacgtccaaccttatcctg 8389790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 101 - 220
Target Start/End: Complemental strand, 10707013 - 10706895
Alignment:
Q  101 tcttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 200  Q
    ||||||||||||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  ||   ||||  ||| |||||||| ||  ||||||||||    
T  10707013 tcttcaaaatctgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgttttc-caaaccgtggcacgattggtgtgtacgacccaa 10706915  T
Q  201 ggtacgaccaaccttatcct 220  Q
    ||||||||||||||||||||    
T  10706914 ggtacgaccaaccttatcct 10706895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 177 - 228
Target Start/End: Original strand, 17865589 - 17865640
Alignment:
Q  177 acacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  17865589 acacgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 17865640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 32289528 - 32289454
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||| |||||||||||| |||||||||||||| || |||| || ||||||  |||||||||||||||||||    
T  32289528 atgtttccaaacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttcccaagttt 32289454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 102 - 231
Target Start/End: Complemental strand, 14698769 - 14698640
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    ||||||||||| || |  |||||||| ||| |||||||||  | ||||||  |||||||  |||  ||||| |||| | | ||| ||| |||||||||||    
T  14698769 cttcaaaatctacacaagaacacttatatagcagtcttcaactatcaaaatcgtgtcacgtttgtccaaatcgtgaaatggttggtgcgtacgacccaag 14698670  T
Q  202 gtacgaccaaccttatcctgtaaacgtgcc 231  Q
    |||||||||||||||||||| ||| |||||    
T  14698669 gtacgaccaaccttatcctgaaaatgtgcc 14698640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 11067234 - 11067174
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||  |||||||||||  |||||||||||||||| |||||||||||||| |||||    
T  11067234 caagagaaccttaatcaaagacaatcaaccataaagttacctcctttgatttccctagttt 11067174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 221
Target Start/End: Original strand, 13569671 - 13569785
Alignment:
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    |||||||||| |  |||||||| |||  ||||||||| ||||||||  |||||| | ||   ||||| |||||||||||| ||| ||||| |||||||||    
T  13569671 aaaatctgcacaagaacacttatatagtagtcttcagctgtcaaaatcgtgtcaaatttttccaaatcgtgacacgattggtgcttacgatccaaggtac 13569770  T
Q  206 gaccaaccttatcctg 221  Q
    || |||||||||||||    
T  13569771 ga-caaccttatcctg 13569785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 173 - 240
Target Start/End: Original strand, 40015314 - 40015381
Alignment:
Q  173 tgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgcc 240  Q
    |||| |||||||||||| ||||| |||||||||||||||| ||||| || ||||||| ||| ||||||    
T  40015314 tgtgtcacgattgatgcttacgatccaaggtacgaccaacattatcatgaaaacgtgtcaatcatgcc 40015381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 24885620 - 24885583
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaaga 55  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  24885620 tacaatgtttcccaacccatgagaactctaatcaaaga 24885583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 97
Target Start/End: Original strand, 7815523 - 7815574
Alignment:
Q  45 ctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttc 97  Q
    |||||||||||||||||||| ||||||||| ||| |||||||| |||||||||    
T  7815523 ctaatcaaagaccctcaaccctaaagttacctcc-ttgatttctcaagttttc 7815574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 95
Target Start/End: Complemental strand, 11049474 - 11049419
Alignment:
Q  39 agaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||| ||||||||||||| |||||| |||| |||| ||||||||||||||||||||    
T  11049474 agaaccctaatcaaagaccatcaaccctaaa-ttacctcctttgatttcccaagttt 11049419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 38312103 - 38312040
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattgg 166  Q
    ||||||||||||||||| |||||||| ||| |||||||||| ||||||||  ||||||| |||||    
T  38312103 cttcaaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaatcgtgtcacgattgg 38312040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 4503504 - 4503555
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||| ||| ||| |||||||| ||||| |||||||||||||||||||||||||    
T  4503504 aatcgtgccacaattgatgcgtacgatccaaggtacgaccaaccttatcctg 4503555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 45099543 - 45099500
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| |||||  ||||||||||||||||||||||||    
T  45099543 cacgattgatgcgtacgattcaaggtacgaccaaccttatcctg 45099500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 8040305 - 8040385
Alignment:
Q  18 tacaatgtttcccaaccc--aagagaactctaat-caaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||  |||||||||  | | ||||||| ||||||||||||||||| |||||||  || ||||||||    
T  8040305 tacaatgtttcccaaccctcaagagaacttcactacaaagacactcaaccataaagttacctcctttgtattaccaagttt 8040385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 17865446 - 17865511
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccataaagttacgtcctttg 82  Q
    |||||||||||||||||||||||| ||  | | ||||||| ||||||| ||||||||| |||||||    
T  17865446 tacaatgtttcccaacccaagagatcttcactacaaagacactcaaccctaaagttacctcctttg 17865511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 231
Target Start/End: Original strand, 35447477 - 35447534
Alignment:
Q  174 gtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgcc 231  Q
    |||||||| ||| ||| ||||||||||||||||| |||||||||| || |||| ||||    
T  35447477 gtgacacgtttggtgcgtacgacccaaggtacgagcaaccttatcttgaaaacttgcc 35447534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 151
Target Start/End: Complemental strand, 39284748 - 39284700
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaa 151  Q
    ||||||||||||||||| |||||||| ||| |||||||||| ||||||||    
T  39284748 cttcaaaatctgcaaag-aacacttatatagcagtcttcagctgtcaaaa 39284700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 95
Target Start/End: Complemental strand, 41586401 - 41586328
Alignment:
Q  23 tgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||| |||||||||||||| |||| | ||||||| ||||||| ||||||||| || | |||||| ||||||||    
T  41586401 tgttttccaacccaagagaagctctcaccaaagacactcaaccctaaagttacatcatctgatttaccaagttt 41586328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 40015166 - 40015230
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttg 82  Q
    ||||||||||||||||||||||||||   |||  || || ||||||| ||||||||| |||||||    
T  40015166 tacaatgtttcccaacccaagagaacctcaatacaaaacactcaaccctaaagttacctcctttg 40015230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 7e-36; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 102 - 238
Target Start/End: Complemental strand, 21272749 - 21272613
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||| ||||| |||||  ||||||| ||| ||| ||||| |||||    
T  21272749 cttcaaaaactgcaaagaaacacttatatagcagtcttcagttgtcaaaattgtgtcacgattggccaaatcttgacacggttggtgcgtacgatccaag 21272650  T
Q  202 gtacgaccaaccttatcctgtaaacgtgccaagcatg 238  Q
    ||| |||||||||||||||| ||||||||||| ||||    
T  21272649 gtatgaccaaccttatcctgaaaacgtgccaaacatg 21272613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 28137617 - 28137703
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||| |||||||||| ||||||    
T  28137617 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccctaaagttaactcctttgattttccaagttttcctctctt 28137703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 18 - 221
Target Start/End: Original strand, 33160562 - 33160777
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttc-atctct------------t 104  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||| |||||||||||  |||||            |    
T  33160562 tacaatgtttcccaacccaagagaactctaatcaaagactctcaaccctaaagttacctcctttgattccccaagttttctctctcttccagctctccat 33160661  T
Q  105 caaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaatt--ggtcaaattgtgacacgattgatgcatacgacccaagg 202  Q
    |||||||||||||| |||||||| ||| ||||||||||  ||||||| ||||||||  ||    || ||| ||| |||||||||||| |||||||||| |    
T  33160662 caaaatctgcaaag-aacacttatatagcagtcttcag-cgtcaaaattgtgtcacgttttccatc-aatcgtgtcacgattgatgcgtacgacccaatg 33160758  T
Q  203 tacgaccaaccttatcctg 221  Q
    |||||||||||||||||||    
T  33160759 tacgaccaaccttatcctg 33160777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 9183240 - 9183317
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  9183240 tacaatgtttcccaacccaggagaactctaatcaaagaccctcaaccctaaagttacctcctttgatttcccaagttt 9183317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 33211394 - 33211471
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||||||||||||    
T  33211394 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaactgtaaagttacctcctttgatttcccaagttt 33211471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 101 - 233
Target Start/End: Complemental strand, 24435733 - 24435601
Alignment:
Q  101 tcttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaa 200  Q
    |||||||||| |||||| ||||||||| ||| |||||||||  |||||||   ||||||| ||||| ||||| |||||||| ||| ||| ||| ||||||    
T  24435733 tcttcaaaatttgcaaacaaacacttatatagcagtcttcaactgtcaaattcgtgtcacgattggccaaatcgtgacacggttggtgcgtacaacccaa 24435634  T
Q  201 ggtacgaccaaccttatcctgtaaacgtgccaa 233  Q
    ||||||||||||||||||||| |||||||||||    
T  24435633 ggtacgaccaaccttatcctgaaaacgtgccaa 24435601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 16567165 - 16567079
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||  |||||||||||||||||||||| ||||||    
T  16567165 tacaatgtttccaaacccaagagaactctaatcaaagacccttaaccctaaagttaactcctttgatttcccaagttttcctctctt 16567079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 26954494 - 26954580
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||||||||| |||| |||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||| ||||||    
T  26954494 tacaatgtttcccaacctaagataactctaatcaaagactctcaaccctaaagttacctcctttgatttcccaagttttcctctctt 26954580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 5017256 - 5017137
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| | |||||||| ||||||||  |||||||| ||  |||||| |||||||||||| ||| |||||||||||    
T  5017256 cttcaaaatctgcacaagaacacttatatagcggtcttcagctgtcaaaatcgtgtcacattttttcaaatcgtgacacgattggtgcgtacgacccaag 5017157  T
Q  202 gtacgaccaaccttatcctg 221  Q
    ||||||||||||||||||||    
T  5017156 gtacgaccaaccttatcctg 5017137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Complemental strand, 16569002 - 16568916
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    |||||||||||| ||||||||||||||||||||||||||||| |||| |||| |||  |||||||||||||||||||||| ||||||    
T  16569002 tacaatgtttccaaacccaagagaactctaatcaaagacccttaaccctaaatttaattcctttgatttcccaagttttcctctctt 16568916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 18234420 - 18234546
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||| ||||| |  |||||||| ||| |||||||||| ||||||||  |||||||  |||  ||||| |||||||||||| ||| |||||||||||    
T  18234420 cttcaaaaactgcacaagaacacttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 18234519  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  18234520 gtacgaccaaccttatcctgaaaacgt 18234546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5406407 - 5406484
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  5406407 tacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagttt 5406484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5410732 - 5410809
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  5410732 tacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagttt 5410809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 5413601 - 5413678
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||| ||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  5413601 tacaatgtttcccaacccgagagaactctaatcaaagaccctaaaccctaaagttgcctcctttgatttcccaagttt 5413678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 31404882 - 31404960
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatc-aaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||| |||||||||||||||||||||| ||||||||| |||| ||||||| | ||||||||||||||||||||    
T  31404882 tacaatgttttccaacccaagagaactctaatcaaaagaccctaaaccctaaagttgcctcctttgatttcccaagttt 31404960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 16452538 - 16452615
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||| |||||||||||||||||||||||||||||| |||  ||||||| | | ||||||||||||||||||    
T  16452538 tacaatgtttctcaacccaagagaactctaatcaaagaccctaaactctaaagttgcttactttgatttcccaagttt 16452615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 30834745 - 30834822
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||| |||||||||||||||||||||||||||| | |||| ||||||| | |||||||||||| |||||||    
T  30834745 tacaatgtttctcaacccaagagaactctaatcaaagaccataaaccctaaagttgcttcctttgatttctcaagttt 30834822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 102 - 221
Target Start/End: Complemental strand, 31086234 - 31086114
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattg-gtcaaattgtgacacgattgatgcatacgacccaa 200  Q
    |||||||||||||| |  |||||||| ||| |||||||||| | ||||||  |||||||  ||  | ||||| |||||||||||| ||| ||||||||||    
T  31086234 cttcaaaatctgcacaagaacacttatatagcagtcttcagctatcaaaatcgtgtcacgtttttgccaaatcgtgacacgattggtgcgtacgacccaa 31086135  T
Q  201 ggtacgaccaaccttatcctg 221  Q
    |||||||||||||||||||||    
T  31086134 ggtacgaccaaccttatcctg 31086114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 104 - 236
Target Start/End: Original strand, 31979851 - 31979988
Alignment:
Q  104 tcaaaatctgcaaagaaa-cacttacatat----cagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgaccc 198  Q
    |||||||||| ||||||| |||||| ||||    ||||||||| |||||||||  |||||||  |||  ||||| |||||||||||| ||| |||||| |    
T  31979851 tcaaaatctggaaagaaaacacttatatatatagcagtcttcaattgtcaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgactc 31979950  T
Q  199 aaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    || |||||||||||||||||||| ||||||||| ||||    
T  31979951 aaagtacgaccaaccttatcctgaaaacgtgcccagca 31979988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 169 - 240
Target Start/End: Original strand, 26954674 - 26954745
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagcatgcc 240  Q
    |||| |||||||| ||||||| ||||||||||||||||||||||||||||||| ||| ||| ||||||||||    
T  26954674 aaatcgtgacacggttgatgcgtacgacccaaggtacgaccaaccttatcctgaaaatgtgtcaagcatgcc 26954745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 2171739 - 2171817
Alignment:
Q  18 tacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||| ||||||||||||||||| |||| || |||| |  |||||||||||||||||||    
T  2171739 tacaatgtttcccaacccaagagaaactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagttt 2171817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 102 - 228
Target Start/End: Complemental strand, 10076951 - 10076825
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  ||||  || ||| || ||||||| |||||||   |||||||  |||  ||||| |||||||||||| ||| |||||||||||    
T  10076951 cttcaaaatctgcacaagaacatatatatagcaatcttcagctgtcaaagtcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 10076852  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  10076851 gtacgaccaaccttatcctgaaaacgt 10076825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 169 - 236
Target Start/End: Original strand, 9183381 - 9183448
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||| ||| |||||||||||| ||||||||||||||||||||||||||||||| |||| |||| ||||    
T  9183381 aaatcgtgtcacgattgatgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagca 9183448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 226
Target Start/End: Original strand, 22964037 - 22964159
Alignment:
Q  103 ttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaagg 202  Q
    |||||||||||||||||| |||||| ||| ||||||||||  |||||||  |||||||  ||   |||||||||||||| |||  || |||||  |||||    
T  22964037 ttcaaaatctgcaaagaa-cacttatatagcagtcttcagccgtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaagg 22964135  T
Q  203 tacgaccaaccttatcctgtaaac 226  Q
    ||||||||||||||||||| ||||    
T  22964136 tacgaccaaccttatcctgaaaac 22964159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 103 - 226
Target Start/End: Complemental strand, 23824356 - 23824234
Alignment:
Q  103 ttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaagg 202  Q
    |||||||||||||||||| |||||| ||| ||||||||||  |||||||  |||||||  ||   |||||||||||||| |||  || |||||  |||||    
T  23824356 ttcaaaatctgcaaagaa-cacttatatagcagtcttcagccgtcaaaatcgtgtcacgttttcccaaattgtgacacgtttggcgcgtacgatacaagg 23824258  T
Q  203 tacgaccaaccttatcctgtaaac 226  Q
    ||||||||||||||||||| ||||    
T  23824257 tacgaccaaccttatcctgaaaac 23824234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 5413828 - 5413871
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  5413828 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctg 5413871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 178 - 221
Target Start/End: Original strand, 16452820 - 16452863
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  16452820 cacgattgatgcgtacgacccaaggtacgaccaaccttatcctg 16452863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 3072965 - 3073039
Alignment:
Q  22 atgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||| |||||||||||||| || |||| || |||| |  |||||||||||||||||||    
T  3072965 atgtttcccaacccaagagaagctctaatcaaagactctaaaccctagagtttctccctttgatttcccaagttt 3073039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 5406570 - 5406620
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 220  Q
    ||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  5406570 aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcct 5406620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 170 - 220
Target Start/End: Original strand, 5410895 - 5410945
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcct 220  Q
    ||| ||| |||||||||||| ||||||||||||||||||||||||||||||    
T  5410895 aatcgtgccacgattgatgcgtacgacccaaggtacgaccaaccttatcct 5410945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 5757173 - 5757115
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| |||||||||| ||||||||| ||||||||||||||||||||||| ||||    
T  5757173 caaatcgtgccacgattgatacatacgaccaaaggtacgaccaaccttatcctgaaaac 5757115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Original strand, 3039142 - 3039202
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagtttt 96  Q
    ||||| ||| |||||||||||||||||||| ||||||||| |||||||| ||||||||||||    
T  3039142 caagaaaaccctaatcaaagaccctcaaccctaaagttacctcctttga-ttcccaagtttt 3039202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 5407288 - 5407328
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatc 218  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  5407288 cacgattgatgcgtacgacccaaggtacgaccaaccttatc 5407328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 178 - 218
Target Start/End: Original strand, 5411613 - 5411653
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatc 218  Q
    |||||||||||| ||||||||||||||||||||||||||||    
T  5411613 cacgattgatgcgtacgacccaaggtacgaccaaccttatc 5411653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 181 - 221
Target Start/End: Original strand, 16452712 - 16452752
Alignment:
Q  181 gattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  16452712 gattgatgcgtacgacccaaggtacgaccaaccttatcctg 16452752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 236
Target Start/End: Complemental strand, 5571957 - 5571890
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    |||| ||| |||||||| ||| |||||||||||||||||||||||||| |||  ||||||||| ||||    
T  5571957 aaatcgtgtcacgattggtgcgtacgacccaaggtacgaccaaccttaacctaaaaacgtgcccagca 5571890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 30834909 - 30834960
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||| ||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  30834909 aatcgtgccacgattgatgcgtacgatccaaggtacgaccaaccttatcctg 30834960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 31405046 - 31405097
Alignment:
Q  170 aattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||| ||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  31405046 aatcgtgccacgattgatgcgtacgacctaaggtacgaccaaccttatcctg 31405097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 169 - 226
Target Start/End: Original strand, 23896736 - 23896793
Alignment:
Q  169 aaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||| ||| |||||||||| | ||||||| ||||||||||||||||||||||| ||||    
T  23896736 aaatcgtgccacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaac 23896793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 26661506 - 26661470
Alignment:
Q  191 tacgacccaaggtacgaccaaccttatcctgtaaacg 227  Q
    ||||||||||||||||||||||||||||||| |||||    
T  26661506 tacgacccaaggtacgaccaaccttatcctgaaaacg 26661470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 227
Target Start/End: Complemental strand, 26767477 - 26767441
Alignment:
Q  191 tacgacccaaggtacgaccaaccttatcctgtaaacg 227  Q
    ||||||||||||||||||||||||||||||| |||||    
T  26767477 tacgacccaaggtacgaccaaccttatcctgaaaacg 26767441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 226
Target Start/End: Original strand, 3809320 - 3809355
Alignment:
Q  191 tacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||||||||||||||||||||||||||||| ||||    
T  3809320 tacgacccaaggtacgaccaaccttatcctgaaaac 3809355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 22 - 95
Target Start/End: Original strand, 6097645 - 6097720
Alignment:
Q  22 atgtttcccaacccaagaga-actctaatcaaaga-ccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||| |||||| |||||||||||||| |||| |||| || |||| |  |||||||||||||||||||    
T  6097645 atgtttcccaaccaaagagatactctaatcaaagaaccctaaaccctagagttgctccctttgatttcccaagttt 6097720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 30 - 95
Target Start/End: Complemental strand, 412057 - 411991
Alignment:
Q  30 caacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||| |||||||||||||| || |||| || ||||||  ||||||||||| |||||||    
T  412057 caacccaagagaagctctaatcaaagactctaaaccctagagttactccctttgatttctcaagttt 411991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 82
Target Start/End: Complemental strand, 5757334 - 5757269
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaat-caaagaccctcaaccataaagttacgtcctttg 82  Q
    |||||||||||||||||||||||| |   ||| ||||||| ||||||| ||||||||| |||||||    
T  5757334 tacaatgtttcccaacccaagagatcctaaatacaaagacactcaaccctaaagttacctcctttg 5757269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 220
Target Start/End: Complemental strand, 21593222 - 21593194
Alignment:
Q  192 acgacccaaggtacgaccaaccttatcct 220  Q
    |||||||||||||||||||||||||||||    
T  21593222 acgacccaaggtacgaccaaccttatcct 21593194  T

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Target: scaffold0066 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 18 - 217
Target Start/End: Original strand, 20624 - 20834
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt-----tcatct-------cttc 105  Q
    |||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| ||||||     || |||       ||||    
T  20624 tacaatgtctcccaacccaagataactctaatcaaagaccctcaaccctaaagttacctcctttgatttccaaagtttctctctcttctagctctccttc 20723  T
Q  106 aaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaaggtac 205  Q
    ||||||||||||| |||||||| ||| |||| ||||| | ||||||  |||| ||  || | ||||| |||||||| ||  ||| |||||||||||||||    
T  20724 aaaatctgcaaag-aacacttatataacagttttcagctatcaaaatcgtgttacgttttgccaaatcgtgacacgtttagtgcgtacgacccaaggtac 20822  T
Q  206 gaccaaccttat 217  Q
    ||||||||||||    
T  20823 gaccaaccttat 20834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 228
Target Start/End: Original strand, 6022 - 6148
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||| ||| ||| |||||||||| ||||||||  |||||||  |||  |||||||||||||||||| ||| |||||||||||    
T  6022 cttcaaaatctgcacaagaacatttatatagcagtcttcagctgtcaaaatcgtgtcacgtttgtccaaattgtgacacgattggtgcgtacgacccaag 6121  T
Q  202 gtacgaccaaccttatcctgtaaacgt 228  Q
    |||||||||||||||||||| ||||||    
T  6122 gtacgaccaaccttatcctgaaaacgt 6148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 18 - 104
Target Start/End: Original strand, 149306 - 149392
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttttcatctctt 104  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||| |||||||||    
T  149306 tacaatgtttctcaacctaagagaactctaatcaaagaccctcaacccacaagttacctcctttgatttcccaagttgtcatctctt 149392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 2830 - 2954
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcacaattggtcaaattgtgacacgattgatgcatacgacccaag 201  Q
    |||||||||||||| |  |||||||| ||| |||||||||| ||| ||||  |||||||  |||  ||||| |||||||||||| ||| |||||||||||    
T  2830 cttcaaaatctgcacaagaacacttatatagcagtcttcagctgttaaaatcgtgtcacgtttgtccaaatcgtgacacgattggtgcgtacgacccaag 2929  T
Q  202 gtacgaccaaccttatcctgtaaac 226  Q
    |||||||||||||||||||| ||||    
T  2930 gtacgaccaaccttatcctgaaaac 2954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 132974 - 132916
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  132974 caaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 132916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 95
Target Start/End: Complemental strand, 876 - 799
Alignment:
Q  18 tacaatgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |  |||||||||||||||||||    
T  876 tacaatgtttcccaacccaagagaactctaatcaaagaccctaaaccctaaagttgctgcctttgatttcccaagttt 799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 22 - 95
Target Start/End: Complemental strand, 434488 - 434415
Alignment:
Q  22 atgtttcccaacccaagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    |||||| ||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||||||||||||||    
T  434488 atgttttccaacccaagagaactctaatcaaagaccctaaaccctaaagttgcttcctttgatttcccaagttt 434415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 434321 - 434278
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||||||| |||| ||||| |||||||||||||||||||||||||    
T  434321 cacgatttatgcgtacgatccaaggtacgaccaaccttatcctg 434278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 8944 - 9022
Alignment:
Q  18 tacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||| ||||||||||||||||| || | || ||||||  |||||||||||||||||||    
T  8944 tacaatgtttcccaacccaagagaagctctaatcaaagaccctaaagcctagagttactccctttgatttcccaagttt 9022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 18 - 95
Target Start/End: Original strand, 11370 - 11448
Alignment:
Q  18 tacaatgtttcccaacccaagagaa-ctctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||||||||| ||||||||||||||| | |||| || ||||||  |||||||||||||||||||    
T  11370 tacaatgtttcccaacccaagagaagctctaatcaaagaccataaaccctagagttactccctttgatttcccaagttt 11448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 35 - 95
Target Start/End: Complemental strand, 114532 - 114472
Alignment:
Q  35 caagagaactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||| |||||||||||||||||||| ||||||||| |||||||||||| |||||||    
T  114532 caagagaaccctaatcaaagaccctcaaccctaaagttacctcctttgatttctcaagttt 114472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 221
Target Start/End: Complemental strand, 114374 - 114331
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctg 221  Q
    ||||| |||||| ||||||||||||||| |||||||||||||||    
T  114374 cacgagtgatgcgtacgacccaaggtaccaccaaccttatcctg 114331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 168 - 226
Target Start/End: Complemental strand, 43656 - 43598
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  43656 caaatcgtgccacgattgatacatacgacccaaggtacgaccaaccttatcctgaaaac 43598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 36527 - 36467
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    ||||| ||| || ||||| ||| ||||||||||||||||||||||||||||||| ||||||    
T  36527 caaatcgtgccatgattggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacgt 36467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 236
Target Start/End: Original strand, 80871 - 80939
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||| |||||||| ||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||    
T  80871 caaatcgtgacacgtttggtgcgtacgacccaaggtacgaccaaccttatcctgaaaacttgcccagca 80939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 167 - 226
Target Start/End: Complemental strand, 8113 - 8054
Alignment:
Q  167 tcaaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||||| ||| |||||||||| | ||||||||||||||||||||||||||||||| ||||    
T  8113 tcaaatcgtgtcacgattgatacgtacgacccaaggtacgaccaaccttatcctgaaaac 8054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 168 - 236
Target Start/End: Complemental strand, 11138 - 11070
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgtgccaagca 236  Q
    ||||| |||||||| ||| ||| |||||||||| |||||||||||||||||||| |||| |||| ||||    
T  11138 caaatcgtgacacgtttggtgcgtacgacccaatgtacgaccaaccttatcctgaaaacttgcccagca 11070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 95
Target Start/End: Complemental strand, 22280 - 22226
Alignment:
Q  41 aactctaatcaaagaccctcaaccataaagttacgtcctttgatttcccaagttt 95  Q
    ||||||||||||||||||| |||| || |||| |  |||||||||||||||||||    
T  22280 aactctaatcaaagaccctaaaccctagagttgctccctttgatttcccaagttt 22226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 168 - 226
Target Start/End: Original strand, 45601 - 45659
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    ||||| ||| ||||||||||   ||||||||||||||||||||||||||||||| ||||    
T  45601 caaatcgtgtcacgattgatatgtacgacccaaggtacgaccaaccttatcctgaaaac 45659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 178 - 226
Target Start/End: Complemental strand, 1295 - 1247
Alignment:
Q  178 cacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaac 226  Q
    |||||||||| | ||||||| ||||||||||||||||||||||| ||||    
T  1295 cacgattgatacgtacgaccgaaggtacgaccaaccttatcctgaaaac 1247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0466 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 168 - 228
Target Start/End: Complemental strand, 6907 - 6847
Alignment:
Q  168 caaattgtgacacgattgatgcatacgacccaaggtacgaccaaccttatcctgtaaacgt 228  Q
    ||||| |||||| | ||| ||| ||||||||||||||| ||||||||||||||| ||||||    
T  6907 caaatcgtgacatggttggtgcgtacgacccaaggtacaaccaaccttatcctgaaaacgt 6847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 160
Target Start/End: Original strand, 86020 - 86078
Alignment:
Q  102 cttcaaaatctgcaaagaaacacttacatatcagtcttcagttgtcaaaaatgtgtcac 160  Q
    |||||||||||||| |  |||||||| ||| |||||||||||||||||||  |||||||    
T  86020 cttcaaaatctgcacaagaacacttatatagcagtcttcagttgtcaaaatcgtgtcac 86078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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