View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6698_low_95 (Length: 232)
Name: NF6698_low_95
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6698_low_95 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 16 - 232
Target Start/End: Original strand, 2089543 - 2089759
Alignment:
| Q |
16 |
aaaattaatgcaattaattacctctttgtccaagcaacatgcaaaaggggctaagcatttgagcaacatgtgaccacaatttattatataatcgtacaca |
115 |
Q |
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| T |
2089543 |
aaaattaatgcaattaattacctctttgtccaagcaacatgcaaaaggggctaagcatttgagcaacaagtgaccacaatttattatataatcgtacaca |
2089642 |
T |
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| Q |
116 |
cttgggtcgtaggataccattccaaaatttgtgccgttgccattgaattcgtagtagtagaaatatagaagatttctaaacttgaaaaatgcaactccac |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
2089643 |
cttgggtcgtaggataccattccaaaatttgtgccgttgccattgaattcatagtagtagaaatatagaaggtttctaaacttgaaaaatgcaactccac |
2089742 |
T |
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| Q |
216 |
cataagagttaaaggac |
232 |
Q |
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||||||||||||||||| |
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| T |
2089743 |
cataagagttaaaggac |
2089759 |
T |
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