View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6698_low_98 (Length: 229)

Name: NF6698_low_98
Description: NF6698
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6698_low_98
NF6698_low_98
[»] chr8 (22 HSPs)
chr8 (8-229)||(10014370-10014591)
chr8 (50-209)||(9256428-9256587)
chr8 (50-209)||(13152371-13152530)
chr8 (43-209)||(30791428-30791594)
chr8 (49-209)||(27190810-27190970)
chr8 (43-192)||(16532604-16532750)
chr8 (26-209)||(21958551-21958737)
chr8 (58-209)||(14446871-14447022)
chr8 (50-217)||(28846650-28846803)
chr8 (48-209)||(24333753-24333917)
chr8 (48-182)||(32359488-32359622)
chr8 (50-179)||(40145987-40146116)
chr8 (50-209)||(10467803-10467949)
chr8 (48-182)||(32342882-32343016)
chr8 (48-182)||(32355369-32355503)
chr8 (76-184)||(34228232-34228340)
chr8 (91-182)||(32372024-32372115)
chr8 (69-209)||(42446957-42447104)
chr8 (50-177)||(2826283-2826407)
chr8 (60-123)||(24592324-24592387)
chr8 (48-86)||(10396423-10396461)
chr8 (89-134)||(3435399-3435444)
[»] chr5 (13 HSPs)
chr5 (20-209)||(203889-204081)
chr5 (50-191)||(22712876-22713017)
chr5 (48-209)||(22541925-22542086)
chr5 (50-209)||(27168780-27168939)
chr5 (48-206)||(2228957-2229115)
chr5 (50-200)||(23244547-23244697)
chr5 (50-209)||(3055521-3055680)
chr5 (51-209)||(11852754-11852912)
chr5 (104-209)||(1280417-1280522)
chr5 (48-209)||(26540629-26540791)
chr5 (101-182)||(19518970-19519051)
chr5 (50-198)||(8785832-8785980)
chr5 (48-112)||(1280717-1280781)
[»] scaffold0019 (1 HSPs)
scaffold0019 (16-209)||(134794-134990)
[»] chr7 (16 HSPs)
chr7 (16-217)||(26493653-26493860)
chr7 (26-209)||(38575238-38575425)
chr7 (48-209)||(27387281-27387442)
chr7 (43-209)||(19400017-19400183)
chr7 (51-181)||(14088815-14088945)
chr7 (51-181)||(14398833-14398963)
chr7 (50-209)||(23179861-23180021)
chr7 (50-209)||(9230440-9230597)
chr7 (48-192)||(45197699-45197843)
chr7 (49-192)||(8638670-8638815)
chr7 (48-181)||(25491609-25491742)
chr7 (48-131)||(25024640-25024723)
chr7 (50-126)||(26782291-26782367)
chr7 (26-124)||(10224015-10224116)
chr7 (148-209)||(43728035-43728096)
chr7 (50-199)||(18375455-18375602)
[»] chr6 (9 HSPs)
chr6 (20-229)||(3050882-3051090)
chr6 (20-209)||(11970999-11971190)
chr6 (20-209)||(24074451-24074643)
chr6 (60-209)||(12180512-12180661)
chr6 (50-209)||(32441951-32442108)
chr6 (48-201)||(1296556-1296709)
chr6 (50-209)||(25599191-25599353)
chr6 (71-209)||(25340484-25340621)
chr6 (50-192)||(30621229-30621362)
[»] chr1 (21 HSPs)
chr1 (20-209)||(35948923-35949114)
chr1 (50-209)||(48606589-48606748)
chr1 (50-191)||(40864696-40864837)
chr1 (50-206)||(14498939-14499095)
chr1 (50-209)||(30558982-30559141)
chr1 (53-209)||(9637160-9637316)
chr1 (50-209)||(30054860-30055019)
chr1 (48-181)||(17874845-17874978)
chr1 (50-206)||(25017428-25017584)
chr1 (48-209)||(26272904-26273065)
chr1 (50-209)||(52753797-52753953)
chr1 (55-209)||(32379838-32379991)
chr1 (99-209)||(21973814-21973924)
chr1 (48-123)||(170424-170500)
chr1 (43-131)||(11843869-11843957)
chr1 (138-209)||(17127478-17127549)
chr1 (26-124)||(41753076-41753177)
chr1 (89-134)||(33489817-33489862)
chr1 (89-134)||(41972267-41972312)
chr1 (48-113)||(51053104-51053169)
chr1 (91-143)||(28463200-28463252)
[»] chr4 (16 HSPs)
chr4 (50-209)||(31944655-31944814)
chr4 (50-209)||(53693011-53693170)
chr4 (26-209)||(55464610-55464796)
chr4 (50-200)||(3074417-3074567)
chr4 (48-209)||(12211201-12211362)
chr4 (20-182)||(8897870-8898035)
chr4 (138-209)||(27364922-27364993)
chr4 (50-209)||(4325451-4325609)
chr4 (26-192)||(42843763-42843935)
chr4 (55-182)||(10632626-10632755)
chr4 (48-123)||(25182854-25182929)
chr4 (50-123)||(1147624-1147697)
chr4 (63-179)||(3240266-3240380)
chr4 (50-86)||(20114527-20114563)
chr4 (20-68)||(6255346-6255397)
chr4 (89-125)||(48130098-48130134)
[»] chr2 (16 HSPs)
chr2 (50-202)||(12539619-12539771)
chr2 (48-206)||(33453163-33453321)
chr2 (43-209)||(35649632-35649796)
chr2 (20-220)||(34907613-34907813)
chr2 (48-209)||(19951807-19951967)
chr2 (47-131)||(13309706-13309790)
chr2 (20-113)||(1954964-1955060)
chr2 (48-209)||(22483588-22483749)
chr2 (48-209)||(22464709-22464871)
chr2 (48-209)||(34526391-34526553)
chr2 (48-175)||(7886633-7886758)
chr2 (48-182)||(26656316-26656450)
chr2 (146-209)||(13308755-13308818)
chr2 (63-182)||(18425947-18426070)
chr2 (50-113)||(31392931-31392994)
chr2 (50-121)||(42477459-42477530)
[»] chr3 (15 HSPs)
chr3 (48-208)||(53710438-53710598)
chr3 (50-209)||(51262018-51262177)
chr3 (48-209)||(31989068-31989229)
chr3 (48-209)||(43137166-43137326)
chr3 (50-177)||(24988790-24988917)
chr3 (48-182)||(22934774-22934908)
chr3 (91-209)||(3856894-3857012)
chr3 (48-192)||(37381844-37381988)
chr3 (73-209)||(24908393-24908529)
chr3 (48-131)||(51408584-51408667)
chr3 (43-209)||(43585856-43586014)
chr3 (110-209)||(15668012-15668111)
chr3 (50-123)||(9743393-9743466)
chr3 (89-123)||(5135410-5135444)
chr3 (92-124)||(38282531-38282563)
[»] scaffold0007 (1 HSPs)
scaffold0007 (48-209)||(259957-260118)
[»] scaffold0002 (1 HSPs)
scaffold0002 (51-209)||(435326-435486)
[»] scaffold0015 (1 HSPs)
scaffold0015 (26-209)||(214111-214297)
[»] scaffold0726 (1 HSPs)
scaffold0726 (50-177)||(954-1081)
[»] scaffold0178 (1 HSPs)
scaffold0178 (50-217)||(17769-17936)
[»] scaffold0168 (1 HSPs)
scaffold0168 (48-209)||(15853-16015)
[»] scaffold0012 (1 HSPs)
scaffold0012 (48-209)||(197144-197306)
[»] scaffold0198 (1 HSPs)
scaffold0198 (50-209)||(1435-1594)
[»] scaffold0170 (1 HSPs)
scaffold0170 (26-163)||(9161-9301)


Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 8 - 229
Target Start/End: Original strand, 10014370 - 10014591
Alignment:
Q  8 gacatcatatatatcaagataaaagaggatcttcatttttacaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaata 107  Q
    ||||| ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  10014370 gacataatatatatcaagataaaagaggatcgtcgtttttacaaaagtacagtttgaaataagagagatgaaatataatatgtcaataatgtgctaaata 10014469  T
Q  108 aaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaac 207  Q
    |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10014470 aaattaggaggtaaatgccctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaac 10014569  T
Q  208 atcatcaagtgacaaaataaat 229  Q
    ||||||||||||||||||||||    
T  10014570 atcatcaagtgacaaaataaat 10014591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 9256587 - 9256428
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||||||| ||| | | | |||||| || ||    
T  9256587 aaaagtacaatttgaaataagagagatgaaacataacttgtcaatagtgtgctaaataaaattaggaggtaaatgtcatttgcgagacctctttgcgatg 9256488  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| |||| ||||||||||||||||||||| ||||||||| ||||||| ||||||||    
T  9256487 aatgttcgaattatatcaacatcatcaagtgacttgaatatctcccgctcgatgtaacat 9256428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 13152371 - 13152530
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    |||| |||| ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||| |||||||||| ||||||| | | |||||| || ||    
T  13152371 aaaactacaatttgaaataagagagatgaaacataacttgtcaatagtgtgctaaataaaattaggaggtaaatgccctttccgagacctctttgcgatg 13152470  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| |||||||| |||||||||||| |||| ||||||||| ||||||| ||||||||    
T  13152471 aatgttggaataataccaacatcatcaaatgacttgaatatctcccgctcgatgtaacat 13152530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 43 - 209
Target Start/End: Original strand, 30791428 - 30791594
Alignment:
Q  43 tttttacaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctt 142  Q
    |||| |||||| |||| |||||| |||||||||||||||||||  ||||||||  |||||||||||||||| | |||||||| ||||||| | | |||||    
T  30791428 ttttaacaaaattacaatttgaattaagagagatgaaatataacctgtcaatagcgtgctaaataaaattaggtggtaaatgccctttccgagacctctt 30791527  T
Q  143 tccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    | ||||||||||| ||||||||||||  |||||||||||| ||||||||| ||||||||||||||||    
T  30791528 tgcggtgaatgttcgaataatatcaatgtcatcaagtgacttgaatatctcccgctcggtgtaacat 30791594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 49 - 209
Target Start/End: Complemental strand, 27190970 - 27190810
Alignment:
Q  49 caaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggt 148  Q
    ||||| |||| ||||||||||||||||||||| |||| ||| ||||| ||| ||||||||||||| |||||||||||||||||  | |  ||||| ||||    
T  27190970 caaaaatacaatttgaaataagagagatgaaacataacttgccaatagtgtactaaataaaattaggaggtaaatgtcctttctgagacatctttgcggt 27190871  T
Q  149 gaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||| || || ||||||||||||||||||||||| ||||||||| ||||| |||| |||||    
T  27190870 gaatattcgagtaatatcaacatcatcaagtgacttgaatatctcccgctaggtgcaacat 27190810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 43 - 192
Target Start/End: Original strand, 16532604 - 16532750
Alignment:
Q  43 tttttacaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctt 142  Q
    |||| |||||| |||| ||||||||||||||  ||||||||||   | |||||  |||||||||||||||| |||||||||| ||||||| | |||||||    
T  16532604 ttttaacaaaaatacaatttgaaataagaga--tgaaatataaccag-caatagcgtgctaaataaaattaggaggtaaatgccctttccgatatctctt 16532700  T
Q  143 tccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatct 192  Q
    | |||||||||||||||||||||||||||||||||||||| |||||||||    
T  16532701 tgcggtgaatgtttgaataatatcaacatcatcaagtgacttgaatatct 16532750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 209
Target Start/End: Complemental strand, 21958737 - 21958551
Alignment:
Q  26 ataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaa 122  Q
    |||||||||| |||||||||||   ||||||||||| ||| |||||||| |||||||||||||  || |||||  |||||||||||||||| ||||||||    
T  21958737 ataaaagaggttcttcattttttcaacaaaagtacaattttaaataagaaagatgaaatataacctgccaatagcgtgctaaataaaattaggaggtaaa 21958638  T
Q  123 tgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |  |||||||   | ||||||   || |||||| ||||||||||||||||||||||||||  |||||||| | ||||||||||||||    
T  21958637 ttccctttccgcgacctcttttgagttaatgttcgaataatatcaacatcatcaagtgactcgaatatctcctgctcggtgtaacat 21958551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 58 - 209
Target Start/End: Complemental strand, 14447022 - 14446871
Alignment:
Q  58 agtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttg 157  Q
    ||||||| |||||||||||||||| |||    |||||| ||||||||||||||||| ||||| |||||||||||| | | |||||| | ||||||||| |    
T  14447022 agtttgacataagagagatgaaatgtaaccgatcaatagtgtgctaaataaaattaggaggtgaatgtcctttccgagacctctttgcagtgaatgttag 14446923  T
Q  158 aataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||||||||||||||||||||||| |||||||||  | || ||||||||||    
T  14446922 aataatatcaacatcatcaagtgacttgaatatctctctcttggtgtaacat 14446871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 217
Target Start/End: Complemental strand, 28846803 - 28846650
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||| ||||| |||||| | ||||||||||||||||||||||||||||             | |||| |||||    
T  28846803 aaaagtacaatttgaaataagagagatgaaacataatctgtcaaaagtgtgctaaataaaattatgaggtaaatg-------------ccctttgcggtg 28846717  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacatcatcaagt 217  Q
    |||||| |||||||||||||||||||||||||| ||||||||| ||||||| ||| ||||||||||||    
T  28846716 aatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcgatgt-acatcatcaagt 28846650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 24333917 - 24333753
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| ||||||||||||||||||||| ||||   ||||||| ||||||||||||||| |||||||||||   |||||| | | ||||||  ||    
T  24333917 acaaaagtacaatttgaaataagagagatgaaacataaccggtcaatagtgtgctaaataaaatcatgaggtaaattctctttccgagacctctttgtgg 24333818  T
Q  148 tg---aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||   |||||| ||||||||| |||||||||||||||| ||||||||| |||||| |||||||||    
T  24333817 tgaataatgttcgaataatattaacatcatcaagtgacttgaatatctcccgctcagtgtaacat 24333753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 32359622 - 32359488
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    |||||| |||| ||||||||||||||||||||||||||| |  ||||| ||||||||||||||||| |||||||||| | |||   | | |||||| | |    
T  32359622 acaaaactacaatttgaaataagagagatgaaatataatctaccaatagtgtgctaaataaaattaggaggtaaatgacatttttgagacctctttgcag 32359523  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgac 182  Q
    |||||||| ||||||||||||||||||||||||||    
T  32359522 tgaatgttcgaataatatcaacatcatcaagtgac 32359488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 50 - 179
Target Start/End: Original strand, 40145987 - 40146116
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||| ||||| ||||||||||||||||| ||||| || ||||| ||||||||||||||||| |||||| ||| | ||||| | | ||||||   |||    
T  40145987 aaaagtatagtttaaaataagagagatgaaacataatctgccaatagtgtgctaaataaaattaggaggtagatgccatttccgagacctctttgttgtg 40146086  T
Q  150 aatgtttgaataatatcaacatcatcaagt 179  Q
    |||||| |||||||||||||||||||||||    
T  40146087 aatgttcgaataatatcaacatcatcaagt 40146116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 10467949 - 10467803
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||              | ||||||| ||    
T  10467949 aaaagtacaatttgaaataagagagatgaaacataacttgtcaatattgtgctaaataaaattatgaggtaaat-------------accctttccgatg 10467863  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
     ||||| ||||||||||||||||||||| |||| ||| ||||| ||||||| ||||||||    
T  10467862 catgttcgaataatatcaacatcatcaaatgacttgattatctcccgctcgatgtaacat 10467803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 32343016 - 32342882
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    |||||| |||| ||||||||||||||||||||||||||  |  ||||  ||||||||||||||||| |||||||||| |||||   | | || ||| | |    
T  32343016 acaaaactacaatttgaaataagagagatgaaatataacataccaatggtgtgctaaataaaattaggaggtaaatgacctttttgagacctttttgcag 32342917  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgac 182  Q
    |||||||| ||||||||||||||||||||||||||    
T  32342916 tgaatgttcgaataatatcaacatcatcaagtgac 32342882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 182
Target Start/End: Complemental strand, 32355503 - 32355369
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    |||||| |||| ||||||||||||||||||||||||||  |  ||||  ||||||||||||||||| |||||||||| |||||   | | || ||| | |    
T  32355503 acaaaactacaatttgaaataagagagatgaaatataacataccaatggtgtgctaaataaaattaggaggtaaatgacctttttgagacctttttgcag 32355404  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgac 182  Q
    |||||||| ||||||||||||||||||||||||||    
T  32355403 tgaatgttcgaataatatcaacatcatcaagtgac 32355369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 76 - 184
Target Start/End: Original strand, 34228232 - 34228340
Alignment:
Q  76 tgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatc 175  Q
    ||||||||||  ||||||||||||| |||||||||| | ||||||||||   ||||||| | ||||||  ||| |||||| |||||||||||||||||||    
T  34228232 tgaaatataacatgtcaataatgtgataaataaaatgaggaggtaaatgcaatttccaagacctctttgtggtaaatgttcgaataatatcaacatcatc 34228331  T
Q  176 aagtgacat 184  Q
    |||||||||    
T  34228332 aagtgacat 34228340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 91 - 182
Target Start/End: Complemental strand, 32372115 - 32372024
Alignment:
Q  91 caataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgac 182  Q
    ||||| ||||||||||||||||| |||||||||| |||||   | | |||||| ||||||||||| ||||||||||||||||||||||||||    
T  32372115 caatagtgtgctaaataaaattaggaggtaaatgacctttttgagacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgac 32372024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 209
Target Start/End: Complemental strand, 42447104 - 42446957
Alignment:
Q  69 agagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctcttt--ccggtgaatgtt-tg----aata 161  Q
    ||||||||||||||||| |||||| || ||||||||||||||||| ||||||||||   ||| | | | || |||   ||||||||||| ||    ||||    
T  42447104 agagagatgaaatataacttgtcattagtgtgctaaataaaattaggaggtaaatgcatttttcgatacctttttacacggtgaatgttatgttcaaata 42447005  T
Q  162 atatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||| ||| |||||||||||| ||||||||||||||||| ||||||||    
T  42447004 atataaacgtcatcaagtgacttgaatatcttccgctcgatgtaacat 42446957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 2826283 - 2826407
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| |||||||||||||| |||| ||||||  | || ||| ||||||||||||||||   || |||||| || | || | | |||||| |||||    
T  2826283 aaaagtacaatttgaaataagagacatgacatataacatatccatagtgtgctaaataaaatt---agataaatgcccatgccgatacctctttgcggtg 2826379  T
Q  150 aatgtttgaataatatcaacatcatcaa 177  Q
    |||||| ||||||||||||||| |||||    
T  2826380 aatgttcgaataatatcaacattatcaa 2826407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 60 - 123
Target Start/End: Original strand, 24592324 - 24592387
Alignment:
Q  60 tttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaat 123  Q
    ||||||||||||||||||||| ||||  || ||||| ||||||||||||||||| |||||||||    
T  24592324 tttgaaataagagagatgaaacataacctgccaatagtgtgctaaataaaattaggaggtaaat 24592387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 48 - 86
Target Start/End: Original strand, 10396423 - 10396461
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataat 86  Q
    ||||||||||| ||| |||||||||||||||||||||||    
T  10396423 acaaaagtacaatttaaaataagagagatgaaatataat 10396461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 3435444 - 3435399
Alignment:
Q  89 gtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaa 134  Q
    ||||||| ||||||||||||| ||| |||||||||||| |||||||    
T  3435444 gtcaatagtgtgctaaataaagttaggaggtaaatgtcttttccaa 3435399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 135; Significance: 2e-70; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 204081 - 203889
Alignment:
Q  20 atcaagataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatga 116  Q
    ||||| ||||||||| ||| ||||||||   |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  204081 atcaaaataaaagagaatcgtcattttttctacaaaagtacagtttgaaataagagagatgaaatataatttgtcaatagtgtgctaaataaaattagga 203982  T
Q  117 ggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||||||||||| | | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  203981 ggtaaatgtcctttccgagacctctttccggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacat 203889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 22712876 - 22713017
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| |||||||||||||||||| || ||||  || ||||| ||||||||||||||||| ||||||||||  |||||  | | |||||| |||||    
T  22712876 aaaagtacaatttgaaataagagagatgtaacataacatgacaatagtgtgctaaataaaattaggaggtaaatgctctttctgagacctctttgcggtg 22712975  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatc 191  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  22712976 aatgtttgaataatatcaacatcatcaagtgacatgaatatc 22713017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 22542086 - 22541925
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| |||||||||||||||| |||||||||  || |||||  ||||||||||||||||||||||||||| |||||||   | |||||||  |    
T  22542086 acaaaagtacaatttgaaataagagagaagaaatataacctgacaatagcgtgctaaataaaattatgaggtaaatgccctttccgcgacctctttcgag 22541987  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
     ||||||| ||||||||| ||||||||| |||||| ||||||||||||| ||| ||||||||    
T  22541986 ggaatgttcgaataatattaacatcatcgagtgacttgaatatcttccgttcgatgtaacat 22541925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 27168780 - 27168939
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||| | ||||||||||||||||||||| ||||     ||||| ||||||||||||||||| |||||||||| |||||   | | ||| || |||||    
T  27168780 aaaagtataatttgaaataagagagatgaaacataaccatccaatagtgtgctaaataaaattaggaggtaaatgccctttatgagacctcatttcggtg 27168879  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||    
T  27168880 aatgttcgaataatatcaacattatcaagtgacttgaatatctcccgctcggtgtaacat 27168939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 206
Target Start/End: Complemental strand, 2229115 - 2228957
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||| | ||||||||||||||||||||||||||  |  |||||  |||||||||||||||| |||||||||| |||| | | || |||||| ||     
T  2229115 acaaaagtataatttgaaataagagagatgaaatataacctaccaatagcgtgctaaataaaattaggaggtaaatgcccttcctagaacctctttgcga 2229016  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaa 206  Q
    ||||||||  |||||||||||||||||||| |||| | |||||||||||||| ||||||    
T  2229015 tgaatgttcaaataatatcaacatcatcaaatgacttaaatatcttccgctcagtgtaa 2228957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 50 - 200
Target Start/End: Original strand, 23244547 - 23244697
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||| |||| ||||||||||||  ||||| ||| ||||||  | | ||| || ||||     
T  23244547 aaaagtacaatttgaaataagagagatgaaatataatctgtcaatagtgtggtaaataaaattagcaggtacatgccctttctgagacctcgttgcggtt 23244646  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcg 200  Q
    ||||||  |||||||||||||||||||||||||  ||||| ||||||||||    
T  23244647 aatgttcaaataatatcaacatcatcaagtgactagaataacttccgctcg 23244697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 3055680 - 3055521
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||| |||||||||| |||||| |||| ||||||||| ||||||||||||||||| |||||||||| | |||   | | ||| || ||  |    
T  3055680 aaaagtacaatttaaaataagagatatgaaacataaattgtcaatagtgtgctaaataaaattaggaggtaaatgccatttatgagacctcattgcgcgg 3055581  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| ||||||||||||||||||||| |||| ||||||||| ||||||| ||||||||    
T  3055580 aatgttcgaataatatcaacatcatcaaatgacttgaatatctcccgctcgatgtaacat 3055521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 11852912 - 11852754
Alignment:
Q  51 aaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtga 150  Q
    |||||||| || |||||||||||||||||| |||||||||||||| |||||||||||||||||  ||||||||   |||||  | | ||||||  | | |    
T  11852912 aaagtacaattcgaaataagagagatgaaagataatttgtcaatagtgtgctaaataaaattagaaggtaaatactctttcttagacctctttgtgttaa 11852813  T
Q  151 atgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||| |||||||||||||||||||||||||  | ||||||| ||| ||||||||||||    
T  11852812 atgttcgaataatatcaacatcatcaagtgagttaaatatctcccgttcggtgtaacat 11852754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 104 - 209
Target Start/End: Complemental strand, 1280522 - 1280417
Alignment:
Q  104 aataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtg 203  Q
    |||||||||| |||||||||| | ||||| | | |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||    
T  1280522 aataaaattaggaggtaaatgccttttccgagacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtg 1280423  T
Q  204 taacat 209  Q
    ||||||    
T  1280422 taacat 1280417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 26540629 - 26540791
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaa-taatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccg 146  Q
    |||||| |||| |||||| ||||||| ||| ||||| |  |||||| ||  |||||| ||||||||| |||||||||| ||||||  | || ||||| ||    
T  26540629 acaaaattacaatttgaagtaagagatatggaatattacatgtcaaatagcgtgctagataaaattaggaggtaaatgccctttctgagatttctttgcg 26540728  T
Q  147 gtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||||||| ||||||||||||  |||||||||||  ||||||||| ||||||||||||||||    
T  26540729 gtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacat 26540791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 101 - 182
Target Start/End: Original strand, 19518970 - 19519051
Alignment:
Q  101 ctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgac 182  Q
    ||||||||||||| | |||||||| ||||||||| | |||||| ||||||||||| ||||||||||||||||||||||||||    
T  19518970 ctaaataaaattaggtggtaaatgacctttccaatacctctttgcggtgaatgttcgaataatatcaacatcatcaagtgac 19519051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 50 - 198
Target Start/End: Complemental strand, 8785980 - 8785832
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    |||| |||| || |||||||||||||||||| ||||  |||||||||| ||||||||||||||| |||||||    ||||| | | | || ||| |||||    
T  8785980 aaaactacaattggaaataagagagatgaaacataacctgtcaataatatgctaaataaaattaggaggtaagaacccttttcgagacctatttgcggtg 8785881  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgct 198  Q
    |||||| |||||||||||| |||||||| |||  ||||||||| |||||    
T  8785880 aatgttcgaataatatcaatatcatcaactgaattgaatatctcccgct 8785832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 48 - 112
Target Start/End: Complemental strand, 1280781 - 1280717
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaatt 112  Q
    ||||||||||| ||| |||||||||| |||||||||||  || ||||| ||| ||||||||||||    
T  1280781 acaaaagtacaatttaaaataagagatatgaaatataacctgccaatattgttctaaataaaatt 1280717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 16 - 209
Target Start/End: Original strand, 134794 - 134990
Alignment:
Q  16 atatatcaagataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaatt 112  Q
    ||||||||| ||||||||||||| ||||||||   ||||||||||||||||||||||||||||||||||||||  | ||||||  |||||||||||||||    
T  134794 atatatcaaaataaaagaggatcgtcattttttctacaaaagtacagtttgaaataagagagatgaaatataacctatcaatagcgtgctaaataaaatt 134893  T
Q  113 atgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    | |||||||||| ||||||| | | |||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  134894 aggaggtaaatgccctttccgagacctctttccggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacat 134990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 115; Significance: 1e-58; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 115; E-Value: 1e-58
Query Start/End: Original strand, 16 - 217
Target Start/End: Original strand, 26493653 - 26493860
Alignment:
Q  16 atatatcaagataaaagaggatcttcattttt---acaaaagtacag-tttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaat 111  Q
    ||||||||| ||||||||||||| ||||||||   |||||||||||| ||||||||||||||||||||||||||  ||||||||  ||||||||||||||    
T  26493653 atatatcaaaataaaagaggatcgtcattttttctacaaaagtacaggtttgaaataagagagatgaaatataacctgtcaatagcgtgctaaataaaat 26493752  T
Q  112 tatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaac--at 209  Q
    || |||||||||| ||||||| | | |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||  ||    
T  26493753 taggaggtaaatgccctttccgagacctctttacggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacgtat 26493852  T
Q  210 catcaagt 217  Q
    ||||||||    
T  26493853 catcaagt 26493860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 38575238 - 38575425
Alignment:
Q  26 ataaaagaggatcttcattttt----acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaa 121  Q
    |||||||||| || ||||||||    |||||||||||  || |||||||| |||||||||||||  ||||||||  |||||||||||||||| |||||||    
T  38575238 ataaaagaggttcatcatttttttcaacaaaagtacaacttaaaataagaaagatgaaatataacctgtcaatagcgtgctaaataaaattaggaggtaa 38575337  T
Q  122 atgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||| ||||||   | |||||||  ||||||||| |||||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  38575338 atgttctttccgcgacctctttcgagtgaatgttcgaataatatcaacatcatcaagtgactttaatatctcccgctcggtgtaacat 38575425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 27387281 - 27387442
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    |||||||||||  || |||||||| |||||||||||||  ||||||||  |||||||||||||||| ||||||||||  ||||||   | |||||||  |    
T  27387281 acaaaagtacaacttaaaataagaaagatgaaatataacctgtcaatagcgtgctaaataaaattaggaggtaaatgctctttccgcgacctctttcgag 27387380  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  27387381 tgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacat 27387442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 43 - 209
Target Start/End: Complemental strand, 19400183 - 19400017
Alignment:
Q  43 tttttacaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctt 142  Q
    |||| ||||||||||| ||| |||||||| |||||||||||||  || |||||  |||||||||||||||| |||||||||  |||||||   | |||||    
T  19400183 ttttaacaaaagtacaattttaaataagaaagatgaaatataacctgccaatagcgtgctaaataaaattaggaggtaaataccctttccgcgacctctt 19400084  T
Q  143 tccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||  ||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  19400083 tcgagtgaatgttcgaataatatcaacatcatcaagcgacttgaatatctcccgctcggtgtaacat 19400017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 14088945 - 14088815
Alignment:
Q  51 aaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtga 150  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||| | ||||| | | |||||| || ||     
T  14088945 aaagtacaatttgaaataagagatatgaaatataacttgtcaatagtgtgctaaataaaattaggaggtaaatgccttttccgagacctctttgcgatgg 14088846  T
Q  151 atgtttgaataatatcaacatcatcaagtga 181  Q
    ||||||||||||||||| |||||||||||||    
T  14088845 atgtttgaataatatcagcatcatcaagtga 14088815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 51 - 181
Target Start/End: Complemental strand, 14398963 - 14398833
Alignment:
Q  51 aaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtga 150  Q
    |||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| |||||||||| | ||||| | | |||||| || ||     
T  14398963 aaagtacaatttgaaataagagatatgaaatataacttgtcaatagtgtgctaaataaaattaggaggtaaatgccttttccgagacctctttgcgatgg 14398864  T
Q  151 atgtttgaataatatcaacatcatcaagtga 181  Q
    ||||||||||||||||| |||||||||||||    
T  14398863 atgtttgaataatatcagcatcatcaagtga 14398833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 23179861 - 23180021
Alignment:
Q  50 aaaagtacagtttgaaataagagaga--tgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||| | ||||||||||||||||  ||||| |||| ||||||||| |||||||||| |||||| ||| |||||| ||||||||| | |||||| |||    
T  23179861 aaaagtataatttgaaataagagagagatgaaacataacttgtcaatagtgtgctaaattaaattaggag-taaatgccctttccaagacctctttgcgg 23179959  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||| ||||||||||||||| |||||||| | |||||||||  |||||||||||||||    
T  23179960 tgaatgttcgaataatatcaacattatcaagtgccttgaatatctctcgctcggtgtaacat 23180021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 9230597 - 9230440
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||  ||||| |||  ||||||||| ||||||||||||||||| |||||||||| ||||| | | | |||||| || ||    
T  9230597 aaaagtacaatttgaaataagaga--tgaaacataccttgtcaatagtgtgctaaataaaattaggaggtaaatgcccttttcgatacctctttgcgatg 9230500  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| ||||||||||||||||||||| |||| ||| ||||| ||||||  ||||||||    
T  9230499 aatgttcgaataatatcaacatcatcaaatgacttgagtatctcccgctctatgtaacat 9230440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 192
Target Start/End: Complemental strand, 45197843 - 45197699
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| ||||||||||||||||||||||||||  |  |||||  |||||||||||||||| || ||||||| |||  || | | ||||||  ||    
T  45197843 acaaaagtacaatttgaaataagagagatgaaatataacctaccaatagggtgctaaataaaattaggatgtaaatgccctccccgagacctctttgtgg 45197744  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatct 192  Q
    |||||||| ||| |||||||||||| ||||||||| |||||||||    
T  45197743 tgaatgttcgaacaatatcaacatcgtcaagtgacttgaatatct 45197699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 49 - 192
Target Start/End: Complemental strand, 8638815 - 8638670
Alignment:
Q  49 caaaagtacagtttgaaataagagagatg-aaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttcc-aaaatctctttccg 146  Q
    |||||||||| |||||||||||||||||| ||| |||| ||| | ||| ||||||||||||||||| |||||||||| ||||||| | |  |||||| ||    
T  8638815 caaaagtacaatttgaaataagagagatggaaacataacttgccgatagtgtgctaaataaaattaggaggtaaatgccctttccgagaccctctttgcg 8638716  T
Q  147 gtgaatgtttgaataatatcaacatcatcaagtgacatgaatatct 192  Q
     |||||||| |||||||||| | |||||||| |||| |||||||||    
T  8638715 ttgaatgttcgaataatatcgatatcatcaaatgacttgaatatct 8638670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 48 - 181
Target Start/End: Original strand, 25491609 - 25491742
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| |||||||||||||| |||||||||||  |||||||| |||| |||||||||| | || ||||||| | |||   | | |||||| | |    
T  25491609 acaaaagtacaatttgaaataagagatatgaaatataacatgtcaatagtgtgataaataaaatcaggaagtaaatgccttttttgagacctctttacag 25491708  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtga 181  Q
    |||||||| |||||||||||||||||||||||||    
T  25491709 tgaatgttcgaataatatcaacatcatcaagtga 25491742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 131
Target Start/End: Complemental strand, 25024723 - 25024640
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttc 131  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||||||  |||| |||||||||| |||||||||| ||||||    
T  25024723 acaaaagtacaatttgaaataagagagatgaaatataacatgtcaataacatgcttaataaaattaggaggtaaatgccctttc 25024640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 50 - 126
Target Start/End: Original strand, 26782291 - 26782367
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtc 126  Q
    ||||||||| ||| ||||||||||| ||||| |||| ||||||||| ||||||||||||||||| ||||||||||||    
T  26782291 aaaagtacaatttaaaataagagagctgaaacataacttgtcaatagtgtgctaaataaaattaggaggtaaatgtc 26782367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 10224116 - 10224015
Alignment:
Q  26 ataaaagaggatcttcatttttacaa---aagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaa 122  Q
    |||||||||| ||||||||||  |||   || |||| ||||||||||||||||||||||||||| || | ||| |||| |||||||||||| ||||||||    
T  10224116 ataaaagaggttcttcattttgtcaataaaaatacaatttgaaataagagagatgaaatataatctgccgatagtgtggtaaataaaattaggaggtaaa 10224017  T
Q  123 tg 124  Q
    ||    
T  10224016 tg 10224015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 148 - 209
Target Start/End: Complemental strand, 43728096 - 43728035
Alignment:
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||||||||||||||||||||||||| |||| ||||||||| ||| ||| | ||||||    
T  43728096 tgaatgtttgaataatatcaacatcatcaactgacttgaatatctcccgttcgatataacat 43728035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 50 - 199
Target Start/End: Complemental strand, 18375602 - 18375455
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| |||||||||||||| |||||| ||||| |  ||| | ||||||||||  ||||| || ||||||| ||||| | | |   |||||   ||    
T  18375602 aaaagtacaatttgaaataagagaaatgaaacataatctaccaaaagtgtgctaaatcgaattaggaagtaaatgcccttttcgaga--cctttcgcatg 18375505  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctc 199  Q
    |||||| ||||||||||||||| ||| |||||  ||||||||| ||||||    
T  18375504 aatgttcgaataatatcaacattatctagtgatttgaatatctcccgctc 18375455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 107; Significance: 9e-54; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 20 - 229
Target Start/End: Complemental strand, 3051090 - 3050882
Alignment:
Q  20 atcaagataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatt--tgtcaataatgtgctaaataaaattat 114  Q
    ||||| ||||||||||||| ||||||||   |||||||||      |||||||||||||||||||||||    |||||||| |||||||||||||||||     
T  3051090 atcaaaataaaagaggatcgtcattttttctacaaaagta------gaaataagagagatgaaatataacccgtgtcaatagtgtgctaaataaaattag 3050997  T
Q  115 gaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacatcatca 214  Q
    | ||||||||  |||||| | | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  3050996 gtggtaaatgctctttccgagacctctttccggtgaatgtttgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacatcatca 3050897  T
Q  215 agtgacaaaataaat 229  Q
    |||||| ||||||||    
T  3050896 agtgactaaataaat 3050882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 11971190 - 11970999
Alignment:
Q  20 atcaagataaaagaggatcttcatttttacaa---aagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatga 116  Q
    |||||||||||||||| |  ||||||| ||||   ||||||| ||||||||||||||||||||| ||||  |||||||| ||||||||||||||||| ||    
T  11971190 atcaagataaaagaggtttgtcattttgacaattaaagtacaatttgaaataagagagatgaaacataacctgtcaatagtgtgctaaataaaattagga 11971091  T
Q  117 ggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||| ||||||  | | |||||| ||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  11971090 ggtaaatgccctttctgagacctcttt-cggtgaatgttcgcaaaatatcaacatcatcaagtgacttgaatatcttccgctcggtgtaacat 11970999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 20 - 209
Target Start/End: Complemental strand, 24074643 - 24074451
Alignment:
Q  20 atcaagataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatga 116  Q
    ||||| |||||||||| || ||||||||   ||||||||||| ||| ||||||||||||||||||||||| |||||| || |||||||||||||||| ||    
T  24074643 atcaaaataaaagagggtcgtcattttttctacaaaagtacaatttaaaataagagagatgaaatataatctgtcaaaaacgtgctaaataaaattagga 24074544  T
Q  117 ggtaaatgtcctttccaaaatctctttccgg-tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||||||| | |||| | | |||||||||| |||||||| ||||||||||||||||||||||| || ||||||||| || |||||||||||||    
T  24074543 ggtaaatgt-cattccgagacctctttccggttgaatgttcgaataatatcaacatcatcaagtaacttgaatatctccccctcggtgtaacat 24074451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 60 - 209
Target Start/End: Original strand, 12180512 - 12180661
Alignment:
Q  60 tttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaa 159  Q
    |||||||||||| |||||||| ||||  ||||||||||||||||||||||||||  ||||||||| |||| || | | |||||| ||||||||||| |||    
T  12180512 tttgaaataagaaagatgaaacataacctgtcaataatgtgctaaataaaattagaaggtaaatgcccttcccgagacctctttgcggtgaatgttcgaa 12180611  T
Q  160 taatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||||||||| ||||||||||| ||||| ||| || |||||||||||||    
T  12180612 taatatcaacaacatcaagtgacttgaatttctcccactcggtgtaacat 12180661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 32441951 - 32442108
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||| ||| |||| ||| ||||  ||||||||||||||||| |||||||||| ||||||| | | ||||||  | ||    
T  32441951 aaaagtacaatttgaaataagagagataaaacataacttgccaatggtgtgctaaataaaattaagaggtaaatgccctttccgatacctctttgggatg 32442050  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| ||||||||||||||||||||||||  || | ||||||||||||| ||||||||    
T  32442051 aatgttcgaataatatcaacatcatcaagtg--attattatcttccgctcgatgtaacat 32442108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 201
Target Start/End: Complemental strand, 1296709 - 1296556
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| |||||||||||| |||||||||||||  || | ||| |||| |||||||||| | |||||||||| ||||||| | | ||||||   |    
T  1296709 acaaaagtacaatttgaaataagatagatgaaatataacctgccgatagtgtggtaaataaaataaggaggtaaatggcctttccgagacctctttattg 1296610  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcgg 201  Q
    ||||| |||||||||||| || ||||||||||||| ||||||||| ||||||||    
T  1296609 tgaatatttgaataatattaatatcatcaagtgacttgaatatctcccgctcgg 1296556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 25599353 - 25599191
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttcc---g 146  Q
    ||||||||| ||| |||||||||||||||||||||| ||| ||||| |||| ||||| |||||| || ||||||| ||||||| | | |||||| |   |    
T  25599353 aaaagtacaattttaaataagagagatgaaatataacttgccaatagtgtgttaaatcaaattaggacgtaaatgccctttccgagacctctttgcgatg 25599254  T
Q  147 gtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
     |||||||| |||||||||||||||||||||||||| ||| ||||| || |||| ||||||||    
T  25599253 atgaatgttcgaataatatcaacatcatcaagtgacttgattatctcccactcgatgtaacat 25599191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 25340621 - 25340484
Alignment:
Q  71 agagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaaca 170  Q
    |||||||||| ||||| || ||||| |||| ||| |||||||| ||||||||||  |||||  | | ||||||  |||||||||| ||||||||||||||    
T  25340621 agagatgaaacataatctgccaatagtgtgttaa-taaaattaggaggtaaatgcactttctgagacctctttatggtgaatgttcgaataatatcaaca 25340523  T
Q  171 tcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||||||| | |||||||||| || ||||||||||    
T  25340522 tcatcaagtgacttaaatatcttccactgggtgtaacat 25340484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 50 - 192
Target Start/End: Complemental strand, 30621362 - 30621229
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||| ||| ||         |||| |||||||||||| |||||||||||||||||| | | ||||||| | ||    
T  30621362 aaaagtacaatttgaaataagagagatgaaacatacttg--------tgtgttaaataaaattaggaggtaaatgtcctttccgagacctctttc-gatg 30621272  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatct 192  Q
    |||||| |||||||||||||||||||||||||| ||| |||||    
T  30621271 aatgttcgaataatatcaacatcatcaagtgacttgattatct 30621229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 3e-50; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 209
Target Start/End: Original strand, 35948923 - 35949114
Alignment:
Q  20 atcaagataaaagaggatcttcattttt--acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgag 117  Q
    ||||| ||||||||||||| ||||||||  | || |||||||||||||||| ||||||||||||||||| | || |||  |||| ||||||||||| |||    
T  35948923 atcaaaataaaagaggatcgtcatttttctataatagtacagtttgaaatacgagagatgaaatataatctatctatagcgtgcaaaataaaattaggag 35949022  T
Q  118 gtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||||||||||||| | | |||||| ||||||||||| |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||    
T  35949023 gtaaatgtcctttccgagacctcttttcggtgaatgttcgaataacatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacat 35949114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 48606589 - 48606748
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||| ||||||||||||| ||||| || ||||| |||||||||||||||||||||||||||| |||||| || | |||||| |||||    
T  48606589 aaaagtacaatttgaaacaagagagatgaaacataatctgccaatagtgtgctaaataaaattatgaggtaaatgccctttcgaagacctctttgcggtg 48606688  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    | |||||||||||||||||||| ||||||| || ||||||||| ||||||||||||||||    
T  48606689 agtgtttgaataatatcaacattatcaagttacttgaatatctcccgctcggtgtaacat 48606748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 50 - 191
Target Start/End: Original strand, 40864696 - 40864837
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| |||||||||||||||||| || ||||  ||| |||| ||||||||||||||||| |||||||||| |||||| |||| |||||| |||||    
T  40864696 aaaagtacaatttgaaataagagagatgtaacataacctgttaatagtgtgctaaataaaattaggaggtaaatgccctttctaaaacctctttgcggtg 40864795  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatc 191  Q
    |||||| ||||||||||||||| |||||||||| ||||||||    
T  40864796 aatgttcgaataatatcaacattatcaagtgacttgaatatc 40864837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 50 - 206
Target Start/End: Complemental strand, 14499095 - 14498939
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||| |||  |||||| ||||| |||||||||||||||||  | | |||||| || ||    
T  14499095 aaaagtacaatttgaaataagagagatgaaacataacttgtcaatagtgttttaaatataattaggaggtaaatgtcctttctgagacctctttgcgatg 14498996  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaa 206  Q
    |||||| ||||||||||||||||||||| |||| ||||||||| ||||||| |||||    
T  14498995 aatgttcgaataatatcaacatcatcaaatgacttgaatatctcccgctcgatgtaa 14498939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 30558982 - 30559141
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||| ||||| |  ||||| ||||||||||||||||| ||||||||| || |||   | |||| ||| |||||    
T  30558982 aaaagtacaatttgaaataagagagatgaaacataatctaccaatagtgtgctaaataaaattaggaggtaaatatcatttatgagatctatttacggtg 30559081  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| ||||||||||| |||||||||||||| |||||||||  |||||||||||||||    
T  30559082 aatgttcgaataatatcagcatcatcaagtgacttgaatatctctcgctcggtgtaacat 30559141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 53 - 209
Target Start/End: Complemental strand, 9637316 - 9637160
Alignment:
Q  53 agtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaat 152  Q
    |||||| ||| ||| ||||||||||||| ||||  | |||||| ||||||||||||||||| || ||||||| ||||||| | | |||||| ||||||||    
T  9637316 agtacaatttaaaacaagagagatgaaacataacctatcaatagtgtgctaaataaaattaggatgtaaatgccctttccgagacctctttgcggtgaat 9637217  T
Q  153 gtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||  ||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  9637216 gttcaaataatatcaacatcatcaagtgacttgaatatcacccgctcggtgtaacat 9637160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 30055019 - 30054860
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||| ||||||||||||||||| ||||  |||||||||||||||||||||||||| |||||||||||| |||   | | |||||| ||| |    
T  30055019 aaaagtacaatttaaaataagagagatgaaacataacgtgtcaataatgtgctaaataaaattaggaggtaaatgtcatttatgatacctctttgcggag 30054920  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    || ||| ||||||| |||| || |||||||||| ||||||||| ||||||||||||||||    
T  30054919 aaggttcgaataatgtcaatatgatcaagtgacttgaatatctcccgctcggtgtaacat 30054860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 48 - 181
Target Start/End: Complemental strand, 17874978 - 17874845
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| ||| ||||||||||||||||||||||| |||||||| |||| ||||||||||||  |||||||||  |||| | | | |||||| |||    
T  17874978 acaaaagtacaatttaaaataagagagatgaaatataatctgtcaatagtgtggtaaataaaattagaaggtaaatgatcttttcgagacctctttgcgg 17874879  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtga 181  Q
    |||||||||||||||||||||||||||| |||||    
T  17874878 tgaatgtttgaataatatcaacatcatccagtga 17874845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 50 - 206
Target Start/End: Complemental strand, 25017584 - 25017428
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    |||| |||| ||||||||||||||||||  ||||||  |||||||| ||||||||||||||||| |||||| ||| ||||||  | | |||||| |||||    
T  25017584 aaaaatacaatttgaaataagagagatgtgatataacctgtcaatagtgtgctaaataaaattaggaggtatatgccctttctgagacctctttgcggtg 25017485  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaa 206  Q
    || ||| |||||||||||||||||||||||||  |||||||||  ||||||||||||    
T  25017484 aacgttcgaataatatcaacatcatcaagtgatttgaatatctctcgctcggtgtaa 25017428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 26272904 - 26273065
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| |||||||||||||| |||||||||||  || ||||| |||||||||||||||||  |||||| || ||||||| | | || ||| ||     
T  26272904 acaaaagtacaatttgaaataagagatatgaaatataacatgccaatagtgtgctaaataaaattagtaggtaattgccctttccgagacctgtttgcga 26273003  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||| ||||||||| |||||||||| ||||| ||||||||| | ||||| ||||||||    
T  26273004 tgaatgttcgaataatattaacatcatcacgtgacttgaatatctcctgctcgatgtaacat 26273065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 52753797 - 52753953
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||| ||||||||||||||||| |||| ||||||||| ||||||| ||||||||| |||||||||  ||||||| | | ||||||   | |    
T  52753797 aaaagtacaatttaaaataagagagatgaaacataacttgtcaatagtgtgctagataaaattaggaggtaaataccctttccgagacctcttt---gcg 52753893  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| ||||||||||||||||||||| |||| ||||||||| ||| ||| ||||||||    
T  52753894 aatgttcgaataatatcaacatcatcaaatgacttgaatatctcccgttcgatgtaacat 52753953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 209
Target Start/End: Original strand, 32379838 - 32379991
Alignment:
Q  55 tacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgt 154  Q
    |||| ||| ||||||||||| ||||  ||||  |||||||| ||||||||||||||||| |||||||||||| ||| | | | |||||| | || |||||    
T  32379838 tacaatttaaaataagagaggtgaatcataacctgtcaatagtgtgctaaataaaattaggaggtaaatgtcattttcgatacctctttgc-gtaaatgt 32379936  T
Q  155 ttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    | |||||||||||||||||||||||||  ||||||||| ||| | ||||||||||    
T  32379937 tcgaataatatcaacatcatcaagtgaattgaatatctcccgtttggtgtaacat 32379991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 99 - 209
Target Start/End: Original strand, 21973814 - 21973924
Alignment:
Q  99 tgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgct 198  Q
    ||||| ||||||||| |||||||||| ||||||| | || ||||| ||||||||||| ||||||||||||  |||||||||||  ||||||||| |||||    
T  21973814 tgctagataaaattaggaggtaaatgccctttccgagatttctttgcggtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcccgct 21973913  T
Q  199 cggtgtaacat 209  Q
    | |||||||||    
T  21973914 cagtgtaacat 21973924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 170424 - 170500
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataa-tttgtcaataatgtgctaaataaaattatgaggtaaat 123  Q
    ||||||||||||||||||||||| ||||||||||||||  ||| ||||||||||||||||||||||| |||||||||    
T  170424 acaaaagtacagtttgaaataagtgagatgaaatataaccttgccaataatgtgctaaataaaattaggaggtaaat 170500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 11843869 - 11843957
Alignment:
Q  43 tttttacaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttc 131  Q
    |||| ||||||||||| |||||||||||| |||||||||||||  |  ||||| ||||||||||||||||| |||||||||||||||||    
T  11843869 ttttaacaaaagtacaatttgaaataagatagatgaaatataacctaccaatagtgtgctaaataaaattaggaggtaaatgtcctttc 11843957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 17127549 - 17127478
Alignment:
Q  138 ctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||  ||||||||| |||||||||||||||||||||| ||| ||||||||| ||||||||||||||||    
T  17127549 ctctttcgagtgaatgttcgaataatatcaacatcatcaagcgacttgaatatctcccgctcggtgtaacat 17127478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 26 - 124
Target Start/End: Complemental strand, 41753177 - 41753076
Alignment:
Q  26 ataaaagaggatcttcatttttacaa---aagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaa 122  Q
    |||||||||| || ||||||||||||   || |||| ||||||||||||||||| ||||||||  |  |||||| ||||||||||||||||| || ||||    
T  41753177 ataaaagaggttcatcatttttacaacaaaaatacaatttgaaataagagagataaaatataacctaccaataacgtgctaaataaaattataagataaa 41753078  T
Q  123 tg 124  Q
    ||    
T  41753077 tg 41753076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Complemental strand, 33489862 - 33489817
Alignment:
Q  89 gtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaa 134  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||    
T  33489862 gtcaatagtgtgctaaataaaattaggaggtaaatgtcttttccaa 33489817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 41972267 - 41972312
Alignment:
Q  89 gtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaa 134  Q
    ||||||| ||||||||||||||||| |||||||||||| |||||||    
T  41972267 gtcaatagtgtgctaaataaaattaggaggtaaatgtcttttccaa 41972312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 48 - 113
Target Start/End: Complemental strand, 51053169 - 51053104
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaatta 113  Q
    |||||| |||| ||| |||||| |||||| ||||||||| | |||||| |||||||||||||||||    
T  51053169 acaaaaatacaatttaaaataaaagagataaaatataatctctcaatagtgtgctaaataaaatta 51053104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Complemental strand, 28463252 - 28463200
Alignment:
Q  91 caataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctcttt 143  Q
    ||||| ||||||||||||||||| ||||| |||| ||||||||| | ||||||    
T  28463252 caatagtgtgctaaataaaattaggaggtgaatgccctttccaagacctcttt 28463200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 96; Significance: 3e-47; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 31944814 - 31944655
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||| |||| ||||||||| ||| ||||||||||||| |||||||||| ||||||| | | |||||| |||||    
T  31944814 aaaagtacaatttgaaataagagagatgaaacataacttgtcaatagtgtactaaataaaattaggaggtaaatgccctttccgagacctctttgcggtg 31944715  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| |||||||||||||||||||||||||| |||||||||  | |||||||||||||    
T  31944714 aatgttcgaataatatcaacatcatcaagtgacttgaatatctcacactcggtgtaacat 31944655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 209
Target Start/End: Original strand, 53693011 - 53693170
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||| |||| ||| ||||| |||||||||| |||||| ||||| |||| ||||||| | | |||||| || ||    
T  53693011 aaaagtacaatttgaaataagagagatgaaacataacttgccaatagtgtgctaaatgaaattaagaggtgaatgccctttccgagacctctttgcgatg 53693110  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| |||||||||||||||||||||||| | ||| ||||| ||||||| ||||||||    
T  53693111 aatgttcgaataatatcaacatcatcaagtgccttgattatctcccgctcgatgtaacat 53693170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 55464610 - 55464796
Alignment:
Q  26 ataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaa 122  Q
    |||||||||| || ||||||||   ||||||||| | |||||||||||| |||||||||||||  || |||| | |||||||||||||||| |||||| |    
T  55464610 ataaaagaggttcgtcattttttcaacaaaagtataatttgaaataagaaagatgaaatataacctgccaattacgtgctaaataaaattaggaggtaga 55464709  T
Q  123 tgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    || | ||| |  |  |||||||  ||||||||| |||||||||||||||||||||||||| ||| | ||| ||||||||||||||||    
T  55464710 tgcctttttcgtagcctctttcgagtgaatgttcgaataatatcaacatcatcaagtgacttgattttctcccgctcggtgtaacat 55464796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 50 - 200
Target Start/End: Complemental strand, 3074567 - 3074417
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| |||||||||| |||||||||| |||| ||| ||||| ||||||||||||||||| ||| |||||| |||| |  | | |||||| || ||    
T  3074567 aaaagtacaatttgaaataaaagagatgaaacataacttgccaatagtgtgctaaataaaattaggagataaatgcccttcctgagacctctttgcgatg 3074468  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcg 200  Q
    ||||||  ||||||||||||||||||||||||| ||| ||||| |||||||    
T  3074467 aatgttcaaataatatcaacatcatcaagtgacttgattatctcccgctcg 3074417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 12211201 - 12211362
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| ||||| ||||||||||||||||||||  |  ||||| ||||||||||||||||| |||||||||||| ||| | | | ||| ||        
T  12211201 acaaaagtacaatttgagataagagagatgaaatataacctaccaatagtgtgctaaataaaattaggaggtaaatgtcattttcgagacctcattgaaa 12211300  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||| ||||||||||||||||||||| |||| ||||||||| | | ||||||||||||    
T  12211301 tgaatgttcgaataatatcaacatcatcaaatgacttgaatatctcctgttcggtgtaacat 12211362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 20 - 182
Target Start/End: Original strand, 8897870 - 8898035
Alignment:
Q  20 atcaagataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatga 116  Q
    ||||| |||||||||| || |||||||    ||||||||||| ||||||||||||||||||||||||||  |  ||||| | ||||||||||||||| ||    
T  8897870 atcaaaataaaagaggttcgtcattttgtcaacaaaagtacaatttgaaataagagagatgaaatataaactaccaatagtttgctaaataaaattagga 8897969  T
Q  117 ggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgac 182  Q
    |||||||   |||||  | | |||||| ||||||||| | ||||||||||||||||||| ||||||    
T  8897970 ggtaaatagtctttctgagacctctttgcggtgaatgctcgaataatatcaacatcatccagtgac 8898035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 138 - 209
Target Start/End: Complemental strand, 27364993 - 27364922
Alignment:
Q  138 ctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| ||||||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  27364993 ctcttttcggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacat 27364922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 4325609 - 4325451
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| |||||||||||||||||| || ||||  |||||||| ||||||||||||||||| ||||||| || ||||||  | | |  | | | |||    
T  4325609 aaaagtacaatttgaaataagagagatgcaacataacctgtcaatagtgtgctaaataaaattaggaggtaattgccctttctgaga-cattctgctgtg 4325511  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||||  |||||||||||||||||||||||   ||| ||||| || |||||||||||||    
T  4325510 aatgttcaaataatatcaacatcatcaagtgggttgattatctcccactcggtgtaacat 4325451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 26 - 192
Target Start/End: Complemental strand, 42843935 - 42843763
Alignment:
Q  26 ataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaa 122  Q
    |||||||||| || ||||||||   ||||||||||| ||| ||| ||| |||||||||||||| |   |||||| |||||||||||||||| || || ||    
T  42843935 ataaaagaggttcgtcattttttcaacaaaagtacaatttaaaacaagtgagatgaaatataactcaccaataacgtgctaaataaaattaggatgtcaa 42843836  T
Q  123 tgtcctttccaaaatctc---tttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatct 192  Q
    || |||  || | | |||   |||  |||||||||| || ||||||||||||||||||||||| |||||||||    
T  42843835 tgccctccccgagacctcctctttgtggtgaatgttcgattaatatcaacatcatcaagtgacttgaatatct 42843763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 182
Target Start/End: Original strand, 10632626 - 10632755
Alignment:
Q  55 tacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg--aat 152  Q
    |||| ||||||||||||||||||||||||||  |  ||||| ||||| ||||||||||| ||||||||||   ||||| | |  ||||| |||||  |||    
T  10632626 tacaatttgaaataagagagatgaaatataagctaccaatagtgtgcaaaataaaattaggaggtaaatgatatttccgagacttctttgcggtgaaaat 10632725  T
Q  153 gtttgaataatatcaacatcatcaagtgac 182  Q
    ||| |||||| || ||||||||||||||||    
T  10632726 gttcgaataacattaacatcatcaagtgac 10632755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 123
Target Start/End: Original strand, 25182854 - 25182929
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaat 123  Q
    ||||||| ||| ||| ||||||||||||||||||||||  | |||||| |||||||||||||||||  ||||||||    
T  25182854 acaaaagcacaatttaaaataagagagatgaaatataacctatcaatagtgtgctaaataaaattagaaggtaaat 25182929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 1147697 - 1147624
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaat 123  Q
    |||| |||| ||||||||||||||||||||| |||| ||||||||| |||  |||| ||||||| |||||||||    
T  1147697 aaaaatacaatttgaaataagagagatgaaacataacttgtcaatagtgttttaaagaaaattaggaggtaaat 1147624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 179
Target Start/End: Original strand, 3240266 - 3240380
Alignment:
Q  63 gaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataa 162  Q
    ||||||| |||||||||||||||| |  |||   ||| ||||||||||||| |||| ||||  | ||| | | |||||||| |||||||| || |||||     
T  3240266 gaaataaaagagatgaaatataatctaccaag--tgtactaaataaaattaggaggcaaataacattttcgagatctctttgcggtgaatattcgaatat 3240363  T
Q  163 tatcaacatcatcaagt 179  Q
    |||||||||||||||||    
T  3240364 tatcaacatcatcaagt 3240380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 50 - 86
Target Start/End: Complemental strand, 20114563 - 20114527
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataat 86  Q
    ||||||||| |||||||||||||||||||||||||||    
T  20114563 aaaagtacaatttgaaataagagagatgaaatataat 20114527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 20 - 68
Target Start/End: Complemental strand, 6255397 - 6255346
Alignment:
Q  20 atcaagataaaagaggatcttcattttt---acaaaagtacagtttgaaata 68  Q
    ||||||||||||||| ||| ||||||||   |||||||||||||||||||||    
T  6255397 atcaagataaaagagaatcatcattttttctacaaaagtacagtttgaaata 6255346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 125
Target Start/End: Complemental strand, 48130134 - 48130098
Alignment:
Q  89 gtcaataatgtgctaaataaaattatgaggtaaatgt 125  Q
    ||||||| ||||||||||||||||| |||||||||||    
T  48130134 gtcaatagtgtgctaaataaaattaggaggtaaatgt 48130098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 2e-45; HSPs: 16)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 50 - 202
Target Start/End: Complemental strand, 12539771 - 12539619
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    |||||||||  |||||||||||||||||||| ||||  |||||||| ||||||||||||||||| ||||||||||| |||||||| | |||||| |||||    
T  12539771 aaaagtacaaattgaaataagagagatgaaacataacgtgtcaatagtgtgctaaataaaattaggaggtaaatgttctttccaagacctctttgcggtg 12539672  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggt 202  Q
    |||||| |||||||||||||||||||||||||| ||||||||||  |||||||    
T  12539671 aatgttcgaataatatcaacatcatcaagtgacttgaatatcttatgctcggt 12539619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 48 - 206
Target Start/End: Original strand, 33453163 - 33453321
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| |||||||||||||| ||||||||||| ||| ||||| | ||||||||||||||| ||||||||||  |||||  | | |||||| |||    
T  33453163 acaaaagtacaatttgaaataagagatatgaaatataacttgccaatagtctgctaaataaaattaggaggtaaatgctctttctgatacctctttgcgg 33453262  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaa 206  Q
    |||||||| |||||||||||||||||||||||||| | ||||||| |||||||||||||    
T  33453263 tgaatgttcgaataatatcaacatcatcaagtgacttaaatatctcccgctcggtgtaa 33453321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 43 - 209
Target Start/End: Original strand, 35649632 - 35649796
Alignment:
Q  43 tttttacaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctt 142  Q
    |||| ||||||||||| |||||||||||||  |||||||||||  | |||| ||||| ||||||||||||| || ||||||||||||| | | |||||||    
T  35649632 ttttaacaaaagtacaatttgaaataagag--atgaaatataacctatcaaaaatgtactaaataaaattaggaagtaaatgtccttttcgagatctctt 35649729  T
Q  143 tccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    | | |||||||||| |||||||||||||||||||| |||| ||||||||| ||||||||||||||||    
T  35649730 tgcagtgaatgtttcaataatatcaacatcatcaaatgacttgaatatctcccgctcggtgtaacat 35649796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 20 - 220
Target Start/End: Complemental strand, 34907813 - 34907613
Alignment:
Q  20 atcaagataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatga 116  Q
    ||||| ||||||||||||| | ||||||   ||||||||||| ||||||||||||||||||||||||||   ||||||| |||  ||||||   ||| ||    
T  34907813 atcaaaataaaagaggatcgttattttttctacaaaagtacattttgaaataagagagatgaaatataacccgtcaatagtgtcttaaata---ttagga 34907717  T
Q  117 ggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacatcatcaag 216  Q
    |||||||| ||||| | |||  ||| |||| ||||||||||||| ||||||||| ||||||||||| ||| |||||  || |||||||||||||||||||    
T  34907716 ggtaaatgcccttttcgaaacttctctccgatgaatgtttgaattatatcaacaccatcaagtgacctgagtatctctcgttcggtgtaacatcatcaag 34907617  T
Q  217 tgac 220  Q
    ||||    
T  34907616 tgac 34907613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 48 - 209
Target Start/End: Original strand, 19951807 - 19951967
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||| | ||||||||| |||| |||||||||||  |||||||| |||||||||| ||||||  ||||||||| ||||| | | | |||||| |||    
T  19951807 acaaaagtataatttgaaata-gagatatgaaatataacctgtcaatagtgtgctaaattaaattagaaggtaaatgcccttttcgagacctctttgcgg 19951905  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||| |||||||||||||||||||||||||| |||||||||  ||||| |||| ||||    
T  19951906 tgaatgttcgaataatatcaacatcatcaagtgacttgaatatctctcgctcagtgtgacat 19951967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 131
Target Start/End: Complemental strand, 13309790 - 13309706
Alignment:
Q  47 tacaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttc 131  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||||||| ||||||    
T  13309790 tacaaaagtacagtttgaaataagagagatgaaatataatctgtcaatagtgtgctaaataatattatgaggtaaatgccctttc 13309706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 20 - 113
Target Start/End: Complemental strand, 1955060 - 1954964
Alignment:
Q  20 atcaagataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaatta 113  Q
    |||||||||||||||| || ||||||||   ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  1955060 atcaagataaaagaggttcgtcattttttcaacaaaagtacagtttgaaataagagagatgaaatataatctgtcaataacgtgctaaataaaatta 1954964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 22483749 - 22483588
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    |||||| |||| |||||| ||||||||||| ||||| |  ||  ||||  |||||| ||||||||| |||||||||| ||||||| | || ||||| |||    
T  22483749 acaaaattacaatttgaattaagagagatggaatattacctgcaaatagcgtgctagataaaattaggaggtaaatgccctttccgagatttctttgcgg 22483650  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||| ||||||||||||  |||||||||||  ||||||||| ||||||||||||||||    
T  22483649 tgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacat 22483588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 22464871 - 22464709
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaa-taatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccg 146  Q
    |||||| |||| |||||| ||||||||||| ||||| |  || ||| ||  |||||| ||||||||| |||||||||| ||||| | | || ||||| ||    
T  22464871 acaaaattacaatttgaattaagagagatggaatattacctggcaaatagcgtgctagataaaattaggaggtaaatgcccttttcgagatttctttgcg 22464772  T
Q  147 gtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||||||||||    
T  22464771 gtgaatgtttgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacat 22464709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 34526553 - 34526391
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaa-taatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccg 146  Q
    |||||| |||| |||||| ||||||||||| ||||| |  || ||| ||  |||||| ||||||||| |||||||||| ||||||| | || ||||| ||    
T  34526553 acaaaattacaatttgaattaagagagatggaatattacctgccaaatagcgtgctagataaaattaggaggtaaatgccctttccgagatttctttgcg 34526454  T
Q  147 gtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||||||| ||||||||||||  |||||||||||  ||||||||| ||||||||||||||||    
T  34526453 gtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacat 34526391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 175
Target Start/End: Original strand, 7886633 - 7886758
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| ||||||||||||||| ||||||||||  | |||||| ||||||||||||||||| ||||||| || ||||||  |||  ||||| |||    
T  7886633 acaaaagtacaatttgaaataagagaggtgaaatataacatatcaatagtgtgctaaataaaattaggaggtaagtgacctttctgaaacttctttgcgg 7886732  T
Q  148 tgaatgtttgaataatatcaacatcatc 175  Q
    ||||||||||||||  ||||||||||||    
T  7886733 tgaatgtttgaata--atcaacatcatc 7886758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 26656316 - 26656450
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| ||| ||||||||||||||||||||||  |   |||| ||||| ||||||||||| |||||||||| || ||| || |||||||| |||    
T  26656316 acaaaagtacaatttaaaataagagagatgaaatataacctactaatagtgtgcgaaataaaattaggaggtaaatgacc-ttctaagatctctttgcgg 26656414  T
Q  148 tgaatgtttgaataatatcaac-atcatcaagtgac 182  Q
    |||||||| ||||||||||||| ||| |||||||||    
T  26656415 tgaatgttcgaataatatcaacaatcgtcaagtgac 26656450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 146 - 209
Target Start/End: Complemental strand, 13308818 - 13308755
Alignment:
Q  146 ggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||  |||||||||||||||    
T  13308818 ggtgaatgttcgaataatatcaacatcatcaagtgacttgaatatctctcgctcggtgtaacat 13308755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 182
Target Start/End: Original strand, 18425947 - 18426070
Alignment:
Q  63 gaaataagagagatgaaatataatttgtcaataatgtgctaaat----aaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttga 158  Q
    ||||||||||||||||||||||| ||||||||| |||| |||||    ||||||| |||||||||  | |||   | | |||||| ||||||||||| ||    
T  18425947 gaaataagagagatgaaatataacttgtcaatagtgtgataaattaataaaattaggaggtaaataacatttttgagacctctttacggtgaatgttcga 18426046  T
Q  159 ataatatcaacatcatcaagtgac 182  Q
    ||||||||||||| ||||||||||    
T  18426047 ataatatcaacattatcaagtgac 18426070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 31392994 - 31392931
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaatta 113  Q
    ||||||||| ||| |||||||||||||| || ||||  |||||||| |||||||||||||||||    
T  31392994 aaaagtacaatttaaaataagagagatgtaacataacctgtcaatagtgtgctaaataaaatta 31392931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 42477530 - 42477459
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaa 121  Q
    ||||||| | ||| |||||||||||||||||| |||  |||| ||||  ||||||||||||||| |||||||    
T  42477530 aaaagtaaaatttaaaataagagagatgaaatgtaacctgtcgataacatgctaaataaaattaagaggtaa 42477459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 3e-38; HSPs: 15)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 48 - 208
Target Start/End: Complemental strand, 53710598 - 53710438
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    |||||||||||  || |||||||| |||| ||||||||  ||||||||  |||||||||||||||| |||||||||| |||||||   | |||||||  |    
T  53710598 acaaaagtacaacttaaaataagaaagataaaatataacctgtcaatagcgtgctaaataaaattaggaggtaaatgccctttccgtgacctctttcgag 53710499  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaaca 208  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  53710498 tgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaaca 53710438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 51262177 - 51262018
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||| ||||||||||  | ||| ||||  |||||||| ||||||||||||||||| ||||||||||| |||| ||| | |||||| || ||    
T  51262177 aaaagtacaatttaaaataagagacttaaaacataacctgtcaatagtgtgctaaataaaattaggaggtaaatgttcttttcaagacctctttacgatg 51262078  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| |||||||||||||||||||||||||| |||||||||||||||  |||||||||    
T  51262077 aatgttcgaataatatcaacatcatcaagtgacttgaatatcttccgcttagtgtaacat 51262018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 31989229 - 31989068
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    |||||||||||  || |||||||| |||||||||||||  ||| |||   |||||||||||||||| |||||||||| |||||||   | |||||||  |    
T  31989229 acaaaagtacaacttaaaataagaaagatgaaatataacctgttaatggcgtgctaaataaaattaggaggtaaatgccctttccgcgacctctttcgag 31989130  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  31989129 tgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacat 31989068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 43137326 - 43137166
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    |||||| |||| ||| |||||||||| |||||||||||| || ||||| ||||||||||||||||| |||||||||  | ||||  | | ||||| | ||    
T  43137326 acaaaaatacaatttaaaataagagatatgaaatataatctgccaatagtgtgctaaataaaattaggaggtaaataccttttctgagacctcttgc-gg 43137228  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
     ||||||| |||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  43137227 cgaatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtgtaacat 43137166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 177
Target Start/End: Original strand, 24988790 - 24988917
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||| ||||| || ||||| ||||||||||||||||| ||| || ||| ||||||| | | |||||| |||||    
T  24988790 aaaagtacaatttgaaataagagagatgaaacataatctggcaatagtgtgctaaataaaattaggagatacatgccctttccgagacctctttgcggtg 24988889  T
Q  150 aatgtttgaataatatcaacatcatcaa 177  Q
    |||||| |||||||||||||||||||||    
T  24988890 aatgttcgaataatatcaacatcatcaa 24988917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 48 - 182
Target Start/End: Original strand, 22934774 - 22934908
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||| |||||||||| |||||||||||||||| | |||||| |||  |||| ||||||| |||||||||| ||||||| | | |||||| |||    
T  22934774 acaaaagtacaatttgaaataacagagatgaaatataatatatcaatagtgtcttaaacaaaattaagaggtaaatgacctttccgagacctctttgcgg 22934873  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgac 182  Q
    ||||||||  |||||||||||||||||||||||||    
T  22934874 tgaatgttctaataatatcaacatcatcaagtgac 22934908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 91 - 209
Target Start/End: Original strand, 3856894 - 3857012
Alignment:
Q  91 caataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatat 190  Q
    ||||||||||||||||||||||| ||||||||| | |||||  | | |||||| ||||||||||||||||||||||||||||||||| |||| |||||||    
T  3856894 caataatgtgctaaataaaattaggaggtaaattttctttctgagacctctttgcggtgaatgtttgaataatatcaacatcatcaaatgacttgaatat 3856993  T
Q  191 cttccgctcggtgtaacat 209  Q
    || || ||| | |||||||    
T  3856994 ctcccactctgagtaacat 3857012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 48 - 192
Target Start/End: Original strand, 37381844 - 37381988
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    ||||||||||  ||| |||||||||| |||||||||||  ||||||||  ||||| |||||||||| |||| ||||||| ||||| | | |||||| | |    
T  37381844 acaaaagtacgatttaaaataagagatatgaaatataacctgtcaatagcgtgctgaataaaattaggaggcaaatgtcatttccgagacctctttgcag 37381943  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatct 192  Q
    |||||||| ||||||||| ||||||||||| |||| |||||||||    
T  37381944 tgaatgttcgaataatataaacatcatcaaatgacttgaatatct 37381988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 73 - 209
Target Start/End: Original strand, 24908393 - 24908529
Alignment:
Q  73 agatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatc 172  Q
    |||||||||||||  ||| ||||  |||||||||||||||| |||||||||  |||||||   | |||||||  ||||||||| ||||||||||||||||    
T  24908393 agatgaaatataacctgtgaatagcgtgctaaataaaattaggaggtaaataccctttccgcgacctctttcgagtgaatgttcgaataatatcaacatc 24908492  T
Q  173 atcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
     ||||| ||| ||||||||| | ||| ||||||||||    
T  24908493 ttcaagcgacttgaatatctcctgcttggtgtaacat 24908529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 131
Target Start/End: Original strand, 51408584 - 51408667
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttc 131  Q
    ||||||||||| |||||||||||| |||||||||||||  ||||||||  |||||||||||||||| |||||||||| ||||||    
T  51408584 acaaaagtacaatttgaaataagaaagatgaaatataacatgtcaatagcgtgctaaataaaattaggaggtaaatgccctttc 51408667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 43 - 209
Target Start/End: Complemental strand, 43586014 - 43585856
Alignment:
Q  43 tttttacaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctt 142  Q
    |||| ||||||||||| ||||||||||||||||  ||||||||  ||  ||||  |||||||||||||||| |||||||||||| |||| |  |||||||    
T  43586014 ttttaacaaaagtacaatttgaaataagagagaataaatataacctgataatagcgtgctaaataaaattaggaggtaaatgtcttttctacgatctctt 43585915  T
Q  143 tccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||        |  |||||||||| |||||| |||||| || || |||||| ||||||||||||||||    
T  43585914 tc--------gagtgaataatattaacatcgtcaagtaacttggatatctcccgctcggtgtaacat 43585856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 15668111 - 15668012
Alignment:
Q  110 attatgaggtaaatgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||| |||||||||| | ||||| | | ||||||   ||| ||||| |||||||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  15668111 attaggaggtaaatgccttttccgatacctctttgttgtgcatgttcgaataatatcaacatcatcaagtgacttgaatatctcccgctcggtataacat 15668012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 123
Target Start/End: Complemental strand, 9743466 - 9743393
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaat 123  Q
    |||||||||  |||||||||||||||||||| ||||  |  ||||| ||||||||||||||||| |||||||||    
T  9743466 aaaagtacaaattgaaataagagagatgaaacataacctaccaatagtgtgctaaataaaattacgaggtaaat 9743393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 123
Target Start/End: Complemental strand, 5135444 - 5135410
Alignment:
Q  89 gtcaataatgtgctaaataaaattatgaggtaaat 123  Q
    ||||||| |||||||||||||||||||||||||||    
T  5135444 gtcaatagtgtgctaaataaaattatgaggtaaat 5135410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 124
Target Start/End: Complemental strand, 38282563 - 38282531
Alignment:
Q  92 aataatgtgctaaataaaattatgaggtaaatg 124  Q
    |||| ||||||||||||||||||||||||||||    
T  38282563 aatagtgtgctaaataaaattatgaggtaaatg 38282531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 260118 - 259957
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccgg 147  Q
    |||||| |||| |||||| |||||||||||||||||||| ||||||||  |||||||||||||||| | |||||||| | ||||| | | |||||| |||    
T  260118 acaaaattacaatttgaattaagagagatgaaatataatctgtcaatagcgtgctaaataaaattaggtggtaaatgccatttccgagacctctttgcgg 260019  T
Q  148 tgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||||| ||||||||||||  |||||||||||| ||||||| | ||||||| ||||||||    
T  260018 tgaatgttcgaataatatcaatgtcatcaagtgacttgaatatatcccgctcgatgtaacat 259957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 51 - 209
Target Start/End: Original strand, 435326 - 435486
Alignment:
Q  51 aaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtga 150  Q
    |||||| | |||||||||||||| |||||||||||| || ||||| ||||||||||||||||| |||||||||||||||| | | | |||||  |||| |    
T  435326 aaagtataatttgaaataagagatatgaaatataatctgacaatagtgtgctaaataaaattaggaggtaaatgtccttttcgagacctcttcgcggtta 435425  T
Q  151 --atgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
      |||||  |||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  435426 atatgttctaataatatcaacataatcaagtgacttgaatatcttccgctcggtgtaacat 435486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 26 - 209
Target Start/End: Original strand, 214111 - 214297
Alignment:
Q  26 ataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaa 122  Q
    |||||||||| |||||||||||   ||||||||||| ||| |||||||| |||||||||||||  || |||||  |||||||||||||||| ||||||||    
T  214111 ataaaagaggttcttcattttttcaacaaaagtacaattttaaataagaaagatgaaatataacctgccaatagcgtgctaaataaaattaggaggtaaa 214210  T
Q  123 tgtcctttccaaaatctctttccggtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |  |||||||   | ||||||   || |||||| ||||||||||||||||||||||||||  |||||||| | ||||||||||||||    
T  214211 ttccctttccgcgacctcttttgagttaatgttcgaataatatcaacatcatcaagtgactcgaatatctcctgctcggtgtaacat 214297  T

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Target: scaffold0726 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0726
Description:

Target: scaffold0726; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 1081 - 954
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||||||||||||||||| ||||| || ||||| ||||||||||||||||| ||| |||||| ||||||  | | |||||| |||||    
T  1081 aaaagtacaatttgaaataagagagatgaaacataatctggcaatagtgtgctaaataaaattaggagataaatgccctttcggagacctctttgcggtg 982  T
Q  150 aatgtttgaataatatcaacatcatcaa 177  Q
    |||||| |||||||||||||||||||||    
T  981 aatgttcgaataatatcaacatcatcaa 954  T

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Target: scaffold0178 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0178
Description:

Target: scaffold0178; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 50 - 217
Target Start/End: Complemental strand, 17936 - 17769
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| ||||||| ||||||  |||||  |||| |||||||| ||||||||||||||||| ||| |||||||||||||  | | |||||| |||||    
T  17936 aaaagtacaatttgaaacaagaga--tgaaacgtaatctgtcaatagtgtgctaaataaaattaggagttaaatgtcctttcggagacctctttgcggtg 17839  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaac--atcatcaagt 217  Q
    |||||| ||||||||||||||||| |||||||| | ||||||| ||||||| ||||||  ||||||||||    
T  17838 aatgttcgaataatatcaacatcagcaagtgacttaaatatctcccgctcgatgtaacgtatcatcaagt 17769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 16015 - 15853
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaa-taatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccg 146  Q
    |||||| |||| |||||| ||||||||||| ||||| |  || ||| ||  |||||| ||||||||| |||||||||| ||||||| | || ||||| ||    
T  16015 acaaaattacaatttgaattaagagagatggaatattacctggcaaatagcgtgctagataaaattaggaggtaaatgccctttccgagatttctttgcg 15916  T
Q  147 gtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||||||| ||||||||||||  |||||||||||  ||||||||| ||||||||||||||||    
T  15915 gtgaatgttcgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacat 15853  T

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Target: scaffold0012 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 48 - 209
Target Start/End: Complemental strand, 197306 - 197144
Alignment:
Q  48 acaaaagtacagtttgaaataagagagatgaaatataatttgtcaa-taatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccg 146  Q
    |||||| |||| |||||| ||||||||||| ||||| |  || ||| ||  |||||| ||||||||| |||||||||| ||||| | | || ||||| ||    
T  197306 acaaaattacaatttgaattaagagagatggaatattacctggcaaatagcgtgctagataaaattaggaggtaaatgcccttttcgagatttctttgcg 197207  T
Q  147 gtgaatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||| ||||||||||||||||    
T  197206 gtgaatgtttgaataatatcaatgtcatcaagtgatttgaatatctcccgctcggtgtaacat 197144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 50 - 209
Target Start/End: Complemental strand, 1594 - 1435
Alignment:
Q  50 aaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaatgtcctttccaaaatctctttccggtg 149  Q
    ||||||||| | ||||| ||||||||||||| |||   || | ||| | ||||||||||||||| |||| ||||| | ||||| | | |||||| |  ||    
T  1594 aaaagtacaatctgaaacaagagagatgaaacatagcatgccgatagtatgctaaataaaattaggaggcaaatgccatttccgagacctctttgcaatg 1495  T
Q  150 aatgtttgaataatatcaacatcatcaagtgacatgaatatcttccgctcggtgtaacat 209  Q
    |||||| |||||||||||||||||||||||||  ||||||||| ||||||||||||||||    
T  1494 aatgttcgaataatatcaacatcatcaagtgatttgaatatctcccgctcggtgtaacat 1435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 163
Target Start/End: Complemental strand, 9301 - 9161
Alignment:
Q  26 ataaaagaggatcttcattttt---acaaaagtacagtttgaaataagagagatgaaatataatttgtcaataatgtgctaaataaaattatgaggtaaa 122  Q
    |||||||||| || ||||||||   ||||||||||| |||||||||||| |||||||||||||  |   || |   | ||||||||||||| ||||||||    
T  9301 ataaaagaggttcgtcattttttcaacaaaagtacaatttgaaataagaaagatgaaatataacctaaaaaaagcatcctaaataaaattaggaggtaaa 9202  T
Q  123 tgtcctttccaaaatctctttccggtgaatgtttgaataat 163  Q
    ||||||||| |  | |||||||  ||||||||| |||||||    
T  9201 tgtcctttctacgacctctttcgagtgaatgttcgaataat 9161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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