View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6700_low_18 (Length: 253)
Name: NF6700_low_18
Description: NF6700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6700_low_18 |
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Alignment Details
Target: chr2 (Bit Score: 171; Significance: 6e-92; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 171; E-Value: 6e-92
Query Start/End: Original strand, 60 - 234
Target Start/End: Complemental strand, 36946326 - 36946152
Alignment:
| Q |
60 |
gtgttaacaagtaaagagattactaacaaccttctctgatatttagtgctgctatcggtgaagtaaacgttcccttctgtatcaatgtctacatcattag |
159 |
Q |
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| T |
36946326 |
gtgttaacaagtaaagagattactaacaaccttctctgatatttagtgctgctatcggtgaagtaaacgttcccttctgtatcaatgtctacatcattag |
36946227 |
T |
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| Q |
160 |
taaatctaaatggtactccttctgcctcggttgcaagagatgttgcgaaaccaccttgaggccccaccttcataa |
234 |
Q |
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||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36946226 |
taaatctaaatggtactccttctgcttcggttgcaagagatgttgcgaaaccaccttgaggccccaccttcataa |
36946152 |
T |
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