View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6700_low_30 (Length: 230)

Name: NF6700_low_30
Description: NF6700
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6700_low_30
NF6700_low_30
[»] chr6 (27 HSPs)
chr6 (46-221)||(34644859-34645034)
chr6 (46-215)||(19880131-19880300)
chr6 (46-215)||(18795523-18795692)
chr6 (46-215)||(25769024-25769193)
chr6 (69-215)||(21472457-21472603)
chr6 (46-165)||(19435835-19435954)
chr6 (46-213)||(19488553-19488720)
chr6 (47-215)||(15460170-15460338)
chr6 (53-165)||(5296535-5296647)
chr6 (46-162)||(19454253-19454369)
chr6 (46-215)||(21563411-21563580)
chr6 (46-215)||(21569270-21569439)
chr6 (53-165)||(8762262-8762374)
chr6 (46-165)||(14379246-14379365)
chr6 (46-165)||(14380796-14380915)
chr6 (53-165)||(10468178-10468290)
chr6 (46-165)||(28282142-28282261)
chr6 (46-162)||(18197057-18197173)
chr6 (53-168)||(24365252-24365367)
chr6 (46-211)||(23079302-23079467)
chr6 (46-162)||(18966624-18966740)
chr6 (46-190)||(19865520-19865664)
chr6 (46-215)||(25609140-25609309)
chr6 (46-215)||(22434702-22434871)
chr6 (46-215)||(22443100-22443269)
chr6 (46-147)||(27566327-27566428)
chr6 (47-162)||(15896928-15897043)
[»] scaffold0076 (2 HSPs)
scaffold0076 (46-215)||(32814-32983)
scaffold0076 (46-165)||(56087-56206)
[»] chr7 (33 HSPs)
chr7 (46-215)||(19613634-19613803)
chr7 (47-215)||(19148171-19148339)
chr7 (47-215)||(20747570-20747738)
chr7 (46-215)||(11387549-11387718)
chr7 (46-215)||(15101724-15101893)
chr7 (53-213)||(16949595-16949755)
chr7 (47-165)||(14285547-14285665)
chr7 (46-215)||(16071416-16071584)
chr7 (46-165)||(578-697)
chr7 (46-213)||(12205923-12206090)
chr7 (53-165)||(12456668-12456780)
chr7 (46-165)||(14434650-14434769)
chr7 (69-215)||(14263365-14263511)
chr7 (46-162)||(13666496-13666612)
chr7 (46-165)||(15341390-15341509)
chr7 (46-165)||(18053124-18053243)
chr7 (53-168)||(12457606-12457721)
chr7 (46-131)||(15625510-15625595)
chr7 (53-165)||(13022323-13022435)
chr7 (46-190)||(15153825-15153969)
chr7 (53-168)||(11305431-11305546)
chr7 (53-168)||(49153267-49153382)
chr7 (46-190)||(15204577-15204721)
chr7 (47-158)||(321237-321348)
chr7 (53-168)||(26117773-26117888)
chr7 (53-213)||(11771386-11771546)
chr7 (53-156)||(14955519-14955622)
chr7 (53-156)||(18178707-18178810)
chr7 (53-168)||(13967836-13967951)
chr7 (46-213)||(14040653-14040820)
chr7 (46-213)||(14350683-14350850)
chr7 (46-165)||(23505041-23505160)
chr7 (46-116)||(14130832-14130902)
[»] chr2 (20 HSPs)
chr2 (46-215)||(27364753-27364922)
chr2 (46-213)||(23277376-23277543)
chr2 (46-165)||(19651776-19651895)
chr2 (94-215)||(23099692-23099813)
chr2 (46-213)||(23294535-23294702)
chr2 (59-213)||(23111349-23111503)
chr2 (53-168)||(20828866-20828981)
chr2 (53-168)||(20833592-20833707)
chr2 (53-168)||(31831265-31831380)
chr2 (46-165)||(27788341-27788460)
chr2 (53-215)||(21324940-21325102)
chr2 (48-165)||(24949191-24949309)
chr2 (46-215)||(24676089-24676258)
chr2 (46-215)||(27209846-27210015)
chr2 (46-213)||(24819362-24819529)
chr2 (53-168)||(1064358-1064473)
chr2 (46-156)||(24876482-24876592)
chr2 (48-190)||(21890417-21890559)
chr2 (53-215)||(22756139-22756301)
chr2 (110-194)||(24707177-24707261)
[»] scaffold0029 (2 HSPs)
scaffold0029 (46-215)||(113559-113728)
scaffold0029 (46-219)||(95135-95308)
[»] chr5 (30 HSPs)
chr5 (46-215)||(21680094-21680263)
chr5 (46-213)||(24619613-24619780)
chr5 (46-213)||(24715844-24716011)
chr5 (46-213)||(24748872-24749039)
chr5 (46-215)||(21890075-21890244)
chr5 (47-190)||(21496957-21497100)
chr5 (46-190)||(21831102-21831246)
chr5 (46-213)||(22462835-22463001)
chr5 (53-213)||(20774649-20774809)
chr5 (46-190)||(20822336-20822480)
chr5 (47-213)||(21563291-21563457)
chr5 (46-165)||(17268700-17268819)
chr5 (53-168)||(24797760-24797875)
chr5 (53-168)||(37542744-37542859)
chr5 (48-213)||(22235238-22235403)
chr5 (53-168)||(20343172-20343287)
chr5 (53-168)||(28894305-28894420)
chr5 (53-168)||(28915776-28915891)
chr5 (53-168)||(28923131-28923246)
chr5 (48-213)||(26738045-26738210)
chr5 (53-165)||(23079455-23079567)
chr5 (53-168)||(14886354-14886469)
chr5 (53-168)||(22503569-22503684)
chr5 (53-168)||(25848965-25849080)
chr5 (1-35)||(23473054-23473088)
chr5 (53-215)||(23517434-23517596)
chr5 (46-215)||(18776671-18776840)
chr5 (46-215)||(23441111-23441280)
chr5 (110-215)||(23574694-23574799)
chr5 (95-215)||(20800398-20800518)
[»] chr3 (32 HSPs)
chr3 (46-215)||(14087271-14087440)
chr3 (46-212)||(13971485-13971651)
chr3 (46-215)||(14574521-14574690)
chr3 (47-215)||(10419407-10419575)
chr3 (47-213)||(18133710-18133876)
chr3 (53-210)||(13299889-13300046)
chr3 (53-210)||(13310547-13310704)
chr3 (46-165)||(16380340-16380459)
chr3 (46-165)||(31694598-31694717)
chr3 (53-210)||(13319869-13320026)
chr3 (46-213)||(15228247-15228414)
chr3 (46-165)||(31939501-31939620)
chr3 (48-162)||(11303188-11303302)
chr3 (53-215)||(17493235-17493397)
chr3 (48-215)||(16827565-16827732)
chr3 (53-168)||(47124549-47124664)
chr3 (59-213)||(15234128-15234282)
chr3 (53-168)||(16329069-16329184)
chr3 (46-165)||(4679036-4679155)
chr3 (46-165)||(8758494-8758613)
chr3 (53-168)||(10384573-10384688)
chr3 (110-213)||(12359891-12359994)
chr3 (53-168)||(28754923-28755038)
chr3 (46-165)||(41178120-41178239)
chr3 (46-131)||(15248735-15248820)
chr3 (53-162)||(11960584-11960693)
chr3 (53-162)||(16337927-16338036)
chr3 (47-165)||(16835922-16836040)
chr3 (46-90)||(12360029-12360073)
chr3 (46-150)||(16692752-16692856)
chr3 (46-165)||(44777845-44777964)
chr3 (46-131)||(15209479-15209564)
[»] scaffold0028 (3 HSPs)
scaffold0028 (46-215)||(49651-49820)
scaffold0028 (46-156)||(9474-9584)
scaffold0028 (46-156)||(15936-16046)
[»] scaffold0090 (2 HSPs)
scaffold0090 (53-215)||(19856-20018)
scaffold0090 (53-215)||(24018-24180)
[»] scaffold0117 (1 HSPs)
scaffold0117 (63-215)||(6822-6974)
[»] chr8 (32 HSPs)
chr8 (47-215)||(19852447-19852615)
chr8 (47-215)||(19858483-19858651)
chr8 (47-215)||(21841453-21841621)
chr8 (47-168)||(1267274-1267395)
chr8 (47-215)||(20009497-20009665)
chr8 (46-213)||(31416053-31416220)
chr8 (46-215)||(23655962-23656131)
chr8 (69-215)||(20985124-20985270)
chr8 (46-190)||(20389134-20389278)
chr8 (53-165)||(20975278-20975390)
chr8 (53-211)||(22371982-22372140)
chr8 (46-165)||(22051898-22052017)
chr8 (53-168)||(803297-803412)
chr8 (53-168)||(6604700-6604815)
chr8 (53-168)||(6680153-6680268)
chr8 (53-168)||(12305800-12305915)
chr8 (46-165)||(31570469-31570588)
chr8 (56-162)||(29303056-29303162)
chr8 (53-162)||(27355590-27355698)
chr8 (53-168)||(14566184-14566299)
chr8 (53-168)||(16270848-16270963)
chr8 (46-213)||(22247996-22248163)
chr8 (46-213)||(22988231-22988398)
chr8 (53-215)||(16407622-16407784)
chr8 (46-215)||(19979002-19979171)
chr8 (46-144)||(23949954-23950052)
chr8 (46-131)||(20395793-20395878)
chr8 (53-215)||(21166115-21166277)
chr8 (46-144)||(22377102-22377200)
chr8 (46-144)||(22383277-22383375)
chr8 (46-215)||(30312721-30312890)
chr8 (95-131)||(23886108-23886144)
[»] scaffold0108 (1 HSPs)
scaffold0108 (46-215)||(48104-48273)
[»] scaffold0192 (1 HSPs)
scaffold0192 (46-215)||(27524-27693)
[»] scaffold0053 (2 HSPs)
scaffold0053 (48-215)||(48171-48338)
scaffold0053 (46-165)||(57034-57153)
[»] scaffold2112 (1 HSPs)
scaffold2112 (69-215)||(1-147)
[»] scaffold0001 (2 HSPs)
scaffold0001 (46-215)||(89582-89751)
scaffold0001 (46-215)||(90260-90429)
[»] scaffold0244 (1 HSPs)
scaffold0244 (46-215)||(18349-18518)
[»] chr4 (21 HSPs)
chr4 (46-215)||(15002498-15002667)
chr4 (46-210)||(1648416-1648580)
chr4 (46-213)||(8706887-8707054)
chr4 (46-213)||(27901355-27901522)
chr4 (47-215)||(15078605-15078773)
chr4 (47-213)||(15414162-15414328)
chr4 (46-215)||(15246893-15247062)
chr4 (47-188)||(15320120-15320261)
chr4 (46-162)||(15358307-15358423)
chr4 (46-156)||(16148680-16148790)
chr4 (46-156)||(16152826-16152936)
chr4 (53-168)||(3263975-3264090)
chr4 (53-168)||(29452718-29452833)
chr4 (53-165)||(33223899-33224011)
chr4 (53-168)||(44661047-44661162)
chr4 (54-190)||(14695090-14695226)
chr4 (46-162)||(14850293-14850409)
chr4 (53-168)||(11206412-11206527)
chr4 (53-168)||(20891958-20892073)
chr4 (1-35)||(14696008-14696042)
chr4 (46-215)||(15146759-15146928)
[»] scaffold0751 (1 HSPs)
scaffold0751 (46-214)||(3176-3344)
[»] scaffold0523 (1 HSPs)
scaffold0523 (47-215)||(870-1038)
[»] scaffold0476 (1 HSPs)
scaffold0476 (46-165)||(2517-2636)
[»] scaffold0234 (1 HSPs)
scaffold0234 (46-213)||(24211-24378)
[»] scaffold0068 (1 HSPs)
scaffold0068 (46-136)||(34188-34278)
[»] scaffold2094 (1 HSPs)
scaffold2094 (46-211)||(203-368)
[»] scaffold0106 (1 HSPs)
scaffold0106 (46-215)||(32411-32580)
[»] scaffold0026 (1 HSPs)
scaffold0026 (47-215)||(29058-29226)
[»] scaffold0249 (1 HSPs)
scaffold0249 (48-215)||(1110-1276)
[»] scaffold0034 (3 HSPs)
scaffold0034 (46-165)||(13088-13207)
scaffold0034 (46-213)||(68370-68537)
scaffold0034 (53-162)||(4143-4252)
[»] scaffold0165 (1 HSPs)
scaffold0165 (47-215)||(5431-5599)
[»] scaffold0600 (1 HSPs)
scaffold0600 (46-215)||(4776-4945)
[»] scaffold0404 (1 HSPs)
scaffold0404 (46-215)||(5750-5919)
[»] scaffold0403 (2 HSPs)
scaffold0403 (46-215)||(3791-3960)
scaffold0403 (1-35)||(8298-8332)
[»] scaffold0304 (1 HSPs)
scaffold0304 (46-215)||(2622-2791)
[»] scaffold1288 (1 HSPs)
scaffold1288 (47-215)||(1991-2159)
[»] scaffold0067 (4 HSPs)
scaffold0067 (46-165)||(51367-51486)
scaffold0067 (46-165)||(60401-60520)
scaffold0067 (46-165)||(66789-66908)
scaffold0067 (46-140)||(26400-26494)
[»] scaffold0222 (2 HSPs)
scaffold0222 (47-213)||(2494-2660)
scaffold0222 (48-165)||(8062-8179)
[»] scaffold0139 (3 HSPs)
scaffold0139 (53-215)||(286-448)
scaffold0139 (48-147)||(28219-28318)
scaffold0139 (48-147)||(34472-34571)
[»] scaffold0682 (1 HSPs)
scaffold0682 (46-215)||(883-1052)
[»] scaffold1830 (1 HSPs)
scaffold1830 (46-162)||(1-117)
[»] chr1 (18 HSPs)
chr1 (53-165)||(24098859-24098971)
chr1 (46-165)||(20939319-20939438)
chr1 (46-168)||(20856013-20856135)
chr1 (59-213)||(23197454-23197608)
chr1 (53-162)||(19662396-19662505)
chr1 (53-168)||(20295403-20295518)
chr1 (48-162)||(19855291-19855405)
chr1 (47-162)||(19760132-19760247)
chr1 (113-213)||(20835108-20835208)
chr1 (53-168)||(31539250-31539365)
chr1 (53-168)||(37678071-37678186)
chr1 (46-156)||(50619509-50619619)
chr1 (53-190)||(22110013-22110150)
chr1 (53-190)||(22113862-22113999)
chr1 (46-213)||(16373513-16373680)
chr1 (46-156)||(19107352-19107462)
chr1 (110-215)||(21025221-21025326)
chr1 (46-78)||(20835231-20835263)
[»] scaffold0298 (3 HSPs)
scaffold0298 (46-213)||(11196-11363)
scaffold0298 (46-213)||(14966-15133)
scaffold0298 (46-215)||(20983-21152)
[»] scaffold0035 (1 HSPs)
scaffold0035 (47-162)||(3752-3867)
[»] scaffold0058 (1 HSPs)
scaffold0058 (47-165)||(20121-20239)
[»] scaffold0010 (3 HSPs)
scaffold0010 (47-213)||(46538-46704)
scaffold0010 (53-168)||(41517-41632)
scaffold0010 (53-190)||(2921-3058)
[»] scaffold0011 (4 HSPs)
scaffold0011 (46-215)||(149570-149739)
scaffold0011 (46-213)||(194843-195010)
scaffold0011 (53-213)||(25672-25832)
scaffold0011 (1-35)||(24879-24913)
[»] scaffold0156 (1 HSPs)
scaffold0156 (46-162)||(28225-28341)
[»] scaffold0009 (1 HSPs)
scaffold0009 (53-165)||(249620-249732)
[»] scaffold0309 (1 HSPs)
scaffold0309 (46-213)||(10793-10960)
[»] scaffold0261 (2 HSPs)
scaffold0261 (46-209)||(14340-14503)
scaffold0261 (46-209)||(22519-22682)
[»] scaffold0004 (2 HSPs)
scaffold0004 (46-165)||(323704-323823)
scaffold0004 (48-186)||(202634-202772)
[»] scaffold0232 (1 HSPs)
scaffold0232 (53-215)||(823-985)
[»] scaffold1061 (1 HSPs)
scaffold1061 (46-162)||(2588-2704)
[»] scaffold0465 (1 HSPs)
scaffold0465 (46-213)||(372-540)
[»] scaffold0077 (1 HSPs)
scaffold0077 (46-162)||(20631-20747)
[»] scaffold1646 (1 HSPs)
scaffold1646 (46-165)||(324-443)
[»] scaffold0367 (1 HSPs)
scaffold0367 (46-165)||(6425-6544)
[»] scaffold0126 (1 HSPs)
scaffold0126 (46-165)||(41917-42036)
[»] scaffold0114 (2 HSPs)
scaffold0114 (46-165)||(20900-21019)
scaffold0114 (46-165)||(45517-45636)
[»] scaffold0101 (1 HSPs)
scaffold0101 (46-165)||(4639-4758)
[»] scaffold0049 (1 HSPs)
scaffold0049 (48-190)||(51025-51167)
[»] scaffold0020 (2 HSPs)
scaffold0020 (53-147)||(100754-100848)
scaffold0020 (46-187)||(181199-181340)
[»] scaffold0130 (1 HSPs)
scaffold0130 (48-213)||(9947-10112)
[»] scaffold0865 (1 HSPs)
scaffold0865 (119-215)||(3409-3505)
[»] scaffold0133 (1 HSPs)
scaffold0133 (119-215)||(30422-30518)
[»] scaffold0124 (1 HSPs)
scaffold0124 (46-162)||(13200-13316)
[»] scaffold0071 (1 HSPs)
scaffold0071 (46-162)||(48396-48512)
[»] scaffold0060 (1 HSPs)
scaffold0060 (53-165)||(43790-43902)
[»] scaffold0239 (1 HSPs)
scaffold0239 (46-165)||(11973-12092)
[»] scaffold0213 (1 HSPs)
scaffold0213 (46-141)||(5547-5642)
[»] scaffold0518 (1 HSPs)
scaffold0518 (47-213)||(11734-11900)
[»] scaffold0203 (1 HSPs)
scaffold0203 (48-213)||(13438-13603)
[»] scaffold0120 (2 HSPs)
scaffold0120 (46-162)||(742-857)
scaffold0120 (53-213)||(13065-13225)
[»] scaffold0742 (1 HSPs)
scaffold0742 (46-165)||(6213-6332)
[»] scaffold0585 (1 HSPs)
scaffold0585 (128-214)||(6229-6315)
[»] scaffold0235 (2 HSPs)
scaffold0235 (46-162)||(10647-10763)
scaffold0235 (46-162)||(20861-20977)
[»] scaffold0190 (1 HSPs)
scaffold0190 (53-165)||(32506-32618)
[»] scaffold0046 (1 HSPs)
scaffold0046 (53-165)||(81019-81131)
[»] scaffold0005 (2 HSPs)
scaffold0005 (46-165)||(261308-261427)
scaffold0005 (53-190)||(277992-278129)
[»] scaffold1602 (1 HSPs)
scaffold1602 (46-156)||(1263-1373)
[»] scaffold0056 (1 HSPs)
scaffold0056 (53-190)||(4515-4652)
[»] scaffold0012 (2 HSPs)
scaffold0012 (46-190)||(230043-230187)
scaffold0012 (46-143)||(218626-218723)
[»] scaffold0708 (1 HSPs)
scaffold0708 (53-165)||(7332-7444)
[»] scaffold0113 (1 HSPs)
scaffold0113 (46-138)||(25079-25171)
[»] scaffold0104 (2 HSPs)
scaffold0104 (53-165)||(20401-20513)
scaffold0104 (53-165)||(23221-23333)
[»] scaffold0089 (2 HSPs)
scaffold0089 (110-213)||(10501-10604)
scaffold0089 (53-168)||(15897-16012)
[»] scaffold0037 (1 HSPs)
scaffold0037 (46-131)||(116126-116211)
[»] scaffold0006 (1 HSPs)
scaffold0006 (46-156)||(102233-102343)
[»] scaffold0180 (1 HSPs)
scaffold0180 (46-190)||(31915-32059)
[»] scaffold0331 (1 HSPs)
scaffold0331 (46-213)||(17116-17283)
[»] scaffold0064 (1 HSPs)
scaffold0064 (46-190)||(39921-40065)
[»] scaffold0018 (2 HSPs)
scaffold0018 (46-213)||(11336-11503)
scaffold0018 (46-213)||(17528-17695)
[»] scaffold0431 (1 HSPs)
scaffold0431 (46-156)||(8366-8476)
[»] scaffold0411 (1 HSPs)
scaffold0411 (48-162)||(14269-14383)
[»] scaffold0359 (1 HSPs)
scaffold0359 (46-213)||(17681-17848)
[»] scaffold0088 (1 HSPs)
scaffold0088 (53-168)||(27940-28055)
[»] scaffold0084 (1 HSPs)
scaffold0084 (48-147)||(6223-6322)
[»] scaffold0042 (2 HSPs)
scaffold0042 (48-159)||(66407-66518)
scaffold0042 (53-190)||(38982-39119)
[»] scaffold0040 (2 HSPs)
scaffold0040 (46-165)||(15877-15996)
scaffold0040 (46-190)||(112650-112794)
[»] scaffold0270 (2 HSPs)
scaffold0270 (1-35)||(5797-5831)
scaffold0270 (1-35)||(12927-12961)
[»] scaffold0083 (1 HSPs)
scaffold0083 (46-128)||(10240-10322)
[»] scaffold0676 (1 HSPs)
scaffold0676 (46-215)||(7014-7183)
[»] scaffold0647 (1 HSPs)
scaffold0647 (46-213)||(1908-2075)
[»] scaffold0017 (2 HSPs)
scaffold0017 (46-190)||(19229-19373)
scaffold0017 (50-215)||(57021-57186)
[»] scaffold1715 (1 HSPs)
scaffold1715 (101-160)||(13-72)
[»] scaffold0081 (3 HSPs)
scaffold0081 (95-190)||(19651-19746)
scaffold0081 (110-190)||(35090-35170)
scaffold0081 (46-158)||(50432-50544)
[»] scaffold0093 (1 HSPs)
scaffold0093 (53-162)||(27268-27377)
[»] scaffold1710 (1 HSPs)
scaffold1710 (46-78)||(864-896)
[»] scaffold0507 (1 HSPs)
scaffold0507 (47-162)||(9971-10086)
[»] scaffold0501 (1 HSPs)
scaffold0501 (53-189)||(3201-3337)
[»] scaffold0396 (1 HSPs)
scaffold0396 (54-189)||(5039-5174)
[»] scaffold0102 (1 HSPs)
scaffold0102 (129-221)||(40781-40873)


Alignment Details
Target: chr6 (Bit Score: 148; Significance: 3e-78; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 46 - 221
Target Start/End: Complemental strand, 34645034 - 34644859
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||    
T  34645034 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttatcaggaatgcaaattctgcctctgaatctcaacaca 34644935  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttgatgtcca 221  Q
    ||||||||||||||||||||||| ||| ||||||||||||| ||| |||||||||||||||||||||||| |||||    
T  34644934 ccgtgttcatcaaccttgaaatcaccatcttcagtttgattgctatcaatcattaaatccacaaacttgacgtcca 34644859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 19880131 - 19880300
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  19880131 cggatggatactcaagctactcttgtggctttcttccaaaatcaaccttttcatctcatcgttgttaggaatacaaattctgcctctgaacctcaacaca 19880230  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || ||||||||||| |||||||| | | ||||||| ||||||||| ||| ||||||||||||||||||||    
T  19880231 ccttgttcatcaactttgaaatcactatcttcagtctgattactatcaaccattaaatccacaaacttga 19880300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 18795523 - 18795692
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    ||||||||||||||||||||||||||||||||||||||| |||||  |||||| |||||| ||||| ||||| |||||||| ||||||||||||||||||    
T  18795523 cggatggatactcaagctactcttgtgactttcttccaagatcaactttttcaactcatcattgtccggaatacaaattctacctctgaacctcaacaca 18795622  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || ||||||||||| |||||||| | | |||||| ||||||||||  || ||||||||||||||||||||    
T  18795623 ccttgttcatcaactttgaaatcactatcttcagattgattactataaaacattaaatccacaaacttga 18795692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 25769024 - 25769193
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||  ||||||||||||||||||||||  |||||| ||||||  | |||||||| |||||||| ||||| ||||||||||||    
T  25769024 cggatgaatacttaagctacttctgtgactttcttccaaaatcaactttttcaactcatcactatcaggaatacaaattcttcctctaaacctcaacaca 25769123  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| || ||| ||||| ||||||||||| ||| ||||||||||||||||||||    
T  25769124 ccctgatcatcaaccttgaagtcaccatcttcattttgattactagcaaccattaaatccacaaacttga 25769193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 69 - 215
Target Start/End: Original strand, 21472457 - 21472603
Alignment:
Q  69 tgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatc 168  Q
    ||||||||||||| ||||||||  |||||| ||||||  | ||||||||||||||| | ||||||||||||||||| || || |||||||||||||| ||    
T  21472457 tgtgactttcttctaaaatcaactttttcaactcatcactatcaggaatgcaaattattcctctgaacctcaacacgccctgatcatcaaccttgaagtc 21472556  T
Q  169 gccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
     | | ||||||||||||||||| ||| ||| ||||||||||||||||    
T  21472557 actatcttcagtttgattactagcaaccatcaaatccacaaacttga 21472603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 19435835 - 19435954
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||| |||||||||    
T  19435835 cggatgaatactcaagctactcttgtgactttattctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaatctcaacaca 19435934  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||| ||||||||    
T  19435935 ccctgatcatccaccttgaa 19435954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 19488720 - 19488553
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || |||||||| | ||||||||||| ||| |||||||||    
T  19488720 cggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatacgaattctgcctcggaatctcaacaca 19488621  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || |||||||||| ||| || ||| ||||||||||||||||| ||| ||  || |||||||||||    
T  19488620 ccttgatcatcaacctggaagtcaccatcttcagtttgattactagcaaccaacaagtccacaaactt 19488553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 15460170 - 15460338
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||||||  | ||||| ||||||||||| ||||||||  | ||||  || || ||||| ||||| |||||||||||||| || ||||| ||||    
T  15460170 ggatgaatactcaaattgctcttatgactttcttctaaaatcaacttcttcaattcttcattgtcgggaatacaaattctgcctctaaatctcaatacac 15460269  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | ||||||||||| |||||||| ||| | |||| |||||||||| ||| ||||||||||||||||||||    
T  15460270 cttgttcatcaactttgaaatcaccatcctcagcttgattactatcaaccattaaatccacaaacttga 15460338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 5296647 - 5296535
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||||||| ||||||||| ||||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||||| || |    
T  5296647 atactcaagctactcttgtaactttcttctaaaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatacaccctgat 5296548  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  5296547 catcaaccttgaa 5296535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 19454253 - 19454369
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||| |||||||||||||||| || ||||||||| |||||| ||| || |  |||||||| |||||||| ||||||||||||||||||    
T  19454253 cggatgaatacttaagttactcttgtgactttcctcgaaaatcaattttttcaactcgtcatcatcaggaatacaaattcttcctctgaacctcaacaca 19454352  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || |||||||||||    
T  19454353 ccctgatcatcaacctt 19454369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 21563580 - 21563411
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    ||||||||| || ||| ||||| |||| ||||| || ||||| ||   ||||| |||||| || |||||||| |||||||||||||| || ||||||||     
T  21563580 cggatggatgcttaagttactcctgtggctttcctctaaaattaactgtttcaactcatcattatcaggaatacaaattctgcctctaaatctcaacacg 21563481  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || |||||||||||||||||||| | | | |||| ||||||||||  || || || ||||||||||||||    
T  21563480 ccttgttcatcaaccttgaaatcactagcctcagcttgattactagtaaccaatatatccacaaacttga 21563411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 21569439 - 21569270
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    ||||||||| || ||| ||||| |||| ||||| || ||||| ||   ||||| |||||| || |||||||| |||||||||||||| || ||||||||     
T  21569439 cggatggatgcttaagttactcctgtggctttcctctaaaattaactgtttcaactcatcattatcaggaatacaaattctgcctctaaatctcaacacg 21569340  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || |||||||||||||||||||| | | | |||| ||||||||||  || || || ||||||||||||||    
T  21569339 ccttgttcatcaaccttgaaatcactagcctcagcttgattactagtaaccaatacatccacaaacttga 21569270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 8762374 - 8762262
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||||||||| |||||||||| ||| ||||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||||| || |    
T  8762374 atactcaagctacttttgtgactttattctaaaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatacaccctgat 8762275  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  8762274 catcaaccttgaa 8762262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 14379365 - 14379246
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| | |||||||||||||||||||||||| || ||||| ||  |||||| |||||| |||||| |||| |||||||| |||||||||||||| |||    
T  14379365 cggatgaacactcaagctactcttgtgactttcctctaaaattaactttttcaactcatcattgtcacgaatacaaattcttcctctgaacctcaataca 14379266  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||| ||| ||||    
T  14379265 ccctgatcatccaccatgaa 14379246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 14380915 - 14380796
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| | |||||||||||||||||||||||| || ||||| ||  |||||| |||||| |||||| |||| |||||||| |||||||||||||| |||    
T  14380915 cggatgaacactcaagctactcttgtgactttcctctaaaattaactttttcaactcatcattgtcacgaatacaaattcttcctctgaacctcaataca 14380816  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||| ||| ||||    
T  14380815 ccctgatcatccaccatgaa 14380796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 10468290 - 10468178
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| |||||||||||||| ||||| || |    
T  10468290 atactcaacctactcttgtgactctcttctagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcaaaacaccctgat 10468191  T
Q  153 catcaaccttgaa 165  Q
    ||||||| |||||    
T  10468190 catcaactttgaa 10468178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 28282261 - 28282142
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  28282261 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 28282162  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  28282161 ccctgatcatcaaccttgaa 28282142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 18197173 - 18197057
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| |||| ||||||||||||| ||| ||||| |||||||| ||||  || ||||||||    
T  18197173 cggatgaatactcaagctacttctgtgactctcttcaagaatca-tcttcttcatctcatcgtcgtctggaatacaaattctacctcgaaatctcaacac 18197075  T
Q  145 accgtgttcatcaacctt 162  Q
    ||| || ||||| |||||    
T  18197074 accttgatcatcgacctt 18197057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 24365252 - 24365367
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| ||||| |||||||| || || | ||||||  | |||| ||| || || |||||||| |||| ||| ||||||||||||| |||||| || |    
T  24365252 atactcaacctactattgtgactctcctcaagaatcaacttcttcaactcttcattatcaggaatacaaactctacctctgaacctcagcacaccctgat 24365351  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  24365352 catcaaccttaaaatc 24365367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 211
Target Start/End: Original strand, 23079302 - 23079467
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||||||||||||||||||  | ||||| ||||| | ||||| |||| ||||||||||| | |||||||||  ||||||| |||| ||| ||||||||    
T  23079302 cggatggatactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtcaggaatagaaattctccctcggaatctcaacac 23079400  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaac 211  Q
     || || ||||| |  || ||||| | | ||||||| ||||||||| ||| ||  ||||| ||||||    
T  23079401 tccttgatcatcgattttaaaatcactatcttcagtctgattactagcaaccaacaaatctacaaac 23079467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 18966740 - 18966624
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttt-tcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| ||||  |||||||||| ||||||||||| |||||||| ||||  || | ||||||    
T  18966740 cggatgaatactcaagctacttctgtgactctcttcaagaatca-tcttcctcatctcatcattgtcaggaatacaaattctacctcgaaatcacaacac 18966642  T
Q  145 accgtgttcatcaacctt 162  Q
     || || |||||||||||    
T  18966641 tccctgatcatcaacctt 18966624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 19865520 - 19865664
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||| | ||||| ||||| | ||||| | | |||||||| || |  |||||||| |||||||   |||  || |||||||||    
T  19865520 cggatgaatactcaagctactcctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattcgaactcgaaatctcaacaca 19865619  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    || || ||||| ||||| || || ||| ||||||| |||||||||    
T  19865620 ccatggtcatcgaccttaaagtcaccatcttcagtctgattacta 19865664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 25609309 - 25609140
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| |||| |||||||| || | ||| ||||| ||||| || ||||  |||||||| ||    
T  25609309 cggatgaatactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcttcatcgtctggaatacaaatcctacctcgaaacctcaatac 25609211  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    ||| || ||||| | ||| ||||| ||  ||||||| ||||||||| ||| ||  || |||||||||||||    
T  25609210 accttggtcatcgatcttaaaatcaccgtcttcagtctgattactagcaaccaacaagtccacaaacttga 25609140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 22434702 - 22434871
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||| || || |   ||||||| |||||||   ||| ||| |||||||||    
T  22434702 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatttcttcatcaacaggaatacaaattcgatctcggaatctcaacaca 22434801  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    ||||| ||||| |||||||| || ||| ||||||| | ||||||| ||| ||  || || ||||||||||    
T  22434802 ccgtggtcatcgaccttgaagtcaccatcttcagtctaattactagcaaccaacaagtctacaaacttga 22434871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 22443100 - 22443269
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||| || || |   ||||||| |||||||   ||| ||| |||||||||    
T  22443100 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatttcttcatcaacaggaatacaaattcgatctcggaatctcaacaca 22443199  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    ||||| ||||| |||||||| || ||| ||||||| | ||||||| ||| ||  || || ||||||||||    
T  22443200 ccgtggtcatcgaccttgaagtcaccatcttcagtctaattactagcaaccaacaagtctacaaacttga 22443269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 147
Target Start/End: Complemental strand, 27566428 - 27566327
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||| || ||||| ||||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| ||| |||||||||    
T  27566428 cggatgaatactcaagctacttttatgactctcttcaagaatcattttcttcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacaca 27566329  T
Q  146 cc 147  Q
    ||    
T  27566328 cc 27566327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 15896928 - 15897043
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    ||||||||||||||| ||||  ||||||| ||||  | ||||| |||| ||||||||||| | ||||||||| | |||||||||||  || | ||||||     
T  15896928 ggatggatactcaagatacttgtgtgactctctttaagaatca-tcttcttcatctcatcatcgtcaggaatacgaattctgcctcgtaatcgcaacact 15897026  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || |||||||||||    
T  15897027 ccctgatcatcaacctt 15897043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 114; Significance: 6e-58; HSPs: 2)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 32983 - 32814
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  32983 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacttcaacaca 32884  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || ||||||||||| |||||||| | | | |||| ||||||||||  ||  |||||||||||||||||||    
T  32883 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaacttga 32814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 56206 - 56087
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||| ||||| |||    
T  56206 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaatctcaataca 56107  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||| ||||||||    
T  56106 ccctgatcatccaccttgaa 56087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 6e-58; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 19613634 - 19613803
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19613634 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacttcaacaca 19613733  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || ||||||||||| |||||||| | | | |||| ||||||||||  ||  |||||||||||||||||||    
T  19613734 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaacttga 19613803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 19148171 - 19148339
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| |||||| |  ||||||||||||| ||||||||  ||||||  ||||| || ||||||||||||||||| |||||||||||||||| ||    
T  19148171 ggatgaatacttaagctatttatgtgactttcttctaaaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacatac 19148270  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || ||||||||||||||||| ||| ||||||||||||||||| ||| ||||||| ||||||||||||    
T  19148271 cctgatcatcaaccttgaaatcaccatcttcagtttgattactagcaaccattaaacccacaaacttga 19148339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 20747570 - 20747738
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| |||||| |  ||||||||||||| ||||||||  ||||||  ||||| || ||||||||||||||||| |||||||||||||||| ||    
T  20747570 ggatgaatacttaagctatttatgtgactttcttctaaaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacatac 20747669  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || ||||||||||||||||| ||| ||||||||||||||||| ||| ||||||| ||||||||||||    
T  20747670 cctgatcatcaaccttgaaatcaccatcttcagtttgattactagcaaccattaaacccacaaacttga 20747738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 11387718 - 11387549
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||| ||| ||||| |||| ||||| || ||||| ||  |||||| |||||| || |||||||| ||||||||||||||||||||||||||     
T  11387718 cggatggatacttaagttactcctgtggctttcctctaaaattaactttttcaactcatcattatcaggaatacaaattctgcctctgaacctcaacacg 11387619  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || |||||||||||||||||||| | | | |||| ||||||||||  || ||||||||||||||||||||    
T  11387618 ccttgttcatcaaccttgaaatcactatcctcagcttgattactagtaaccattaaatccacaaacttga 11387549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 15101893 - 15101724
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  ||||||  |||||||| |||||||| |||||||| ||||||||||||| ||||    
T  15101893 cggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcgttatcaggaatacaaattcttcctctgaacctcagcaca 15101794  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| || | | ||||||| | ||||| ||||| ||| ||||| | ||||||||    
T  15101793 ccctgatcatcaaccttgaagtcactatcttcagtgtcattaccaacaaccatcaaatcaataaacttga 15101724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 16949755 - 16949595
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| |||| |||||| |||||||| ||||| || ||||| ||||| || |    
T  16949755 atactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgttaggaatacaaattcttcctctaaatctcaaaacaccctgat 16949656  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    ||||||||||||| || | | | ||||| | ||||| || |||||||||||| ||||||||    
T  16949655 catcaaccttgaagtcactatcctcagtgtcattaccaataatcattaaatcaacaaactt 16949595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 14285665 - 14285547
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| |||||||||||||||||||||||||| || ||||||||  |||||| |||||| ||||||||||| ||||| || |||||||| ||||||||||    
T  14285665 ggatgaatactcaagctactcttgtgactttcctctaaaatcaactttttcaactcatcattgtcaggaatacaaatcctccctctgaatctcaacacac 14285566  T
Q  147 cgtgttcatcaaccttgaa 165  Q
    | || ||||||||||||||    
T  14285565 cctgatcatcaaccttgaa 14285547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 16071584 - 16071416
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||  | || ||||| || |||||||| ||||| |  ||||| || ||| |||| |||||||| ||||||||||||||||||    
T  16071584 cggatgaatacttaagctacttctatggctttcctctaaaatcaa-ctttttaaatcatcattatcatgaatacaaattcttcctctgaacctcaacaca 16071486  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || ||||||||||||||||| ||| |||||| |||||||||| ||| ||||||||| ||||||||||    
T  16071485 ccctgatcatcaaccttgaaatcaccatcttcagcttgattactagcaaccattaaatcaacaaacttga 16071416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 697 - 578
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||| | | |||||||||||  |||    
T  697 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaatttttcttctgaacctcataaca 598  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  597 ccctgatcatcaaccttgaa 578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 12206090 - 12205923
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||  ||||||||||||| |||||||| ||||||| |||||| || |||||||| |||||||| |||| ||| |||||||||    
T  12206090 cggatgaatacttaagctacttctgtgactttcttctaaaatcaaccttttcaactcatcattatcaggaatacaaattcttcctcggaatctcaacaca 12205991  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || |||||||||||||| || | | |||||||||| || ||| | | ||  ||||||||||||||    
T  12205990 ccttgatcatcaaccttgaagtcactatcttcagtttggttgctagccaccaacaaatccacaaactt 12205923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 12456668 - 12456780
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| ||||||||||| |  ||||| || |    
T  12456668 atactcaaactactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaaccttagaacaccctgat 12456767  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  12456768 catcaaccttgaa 12456780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 14434650 - 14434769
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||| |||||||| |||||||| |||||||||    
T  14434650 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaacaca 14434749  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  14434750 ccctgatcatcaaccttgaa 14434769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 215
Target Start/End: Complemental strand, 14263511 - 14263365
Alignment:
Q  69 tgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatc 168  Q
    |||||||||| || ||||||||  ||||||  |||||  | ||||||||||||||||| |||||||||||||||||||| || |||||||||||||| ||    
T  14263511 tgtgactttcctctaaaatcaactttttcaaatcatcactatcaggaatgcaaattcttcctctgaacctcaacacaccctgatcatcaaccttgaagtc 14263412  T
Q  169 gccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
     | | ||||||||| |||||||  || ||||||||| || |||||||    
T  14263411 actatcttcagtttcattactagtaaccattaaatcaacgaacttga 14263365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 13666496 - 13666612
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || ||||| ||  ||||||  ||||| || |||||||| |||||||| ||||||||||||||||||    
T  13666496 cggatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaaatcatcattatcaggaatacaaattcttcctctgaacctcaacaca 13666595  T
Q  146 ccgtgttcatcaacctt 162  Q
     | || |||||||||||    
T  13666596 tcctgatcatcaacctt 13666612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 15341390 - 15341509
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||| ||||||| ||||| ||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||     
T  15341390 cggatgaatactcaagctactcttgtgaatttcttctaaaattaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatact 15341489  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  15341490 ccctgatcatcaaccttgaa 15341509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 18053243 - 18053124
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| || || ||||||||||| |||||||| || || || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  18053243 cggatgaatgcttaagctactcttatgactttcctctaagattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 18053144  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || |||||||||||||||||    
T  18053143 ccctgttcatcaaccttgaa 18053124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 12457606 - 12457721
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||||||||||||||| |||| ||| ||||| ||||||| |||||| || |    
T  12457606 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcgttgtcaggaatacaaactcttcctctaaacctcagcacaccttggt 12457705  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  12457706 catcaaccttaaaatc 12457721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 15625510 - 15625595
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctc 131  Q
    |||||| ||||||||||||||  ||||||||||||| | |||| ||||| ||||||||||| ||||||||||| |||||||||||||    
T  15625510 cggatgaatactcaagctacttctgtgactttcttcaagaatc-atcttcttcatctcatcattgtcaggaatacaaattctgcctc 15625595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 13022323 - 13022435
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  13022323 atactcaacctactcttgtgactctcttcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagaacaccctgat 13022422  T
Q  153 catcaaccttgaa 165  Q
    ||| |||||||||    
T  13022423 cataaaccttgaa 13022435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 190
Target Start/End: Complemental strand, 15153969 - 15153825
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||||||||||||| | ||||| ||||| | ||||| | | ||||||||||| | ||| ||||| ||||| || ||||  ||||||||||||    
T  15153969 cggatggatactcaagctactcctatgactctcttcaagaatcattttcttcatctcatcatcgtctggaatacaaatcctacctcgaaacctcaacaca 15153870  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    || || ||||| |  || ||||| | | ||||||| |||||||||    
T  15153869 ccttgatcatcgattttaaaatcactatcttcagtctgattacta 15153825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 11305546 - 11305431
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  11305546 atactcaaactactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagtacaccttgat 11305447  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  11305446 catcaactttgaaatc 11305431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 49153267 - 49153382
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  49153267 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagaacaccctgat 49153366  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  49153367 catcaactttgaaatc 49153382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 15204577 - 15204721
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| |||||||||||||| |||||||| ||||| | ||||| |||| || ||||| || | ||||||||| ||||||||||||| ||| |||||||     
T  15204577 cggatgaatactcaagctacttttgtgactctcttcaagaatca-tcttctttatctcttcatcgtcaggaatacaaattctgcctcggaatctcaacat 15204675  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
     || || ||||| |||||||| || | | ||||||| | |||||||    
T  15204676 tccctgatcatcgaccttgaagtcactatcttcagtctaattacta 15204721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 158
Target Start/End: Complemental strand, 321348 - 321237
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||||||||||||||||||  | | ||||||||| | ||||| | | ||||||||||| | ||| ||||| ||||||||  ||| ||| ||||||||||    
T  321348 ggatggatactcaagctacttctatcactttcttcaagaatcattttcttcatctcatcatcgtctggaatacaaattctatctcggaatctcaacacac 321249  T
Q  147 cgtgttcatcaa 158  Q
    | || |||||||    
T  321248 cttgatcatcaa 321237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 26117888 - 26117773
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || || |||||||| |||| | | ||||||||||||| |||||| || |    
T  26117888 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattatcaggaatacaaactttacctctgaacctcagcacaccctgat 26117789  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  26117788 catcaaccttaaaatc 26117773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 11771546 - 11771386
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgt 151  Q
    ||||||||||||||  | ||||| ||||| | ||||| |||| ||||||||||| | ||||||||| |||||||||||||  || |||| ||| || ||     
T  11771546 atactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtcaggaatacaaattctgcctcgaaatctcaccacgccttga 11771448  T
Q  152 tcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    ||||| |  || ||||| | | ||||||| ||||||||| ||||||  || |||||||||||    
T  11771447 tcatcgattttaaaatcactatcttcagtctgattactagcaatcaacaagtccacaaactt 11771386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 156
Target Start/End: Original strand, 14955519 - 14955622
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgt 151  Q
    ||||||||||||||| ||||||| ||||| | ||||| |||| || ||||| || ||||| ||||| |||||||| |||| ||| ||||||||||| ||     
T  14955519 atactcaagctactcctgtgactctcttcaagaatca-tcttcttaatctcttcattgtctggaatacaaattcttcctcggaatctcaacacaccttga 14955617  T
Q  152 tcatc 156  Q
    |||||    
T  14955618 tcatc 14955622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 53 - 156
Target Start/End: Original strand, 18178707 - 18178810
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgt 151  Q
    ||||||||||||||  | ||||||||||| | ||||| |||| || ||||| || ||||| |||||||||||||| |||| ||| ||||||||||| ||     
T  18178707 atactcaagctacttctatgactttcttcaagaatca-tcttcttaatctcttcattgtctggaatgcaaattcttcctcggaatctcaacacaccttga 18178805  T
Q  152 tcatc 156  Q
    |||||    
T  18178806 tcatc 18178810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 13967951 - 13967836
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  |||||  ||||| |||| |||| ||| ||||||||||||| |||||| || |    
T  13967951 atactcaacctactcttgtgactctcctcgagaatcaaattcttcaaatcatcactgtcaagaatacaaactcttcctctgaacctcagcacaccctgat 13967852  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| || |||||    
T  13967851 catcaactttaaaatc 13967836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 14040653 - 14040820
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||| |||||  | ||||| ||||| | | ||| | | |||||||||||   ||| ||||| |||||||| |||| ||| |||||||||    
T  14040653 cggatgaatactcaaactacttctatgactctcttcaagattcattttcttcatctcatcagcgtctggaatacaaattctacctcggaatctcaacaca 14040752  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || ||||| |  || ||||| | | ||||||| ||||||||||||| ||  ||||| ||||||||    
T  14040753 ccttgatcatcgattttaaaatcactatcttcagtctgattactaacaaccaacaaatctacaaactt 14040820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 14350683 - 14350850
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||| |||||  | ||||| ||||| | | ||| | | |||||||||||   ||| ||||| |||||||| |||| ||| |||||||||    
T  14350683 cggatgaatactcaaactacttctatgactctcttcaagattcattttcttcatctcatcagcgtctggaatacaaattctacctcggaatctcaacaca 14350782  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || ||||| |  || ||||| | | ||||||| ||||||||||||| ||  ||||| ||||||||    
T  14350783 ccttgatcatcgattttaaaatcactatcttcagtctgattactaacaaccaacaaatctacaaactt 14350850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 23505160 - 23505041
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| || | ||||    
T  23505160 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatcttagcaca 23505061  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  23505060 ccctgatcatcaaccttgaa 23505041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 116
Target Start/End: Original strand, 14130832 - 14130902
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaa 116  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||    
T  14130832 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaattcttcattgtcaggaa 14130902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 114; Significance: 6e-58; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 27364922 - 27364753
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27364922 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacttcaacaca 27364823  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || ||||||||||| |||||||| | | | |||| ||||||||||  ||  |||||||||||||||||||    
T  27364822 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaacttga 27364753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 23277376 - 23277543
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  ||||| || |||||||| |||||||| ||||||||||||||||||    
T  23277376 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaaatcatcattatcaggaatacaaattcttcctctgaacctcaacaca 23277475  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || ||||||||||||||||| | | ||||||||| ||||| ||||| ||| ||||| || |||||    
T  23277476 ccctgatcatcaaccttgaaatcactatcttcagtttcattaccaacaaccatcaaatcaacgaactt 23277543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 19651895 - 19651776
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||| ||||||||||||||||||||||||| ||||||||  |||||| |||||| |||||||||||||||||||| |||||||| ||||| |||    
T  19651895 cggatgaatattcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatgcaaattcttcctctgaatctcaataca 19651796  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    ||  | ||||| ||||||||    
T  19651795 ccccgatcatccaccttgaa 19651776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 94 - 215
Target Start/End: Complemental strand, 23099813 - 23099692
Alignment:
Q  94 tttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaaca 193  Q
    ||||| |||||| || |||||||| |||||||||||||||||||||||||| || |||||||||||||||||||| | | | |||| ||||||||||  |    
T  23099813 tttcaactcatcattatcaggaatacaaattctgcctctgaacctcaacacgccttgttcatcaaccttgaaatcactagcctcagcttgattactagta 23099714  T
Q  194 atcattaaatccacaaacttga 215  Q
    | || |||||||||||||||||    
T  23099713 accaataaatccacaaacttga 23099692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 23294535 - 23294702
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||| |||||||||||||||||||||| || | ||| ||  ||||||  | ||| |  ||||||||||||||||| |||||||| |||||||||    
T  23294535 cggatgaatattcaagctactcttgtgactttcctctagaattaactttttcaaattatcatcatcaggaatgcaaattcttcctctgaatctcaacaca 23294634  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || |||||||||||||| || | | | |||| || ||||| | ||| ||||||||||||||||||    
T  23294635 ccctgatcatcaaccttgaagtcactatcctcagcttcattaccagcaaccattaaatccacaaactt 23294702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 23111349 - 23111503
Alignment:
Q  59 aagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaa 158  Q
    ||||||||  |||||||||| || ||||||||  |||||| ||||||  ||||| ||||| |||||||||||| ||| ||||||| ||| || |||||||    
T  23111349 aagctacttatgtgactttcctctaaaatcaactttttcaactcatcactgtcaagaatgaaaattctgcctcagaatctcaacataccctgatcatcaa 23111448  T
Q  159 ccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    ||||||| || ||| ||  ||||||||||||| ||| ||  ||||||||||||||    
T  23111449 ccttgaagtcaccatctctagtttgattactagcaaccaacaaatccacaaactt 23111503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 20828866 - 20828981
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  20828866 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 20828965  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  20828966 catcaactttgaaatc 20828981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 20833592 - 20833707
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  20833592 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 20833691  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  20833692 catcaactttgaaatc 20833707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 31831265 - 31831380
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | || | ||| || ||||||||||| |||| ||| |||||||||||||||||||| || |    
T  31831265 atactcaacctactcttgtgactctcctcaagaatcaacttctttaactcctcattgtcaggaatacaaactctacctctgaacctcaacacaccctgat 31831364  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  31831365 catcaactttgaaatc 31831380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 27788341 - 27788460
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  27788341 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 27788440  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  27788441 ccctgatcatcaaccttgaa 27788460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 21325102 - 21324940
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| |||||||  |||| ||| ||||||||||| || |    
T  21325102 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattcgacctcggaatctcaacacaccatggt 21325003  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    |||| ||||| || || ||| ||||||| ||||||||| ||||||  || || ||||||||||    
T  21325002 catcgaccttaaagtcaccatcttcagtctgattactagcaatcaacaagtctacaaacttga 21324940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 24949191 - 24949309
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac-ac 146  Q
    |||| ||||| |||||||||||||||||||| || ||||||||  ||||||   |||| |  | ||||||||||||||| |||||||| |||| ||| ||    
T  24949191 gatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaaccatcatcatgaggaatgcaaattcttcctctgaatctcatcacaac 24949290  T
Q  147 cgtgttcatcaaccttgaa 165  Q
    | || ||||||||||||||    
T  24949291 catgatcatcaaccttgaa 24949309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 24676089 - 24676258
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||| ||||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| ||||||| ||||| ||| |||||||||    
T  24676089 cggatgaatactcaggctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattcggcctcggaatctcaacaca 24676188  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || ||||| ||||| || || ||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  24676189 ccatggtcatcgaccttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaaacttga 24676258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 27210015 - 27209846
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||| | ||||| ||||||||||| || |||||  | ||||  || |  ||||||||||| || ||| ||||||| || |||||||||    
T  27210015 cggatgaatactcaagttgctcttatgactttcttctaatatcaacttcttcaattctttattgtcaggaatacagattttgcctctaaatctcaacaca 27209916  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || ||||||| ||||||||| | |   ||||  |||||||||  || ||| ||||||||||||||||    
T  27209915 ccttgctcatcaatcttgaaatcactattctcagcctgattactagtaaccataaaatccacaaacttga 27209846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 24819529 - 24819362
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||||||||||||||||||  ||||||| ||||  | | ||| |||| ||||||||||| | ||| ||||| |||||||| |||| ||| ||||||||    
T  24819529 cggatggatactcaagctacttctgtgactctctttaagagtca-tcttcttcatctcatcatcgtctggaatacaaattctacctcagaatctcaacac 24819431  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
     || || ||||| || ||||| || | | |||||||  |||||||| ||| ||  ||||||||||||||    
T  24819430 tccttgatcatcgactttgaagtcactatcttcagtcggattactagcaaccaacaaatccacaaactt 24819362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 1064358 - 1064473
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || |||| |||||| |||| ||| |||||||||||||  ||||| || |    
T  1064358 atactcaaactactcttgtgactctcctcaagaatcaacttcttcaactcttcattgttaggaatacaaactctacctctgaacctcagtacaccctgat 1064457  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  1064458 catcaactttgaaatc 1064473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 24876592 - 24876482
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||| ||||||| ||||| | |||| ||||| || ||||| || ||||| ||||| |||||||| |||| ||| ||||||||    
T  24876592 cggatgaatactcaagctactcctgtgactctcttcaagaatc-atcttcttaatctcttcattgtctggaatacaaattcttcctcggaatctcaacac 24876494  T
Q  145 accgtgttcatc 156  Q
    ||| || |||||    
T  24876493 accttgatcatc 24876482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 21890559 - 21890417
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||||| |||  |||| ||||| || ||||  ||||||||||||||    
T  21890559 gatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcgtcgtctagaatacaaatcctacctcgaaacctcaacacacc 21890460  T
Q  148 gtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
     || ||||| |  || ||||| || |||||||| |||||||||    
T  21890459 ttgatcatcgattttaaaatcacctccttcagtctgattacta 21890417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 22756301 - 22756139
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||  | ||||| ||||| | ||| | | | |||||||| || |  |||||||| |||||||  |||| ||| ||||||||||| || |    
T  22756301 atactcaagctacttctatgactctcttcaagaattattttcttcatctcttcatcatcaggaatacaaattcgacctcggaatctcaacacaccatggt 22756202  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    |||| ||||| || || ||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  22756201 catcgaccttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaaacttga 22756139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 194
Target Start/End: Complemental strand, 24707261 - 24707177
Alignment:
Q  110 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaa 194  Q
    |||||||| |||||||  |||| ||| ||||||||||| || ||||| || || || || ||| ||||||| |||||||||||||    
T  24707261 tcaggaatacaaattcgacctcggaatctcaacacaccatggtcatcgactttaaagtcaccatcttcagtctgattactaacaa 24707177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 110; Significance: 1e-55; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 113559 - 113728
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    ||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||| |||| ||||||||||||| ||| |||||||||    
T  113559 cggatggatactcaagctattcttgtgactttcttccaaaatcagccttttcatctcatcgttgtcaagaatacaaattctgcctccgaatctcaacaca 113658  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    |||||||||||||||||| |||| | | |||||||||||||||||  || |||||||||||||| |||||    
T  113659 ccgtgttcatcaaccttgcaatcactatcttcagtttgattactattaaccattaaatccacaagcttga 113728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 46 - 219
Target Start/End: Complemental strand, 95308 - 95135
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||  | ||||| ||||||||||| ||||| ||  | || |  || || ||||| ||||  |||||||| ||||| || ||||| |||    
T  95308 cggatgaatactcaaattgctcttatgactttcttctaaaattaacttctttaattcttcattgtcgggaacacaaattctacctctaaatctcaataca 95209  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttgatgtc 219  Q
    || || |||||||| |||||||| ||| |||||| |||||||||| ||| ||||||||||||||||||||||||    
T  95208 ccttgctcatcaactttgaaatcaccatcttcagcttgattactatcaaccattaaatccacaaacttgatgtc 95135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 110; Significance: 1e-55; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 21680263 - 21680094
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21680263 cggatggatactcaagctgctcttgtgactttcttccaaaatcaacctttttatctcatcgttgtcaggaatgcaaattctgcctctgaacttcaacaca 21680164  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || ||||||||||| |||||||| | | | |||| ||||||||||  ||  |||||||||||||||||||    
T  21680163 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaacttga 21680094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 24619780 - 24619613
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||||||||  |||    
T  24619780 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaacctcagaaca 24619681  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || ||  |||||||||||||||||| | | ||||| | ||||| | ||| ||| ||||| ||||||||    
T  24619680 ccctgaacatcaaccttgaaatcgctatcctcagtgtcattaccagcaaccatcaaatcaacaaactt 24619613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 24716011 - 24715844
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||||||||  |||    
T  24716011 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaacctcagaaca 24715912  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || ||  |||||||||||||||||| | | ||||| | ||||| | ||| ||| ||||| ||||||||    
T  24715911 ccctgaacatcaaccttgaaatcgctatcctcagtgtcattaccagcaaccatcaaatcaacaaactt 24715844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 24749039 - 24748872
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||||||||  |||    
T  24749039 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaacctcagaaca 24748940  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || ||  |||||||||||||||||| | | ||||| | ||||| | ||| ||| ||||| ||||||||    
T  24748939 ccctgaacatcaaccttgaaatcgctatcctcagtgtcattaccagcaaccatcaaatcaacaaactt 24748872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 21890244 - 21890075
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||| ||||| |||||||||||| ||||  |||||| ||||||  | ||||||||||||||||| ||||||||||||||||||    
T  21890244 cggatgaatactaaagctacttttgtggctttcttccaaactcaactttttcaactcatcactatcaggaatgcaaattcttcctctgaacctcaacaca 21890145  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || ||| |||||||||| || | |  || ||||||||||||| ||| ||||||||| ||||||||||    
T  21890144 ccctgatcaccaaccttgaagtcactatatttagtttgattactagcaaccattaaatcgacaaacttga 21890075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 47 - 190
Target Start/End: Original strand, 21496957 - 21497100
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  ||||||  ||||| || | ||||||||||||||| |||||||||||||||||||    
T  21496957 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaaatcatccttattaggaatgcaaattcttcctctgaacctcaacacac 21497056  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    | || |||||||||||||| || ||| ||||||||| |||||||    
T  21497057 cctgatcatcaaccttgaagtcaccatcttcagtttcattacta 21497100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 190
Target Start/End: Complemental strand, 21831246 - 21831102
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| || ||||| |||||||||||||| ||||||||  |||||| |||||| || ||||| || ||||||||||||| ||| |||||||||    
T  21831246 cggatgaatacttaaactacttttgtgactttcttctaaaatcaactttttcaactcatcattatcagggatacaaattctgcctcagaatctcaacaca 21831147  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    || || |||||||||||||| || ||| ||| |||||||||||||    
T  21831146 ccttgatcatcaaccttgaagtcaccatctttagtttgattacta 21831102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 22462835 - 22463001
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||| | ||||| ||||||||||||||||||||  | ||||  || || ||||||||||| |||||||||||||| || |||||||||    
T  22462835 cggatgaatactcaagttgctcttatgactttcttccaaaatcaacttcttcaattcttcattgtcaggaatacaaattctgcctctaaatctcaacaca 22462934  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || |||| ||||||||||||||| | |   || | |||||||| | ||| ||||||||||||||||||    
T  22462935 ccttgtt-atcaaccttgaaatcactattctctgcttgattaccagcaaccattaaatccacaaactt 22463001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 53 - 213
Target Start/End: Original strand, 20774649 - 20774809
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||| | ||||| |||| |||||| ||||||||  | ||||  || || |||||||| || |||||||||||||| || ||||||||||| || |    
T  20774649 atactcaagttgctcttatgaccttcttctaaaatcaacttcttcaattcctcattgtcagggatacaaattctgcctctaaatctcaacacaccttgct 20774748  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    |||||||||||||||| |   | || | ||||||||| |||| ||||||||||||||||||    
T  20774749 catcaaccttgaaatcactctcctcggcttgattactcacaaccattaaatccacaaactt 20774809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 20822336 - 20822480
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||  ||||||| ||||||||||| ||||||||  | ||||  || || ||||| ||||  |||||||||||||| || ||||| |||    
T  20822336 cggatgaatactcaaattactcttatgactttcttctaaaatcaacttcttcaattcttcattgtcgggaacacaaattctgcctctaaatctcaataca 20822435  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    || ||||||||||| |||||||| ||| |||||| ||||||||||    
T  20822436 ccttgttcatcaactttgaaatcaccatcttcagcttgattacta 20822480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 213
Target Start/End: Complemental strand, 21563457 - 21563291
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||  || | |||||| |||||| ||  || ||| ||||||||||    
T  21563457 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcataattataaggaatacaaattatgtgtcggaatctcaacacac 21563358  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
      || |||||||||||||| || ||| ||||||||||||||||| ||| ||  || |||||||||||    
T  21563357 gttgatcatcaaccttgaagtcaccatcttcagtttgattactagcaaccaacaagtccacaaactt 21563291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 17268819 - 17268700
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| || ||||||||||||||||||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  17268819 cggatgaatgctcaagctactcttgtgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 17268720  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  17268719 ccctgatcatcaaccttgaa 17268700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 24797875 - 24797760
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || |||||||||||||||| ||| |||||||||||||| ||||| || |    
T  24797875 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatgcaaactctacctctgaacctcaaaacaccttgat 24797776  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  24797775 catcaactttgaaatc 24797760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 37542859 - 37542744
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||| | |||| ||| |||||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  37542859 atactcaacctactcttgtgactctcctcaagaatcaatttcttcaactcttcgttgtcaggaatacaaactctacctctgaacctcagtacaccctgat 37542760  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  37542759 catcaactttgaaatc 37542744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 213
Target Start/End: Complemental strand, 22235403 - 22235238
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| |||||||||||||||||||| || ||||| ||  |||||| ||| || || ||| |||| |||||||| |||||||||||||||||| |    
T  22235403 gatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaactcttcattatcatgaatacaaattcttcctctgaacctcaacacatc 22235304  T
Q  148 gtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
     || ||||| ||||| || || | | | |||| || ||||| ||||| ||| ||||| ||||||||    
T  22235303 ctgatcatcgaccttaaagtcactatcctcagcttcattaccaacaaccatcaaatcaacaaactt 22235238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 20343172 - 20343287
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  20343172 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagcacaccctgat 20343271  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  20343272 catcaaccttaaaatc 20343287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 28894420 - 28894305
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||| | ||||| |||| |||||| ||||||||  | ||||  || || |||||||| || |||||||||||||| || ||||||||||| || |    
T  28894420 atactcaagttgctcttatgaccttcttctaaaatcaacttcttcagttcctcattgtcagggatacaaattctgcctctaaatctcaacacaccttgct 28894321  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||||||||||||    
T  28894320 catcaaccttgaaatc 28894305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 28915891 - 28915776
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||| | ||||| |||| |||||| ||||||||  | ||||  || || |||||||| || |||||||||||||| || ||||||||||| || |    
T  28915891 atactcaagttgctcttatgaccttcttctaaaatcaacttcttcagttcctcattgtcagggatacaaattctgcctctaaatctcaacacaccttgct 28915792  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||||||||||||    
T  28915791 catcaaccttgaaatc 28915776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 28923246 - 28923131
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||| | ||||| |||| |||||| ||||||||  | ||||  || || |||||||| || |||||||||||||| || ||||||||||| || |    
T  28923246 atactcaagttgctcttatgaccttcttctaaaatcaacttcttcagttcctcattgtcagggatacaaattctgcctctaaatctcaacacaccttgct 28923147  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||||||||||||    
T  28923146 catcaaccttgaaatc 28923131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 48 - 213
Target Start/End: Complemental strand, 26738210 - 26738045
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| | ||||||||| |||||||| ||||  || |||||| ||||    
T  26738210 gatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcatcgtcaggaatacaaattcttcctcgaaatctcaacgcacc 26738111  T
Q  148 gtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
     || ||||| |  || ||||| ||| ||||||| ||||||||| ||||||  || |||||||||||    
T  26738110 atgatcatcgattttaaaatcaccatcttcagtctgattactagcaatcaacaagtccacaaactt 26738045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 23079567 - 23079455
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| ||||| |||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  23079567 atactcaaactacttttgtgactctcttcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagaacaccctgat 23079468  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  23079467 catcaaccttgaa 23079455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 14886469 - 14886354
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| ||| || || |    
T  14886469 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcaccccctgat 14886370  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  14886369 catcaactttgaaatc 14886354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 22503569 - 22503684
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||| ||||| || || | ||||||  | |||| |||||| ||||||||||| || | ||| |||||||||||||  ||||| || |    
T  22503569 atactcaacctactcttatgactctcctcaagaatcaacttcttcaactcatcattgtcaggaatacatactcttcctctgaacctcagaacaccctgat 22503668  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  22503669 catcaaccttaaaatc 22503684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 25848965 - 25849080
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||| ||||| || || | ||||||  | |||| |||||| ||||||||||| || | ||| |||||||||||||  ||||| || |    
T  25848965 atactcaacctactcttatgactatcatcaagaatcaacttcttcaactcatcattgtcaggaatacatactcttcctctgaacctcagaacaccctgat 25849064  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  25849065 catcaaccttaaaatc 25849080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 23473054 - 23473088
Alignment:
Q  1 tagatggatctactgcaataccaccactagaaata 35  Q
    ||||||||||||||||||||||||||| |||||||    
T  23473054 tagatggatctactgcaataccaccaccagaaata 23473088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 23517434 - 23517596
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |  | |||||| |||||||  |||| ||| ||||||||||| || |    
T  23517434 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatctttaggaatacaaattcgacctcggaatctcaacacaccatggt 23517533  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    |||| ||||| || || ||| |||| || ||||||||| ||| || ||| || ||||||||||    
T  23517534 catcgaccttaaagtcaccatcttctgtctgattactagcaaccaataagtctacaaacttga 23517596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 18776671 - 18776840
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| ||| |||||||||    
T  18776671 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacaca 18776770  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    ||||| || || || || || ||  |  ||||||| ||||||||| ||| ||  ||||| ||||||||||    
T  18776771 ccgtgatcgtcgactttaaagtcatcgtcttcagtctgattactagcaaccaacaaatctacaaacttga 18776840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 23441111 - 23441280
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| || || | ||||| | | |||||||| || | |||| |||||||||| |  |||| ||| |||||||||    
T  23441111 cggatgaatactcaagctacttctatgactctcctcaagaatcattttcttcatctcttcatcgtcacgaatgcaaatccgacctcggaatctcaacaca 23441210  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || ||||| || || || || ||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  23441211 ccatggtcatcgactttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaaacttga 23441280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 23574694 - 23574799
Alignment:
Q  110 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaa 209  Q
    |||||||| ||||||| ||||| ||| ||||||||||| || ||||| ||||| ||||| ||| | ||| | ||||||||| ||| ||  || || ||||    
T  23574694 tcaggaatacaaattcggcctcggaatctcaacacaccatggtcatcgaccttaaaatcaccatcctcaatctgattactagcaaccaacaagtctacaa 23574793  T
Q  210 acttga 215  Q
    ||||||    
T  23574794 acttga 23574799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 215
Target Start/End: Original strand, 20800398 - 20800518
Alignment:
Q  95 ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaa 194  Q
    |||||||| || | ||||||||| |||||||  |||| ||| ||||||||||| || ||||| || || || || ||| ||||||| ||||||||| |||    
T  20800398 ttcatctcttcatcgtcaggaatacaaattcgacctcggaatctcaacacaccatggtcatcgactttaaagtcaccatcttcagtctgattactagcaa 20800497  T
Q  195 tcattaaatccacaaacttga 215  Q
     ||  || || ||||||||||    
T  20800498 ccaacaagtctacaaacttga 20800518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 1e-55; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 14087271 - 14087440
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  14087271 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttgtctggaatgcaaattctgcctctgaacttcaacaca 14087370  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || ||||||||||| |||||||| | | | |||| ||||||||||  ||  |||||||||||||||||||    
T  14087371 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaacttga 14087440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 46 - 212
Target Start/End: Complemental strand, 13971651 - 13971485
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  13971651 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttgtcgggaatgcaaattctgcctctgaacttcaacaca 13971552  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaact 212  Q
    || ||||||||||| |||||||| | | | |||| ||||||||||  ||  ||||||||||||||||    
T  13971551 ccttgttcatcaactttgaaatcactatcctcagcttgattactattaactattaaatccacaaact 13971485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 14574521 - 14574690
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||||||||||||||||| | ||||||  |||||| ||||||  | ||||||||||||||||| ||||||||||||||||||    
T  14574521 cggatgaatacttaagctactcttgtgactttcttctagaatcaactttttcaactcatcactatcaggaatgcaaattcttcctctgaacctcaacaca 14574620  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| || | | ||||||||| | ||| | ||| ||| ||||| ||||||||||    
T  14574621 ccatgatcatcaaccttgaagtcactatcttcagtttcactaccagcaaccatcaaatcaacaaacttga 14574690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 10419575 - 10419407
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||||||  ||||||| ||||||||||| ||||||||  | ||||  || || ||||| ||||  |||||||||||||| || ||||| ||||    
T  10419575 ggatgaatactcaaattactcttatgactttcttctaaaatcaacttcttcaattcttcattgtcgggaacacaaattctgcctctaaatctcaatacac 10419476  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | ||||||||||| |||||||| ||| | |||| |||||||||| ||| ||||||||||||||||||||    
T  10419475 cttgttcatcaactttgaaatcaccatcctcagcttgattactatcaaccattaaatccacaaacttga 10419407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 213
Target Start/End: Complemental strand, 18133876 - 18133710
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||||||||||||||||||||||| ||  |||||| ||| || || |||||||| | |||||| ||||||||||| |||||||    
T  18133876 ggatgaatacttaagctactcttgtgactttcttccaaaattaactttttcaactcgtcattatcaggaatactaattcttcctctgaaccttaacacac 18133777  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    | || ||||||||||| || || | | | ||||||| ||||| ||||||||| ||||  ||||||||    
T  18133776 cctgatcatcaaccttaaagtcactatcctcagtttcattaccaacaatcatcaaatgaacaaactt 18133710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 53 - 210
Target Start/End: Complemental strand, 13300046 - 13299889
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||||||||||||||||||||| || ||||||||  ||||||   |||| |  |||||||| |||||||| |||||||||||||||||||| || |    
T  13300046 atactcaagctactcttgtgactttcctctaaaatcaactttttcaaaccatcatcatcaggaatacaaattcttcctctgaacctcaacacaccctgat 13299947  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaa 210  Q
    |||||||||||||||| | |   ||||||| || || | ||||||||||||| |||||    
T  13299946 catcaaccttgaaatcactattctcagtttcataaccagcaatcattaaatcaacaaa 13299889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 53 - 210
Target Start/End: Complemental strand, 13310704 - 13310547
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||||||||||||||||||||| || ||||||||  ||||||   |||| |  |||||||| |||||||| |||||||||||||||||||| || |    
T  13310704 atactcaagctactcttgtgactttcctctaaaatcaactttttcaaaccatcatcatcaggaatacaaattcttcctctgaacctcaacacaccctgat 13310605  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaa 210  Q
    |||||||||||||||| | |   ||||||| || || | ||||||||||||| |||||    
T  13310604 catcaaccttgaaatcactattctcagtttcataaccagcaatcattaaatcaacaaa 13310547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 16380459 - 16380340
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||| |||||||| |||||||| |||||||||    
T  16380459 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaacaca 16380360  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  16380359 ccctgatcatcaaccttgaa 16380340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 31694717 - 31694598
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||||||||||||||| || ||||||||  ||||||  || || |  ||||||||||||||||| |||||||| |||||||||    
T  31694717 cggatgaatactcaagctactcttgtgactttcctctaaaatcaactttttcaattcgtcatcatcaggaatgcaaattcttcctctgaatctcaacaca 31694618  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  31694617 ccctgatcatcaaccttgaa 31694598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 53 - 210
Target Start/End: Complemental strand, 13320026 - 13319869
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| ||||||||||||||||| || ||||||||  ||||||   |||| |  |||||||| |||||||| |||||||||||||||||||| || |    
T  13320026 atactcaatctactcttgtgactttcctctaaaatcaactttttcaaaccatcatcatcaggaatacaaattcttcctctgaacctcaacacaccctgat 13319927  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaa 210  Q
    |||||||||||||||| | |   ||||||| || || | ||||||||||||| |||||    
T  13319926 catcaaccttgaaatcactattctcagtttcataaccagcaatcattaaatcaacaaa 13319869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 15228247 - 15228414
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || ||||||||  |||||||  ||| ||| |||||||||    
T  15228247 cggatgaatacttaagctacttctgtgactttcttctaaaatcaacgttttcaactcatcattatcaggaatagaaattcttactcggaatctcaacaca 15228346  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || |||||||||||||| || | | |||||||||| |||||| | | ||  ||||||||||||||    
T  15228347 ccttgatcatcaaccttgaagtcactatcttcagtttggttactagccaccaacaaatccacaaactt 15228414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 31939501 - 31939620
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||| |||||||||||| || ||||||||  ||||||  || || |  ||||||||||||||||| |||||||| |||||||||    
T  31939501 cggatgaatactcaagctacccttgtgactttcctctaaaatcaactttttcaattcgtcatcatcaggaatgcaaattcttcctctgaatctcaacaca 31939600  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  31939601 ccctgatcatcaaccttgaa 31939620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 11303302 - 11303188
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| |||||||||||||||||||| ||||| || ||| |||| ||||| |  ||||| || ||||||||||||||||| ||||||||||| ||||||||    
T  11303302 gatgaatactcaagctactcttgtgcctttcctctaaactcaaccttttgaaatcatcattatcaggaatgcaaattcttcctctgaaccttaacacacc 11303203  T
Q  148 gtgttcatcaacctt 162  Q
     || |||||||||||    
T  11303202 ctgatcatcaacctt 11303188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 17493235 - 17493397
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||| |||||||||||||||||||| || ||||||||  |||||| ||| || || |||||||| |||||||| ||||| |||||||||||||| || |    
T  17493235 atacttaagctactcttgtgactttcctctaaaatcaactttttcaactcgtcattatcaggaatacaaattcttcctctaaacctcaacacaccctgat 17493334  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    |||||||||| || || | | ||||||| | | ||| | ||| ||| ||||| ||||||||||    
T  17493335 catcaacctttaagtcactatcttcagtgtcactaccagcaaccatcaaatcaacaaacttga 17493397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 16827732 - 16827565
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| |||||||| |||||  |||| || ||||||||  ||||||  ||||| || ||| |||| |||||| | ||||||||||||||||||||    
T  16827732 gatgaatacttaagctacttttgtgggtttcctctaaaatcaactttttcaaatcatcattatcatgaatacaaatttttcctctgaacctcaacacacc 16827633  T
Q  148 gtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
     || |||||||||||||| ||   | ||||||||| ||||||| ||| ||| ||||| ||||||||||    
T  16827632 ttgatcatcaaccttgaagtcattatcttcagtttcattactagcaaccatcaaatcaacaaacttga 16827565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 47124549 - 47124664
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || |||||||||||||||| ||| |||||||||||||||||||| || |    
T  47124549 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcctcattgtcaggaatgcaaactctacctctgaacctcaacacaccctgat 47124648  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  47124649 catcaactttgaaatc 47124664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 59 - 213
Target Start/End: Original strand, 15234128 - 15234282
Alignment:
Q  59 aagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaa 158  Q
    ||||||||  ||||||||||||| ||||||||  |||||| |||||| || ||||||||  |||||||  ||| ||| ||||||||||| || |||||||    
T  15234128 aagctacttctgtgactttcttctaaaatcaacgttttcaactcatcattatcaggaatagaaattcttactcggaatctcaacacaccttgatcatcaa 15234227  T
Q  159 ccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    ||||||| || | | |||||||||| |||||| | | ||  ||||||||||||||    
T  15234228 ccttgaagtcactatcttcagtttggttactagccaccaacaaatccacaaactt 15234282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 16329184 - 16329069
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| |||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  16329184 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcatcattgtcaggaatacaaactcttcctctgaacctcagcacaccctgat 16329085  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  16329084 catcaaccttaaaatc 16329069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 4679036 - 4679155
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  4679036 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 4679135  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || |||||||||||||||||    
T  4679136 ccctgttcatcaaccttgaa 4679155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 8758613 - 8758494
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  8758613 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 8758514  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || |||||||||||||||||    
T  8758513 ccctgttcatcaaccttgaa 8758494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 10384573 - 10384688
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  10384573 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 10384672  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  10384673 catcaaccttaaaatc 10384688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 110 - 213
Target Start/End: Complemental strand, 12359994 - 12359891
Alignment:
Q  110 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaa 209  Q
    ||||||||||||||||| |||||||| ||||||||||| || |||||||||||||| || | | | |||||   ||||| ||||| ||||||||| ||||    
T  12359994 tcaggaatgcaaattcttcctctgaatctcaacacaccctgatcatcaaccttgaagtcactatcctcagtgccattaccaacaaccattaaatcaacaa 12359895  T
Q  210 actt 213  Q
    ||||    
T  12359894 actt 12359891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 28754923 - 28755038
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  28754923 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 28755022  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  28755023 catcaactttgaaatc 28755038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 41178120 - 41178239
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| || || ||||||||||| |||||||| || |  |||||  ||||||| || || || |||||||| |||||||| |||||||  |||||||||    
T  41178120 cggatgaatgcttaagctactcttatgactttcctctaggatcaactttttcatttcttcattatcaggaatacaaattctacctctgattctcaacaca 41178219  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || |||||||||||||||||    
T  41178220 ccctgttcatcaaccttgaa 41178239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 15248735 - 15248820
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctc 131  Q
    |||||| ||||||||||||||  | ||||||||||| | |||| ||||| ||||||||||||| ||||||||| |||||||||||||    
T  15248735 cggatgaatactcaagctacttctatgactttcttcaagaatc-atcttcttcatctcatcgtcgtcaggaatacaaattctgcctc 15248820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 11960693 - 11960584
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| ||||| | |||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  11960693 atactcaaactactatcgtgactctcttcaagaatcaacttcttcaaatcatcattgtcaggaatacaaaatcttcctctgaacctcagcacaccctgat 11960594  T
Q  153 catcaacctt 162  Q
    ||||||||||    
T  11960593 catcaacctt 11960584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 16338036 - 16337927
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||| ||||| || || | ||||||  | ||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  16338036 atactcaacctactcttatgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagcacaccctgat 16337937  T
Q  153 catcaacctt 162  Q
    ||||||||||    
T  16337936 catcaacctt 16337927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 165
Target Start/End: Complemental strand, 16836040 - 16835922
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaa-tcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    ||||| |||||||||||||||||||||||||| || ||||| || | |||| || || || ||||||||||| |||||||| |||||||| || || ||     
T  16836040 ggatgaatactcaagctactcttgtgactttcctctaaaattaacttttttgat-tcttcattgtcaggaatacaaattctacctctgaatcttaatact 16835942  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || |||||||| |||||    
T  16835941 ccctgatcatcaactttgaa 16835922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 90
Target Start/End: Complemental strand, 12360073 - 12360029
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaa 90  Q
    |||||| |||||||||||||||||||||||||| || ||||||||    
T  12360073 cggatgaatactcaagctactcttgtgactttcctctaaaatcaa 12360029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 150
Target Start/End: Original strand, 16692752 - 16692856
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | ||||||||||  | | ||||||||||||||| |  |||| ||| |||||||||    
T  16692752 cggatgaatactcaagctacttctatgactctcttcaagaatcatttttttcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacaca 16692851  T
Q  146 ccgtg 150  Q
    |||||    
T  16692852 ccgtg 16692856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 44777845 - 44777964
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| || | ||||    
T  44777845 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatcttagcaca 44777944  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  44777945 ccctgatcatcaaccttgaa 44777964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 131
Target Start/End: Original strand, 15209479 - 15209564
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctc 131  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||||| |||| |||  |||||||||||||    
T  15209479 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcgtcgtcaagaaaacaaattctgcctc 15209564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 102; Significance: 8e-51; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 49820 - 49651
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  49820 cggatggatactcaagctgctcttgtgactttcttccaaaatcaaccttttcatctcatcgttatcaggaatgcaaattctgcatctgaacttcaacaca 49721  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || ||||||||||| |||||||| | | | |||| || |||||||  ||  |||||||||||||||||||    
T  49720 ccttgttcatcaactttgaaatcactatcctcagcttcattactattaactattaaatccacaaacttga 49651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 9474 - 9584
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||||||||||||||||||| ||||||| ||||| | |||| ||||| || ||||| || ||||| ||||| |||||||| |||| ||| |||| |||    
T  9474 cggatggatactcaagctactcctgtgactctcttcaagaatc-atcttcttaatctcttcattgtctggaatacaaattcttcctcggaatctcaccac 9572  T
Q  145 accgtgttcatc 156  Q
    ||| || |||||    
T  9573 accttgatcatc 9584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 15936 - 16046
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||||||||||||||||||| ||||||| ||||| | |||| ||||| || ||||| |  ||||| ||||| |||||||| |||| ||| |||| |||    
T  15936 cggatggatactcaagctactcctgtgactctcttcaagaatc-atcttcttaatctctttattgtctggaatacaaattcttcctcggaatctcaccac 16034  T
Q  145 accgtgttcatc 156  Q
    ||| || |||||    
T  16035 accttgatcatc 16046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 99; Significance: 5e-49; HSPs: 2)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 19856 - 20018
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||||||||||||||||||||| || ||||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  19856 atactcaagctactcttgtgactttcctctaaaattaactttttcatctcatcattgtcaggaatgcaaattctgcctctgaacctcaacacaccttgtt 19955  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    ||||||| |||||||| | | |||||| |||||||| |  || ||||||||||||||||||||    
T  19956 catcaactttgaaatcactatcttcagcttgattaccattaaccattaaatccacaaacttga 20018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 53 - 215
Target Start/End: Original strand, 24018 - 24180
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||||||||||||||||||||| || ||||| ||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||    
T  24018 atactcaagctactcttgtgactttcctctaaaattaactttttcatctcatcattgtcaggaatgcaaattctgcctctgaacctcaacacaccttgtt 24117  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    ||||||| |||||||| | | |||||| |||||||| |  || ||||||||||||||||||||    
T  24118 catcaactttgaaatcactatcttcagattgattacaataaaacattaaatccacaaacttga 24180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 63 - 215
Target Start/End: Complemental strand, 6974 - 6822
Alignment:
Q  63 tactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaacctt 162  Q
    ||||||||||||||||||| |||||||  |||||||||||||| ||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  6974 tactcttgtgactttcttctaaaatcagccttttcatctcatcattgtcaggaacacaaattctgcctctgaacctcaacacaccgtgttcatcaacctt 6875  T
Q  163 gaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    |||||| | | |||||||||||||||||  || | |||||||||||| |||||    
T  6874 gaaatcactatcttcagtttgattactattaacccttaaatccacaagcttga 6822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 8e-48; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 19852447 - 19852615
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || ||||||||||||||||| |||||||||||||||||||    
T  19852447 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatgcaaattcttcctctgaacctcaacacac 19852546  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || |||||| |||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  19852547 cctgatcatcatccttgaaatcaccatcttcagtttgaatactagcaatcattaaatccacaaacttga 19852615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 19858483 - 19858651
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || ||||||||||||||||| |||||||||||||||||||    
T  19858483 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatgcaaattcttcctctgaacctcaacacac 19858582  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || |||||| |||||||||| ||| ||||||||||| ||||| ||||||||||||||||||||||||    
T  19858583 cctgatcatcatccttgaaatcaccatcttcagtttgaatactagcaatcattaaatccacaaacttga 19858651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 21841453 - 21841621
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  ||||||  ||||| || |||||||||||||| || |||||||||||||||||||    
T  21841453 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaaatcatcattatcaggaatgcaaatccttcctctgaacctcaacacac 21841552  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || ||||||||||||||||| ||  ||||||||| ||||||| ||| ||||||||||||||||||||    
T  21841553 cctgatcatcaaccttgaaatcaccctcttcagtttaattactagcaaccattaaatccacaaacttga 21841621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 168
Target Start/End: Original strand, 1267274 - 1267395
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||| ||||||||||    
T  1267274 ggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaatctcaacacac 1267373  T
Q  147 cgtgttcatcaaccttgaaatc 168  Q
    | || |||||||||||||||||    
T  1267374 cctgatcatcaaccttgaaatc 1267395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 20009665 - 20009497
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || ||| |||| |||||||| |||||||||||||||||||    
T  20009665 ggatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcatcattatcaagaatacaaattcttcctctgaacctcaacacac 20009566  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || |||||||||||||| || ||  |||||||| ||||||||  || |||||||||||||| |||||    
T  20009565 cttgatcatcaaccttgaagtcaccctcttcagttcgattactagtaaccattaaatccacaagcttga 20009497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 31416220 - 31416053
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||| ||||| ||     
T  31416220 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaatctcaatacg 31416121  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || |||||||||||||| || | | | ||||| | ||||| |  |||||||||||| ||||||||    
T  31416120 ccctgatcatcaaccttgaagtcactatcctcagtgtcattaccagtaatcattaaatcaacaaactt 31416053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 23655962 - 23656131
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||| |||||||| ||||||  ||||||  ||||| || ||||||||||||||||| ||||||||||||||||||    
T  23655962 cggatgaatacttaagctactcttgtgaccttcttccagaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacaca 23656061  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || ||||||||||| || || | | | ||||||| ||||| | ||| ||| ||||| ||||||||||    
T  23656062 ccctgatcatcaaccttaaagtcactatcctcagtttcattaccagcaaccatcaaatcaacaaacttga 23656131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 69 - 215
Target Start/End: Complemental strand, 20985270 - 20985124
Alignment:
Q  69 tgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatc 168  Q
    ||||||||||||||||||||||  |||||| |||||| || | |||||| |||||||| ||||| |||||||||||||| || |||||||||||||| ||    
T  20985270 tgtgactttcttccaaaatcaactttttcaactcatcatttttaggaatacaaattcttcctctaaacctcaacacaccctgatcatcaaccttgaagtc 20985171  T
Q  169 gccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
     ||| ||||||||| |||||||  ||  |||||||| ||||||||||    
T  20985170 accatcttcagtttcattactagtaactattaaatcaacaaacttga 20985124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 20389134 - 20389278
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||   ||||||||||||| ||||||||  |||||| |||||| || |||||||| ||||||||||||| ||| |||||||||    
T  20389134 cggatgaatacttaagctacgtatgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatacaaattctgcctcggaatctcaacaca 20389233  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    || || |||||||||||||| || | | ||||||||||| |||||    
T  20389234 ccttgatcatcaaccttgaagtcactatcttcagtttgaatacta 20389278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 20975390 - 20975278
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||||||||||||||||||||| || ||||||||  ||||||   |||| |  ||||||||||||||||| |||||||||||||||||||| || |    
T  20975390 atactcaagctactcttgtgactttcctctaaaatcaactttttcaaaccatcatcatcaggaatgcaaattcttcctctgaacctcaacacaccctgat 20975291  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  20975290 catcaaccttgaa 20975278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 211
Target Start/End: Original strand, 22371982 - 22372140
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||| ||||||||  ||||||||||||| | ||||||  |||||| ||||||  | ||||||||| | ||||| |||||||||||||||||||   | |    
T  22371982 atacttaagctacttctgtgactttcttctataatcaactttttcaactcatcactatcaggaatgaatattcttcctctgaacctcaacacacacagat 22372081  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaac 211  Q
    |||||||||||||||| ||   ||| |||||||||||| ||| ||||||||||||||||    
T  22372082 catcaaccttgaaatcacccttttcggtttgattactagcaaccattaaatccacaaac 22372140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 22051898 - 22052017
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||| ||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||     
T  22051898 cggatgaatactcaacctactcttgtgactttcctctaaaattaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatact 22051997  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  22051998 ccctgatcatcaaccttgaa 22052017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 803412 - 803297
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  803412 atactcaacctactcttgtgactctcctctagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 803313  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  803312 catcaactttgaaatc 803297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 6604700 - 6604815
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| ||||||||||| || | ||| || |||||||||| |||||| || |    
T  6604700 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacagactctacccctgaacctcagcacaccctgat 6604799  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||||||||||||    
T  6604800 catcaaccttgaaatc 6604815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 6680153 - 6680268
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| ||||||||||| || | ||| || |||||||||| |||||| || |    
T  6680153 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacagactctacccctgaacctcagcacaccctgat 6680252  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||||||||||||    
T  6680253 catcaaccttgaaatc 6680268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 12305800 - 12305915
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||| ||||| ||||| | ||| ||  | |||| |||||| |||||||||||||| | ||| | |||||||||||| ||||| || |    
T  12305800 atactcaacctactcttatgactctcttcaagaattaacttcttcaactcatcattgtcaggaatgcatactcttcatctgaacctcaaaacaccctgat 12305899  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  12305900 catcaaccttaaaatc 12305915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 31570588 - 31570469
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| || || ||||||||||| |||||||| || |  || ||  ||||||| || || || |||||||| |||||||| |||||||| |||||||||    
T  31570588 cggatgaatgcttaagctactcttatgactttcctctaggattaactttttcatttcttcattatcaggaatacaaattctacctctgaatctcaacaca 31570489  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  31570488 ccctgatcatcaaccttgaa 31570469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 162
Target Start/End: Complemental strand, 29303162 - 29303056
Alignment:
Q  56 ctcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcat 155  Q
    ||||| |||||||||||||| ||| | | ||||||| | ||||  ||||| ||||||||||| |||| ||| | ||||||||||| |||||| || ||||    
T  29303162 ctcaacctactcttgtgactctctacaagaatcaatttcttcaaatcatcattgtcaggaatacaaactcttcatctgaacctcagcacaccctgatcat 29303063  T
Q  156 caacctt 162  Q
    |||||||    
T  29303062 caacctt 29303056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 162
Target Start/End: Original strand, 27355590 - 27355698
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | |||||| | || || ||||||| |||||||||| |||| ||| |||||||| ||||  ||||| || |    
T  27355590 atactcaatctactcttgtgactatcttcaagaatcaaccctt-caactcatcgctgtcaggaatacaaactctccctctgaatctcagtacaccctgat 27355688  T
Q  153 catcaacctt 162  Q
    ||||||||||    
T  27355689 catcaacctt 27355698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 14566184 - 14566299
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| ||||| |||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  14566184 atactcaacctacttttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 14566283  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| || |||||    
T  14566284 catcaactttaaaatc 14566299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 16270963 - 16270848
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| ||||||||||| || | ||| |||||||||||||  ||||| || |    
T  16270963 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacatactcttcctctgaacctcagtacaccctgat 16270864  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  16270863 catcaaccttaaaatc 16270848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 22248163 - 22247996
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||| |||||||||  | ||||| ||||| | ||||| | | |||||||| ||  |||||||||| ||||||||||||  ||| ||||||||     
T  22248163 cggatgaatacacaagctacttctatgactctcttcaagaatcattttcttcatctcgtcaatgtcaggaatacaaattctgccttggaatctcaacact 22248064  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || ||||| |  || ||||| | | ||||||| ||||||||| ||||||  || |||||||||||    
T  22248063 ccctgatcatcgattttaaaatcactatcttcagtctgattactagcaatcaacaagtccacaaactt 22247996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 22988231 - 22988398
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| | || ||||||  |||||||||||| ||| ||||||||     
T  22988231 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcatcgtaaggaatagaaattctgcctcggaatctcaacacg 22988330  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || ||||| |  || ||||| | | ||||||| |||||||||  |||||  || |||||||||||    
T  22988331 ccttgatcatcgattttaaaatcactatcttcagtctgattactagaaatcaacaattccacaaactt 22988398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 16407784 - 16407622
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || | ||||||||||||||| |  |||| ||| ||||||||||| || |    
T  16407784 atactcaagctacttctatgactctcttcaagaatcattttattcatctcttcatcgtcaggaatgcaaatccgacctcggaatctcaacacaccatggt 16407685  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    |||| || || || || ||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  16407684 catcgactttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaaacttga 16407622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 19979002 - 19979171
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |||||| |||| |||||||  |||| ||| ||||| |||    
T  19979002 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcattgtcaagaatacaaattcgacctcggaatctcaataca 19979101  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || ||||| ||||| || || ||| ||||||  ||||||||| ||| ||  || || ||||||||||    
T  19979102 ccatggtcatcgaccttaaagtcaccatcttcagcctgattactagcaaccaacaagtctacaaacttga 19979171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 144
Target Start/End: Original strand, 23949954 - 23950052
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||  |||| ||||||||||| ||||||||||| ||| ||||||||| ||| | ||||||    
T  23949954 cggatgaatactcaagctacttatgtgactctcttcaagaatcg-tcttcttcatctcatcattgtcaggaatacaatttctgcctcggaatcgcaacac 23950052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 20395878 - 20395793
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctc 131  Q
    |||||| ||||||||||||||  ||||||||||||| | |||| ||||| || |||||||| ||||| |||||  ||||||||||||    
T  20395878 cggatgaatactcaagctacttctgtgactttcttcaagaatc-atcttctttatctcatcattgtcgggaatataaattctgcctc 20395793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 21166277 - 21166115
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || | ||  ||||| |||||||  |||| ||| ||||||||||| || |    
T  21166277 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcgttgggaatacaaattcgacctcggaatctcaacacaccatggt 21166178  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    |||| ||||| || || ||| ||||||| ||||||||| ||| ||  || || ||||||||||    
T  21166177 catcgaccttaaagtctccatcttcagtctgattactagcaaccaacaagtctacaaacttga 21166115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 22377200 - 22377102
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| |||||||||||| |  | ||||| ||||| | ||||| | | ||||||||||| | || |||||| ||||||||||||| ||| ||||||||    
T  22377200 cggatgaatactcaagctatttctatgactctcttcaagaatcattttcttcatctcatcatcgttaggaatacaaattctgcctcagaatctcaacac 22377102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 144
Target Start/End: Complemental strand, 22383375 - 22383277
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| |||||||||||| |  | ||||| ||||| | ||||| | | ||||||||||| | || |||||| ||||||||||||| ||| ||||||||    
T  22383375 cggatgaatactcaagctatttctatgactctcttcaagaatcattttcttcatctcatcatcgttaggaatacaaattctgcctcagaatctcaacac 22383277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 30312890 - 30312721
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| ||| |||||||||    
T  30312890 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctctgcatcgtcaggaatgcaaatccgacctcggaatctcaacaca 30312791  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    ||||| || || || || || || ||  ||||||| ||||||||| |||  |  ||||| ||||||||||    
T  30312790 ccgtgatcgtcgactttaaagtcaccgtcttcagtctgattactagcaactaacaaatctacaaacttga 30312721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 95 - 131
Target Start/End: Original strand, 23886108 - 23886144
Alignment:
Q  95 ttcatctcatcgttgtcaggaatgcaaattctgcctc 131  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  23886108 ttcatctcatcattgtcaggaatacaaattctgcctc 23886144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0108 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 48104 - 48273
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||| |||||||||||||||| ||||||  |||||| |||||| || |||||||| |||||||| ||||||||||||||||||    
T  48104 cggatgaatacttaagctacttttgtgactttcttccagaatcaactttttcaactcatcattatcaggaatacaaattcttcctctgaacctcaacaca 48203  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || |  ||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||| ||||||||||    
T  48204 ccttcatcatcaaccttgaaatcaccatcttcagtttgattactagcaaccattaaatcaacaaacttga 48273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 27524 - 27693
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||  ||||||||||||||||||||||  |||||| |||||| || ||||||||||||||||| ||||||||||||||||||    
T  27524 cggatgaatacttaagctacttctgtgactttcttccaaaatcaactttttcaactcatcattatcaggaatgcaaattcttcctctgaacctcaacaca 27623  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||| ||||| ||  ||  |||||||||||||||| ||| ||||||||||||||||||||    
T  27624 ccctgatcatcaacattgaagtcatcattttcagtttgattactagcaaccattaaatccacaaacttga 27693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 88; Significance: 2e-42; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 48338 - 48171
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| ||||||||| | || |||||||||||||||||  |||||| |||||| || |||||||| |||||||| ||||||||||||||||||||    
T  48338 gatgaatacttaagctactcctatggctttcttccaaaatcaactttttcaactcatcattatcaggaatacaaattcttcctctgaacctcaacacacc 48239  T
Q  148 gtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
     || ||||||||||||||||| | | ||||||||||||||||| ||| ||||||||| ||||||||||    
T  48238 ctgatcatcaaccttgaaatcactatcttcagtttgattactagcaaccattaaatcaacaaacttga 48171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 57153 - 57034
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||     || |  ||||||||||||||||| || ||||||||||| ||     
T  57153 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaaactgtcatcatcaggaatgcaaattcttcccctgaacctcaatact 57054  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  57053 ccctgatcatcaaccttgaa 57034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2112 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold2112
Description:

Target: scaffold2112; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 69 - 215
Target Start/End: Original strand, 1 - 147
Alignment:
Q  69 tgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatc 168  Q
    ||||||||||||| ||||||||  |||||| ||||||||| ||||||||||||||||| ||||||||||||||||| || || |||||||||||||||||    
T  1 tgtgactttcttctaaaatcaactttttcaactcatcgttatcaggaatgcaaattcttcctctgaacctcaacaccccctgatcatcaaccttgaaatc 100  T
Q  169 gccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
     ||  ||||||||||||||||| ||| ||||||||| ||||||||||    
T  101 accctcttcagtttgattactagcaaccattaaatcaacaaacttga 147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 86; Significance: 3e-41; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 89751 - 89582
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||  |||||||||||||||||||||| ||||||||  ||||||  ||||| |||||||||||||||||||| ||||||||||||||||||    
T  89751 cggatgaatactttagctactcttgtgactttcttctaaaatcaactttttcaaatcatcattgtcaggaatgcaaattcttcctctgaacctcaacaca 89652  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| || | | ||||||||| ||||||| ||| ||| ||||| ||||||||||    
T  89651 ccctgatcatcaaccttgaagtcactatcttcagtttcattactagcaaccatcaaatcaacaaacttga 89582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 90429 - 90260
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||  |||||||||||||||||||||| ||||||||  ||||||  ||||| |||||||||||||||||||| ||||||||||||||||||    
T  90429 cggatgaatactttagctactcttgtgactttcttctaaaatcaactttttcaaatcatcattgtcaggaatgcaaattcttcctctgaacctcaacaca 90330  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| || | | ||||||||| ||||||| ||| ||| ||||| ||||||||||    
T  90329 ccctgatcatcaaccttgaagtcactatcttcagtttcattactagcaaccatcaaatcaacaaacttga 90260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0244 (Bit Score: 82; Significance: 7e-39; HSPs: 1)
Name: scaffold0244
Description:

Target: scaffold0244; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 18349 - 18518
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||| |||| ||||||||||| ||||||  |||||| ||||||  | ||| ||||||||||||| ||||||||||||||||||    
T  18349 cggatgaatacttaagctacttttgttactttcttccagaatcaactttttcaactcatcactatcatgaatgcaaattcttcctctgaacctcaacaca 18448  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| || | | ||||||||||||||||| ||| ||||||||| ||||||||||    
T  18449 ccctgatcatcaaccttgaagtcactatcttcagtttgattactagcaaccattaaatcaacaaacttga 18518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 7e-39; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 15002667 - 15002498
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||| |||||||||||||| | ||||||| ||||||  ||||| || |||||||| |||||||| ||||||||||||||||||    
T  15002667 cggatgaatacttaagctacttttgtgactttcttctagaatcaattttttcaaatcatcattatcaggaatacaaattcttcctctgaacctcaacaca 15002568  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| ||   | ||||||||| ||||||| ||| ||||||||||||||||||||    
T  15002567 ccctgatcatcaaccttgaagtcattatcttcagtttcattactagcaaccattaaatccacaaacttga 15002498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 46 - 210
Target Start/End: Complemental strand, 1648580 - 1648416
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || | ||| || ||||||| |||||| || |||||||| |||||||||| |||||| |||||||||    
T  1648580 cggatgaatacttaagctactcttgtgactttcctctagaattaaccttttcaactcatcattatcaggaatacaaattctgcttctgaatctcaacaca 1648481  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaa 210  Q
    || |||||||||||||||||||| |||   ||||||| ||||| | ||||||||||||| |||||    
T  1648480 ccttgttcatcaaccttgaaatcaccattctcagtttcattaccagcaatcattaaatcaacaaa 1648416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 8706887 - 8707054
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||| |||| |||||||||||||| ||||||||  |||||| |||||| || |||||||| ||||||||||||| ||| |||||||||    
T  8706887 cggatgaatacttaagttacttttgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatacaaattctgcctcggaatctcaacaca 8706986  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || |||||||||||||| || ||| ||||||||||||||||| ||| ||  || |||||||||||    
T  8706987 ccttgatcatcaaccttgaagtcaccatcttcagtttgattactagcaaccaacaagtccacaaactt 8707054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 27901355 - 27901522
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||| ||||||| ||||||||||| ||||||||  | ||||  || || ||||||||||| |||||||||||||| || |||||||||    
T  27901355 cggatgaatactcaagttactcttatgactttcttctaaaatcaacttcttcaattcttcattgtcaggaatacaaattctgcctctaaatctcaacaca 27901454  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || |||||||||||||||||||| | | | |||| ||||||||||  || ||||||||||||||||||    
T  27901455 ccttgttcatcaaccttgaaatctctatcctcagcttgattactagtaaccattaaatccacaaactt 27901522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 15078605 - 15078773
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  | ||||||||||||| ||||||  |||||| ||||||  | ||| ||||||||||||| ||||||||||| |||||||    
T  15078605 ggatgaatacttaagctacttctatgactttcttccagaatcaactttttcaactcatcactatcaagaatgcaaattcttcctctgaaccttaacacac 15078704  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || ||||| |||||||||||  |  ||||||||||||||||| ||  ||||||||||||||||||||    
T  15078705 cctgctcatcgaccttgaaatcttcctcttcagtttgattactagcatccattaaatccacaaacttga 15078773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 47 - 213
Target Start/End: Complemental strand, 15414328 - 15414162
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| || |||||  ||||||||||||||||||||||  |||||| |||||| || | |||||| |||||||| |||| ||| ||||||||||    
T  15414328 ggatgaatacttaaactacttctgtgactttcttccaaaatcaactttttcaactcatcattatgaggaatacaaattcttcctcagaatctcaacacac 15414229  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    | || |||| |||||||||||| |   ||||||||||||||||||||| ||  ||||||||||||||    
T  15414228 cctgatcatgaaccttgaaatcactttcttcagtttgattactaacaaccaacaaatccacaaactt 15414162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 15246893 - 15247062
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| |||| ||||||  |||||| ||| || || |||||||| |||||||| || |||||||||||||||    
T  15246893 cggatgaatacttaagctactcttgtgactttcctccagaatcaactttttcaactcgtcattatcaggaatacaaattcttcccctgaacctcaacaca 15246992  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| || | | ||||||| | ||||| | ||| ||| ||||| ||||||||||    
T  15246993 ccttgatcatcaaccttgaagtcactatcttcagtgtcattaccagcaaccatcaaatcaacaaacttga 15247062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 47 - 188
Target Start/End: Original strand, 15320120 - 15320261
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  ||||||||||||  ||||||||  |||||| |||||| || ||||||||| ||||||| |||||||||||||||||||    
T  15320120 ggatgaatacttaagctacttctgtgactttcttttaaaatcaactttttcaactcatcattatcaggaatgtaaattcttcctctgaacctcaacacac 15320219  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattac 188  Q
    | || |||||||||||||  || ||| ||||||||| |||||    
T  15320220 cctgatcatcaaccttgaggtcaccatcttcagtttaattac 15320261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 15358423 - 15358307
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||  || ||||||||  ||||||  ||||| || ||||||||||||||||| ||||||||||||||||||    
T  15358423 cggatgaatacttaagctactcttgtgactttactctaaaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacaca 15358324  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || |||||||||||    
T  15358323 ccctgatcatcaacctt 15358307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 16148680 - 16148790
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||| ||||| |||||||||||||| |||| | ||||  |||||| | | || ||||||||||| |||||||| ||| ||||||||||||||    
T  16148680 cggatggatacttaagctgctcttgtgactttcctccagagtcaactttttcaacccttcattgtcaggaatacaaattcttcctatgaacctcaacaca 16148779  T
Q  146 ccgtgttcatc 156  Q
    || || |||||    
T  16148780 ccctgatcatc 16148790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 16152826 - 16152936
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||| ||||| |||||||||||||| |||| | ||||  |||||| | | || ||||||||||| |||||||| ||| ||||||||||||||    
T  16152826 cggatggatacttaagctgctcttgtgactttcctccagagtcaactttttcaacccttcattgtcaggaatacaaattcttcctatgaacctcaacaca 16152925  T
Q  146 ccgtgttcatc 156  Q
    || || |||||    
T  16152926 ccctgatcatc 16152936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 3264090 - 3263975
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  3264090 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 3263991  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  3263990 catcaactttgaaatc 3263975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 29452833 - 29452718
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  29452833 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 29452734  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  29452733 catcaactttgaaatc 29452718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 33223899 - 33224011
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||| ||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||||||| |||||||||| ||  ||||| || |    
T  33223899 atactcaacctactcttatgactctcttctagaatcaacttcttcaaatcatcattgtcaggaatacaaattcttcctctgaaccacagaacaccctgat 33223998  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  33223999 catcaaccttgaa 33224011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 44661162 - 44661047
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || || |||||||| |||| ||| ||||||||||||| |||||| || |    
T  44661162 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattatcaggaatacaaactctacctctgaacctcagcacaccctgat 44661063  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  44661062 catcaaccttaaaatc 44661047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 54 - 190
Target Start/End: Original strand, 14695090 - 14695226
Alignment:
Q  54 tactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttc 153  Q
    |||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| | ||||||||| ||||||||||||| ||| |||||||| || || ||    
T  14695090 tactcaagctacttatatgactctcttcaagaatcattttcttcatctcatcatcgtcaggaatacaaattctgcctcggaatctcaacactccctgatc 14695189  T
Q  154 atcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    ||| |  || ||||| | | ||||||||| |||||||    
T  14695190 atcgattttaaaatcactatcttcagtttaattacta 14695226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 14850409 - 14850293
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||| | ||||| | ||||| | | ||||||||||| | ||||||||| ||||||||||||| ||| ||||||||     
T  14850409 cggatgaatactcaagctacttctatgaatctcttcaagaatcattttcttcatctcatcatcgtcaggaatacaaattctgcctcggaatctcaacacg 14850310  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || ||||| |||||    
T  14850309 ccttgatcatcgacctt 14850293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 11206527 - 11206412
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| ||||| |||||||| || || | ||||||  | ||||  ||||| ||||||||||| ||||  || ||||||||||||| |||||| || |    
T  11206527 atactcaacctactattgtgactctcctcaagaatcaacttcttcaaatcatcattgtcaggaatacaaacccttcctctgaacctcagcacaccctgat 11206428  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  11206427 catcaaccttaaaatc 11206412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 20891958 - 20892073
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||||||||||| ||| |||| |||  ||||||||||||  | ||| || |    
T  20891958 atactcaacctactcttgtgactctcttcaagaatcaacttcttcaaatcatcgttgtcagaaatacaaactctttctctgaacctcaggaaaccctgat 20892057  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  20892058 catcaaccttaaaatc 20892073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 14696008 - 14696042
Alignment:
Q  1 tagatggatctactgcaataccaccactagaaata 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  14696008 tagatggatctactgcaataccactactagaaata 14696042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 15146928 - 15146759
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| || ||||  |||| ||| |||||||||    
T  15146928 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacatattcgacctcggaatctcaacaca 15146829  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || |||| ||| ||||| || || ||  ||||||| ||||||||| | | || ||| || ||||||||||    
T  15146828 ccatgtttatcgaccttaaattcaccttcttcagtctgattactagctaccaataagtctacaaacttga 15146759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 46 - 214
Target Start/End: Original strand, 3176 - 3344
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||| ||||||| |||||||| |||||   |||||| |||||| || |||||||| |||||||| ||||||||||||||||||    
T  3176 cggatgaatacttaagctacttttgtgacattcttccagaatcatctttttcaactcatcattatcaggaatacaaattcttcctctgaacctcaacaca 3275  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttg 214  Q
    || |   |||||||||||||||| ||| ||||||||||||||||| ||| ||||||||| |||||||||    
T  3276 ccctcaccatcaaccttgaaatcaccatcttcagtttgattactagcaaccattaaatcaacaaacttg 3344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 870 - 1038
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  |||| |||||| ||||||||||  ||||||  |||| ||| |||||||| |||||||| |||||||||||||||||||    
T  870 ggatgaatacttaagctacttctgtggctttctaccaaaatcaactttttcaaatcattgttatcaggaatacaaattcttcctctgaacctcaacacac 969  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || ||||||||||||||||| ||| ||||||||| ||||||| ||| ||||||||| ||||||||||    
T  970 cctgatcatcaaccttgaaatcaccatcttcagtttcattactagcaaccattaaatcaacaaacttga 1038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 2636 - 2517
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||||||||||||  |||||| | |||| |||||||| || |||||||||||||||||||||||||||    
T  2636 cggatgaatactcaagctactcttgtgactttcttccaaaatcaactttttcaacccatcattgtcagggatacaaattctgcctctgaacctcaacaca 2537  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  2536 ccctgatcatcaaccttgaa 2517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0234 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 24378 - 24211
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||| |||||||||||||| ||||||||  |||||| |||||| || |||||||| ||||||||||||| ||| |||||||||    
T  24378 cggatgaatacttaagctacttttgtgactttcttctaaaatcaactttttcaactcatcattatcaggaatacaaattctgcctcggaatctcaacaca 24279  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || |||||||||||||| || ||| ||||||||||||||||| ||| ||  || |||||||||||    
T  24278 ccttgatcatcaaccttgaagtcaccatcttcagtttgattactagcaaccaacaagtccacaaactt 24211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 46 - 136
Target Start/End: Original strand, 34188 - 34278
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaac 136  Q
    |||||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||    
T  34188 cggatggatactcaagctgctcttgtgactttcttccaaaatcaacctttttatctcatcgttgtcaggaatgcaaattctgcctctgaac 34278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2094 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold2094
Description:

Target: scaffold2094; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 211
Target Start/End: Complemental strand, 368 - 203
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||  | ||||||||||| ||||||||  |||||| ||||||  | ||| |||||||| |||| ||||||||||||||||||    
T  368 cggatgaatacttaagctacttctatgactttcttctaaaatcaactttttcaactcatcactatcaagaatgcaagttcttcctctgaacctcaacaca 269  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaac 211  Q
    || || ||||||||||||||||| ||  ||||||||||||||||| ||| ||||||||||||||||    
T  268 ccttgatcatcaaccttgaaatcaccctcttcagtttgattactagcaaccattaaatccacaaac 203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 32411 - 32580
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| |||| ||||||  ||||||  ||||| || ||||||||||||||||| ||||||||||||||||||    
T  32411 cggatgaatacttaagctactcttgtgactttcctccagaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacaca 32510  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| || | | ||||||||| ||||| | ||| ||| ||||| ||||||||||    
T  32511 ccctgatcatcaaccttgaagtcactatcttcagtttcattaccagcaaccatcaaatcaacaaacttga 32580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 29058 - 29226
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  |||| |||||||||||||||||  |||||| ||||||  | ||||||||| ||||||| |||||||||||||||||||    
T  29058 ggatgaatacttaagctacttctgtggctttcttccaaaatcaactttttcaactcatcactatcaggaatgaaaattcttcctctgaacctcaacacac 29157  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || |||||||||||||| || ||| ||||||||| |||||||  || ||||||||||||| ||||||    
T  29158 cctgatcatcaaccttgaagtcaccatcttcagtttcattactagtaaccattaaatccacacacttga 29226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 48 - 215
Target Start/End: Complemental strand, 1276 - 1110
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| |||||||||||||||||||| ||||||||||||||||| ||    
T  1276 gatgaatacttaagctacttctgtgactttcttctaaaatcaacattttcaactcatcattgtcaggaatgcaaattcttcctctgaacctcaacactcc 1177  T
Q  148 gtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
     || ||||||||||||||||| | | |||||| |  ||||||| ||| ||||||||| ||||||||||    
T  1176 ttgatcatcaaccttgaaatcactatcttcag-tccattactagcaaccattaaatcaacaaacttga 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 76; Significance: 3e-35; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 13207 - 13088
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  |||||| |||||| |||||||||||||||||||| |||||||| ||||| |||    
T  13207 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgtcaggaatgcaaattcttcctctgaatctcaataca 13108  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  13107 ccctgatcatcaaccttgaa 13088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 68370 - 68537
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||| ||||||| ||||||||||| ||||||||  | ||||  || || ||||||||||| |||||||||||||| || |||||||||    
T  68370 cggatgaatactcaagttactcttatgactttcttctaaaatcaacttcttcaattcttcattgtcaggaatacaaattctgcctctaaatctcaacaca 68469  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || |||||||||||||||||||| | | | |||| ||||||||||  || ||||||||||||||||||    
T  68470 ccttgttcatcaaccttgaaatctctatcctcagcttgattactagtaaccattaaatccacaaactt 68537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 4252 - 4143
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||| |||||||||||||||||||| || ||||| || ||||| |  ||||| || |||||||| |||||||| |||||||||||||||||||| || |    
T  4252 atacttaagctactcttgtgactttcctctaaaattaaccttttgaaatcatcattatcaggaatacaaattcttcctctgaacctcaacacaccctgat 4153  T
Q  153 catcaacctt 162  Q
    |||| |||||    
T  4152 catccacctt 4143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 47 - 215
Target Start/End: Original strand, 5431 - 5599
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||  ||||  |||||||||||||| |  |||||| ||||||  | ||||||||||||||||| |||||||||||||||||||    
T  5431 ggatgaatacttaagctacttctgtgtatttcttccaaaatcgactttttcaactcatcactatcaggaatgcaaattcttcctctgaacctcaacacac 5530  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || |||||||||||||| || ||| ||||||||| |||||||  || ||||||||||||| ||||||    
T  5531 cctgatcatcaaccttgaagtcaccatcttcagtttcattactagtaaccattaaatccacacacttga 5599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0600 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0600
Description:

Target: scaffold0600; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 4776 - 4945
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||  |||| |||||||| ||||||||  || |||  ||||| || | ||||||||||||||| ||||||||||||||||||    
T  4776 cggatgaatacttaagctacttctgtggctttcttctaaaatcaactttatcaaatcatcattattaggaatgcaaattcttcctctgaacctcaacaca 4875  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| || ||  |||| |||||||||||| ||| ||||||||| ||||||||||    
T  4876 ccctgatcatcaaccttgaagtcaccctcttcggtttgattactagcaaccattaaatcaacaaacttga 4945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 5750 - 5919
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||||||||||||||||||| ||||||  ||||||  ||||| || |||||||| |||||||| |||||||||||||||| |    
T  5750 cggatgaatacttaagctactcttgtgactttcttccagaatcaactttttcaaatcatcattatcaggaatacaaattcttcctctgaacctcaacata 5849  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||||||||||||| || | | ||||| ||| ||||| | ||| ||| ||||| ||||||||||    
T  5850 ccctgatcatcaaccttgaagtcactatcttcaatttcattaccagcaaccatcaaatcaacaaacttga 5919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 3791 - 3960
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||||||||||||||||||| ||| ||  |||||| |||||| || || |||||||||||||| ||||||||||||||||||    
T  3791 cggatgaatacttaagctactcttgtgactttcttccagaataaactttttcaactcatcattatctggaatgcaaattctccctctgaacctcaacaca 3890  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || ||  ||||||||||||| || |   ||||||||| ||||| | ||| ||| ||||| ||||||||||    
T  3891 ccctgaacatcaaccttgaagtcactctcttcagtttcattaccagcaaccatcaaatcaacaaacttga 3960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0403; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 8298 - 8332
Alignment:
Q  1 tagatggatctactgcaataccaccactagaaata 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  8298 tagatggatctactgcaataccactactagaaata 8332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0304 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0304
Description:

Target: scaffold0304; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 46 - 215
Target Start/End: Complemental strand, 2791 - 2622
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  |||||| |||||| || |||||||||||||||||  ||| |||||||||||||    
T  2791 cggatgaatacttaagctactcttgtgactttcctctaaaatcaaatttttcaactcatcattatcaggaatgcaaattctttctccgaacctcaacaca 2692  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || |  |||||||||||||| || | | ||||||||| ||||| | ||| ||| ||||| ||||||||||    
T  2691 ccctcatcatcaaccttgaagtcactatcttcagtttcattaccagcaaccatcaaatcaacaaacttga 2622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1288 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold1288
Description:

Target: scaffold1288; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 47 - 215
Target Start/End: Complemental strand, 2159 - 1991
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| |||||||||||||||||||  || ||||||||  ||||||  ||||| || |||||||| |||||||| |||| ||||||||||||||    
T  2159 ggatgaatacttaagctactcttgtgacttttctctaaaatcaactttttcaaatcatcattatcaggaatacaaattcttcctcggaacctcaacacac 2060  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || |||| ||||||||| || | | ||||||||| ||||||| ||||||| ||||| ||||||||||    
T  2059 cctgatcattaaccttgaagtcactatcttcagtttcattactagcaatcatcaaatcaacaaacttga 1991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 68; Significance: 2e-30; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 51486 - 51367
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || ||||||||||| ||||||||  |||||||||||||||||    
T  51486 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcgtcattgtcaggaatacaaattctatctctgaacctcaacaca 51387  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  51386 ccctgatcatcaaccttgaa 51367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 60520 - 60401
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || ||||||||||| ||||||||  |||||||||||||||||    
T  60520 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcgtcattgtcaggaatacaaattctatctctgaacctcaacaca 60421  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  60420 ccctgatcatcaaccttgaa 60401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 66908 - 66789
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || ||||||||||| ||||||||  |||||||||||||||||    
T  66908 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcgtcattgtcaggaatacaaattctatctctgaacctcaacaca 66809  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  66808 ccctgatcatcaaccttgaa 66789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 46 - 140
Target Start/End: Original strand, 26400 - 26494
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctca 140  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  ||||||  |||||||| |||||||| |||||||| ||||| |||||||    
T  26400 cggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcgttatcaggaatacaaattcttcctctaaacctca 26494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 47 - 213
Target Start/End: Complemental strand, 2660 - 2494
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || ||||||||||| ||||| || ||||||||||| |||||||    
T  2660 ggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcttcattgtcaggaatacaaatccttcctctgaaccttaacacac 2561  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    | || ||||| |||||||| || | | | || |||| ||||| ||||| ||||||||| ||||||||    
T  2560 cctgatcatcgaccttgaagtcactatcctctgtttcattaccaacaaccattaaatcaacaaactt 2494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 48 - 165
Target Start/End: Original strand, 8062 - 8179
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||||||||||||||||||||| || || ||||| ||  ||||||   |||| |  ||||||||| ||||||| ||||| ||||||||||||||    
T  8062 gatgaatactcaagctactcttgtgactctcctctaaaattaactttttcaaaccatcatcatcaggaatgaaaattcttcctctaaacctcaacacacc 8161  T
Q  148 gtgttcatcaaccttgaa 165  Q
     || ||||||||||||||    
T  8162 ctgatcatcaaccttgaa 8179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 67; Significance: 6e-30; HSPs: 3)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 448 - 286
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||| ||||||||  ||||||||||||| ||||||||  |||||| ||||||  | ||||||||||||||||| |||||||||||||||||||| |  |    
T  448 atacttaagctacttctgtgactttcttcgaaaatcaactttttcaactcatcactatcaggaatgcaaattcttcctctgaacctcaacacaccctaat 349  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | ||||||||||| || | | ||||||||| |||||||  || ||||||||||||| ||||||    
T  348 cgtcaaccttgaagtcacgatcttcagtttcattactagtaaccattaaatccacacacttga 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 28219 - 28318
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| |||||||||||||||||||| || ||||||||  ||||||  ||||| || | || ||| |||||||| |||| |||||||||||||||    
T  28219 gatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcattattagaaatacaaattcttcctccgaacctcaacacacc 28318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 34472 - 34571
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| |||||||||||||||||||| || ||||||||  ||||||  ||||| || | || ||| |||||||| |||| |||||||||||||||    
T  34472 gatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcattattagaaatacaaattcttcctccgaacctcaacacacc 34571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0682 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0682
Description:

Target: scaffold0682; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 883 - 1052
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||| | ||||| ||||||||||| ||||||||  | ||||  || || ||||||||||| |||||||||||||| || |||||||||    
T  883 cggatgaatactcaagttgctcttatgactttcttctaaaatcaacttcttcaattcttcattgtcaggaatacaaattctgcctctaaatctcaacaca 982  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || |||||||||||||||||||| | |   |||| ||||||||||  || ||| ||||||||||||||||    
T  983 ccttgttcatcaaccttgaaatcactattctcagcttgattactagtaaccataaaatccacaaacttga 1052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1830 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold1830
Description:

Target: scaffold1830; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 1 - 117
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  ||||||  ||||| || ||||||||||||||||| ||||||||||||||||||    
T  1 cggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacaca 100  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || |||||||||||    
T  101 ccctgatcatcaacctt 117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 65; Significance: 1e-28; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 24098971 - 24098859
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||||||||||||||||| ||||||||  |||||| | |||| ||||||||||| |||||||| |||||||||||||| ||||| || |    
T  24098971 atactcaagctactcttgtgactttcttctaaaatcaactttttcaacccatcattgtcaggaatacaaattcttcctctgaacctcaaaacaccctgat 24098872  T
Q  153 catcaaccttgaa 165  Q
    | |||||||||||    
T  24098871 cgtcaaccttgaa 24098859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 20939438 - 20939319
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||| ||  |||| |  ||||| |  ||||||||||||||||| | |||||| |||||||||    
T  20939438 cggatgaatactcaagctactcttgtgactttcttctaaaattaacttttttaaatcatcatcatcaggaatgcaaattcttcttctgaatctcaacaca 20939339  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  20939338 ccttgatcatcaaccttgaa 20939319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 46 - 168
Target Start/End: Complemental strand, 20856135 - 20856013
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||| | ||||| ||||||||||| ||||||||  | ||||  || || ||||||||||| |||||||||||||| || |||||||||    
T  20856135 cggatgaatactcaagttgctcttatgactttcttctaaaatcaacttcttcaattcctcattgtcaggaatacaaattctgcctcttaatctcaacaca 20856036  T
Q  146 ccgtgttcatcaaccttgaaatc 168  Q
    || || |||||||||||||||||    
T  20856035 ccttgctcatcaaccttgaaatc 20856013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 59 - 213
Target Start/End: Complemental strand, 23197608 - 23197454
Alignment:
Q  59 aagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaa 158  Q
    ||||||||||||| |||||| || ||||||||  ||||||  ||||| || |||||||| |||||||| |||||||||||||||||||| || |||||||    
T  23197608 aagctactcttgtcactttcctctaaaatcaactttttcaaatcatcattatcaggaatacaaattcttcctctgaacctcaacacaccctgatcatcaa 23197509  T
Q  159 ccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    | || || || | | ||||||||| | ||| | ||| ||| ||||||||||||||    
T  23197508 ctttaaagtcactatcttcagtttcactaccagcaaccatcaaatccacaaactt 23197454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 162
Target Start/End: Complemental strand, 19662505 - 19662396
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||| |||||||||||||||||||| || ||||||||  |||||| ||| || || |||||||| |||||||| |||||||||||||| ||||| || |    
T  19662505 atacttaagctactcttgtgactttcctctaaaatcaactttttcaactcgtcattatcaggaatacaaattcttcctctgaacctcaatacaccctgat 19662406  T
Q  153 catcaacctt 162  Q
    ||||||||||    
T  19662405 catcaacctt 19662396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 20295403 - 20295518
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  20295403 atactcaacctactcttgtgactctcttcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagcacaccctgat 20295502  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  20295503 catcaaccttaaaatc 20295518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 48 - 162
Target Start/End: Original strand, 19855291 - 19855405
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| |||||| ||||||||||||| || ||||||||  |||||| ||| || || |||||||| ||||| || |||||||||||||| |||||    
T  19855291 gatgaatacttaagctattcttgtgactttcctctaaaatcaactttttcaactcgtcattatcaggaatacaaatccttcctctgaacctcaatacacc 19855390  T
Q  148 gtgttcatcaacctt 162  Q
     || |||||||||||    
T  19855391 ctgatcatcaacctt 19855405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 47 - 162
Target Start/End: Complemental strand, 19760247 - 19760132
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttt-tcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    ||||||||||||||||||||  ||||||| ||||| | ||||| ||||| |||||||||||| ||||||||| |||||||| |||| ||| | ||||||     
T  19760247 ggatggatactcaagctacttatgtgactctcttcaagaatca-tctttctcatctcatcgtcgtcaggaatacaaattctacctcggaatcgcaacact 19760149  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || ||||| |||||    
T  19760148 ccctgatcatcgacctt 19760132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 213
Target Start/End: Complemental strand, 20835208 - 20835108
Alignment:
Q  113 ggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaact 212  Q
    |||||||||||||| |||||||||||||||||||| || ||||||||||| ||||| | | | |||||   ||||| | ||| ||||||||| |||||||    
T  20835208 ggaatgcaaattcttcctctgaacctcaacacaccctgatcatcaaccttaaaatcactatcctcagtgccattaccagcaaccattaaatcaacaaact 20835109  T
Q  213 t 213  Q
    |    
T  20835108 t 20835108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 31539365 - 31539250
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || |||| ||||||  | |||| ||| || ||||||||||| |||| ||| ||| ||||||||| |||||| || |    
T  31539365 atactcaacctactcttgtgactctcctccagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctgtgaacctcagcacaccctgat 31539266  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||  ||||||||    
T  31539265 catcaattttgaaatc 31539250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 37678071 - 37678186
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  37678071 atactcaaactactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagtacaccctgat 37678170  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  37678171 catcaactttgaaatc 37678186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 50619619 - 50619509
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||| || ||||| ||||| | ||||| | | ||||||||||| ||||  ||||| |||||||| ||||  ||||||||||||    
T  50619619 cggatgaatactcaagctacttttatgactctcttcaagaatcattttcttcatctcatcattgtatggaatacaaattctacctcgaaacctcaacaca 50619520  T
Q  146 ccgtgttcatc 156  Q
    || || |||||    
T  50619519 ccttgatcatc 50619509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 22110013 - 22110150
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||| ||||  | ||||| ||||| | ||||| | | ||||||||||| | ||| ||||| ||||||||||||| ||| |||||||| || || |    
T  22110013 atactcaagttacttctatgactctcttcaagaatcattttcttcatctcatcatcgtctggaatacaaattctgcctcggaatctcaacactccttggt 22110112  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    |||| | ||| ||||| | | ||||||| |||||||||    
T  22110113 catcgatcttaaaatcactatcttcagtctgattacta 22110150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 22113862 - 22113999
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||| ||||  | ||||| ||||| | ||||| | | ||||||||||| | ||| ||||| ||||||||||||| ||| |||||||| || || |    
T  22113862 atactcaagttacttctatgactctcttcaagaatcattttcttcatctcatcatcgtctggaatacaaattctgcctcggaatctcaacactccttggt 22113961  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    |||| | ||| ||||| | | ||||||| |||||||||    
T  22113962 catcgatcttaaaatcactatcttcagtctgattacta 22113999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 16373513 - 16373680
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| |||| ||||||||||| | ||| ||||| |||||||| ||||  || ||||||||    
T  16373513 cggatgaatactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtctggaatacaaattctacctcgaaatctcaacac 16373611  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    ||| || ||||| ||||| || || |   ||||||| ||||||||| ||| ||  || |||||||||||    
T  16373612 accttgatcatcgaccttaaagtcactgtcttcagtctgattactagcaaccaacaagtccacaaactt 16373680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 19107352 - 19107462
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||| |||| || ||||| | ||||| |||| || ||||| || ||||| ||||| |||||||| |||| ||| ||||||||    
T  19107352 cggatgaatactcaagctactcctgtggctctcttcaagaatca-tcttcttaatctcttcattgtctggaatacaaattcttcctcggaatctcaacac 19107450  T
Q  145 accgtgttcatc 156  Q
    ||| || |||||    
T  19107451 accttgatcatc 19107462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 215
Target Start/End: Original strand, 21025221 - 21025326
Alignment:
Q  110 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaa 209  Q
    |||||||| ||||||| ||||| ||| ||||||||||| || ||||  ||||| || || ||| ||||||| ||||||||| ||| ||  || || ||||    
T  21025221 tcaggaatacaaattcggcctcggaatctcaacacaccatggtcattgaccttaaagtcaccatcttcagtctgattactagcaaccaacaagtctacaa 21025320  T
Q  210 acttga 215  Q
    ||||||    
T  21025321 acttga 21025326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Complemental strand, 20835263 - 20835231
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttc 78  Q
    |||||| ||||||||||||||||||||||||||    
T  20835263 cggatgaatactcaagctactcttgtgactttc 20835231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 64; Significance: 4e-28; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 11363 - 11196
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||| ||||| |||||||||||  ||||||  ||||| || ||||||||||||||||| ||| |||| |||||||||    
T  11363 cggatgaatacttaagctactcttgtggctttcctccaaaatcaactttttcacatcatcattatcaggaatgcaaattcttcctttgaatctcaacaca 11264  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || ||||||||||| || || | | ||||||||| ||||| | ||| ||| ||||| ||||||||    
T  11263 ccttgatcatcaaccttaaagtcactatcttcagtttcattaccagcaaccatcaaatcaacaaactt 11196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 15133 - 14966
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||| ||||| |||||||||||  ||||||  ||||| || ||||||||||||||||| ||| |||| |||||||||    
T  15133 cggatgaatacttaagctactcttgtggctttcctccaaaatcaactttttcacatcatcattatcaggaatgcaaattcttcctttgaatctcaacaca 15034  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || ||||||||||| || || | | ||||||||| ||||| | ||| ||| ||||| ||||||||    
T  15033 ccttgatcatcaaccttaaagtcactatcttcagtttcattaccagcaaccatcaaatcaacaaactt 14966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 20983 - 21152
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  ||||||  ||||| || |||||||| ||||| || ||| ||||| |||| | |    
T  20983 cggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcattatcaggaatacaaatccttcctgtgaacttcaatata 21082  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || |||| ||||||||| || | | ||||| ||| ||||| | ||| ||| ||||| ||||||||||    
T  21083 ccctgatcattaaccttgaagtcactatcttcaatttcattaccagcaaccatcaaatcaacaaacttga 21152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 64; Significance: 4e-28; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 3752 - 3867
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| |||||||||||||||||||| || ||||||||  ||||||  ||||| || ||||||||||||||||| |||||||||||||||||||    
T  3752 ggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaaatcatcattatcaggaatgcaaattcttcctctgaacctcaacacac 3851  T
Q  147 cgtgttcatcaacctt 162  Q
    | || |||||||||||    
T  3852 cctgatcatcaacctt 3867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 165
Target Start/End: Original strand, 20121 - 20239
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||| ||||| ||||    
T  20121 ggatgaatactcaagctactcttgtgactctcttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaatctcaatacac 20220  T
Q  147 cgtgttcatcaaccttgaa 165  Q
    | || |||||||| |||||    
T  20221 cctgatcatcaactttgaa 20239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 63; Significance: 2e-27; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 47 - 213
Target Start/End: Complemental strand, 46704 - 46538
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||||||||||||||||||||||||||| ||||| ||  ||||||  ||||| || |||||||| || ||||| |||||||||||||||||||    
T  46704 ggatgaatactcaagctactcttgtgactttcttctaaaattaactttttcaaatcatcattatcaggaatacagattcttcctctgaacctcaacacac 46605  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    | || ||||||||||| || || | | | |||| || ||||||| ||| ||| ||||| ||||||||    
T  46604 cctgatcatcaaccttaaagtcactatcctcagcttcattactagcaaccatcaaatcaacaaactt 46538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 41632 - 41517
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || ||||||||||| |||| ||| ||||||||||||| |||||| || |    
T  41632 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattgtcaggaatacaaactctacctctgaacctcagcacaccctgat 41533  T
Q  153 catcaaccttgaaatc 168  Q
    ||||||| ||||||||    
T  41532 catcaactttgaaatc 41517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 190
Target Start/End: Original strand, 2921 - 3058
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| |  | |||||| ||||||||||||| ||| |||||||| || || |    
T  2921 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcatcattaggaatacaaattctgcctcagaatctcaacaccccctgat 3020  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    |||| |  || ||||| | | ||||||| |||||||||    
T  3021 catcgattttaaaatcactatcttcagtctgattacta 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 62; Significance: 6e-27; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 149570 - 149739
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| |||| ||||||  ||||||  ||||| || ||||||||||||||| | ||||||||||||||||||    
T  149570 cggatgaatacttaagctactcttgtgactttcctccagaatcaactttttcaaatcatcattatcaggaatgcaaatttttcctctgaacctcaacaca 149669  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    || || ||||||||||| || || |   | ||||||| ||||| | ||| ||| || |||||||||||||    
T  149670 ccctgatcatcaaccttaaagtcactttcctcagtttcattaccagcaaccatcaagtccacaaacttga 149739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 195010 - 194843
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || ||||| ||  ||||||  ||||| |  ||||||||||||||||| |||||||| |||||||||    
T  195010 cggatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaaatcatcatcatcaggaatgcaaattcttcctctgaatctcaacaca 194911  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || |||||||||||||| || | | | |||||   ||||| ||||| ||||||||| ||||||||    
T  194910 ccctgatcatcaaccttgaagtcactatcctcagtgccattaccaacaaccattaaatcaacaaactt 194843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 25832 - 25672
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| ||||||||||| |||||||| ||||  || | |||||| || |  |    
T  25832 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcattgtcaggaatacaaattctccctcgaaaacgcaacactccctaat 25733  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    |||| |  || ||||||| | ||||||| ||||||||| ||||||  || |||||||||||    
T  25732 catcgattttaaaatcgctatcttcagtctgattactagcaatcaacaagtccacaaactt 25672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 24913 - 24879
Alignment:
Q  1 tagatggatctactgcaataccaccactagaaata 35  Q
    |||||||||||||||||||||||| ||||||||||    
T  24913 tagatggatctactgcaataccactactagaaata 24879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 28225 - 28341
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| |||| ||||||  |||||| |||||| || |||||||| |||||||| ||||||||||| ||||||    
T  28225 cggatgaatacttaagctactcttgtgactttcctccagaatcaactttttcaactcatcattatcaggaatacaaattcttcctctgaaccttaacaca 28324  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || |||||||||||    
T  28325 ccctgatcatcaacctt 28341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 249620 - 249732
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||||| ||| ||||||||  |||||| |||||| ||||||||||| |||||||| |||||||||||||  ||||| || |    
T  249620 atactcaaactactcttgtgacttttttctaaaatcaactttttcaactcatcattgtcaggaatacaaattcttcctctgaacctcagaacaccctgat 249719  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  249720 catcaaccttgaa 249732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0309 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 10793 - 10960
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| | ||||||  ||||||||||||| | ||||||  ||||||  ||||| || ||| |||||||||| || ||||||||||||||||||    
T  10793 cggatgaatacttaggctacttctgtgactttcttctagaatcaactttttcaaatcatcattatcaagaatgcaaatccttcctctgaacctcaacaca 10892  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || |||||||||||||| || |||  |||||||| ||| ||| ||| ||||||||| ||||||||    
T  10893 ccctgatcatcaaccttgaagtcaccattttcagtttcattgctagcaaccattaaatcaacaaactt 10960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 14503 - 14340
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||| | ||||||||||| || ||||||||  ||||||  ||||| || |||||||| ||||| || ||||||||||||||||||    
T  14503 cggatgaatacttaagctagttttgtgactttcctctaaaatcaactttttcaaatcatcattatcaggaatacaaatccttcctctgaacctcaacaca 14404  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaa 209  Q
    || || |||||||||||||| || | | ||||||||| ||||||| ||| ||| ||||| ||||    
T  14403 ccctgatcatcaaccttgaagtcactatcttcagtttcattactagcaaccatcaaatcaacaa 14340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 209
Target Start/End: Complemental strand, 22682 - 22519
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||| | ||||||||||| || ||||||||  ||||||  ||||| || |||||||| ||||| || ||||||||||||||||||    
T  22682 cggatgaatacttaagctagttttgtgactttcctctaaaatcaactttttcaaatcatcattatcaggaatacaaatccttcctctgaacctcaacaca 22583  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaa 209  Q
    || || |||||||||||||| || | | ||||||||| ||||||| ||| ||| ||||| ||||    
T  22582 ccctgatcatcaaccttgaagtcactatcttcagtttcattactagcaaccatcaaatcaacaa 22519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 60; Significance: 1e-25; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 323704 - 323823
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||||||||||||||| |||||||| ||  ||||||  ||||| |  ||| ||||||||||||| |||||||| |||||||||    
T  323704 cggatgaatactcaagctactcttgtgactttcctccaaaattaactttttcaaatcatcatcatcaagaatgcaaattcttcctctgaatctcaacaca 323803  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  323804 ccctgatcatcaaccttgaa 323823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 186
Target Start/End: Complemental strand, 202772 - 202634
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| ||||||||  ||||||||||||| ||||||||  |||| | |||||| || |||||||| |||||||| || | ||| |||||||||||    
T  202772 gatgaatacttaagctacttctgtgactttcttctaaaatcaacttttttaactcatcattatcaggaatacaaattctaccgcggaatctcaacacacc 202673  T
Q  148 gtgttcatcaaccttgaaatcgccaccttcagtttgatt 186  Q
     || |||||||||||||| || ||| |||||||||||||    
T  202672 ttgatcatcaaccttgaagtcaccatcttcagtttgatt 202634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 53 - 215
Target Start/End: Complemental strand, 985 - 823
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||| |||||||||||||||||||||| | ||||||  ||| || ||||||  | ||||||||||||||||| |||||||||||||||||||| || |    
T  985 atactctagctactcttgtgactttcttctagaatcaacttttccaactcatcactatcaggaatgcaaattcttcctctgaacctcaacacaccctgat 886  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    ||||||| ||||| ||   | |||| |||| |||| || ||| ||| ||||| ||||||||||    
T  885 catcaactttgaagtcaatatcttccgtttcattattagcaaccatcaaatcaacaaacttga 823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1061 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold1061
Description:

Target: scaffold1061; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 2588 - 2704
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||| | |||||||||||||||||||| || ||||||||| ||||||  ||||| || ||||||||||||||||| ||||||||||| ||||||    
T  2588 cggatgaataattaagctactcttgtgactttcctctaaaatcaattttttcaaatcatcattatcaggaatgcaaattcttcctctgaaccttaacaca 2687  T
Q  146 ccgtgttcatcaacctt 162  Q
    || |  |||||||||||    
T  2688 ccctaatcatcaacctt 2704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 540 - 372
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaa-tcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||| | ||||| ||||||||||| |||| ||||  | ||||  || || ||||||||||| |||||||||||||| || ||||||||    
T  540 cggatgaatactcaagttgctcttatgactttcttctaaaaatcaacttcttcaattcttcattgtcaggaatacaaattctgcctctaaatctcaacac 441  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    ||| |||||||||||||||||||| | |   || | ||||||||||  || ||||||||||||||||||    
T  440 accttgttcatcaaccttgaaatcactattctccgcttgattactagtaaccattaaatccacaaactt 372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 20747 - 20631
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||||||||||||| ||| ||||||||  ||||||  ||||| |  ||||||||||||||||| |||||||| |||||||||    
T  20747 cggatgaatacttaagctactcttgtgacttttttctaaaatcaactttttcaaatcatcatcatcaggaatgcaaattcttcctctgaatctcaacaca 20648  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || |||||||||||    
T  20647 ccatgatcatcaacctt 20631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1646 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold1646
Description:

Target: scaffold1646; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 324 - 443
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || || ||||||||  ||||||| |||||||| ||||| |||    
T  324 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcttcattttcaggaatataaattctacctctgaatctcaataca 423  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  424 ccctggtcatcaaccttgaa 443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 6544 - 6425
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  ||||| |  ||||||||||||||||| ||||| || |||||||||    
T  6544 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaaatcatcatcatcaggaatgcaaattcttcctctaaatctcaacaca 6445  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  6444 ccctgatcatcaaccttgaa 6425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 41917 - 42036
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || ||||||||  |||||| ||| || || | |||||| |||||||| |||||| |||||||||||    
T  41917 cggatgaatacttaagctactcttgtgactttcctctaaaatcaactttttcaactcgtcattattaggaatacaaattcttcctctggacctcaacaca 42016  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  42017 ccctgatcatcaaccttgaa 42036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 20900 - 21019
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||| ||||||||||||||||||||| ||||||||  ||||||  || || |||| |||||| |||||||| |||||||| ||||| |||    
T  20900 cggatgaatactcatgctactcttgtgactttcttctaaaatcaactttttcaattcttcattgtaaggaatacaaattctacctctgaatctcaataca 20999  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  21000 ccctgatcatcaaccttgaa 21019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 45517 - 45636
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || |||||| || | |||||||| | |||||| ||||| |||    
T  45517 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcttcattgtcaagattacaaattctacatctgaatctcaataca 45616  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  45617 ccctgatcatcaaccttgaa 45636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 4758 - 4639
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||| ||||||||||| ||||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| |||    
T  4758 cggatgaatactcaagctactcttatgactttcttctaaaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaataca 4659  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || |  ||||||||||||||    
T  4658 ccctaatcatcaaccttgaa 4639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 48 - 190
Target Start/End: Complemental strand, 51167 - 51025
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| ||| ||||  ||||||||||||| ||||||||  ||||||  |||||  | ||||||||||||||||| ||||||||||||||||||||    
T  51167 gatgaatacttaagttacttctgtgactttcttctaaaatcaactttttcaaatcatcactatcaggaatgcaaattcttcctctgaacctcaacacacc 51068  T
Q  148 gtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
     || |||||||||||||| || | | || |||||| |||||||    
T  51067 ctgatcatcaaccttgaagtcactatctccagtttcattacta 51025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 53 - 147
Target Start/End: Complemental strand, 100848 - 100754
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    ||||| ||||||||||||||||||||||| ||||||||  |||||| |||||| |||| |||||| |||||||| |||||||| |||||||||||    
T  100848 atacttaagctactcttgtgactttcttctaaaatcaactttttcaactcatcattgttaggaatacaaattcttcctctgaatctcaacacacc 100754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 187
Target Start/End: Original strand, 181199 - 181340
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || | ||||||||| ||||||| ||||| |||  ||||||||    
T  181199 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcgtcaggaatacaaattcggcctcggaatttcaacaca 181298  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgatta 187  Q
    || || ||||| ||||| || || ||| ||||||| ||||||    
T  181299 ccatggtcatcgaccttaaagtcaccatcttcagtctgatta 181340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 48 - 213
Target Start/End: Complemental strand, 10112 - 9947
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| ||||||||  ||||||||||||| ||||||||  |||||| |||||| || |||| ||| |||||||| |||| ||| |||||||||||    
T  10112 gatgaatacttaagctacttctgtgactttcttctaaaatcaactttttcaactcatcattatcagaaatacaaattcttcctcggaatctcaacacacc 10013  T
Q  148 gtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
      | |||||||||||||| || | | ||| |||| |||||||| ||| ||  ||||||||||||||    
T  10012 cagatcatcaaccttgaagtcactatctttagttggattactaccaaccaacaaatccacaaactt 9947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 3505 - 3409
Alignment:
Q  119 caaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    |||||||| |||||||||||||||||||| || |||||||||||||  ||  || ||||||||||||||||| ||| ||| ||||||||||||||||    
T  3505 caaattcttcctctgaacctcaacacaccctgatcatcaaccttgatgtcaacatcttcagtttgattactagcaaccatcaaatccacaaacttga 3409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 119 - 215
Target Start/End: Complemental strand, 30518 - 30422
Alignment:
Q  119 caaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    |||||||| |||||||||||||||||||| || |||||||||||||  ||  || ||||||||||||||||| ||| ||| ||||||||||||||||    
T  30518 caaattcttcctctgaacctcaacacaccctgatcatcaaccttgatgtcaacatcttcagtttgattactagcaaccatcaaatccacaaacttga 30422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 162
Target Start/End: Original strand, 13200 - 13316
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || ||||| || ||||| |  ||||| || |||||||| |||||||| ||||||||||||||||||    
T  13200 cggatgaatacttaagctactcttgtgactttcctctaaaattaaccttttgaaatcatcattatcaggaatacaaattcttcctctgaacctcaacaca 13299  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || ||||| |||||    
T  13300 ccctgatcatccacctt 13316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 48512 - 48396
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||||| |||||||| || ||||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| |||    
T  48512 cggatgaatactcaagctactcttatgactttcctctaaaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaataca 48413  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || |||||||||||    
T  48412 ccctgatcatcaacctt 48396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 43790 - 43902
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||| ||  | |||| |||||| ||||||||||| |||||||| |||||||||||||| ||||| || |    
T  43790 atactcaaactactcttgtgactctcttctagaattaacttcttcaactcatcattgtcaggaatacaaattcttcctctgaacctcaaaacaccctgat 43889  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  43890 catcaaccttgaa 43902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 165
Target Start/End: Complemental strand, 12092 - 11973
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| ||     
T  12092 cggatgaatactcaagctactcttgtgactttcatctaaaattaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatact 11993  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  11992 ccctgatcatcaaccttgaa 11973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 46 - 141
Target Start/End: Complemental strand, 5642 - 5547
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaa 141  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||  ||||||  || || ||||||||||| |||||||| |||||||| |||||    
T  5642 cggatgaatactcaagctactcttgtgactttcttctaaaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaa 5547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 47 - 213
Target Start/End: Original strand, 11734 - 11900
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    ||||| ||||| ||||||||||| ||||||||||| || |||||  ||||||  || || ||||||||||| |||||||| ||| |||| ||||| ||||    
T  11734 ggatgaatacttaagctactcttatgactttcttctaagatcaactttttcaattcttcattgtcaggaatacaaattctacctatgaatctcaatacac 11833  T
Q  147 cgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    | || |||||||||||||| || | | | || |||| ||||| | ||| ||||||||| ||||||||    
T  11834 cctgatcatcaaccttgaagtcactatcctctgtttcattaccagcaaccattaaatcaacaaactt 11900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 48 - 213
Target Start/End: Complemental strand, 13603 - 13438
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||| ||||| |||||||||||||||||||| || | ||| ||  ||||||  ||||| |  ||| ||||||||||||| |||||||| |||||||||||    
T  13603 gatgaatacttaagctactcttgtgactttcctctagaattaactttttcaaatcatcatcatcaagaatgcaaattcttcctctgaatctcaacacacc 13504  T
Q  148 gtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
     | ||||||||||||||| || | | | |||||   ||||||| ||| ||||||||| ||||||||    
T  13503 cttttcatcaaccttgaagtcactatcctcagtgccattactagcaaccattaaatcaacaaactt 13438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 857 - 742
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||| ||||||||||| || ||||||||  |||||| ||| || || |||||||| |||||||| |||||||||||||| |||    
T  857 cggatgaatacttaagctacttttgtgactttcctctaaaatcaactttttcaactc-tcattatcaggaatacaaattcttcctctgaacctcaataca 759  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || |||||||||||    
T  758 ccttgatcatcaacctt 742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 213
Target Start/End: Original strand, 13065 - 13225
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||| ||||  | ||||| ||||| | ||||| | | ||||||||||| ||||| ||||| ||||| || ||||  || ||||||||||| || |    
T  13065 atactcaagttacttctatgactctcttcaagaatcattttcttcatctcatcattgtctggaatacaaatcctacctcgaaatctcaacacaccttgat 13164  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    |||| | ||| ||||| |   ||||||| ||||||||| ||| ||  || |||||||||||    
T  13165 catcgatcttaaaatcactgtcttcagtctgattactagcaaccaacaagtccacaaactt 13225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 6213 - 6332
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||||||||||||||| || ||||| ||  ||||||  || || ||||||||||| ||||||||  ||||||| ||||| ||     
T  6213 cggatgaatactcaagctactcttgtgactttcctctaaaattaactttttcaattcttcattgtcaggaatacaaattctatctctgaatctcaatact 6312  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  6313 ccctgatcatcaaccttgaa 6332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 128 - 214
Target Start/End: Complemental strand, 6315 - 6229
Alignment:
Q  128 cctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttg 214  Q
    ||||||||||| |||||||| || |||||||| ||||| || ||| |||||||||||||||||  || |||||||||||||||||||    
T  6315 cctctgaaccttaacacaccttgatcatcaactttgaagtcaccatcttcagtttgattactagtaaccattaaatccacaaacttg 6229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 10763 - 10647
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || ||||| ||  ||||||   |||| |  | ||||||||||||||| ||||||||||||| ||||    
T  10763 cggatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaaaccatcatcattaggaatgcaaattctccctctgaacctcagcaca 10664  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || |||||||||||    
T  10663 ccctgatcatcaacctt 10647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 46 - 162
Target Start/End: Complemental strand, 20977 - 20861
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| |||||||||||||||||||| || ||||| ||  ||||||   |||| |  | ||||||||||||||| ||||||||||||| ||||    
T  20977 cggatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaaaccatcatcattaggaatgcaaattctccctctgaacctcagcaca 20878  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || |||||||||||    
T  20877 ccctgatcatcaacctt 20861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 32618 - 32506
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||||||| |||||||||||||  ||||| || |    
T  32618 atactcaaactactcttgtgactctcttctagaatcaacttcttcaaatcatcattgtcaggaatacaaattcttcctctgaacctcattacaccctgat 32519  T
Q  153 catcaaccttgaa 165  Q
    |||| ||||||||    
T  32518 catctaccttgaa 32506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 81131 - 81019
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||||||  ||||||  || || ||||||||||| |||||||| |||||||| ||||| || || || |    
T  81131 atactcaaactactcttgtgactctcttcaagaatcaactttttcaattcttcattgtcaggaatacaaattctacctctgaatctcaatactccctgat 81032  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  81031 catcaaccttgaa 81019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 3e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 261308 - 261427
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| |||||||||||||||||||||| |||||| ||||| ||  ||||||  || || |||||| |||  |||||||| |||||||| ||||| ||     
T  261308 cggatgaatactcaagctactcttgtgaccttcttctaaaattaactttttcaattcttcattgtcaagaacacaaattctacctctgaatctcaatact 261407  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||||||||||||    
T  261408 ccctgatcatcaaccttgaa 261427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 278129 - 277992
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| ||||||| ||||| ||| ||||||||||| || |    
T  278129 atactcaacctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattcggcctcggaatctcaacacaccatggt 278030  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    |||| ||||| || || ||| ||||||| |||||||||    
T  278029 catcgaccttaaagtcaccatcttcagtctgattacta 277992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1602 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1602
Description:

Target: scaffold1602; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 46 - 156
Target Start/End: Complemental strand, 1373 - 1263
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||| | ||||| ||||| || |||| | | ||||||||||| | ||||||||| |||||||| |||| ||| |||||||||    
T  1373 cggatgaatactcaagctactcctatgactctcttcaaatatcattttcttcatctcatcatcgtcaggaatacaaattctacctcggaatctcaacaca 1274  T
Q  146 ccgtgttcatc 156  Q
    || || |||||    
T  1273 ccttgatcatc 1263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 4652 - 4515
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||  | ||||  ||||| | ||||| | | |||||||| || | |||||||||||||||||  |||| ||| ||||||||||| || |    
T  4652 atactcaagctacttctatgaccctcttcaagaatcattatcttcatctcttcatcgtcaggaatgcaaattcgacctcggaatctcaacacaccatggt 4553  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    |||||||||| || || ||| ||||||| |||||||||    
T  4552 catcaaccttaaagtcaccatcttcagtctgattacta 4515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 46 - 190
Target Start/End: Original strand, 230043 - 230187
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||  | ||||||||||| | |||| ||||| ||||||||||| | ||| |||||  ||||||| |||| ||| ||||||||    
T  230043 cggatgaatactcaagctacttctatgactttcttcaagaatc-atcttcttcatctcatcatcgtctggaatataaattctacctcggaatctcaacac 230141  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    ||| || ||||| | ||| ||||| ||| ||||||| |||||||||    
T  230142 accttgatcatcgatcttaaaatcaccatcttcagtctgattacta 230187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 143
Target Start/End: Complemental strand, 218723 - 218626
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaaca 143  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| || |||||||| ||||||||||||| ||| |||||||    
T  218723 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcattatcaggaatacaaattctgcctcggaatctcaaca 218626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 165
Target Start/End: Complemental strand, 7444 - 7332
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| ||||||||||| |||| ||| |||||||||||||  ||||| || |    
T  7444 atactcaacctactcttgtgactctcttcaagaatcaacttcttcaaatcatcattgtcaggaatacaaactcttcctctgaacctcagaacaccctgat 7345  T
Q  153 catcaaccttgaa 165  Q
    ||| |||||||||    
T  7344 cataaaccttgaa 7332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 25171 - 25079
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacct 138  Q
    |||||| ||||| |||||||||||||||||||| || ||||| ||  ||||||  ||||| || |||||||| |||||||| |||||||||||    
T  25171 cggatgaatacttaagctactcttgtgactttcctctaaaattaactttttcaaatcatcattatcaggaatacaaattcttcctctgaacct 25079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 20401 - 20513
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| || |||||||| |||||||| ||| |||||||||  ||||| || |    
T  20401 atactcaaactactcttgtgactctcttctagaatcaacttcttcaaatcatcattctcaggaatacaaattcttcctatgaacctcagaacaccctgat 20500  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  20501 catcaaccttgaa 20513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 53 - 165
Target Start/End: Original strand, 23221 - 23333
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||||||  | ||||  ||||| || |||||||| |||||||| ||| |||||||||  ||||| || |    
T  23221 atactcaaactactcttgtgactctcttctagaatcaacttcttcaaatcatcattctcaggaatacaaattcttcctatgaacctcagaacaccctgat 23320  T
Q  153 catcaaccttgaa 165  Q
    |||||||||||||    
T  23321 catcaaccttgaa 23333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 110 - 213
Target Start/End: Original strand, 10501 - 10604
Alignment:
Q  110 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaa 209  Q
    ||||| || ||||||||||||| | | ||||||||||| |  |||||||||||||| || ||| ||||||||||||||||| ||| ||  || |||||||    
T  10501 tcagggatacaaattctgcctcggtatctcaacacaccttcatcatcaaccttgaagtcaccatcttcagtttgattactagcaaccaacaagtccacaa 10600  T
Q  210 actt 213  Q
    ||||    
T  10601 actt 10604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 16012 - 15897
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | |||| ||| || || |||||||| |||| ||| ||||||||||||| |||||| || |    
T  16012 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaactcttcattatcaggaatacaaactctacctctgaacctcagcacaccctgat 15913  T
Q  153 catcaaccttgaaatc 168  Q
    |||||||||| |||||    
T  15912 catcaaccttaaaatc 15897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 131
Target Start/End: Complemental strand, 116211 - 116126
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctc 131  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| |||| ||||||||||| ||||||||||| |||||||||||||    
T  116211 cggatgaatactcaagctacttctgtgactctcttcaagaatca-tcttcttcatctcatcattgtcaggaatacaaattctgcctc 116126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 102233 - 102343
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||||||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || | ||||||||| |||||||| |||| ||| |||||||||    
T  102233 cggatggatactcaagctacttctatgactctcttcaagaatcattttcttcatctcctcatcgtcaggaatacaaattctacctcggaatctcaacaca 102332  T
Q  146 ccgtgttcatc 156  Q
    || || |||||    
T  102333 ccttggtcatc 102343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 46 - 190
Target Start/End: Complemental strand, 32059 - 31915
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||||||||||||| ||||  | ||||| ||||| | ||||| |||| ||||||||||| | ||||||||| |||||||| |||| ||| ||||||||    
T  32059 cggatggatactcaagttacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtcaggaatacaaattctacctcggaatctcaacac 31961  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    ||| || ||||| |  || ||||| | | ||||||| |||||||||    
T  31960 accttgatcatcgattttaaaatcactatcttcagtctgattacta 31915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0331 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 17283 - 17116
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||| |||| |||||||| ||||| | ||||| |||| ||||||||||| |  ||| |||| ||||||||||||| ||| | ||||||    
T  17283 cggatgaatactcaagttacttttgtgactctcttcaagaatca-tcttcttcatctcatcatcttcaagaatacaaattctgcctcagaatcgcaacac 17185  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
      | || |||||||||||||| ||   | ||||||| ||||||||| ||| ||  || |||||||||||    
T  17184 ctcctgatcatcaaccttgaagtcattatcttcagtctgattactagcaaccaacaagtccacaaactt 17116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 190
Target Start/End: Complemental strand, 40065 - 39921
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||  ||||| | ||||| ||||||||  ||||||  ||||| || | |||||| |||||||| ||||  || ||||||||     
T  40065 cggatgaatacttaagctacttctgtgaatatcttctaaaatcaactttttcaattcatcattataaggaatacaaattcttcctcgaaatctcaacacg 39966  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    || || |||||||||||||| || | | ||||||| |||||||||    
T  39965 ccttgatcatcaaccttgaagtcactatcttcagtctgattacta 39921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 11503 - 11336
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||||||||||||||||||  ||||||| ||||  | | ||| |||| ||||||||||| | ||| ||||| |||||||| |||| ||| ||||||||    
T  11503 cggatggatactcaagctacttctgtgactctctttaagagtca-tcttcttcatctcatcatcgtctggaatacaaattctacctcagaatctcaacac 11405  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
     || || ||||| || ||||| || | | |||||||  |||||||| ||| ||  ||||||||||||||    
T  11404 tccttgatcatcgactttgaagtcactatcttcagtcggattactagcaaccaacaaatccacaaactt 11336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 46 - 213
Target Start/End: Complemental strand, 17695 - 17528
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||||||||||||||||||  ||||||| ||||  | | ||| |||| ||||||||||| | ||| ||||| |||||||| |||| ||| ||||||||    
T  17695 cggatggatactcaagctacttctgtgactctctttaagagtca-tcttcttcatctcatcatcgtctggaatacaaattctacctcagaatctcaacac 17597  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
     || || ||||| || ||||| || | | |||||||  |||||||| ||| ||  ||||||||||||||    
T  17596 tccttgatcatcgactttgaagtcactatcttcagtcggattactagcaaccaacaaatccacaaactt 17528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 156
Target Start/End: Original strand, 8366 - 8476
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||| ||||||| ||||| | |||| ||||| || ||||| || ||||| ||||| |||||||| |||| ||| ||||||||    
T  8366 cggatgaatactcaagctactcctgtgactctcttcaagaatc-atcttcttaatctcttcattgtctggaatacaaattcttcctcggaatctcaacac 8464  T
Q  145 accgtgttcatc 156  Q
    ||| || |||||    
T  8465 accttgatcatc 8476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0411 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0411
Description:

Target: scaffold0411; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 162
Target Start/End: Complemental strand, 14383 - 14269
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacac 146  Q
    |||| ||||||||||||||  ||||||| ||||| | ||||| |||| ||||||||||| | ||||||||| |||||||||||||  |||| |||||| |    
T  14383 gatgaatactcaagctacttctgtgactctcttcaagaatca-tcttcttcatctcatcatagtcaggaatacaaattctgcctcgaaaccgcaacactc 14285  T
Q  147 cgtgttcatcaacctt 162  Q
    | || ||||| |||||    
T  14284 cctgatcatcgacctt 14269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0359 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0359
Description:

Target: scaffold0359; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 17681 - 17848
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||| ||||||||  | ||||| ||||| | ||||| | | ||||||||||| | ||||||||| ||||||||||||| ||| ||||||||     
T  17681 cggatgaatacttaagctacttctatgactctcttcaagaatcattttcttcatctcatcatcgtcaggaatacaaattctgcctcagaatctcaacact 17780  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
    || || ||||| |  || |||||   | ||||||| ||||||||| ||| ||  || |||||||||||    
T  17781 ccctgatcatcgattttaaaatcattatcttcagtctgattactagcaaccaacaagtccacaaactt 17848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 53 - 168
Target Start/End: Original strand, 27940 - 28055
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| ||||| | ||||||  |  |||  ||||||||||||||||| |||| ||| |||||||| ||||  ||||| |  |    
T  27940 atactcaatctactcttgtgactctcttcaagaatcaacttcctcaattcatcgttgtcaggaatacaaactcttcctctgaatctcagtacaccctaat 28039  T
Q  153 catcaaccttgaaatc 168  Q
    |||||| |||||||||    
T  28040 catcaatcttgaaatc 28055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 6223 - 6322
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||||||||||||||||||  | ||||||||||| | ||||| | | ||||||||||| |||||  |||||||||| || ||||  ||| ||||||||||    
T  6223 gatggatactcaagctacttctatgactttcttcaagaatcattttcttcatctcatcattgtctagaatgcaaatcctacctcgaaacttcaacacacc 6322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 48 - 159
Target Start/End: Original strand, 66407 - 66518
Alignment:
Q  48 gatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacacc 147  Q
    |||||||||||||||||||  | ||||| ||||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| ||| |||||||||||    
T  66407 gatggatactcaagctacttctatgactctcttcaagaatcattttcttcatctctacatcgtcaggaatgcaaatccgacctcggaatctcaacacacc 66506  T
Q  148 gtgttcatcaac 159  Q
    ||| ||||||||    
T  66507 gtgatcatcaac 66518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 190
Target Start/End: Complemental strand, 39119 - 38982
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||  | ||| | ||||| | ||||| | | |||||||| || | ||||||||| |||||||   ||| ||| ||||||||||| || |    
T  39119 atactcaagctacttctatgagtctcttcaagaatcattttcttcatctcttcatcgtcaggaatacaaattcgatctcggaatctcaacacaccatggt 39020  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    |||||| ||| || || ||| ||||||| |||||||||    
T  39019 catcaagcttaaagtcaccatcttcagtctgattacta 38982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 15877 - 15996
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| | | ||||||||||||| ||||||||| |||||| |  |||  || |||||||||    
T  15877 cggatgaatactcaagctacttctgtgactctcttcaagaatcattttcttcatctcatcgtcgtcaggaatacaaattatatctcgaaatctcaacaca 15976  T
Q  146 ccgtgttcatcaaccttgaa 165  Q
    || || ||||| || |||||    
T  15977 ccctgatcatcgactttgaa 15996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 190
Target Start/End: Complemental strand, 112794 - 112650
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| |||| |||||||| || | ||| ||||| |||||||| |||| ||| ||||||||    
T  112794 cggatgaatactcaagctacttctatgactctcttcaagaatca-tcttcttcatctcctcatcgtctggaatacaaattctacctcggaatctcaacac 112696  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    |||  | ||||| |  || ||||| ||| ||||||| |||||||||    
T  112695 acctcgatcatcgattttaaaatcaccatcttcagtatgattacta 112650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 5797 - 5831
Alignment:
Q  1 tagatggatctactgcaataccaccactagaaata 35  Q
    |||||||||||||||||||||||||||||||||||    
T  5797 tagatggatctactgcaataccaccactagaaata 5831  T

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Target: scaffold0270; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 12927 - 12961
Alignment:
Q  1 tagatggatctactgcaataccaccactagaaata 35  Q
    |||||||||||||||||||||||||||||||||||    
T  12927 tagatggatctactgcaataccaccactagaaata 12961  T

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Target: scaffold0083 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 46 - 128
Target Start/End: Complemental strand, 10322 - 10240
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgc 128  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| | | ||||| ||||||| ||||||||| ||||||||||    
T  10322 cggatgtatactcaagctacttctgtgactctcttcaagaatcattttcttcatgtcatcgtcgtcaggaatacaaattctgc 10240  T

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Target: scaffold0676 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0676
Description:

Target: scaffold0676; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 46 - 215
Target Start/End: Original strand, 7014 - 7183
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| |||||||  |||| ||| |||||||||    
T  7014 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattcgacctcggaatctcaacaca 7113  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    ||  | ||||| || || ||||| ||| ||||||||||||| ||| ||| ||  || || ||||||||||    
T  7114 ccaaggtcatcgactttaaaatcaccatcttcagtttgattgctagcaaccaacaagtctacaaacttga 7183  T

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Target: scaffold0647 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 213
Target Start/End: Original strand, 1908 - 2075
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacac 144  Q
    |||||| ||||||||||||||  ||||||| ||||| | ||||| |||| || |||||||| |||||| |||| |||||||||||||  || | ||||||    
T  1908 cggatgaatactcaagctacttctgtgactctcttcgagaatca-tcttctttatctcatcattgtcaagaatacaaattctgcctcgaaatcgcaacac 2006  T
Q  145 accgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaactt 213  Q
     || || |||||||| || || || | | | ||||| ||||| | | |||||| |||||| ||||||||    
T  2007 tccctgatcatcaactttaaagtcactatcctcagtctgatttccaccaatcaataaatctacaaactt 2075  T

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Target: scaffold0017 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 46 - 190
Target Start/End: Complemental strand, 19373 - 19229
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| | ||| | ||||| | | ||||||||  | | ||||||||||||||| |  |||| |||||||||| ||    
T  19373 cggatgaatactcaagctacttatatgactctattcaagaatcattttcttcatctctgcatcgtcaggaatgcaaatccgacctcggaacctcaacgca 19274  T
Q  146 ccgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    || || |||||||| || || || ||| ||||||| |||||||||    
T  19273 ccatggtcatcaactttaaagtcaccatcttcagtctgattacta 19229  T

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Target: scaffold0017; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 50 - 215
Target Start/End: Original strand, 57021 - 57186
Alignment:
Q  50 tggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgt 149  Q
    |||||||||||||||||  | ||||| ||||| | ||||| | | ||||||||  | | |||||||||| |||| |  |||| ||| |||||||||||||    
T  57021 tggatactcaagctacttctatgactctcttcaagaatcattttcttcatctctgcatcgtcaggaatgtaaatccgacctcggaatctcaacacaccgt 57120  T
Q  150 gttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttga 215  Q
    | || || || || || || ||  ||||||| ||||||||| ||| ||  ||||| ||||||||||    
T  57121 gatcgtcgactttaaagtcaccgtcttcagtctgattactagcaaccaacaaatctacaaacttga 57186  T

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Target: scaffold1715 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold1715
Description:

Target: scaffold1715; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 160
Target Start/End: Original strand, 13 - 72
Alignment:
Q  101 tcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaacc 160  Q
    ||||| ||||||||||| |||| ||| ||||||||||||| |||||| || |||||||||    
T  13 tcatcattgtcaggaatacaaactcttcctctgaacctcagcacaccctgatcatcaacc 72  T

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Target: scaffold0081 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 190
Target Start/End: Original strand, 19651 - 19746
Alignment:
Q  95 ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    |||||||| || | ||||||||| |||||||  |||| ||| ||||||||||| || ||||| ||||| || || ||| ||||||| |||||||||    
T  19651 ttcatctcttcatcgtcaggaatacaaattcgacctcggaatctcaacacaccatggtcatcgaccttaaagtcaccatcttcagtctgattacta 19746  T

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Target: scaffold0081; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 190
Target Start/End: Original strand, 35090 - 35170
Alignment:
Q  110 tcaggaatgcaaattctgcctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattacta 190  Q
    |||||||| |||||||  |||| ||| ||||||||||| || ||||| ||||| || || ||| ||||||| |||||||||    
T  35090 tcaggaatacaaattcgacctcggaatctcaacacaccatggtcatcgaccttaaagtcaccatcttcagtctgattacta 35170  T

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Target: scaffold0081; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 158
Target Start/End: Original strand, 50432 - 50544
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    |||||| ||||||||||||||  | ||||| ||||| | ||||| | | ||||||||||| |  || ||||| |||||||| ||||  |||||||| |||    
T  50432 cggatgaatactcaagctacttctatgactctcttcaagaatcattttcttcatctcatcatcttctggaatacaaattctacctcgaaacctcaataca 50531  T
Q  146 ccgtgttcatcaa 158  Q
    || || |||||||    
T  50532 ccttgatcatcaa 50544  T

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Target: scaffold0093 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 53 - 162
Target Start/End: Original strand, 27268 - 27377
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    |||||||| |||||||||||||| || || | ||||||  | ||||  ||||| |  |||||||| |||| ||| ||| ||||||||| |||||| || |    
T  27268 atactcaacctactcttgtgactctcctcaagaatcaacttcttcaaatcatcatgatcaggaatacaaactcttcctttgaacctcagcacaccctgat 27367  T
Q  153 catcaacctt 162  Q
    ||||||||||    
T  27368 catcaacctt 27377  T

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Target: scaffold1710 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1710
Description:

Target: scaffold1710; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 46 - 78
Target Start/End: Original strand, 864 - 896
Alignment:
Q  46 cggatggatactcaagctactcttgtgactttc 78  Q
    |||||| ||||||||||||||||||||||||||    
T  864 cggatgaatactcaagctactcttgtgactttc 896  T

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Target: scaffold0507 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 162
Target Start/End: Original strand, 9971 - 10086
Alignment:
Q  47 ggatggatactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacaca 145  Q
    ||||| || |||||||||||  | ||||| ||||| | ||||| |||| ||||||||||| | |||| |||| |||||||| |||| ||| |||||||||    
T  9971 ggatgaatgctcaagctacttctatgactctcttcaagaatca-tcttcttcatctcatcatcgtcatgaatacaaattcttcctcagaatctcaacaca 10069  T
Q  146 ccgtgttcatcaacctt 162  Q
    || || ||||| |||||    
T  10070 ccttggtcatcgacctt 10086  T

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Target: scaffold0501 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0501
Description:

Target: scaffold0501; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 53 - 189
Target Start/End: Original strand, 3201 - 3337
Alignment:
Q  53 atactcaagctactcttgtgactttcttccaaaatcaatcttttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||||  | ||||| ||||| | ||||| | | |||||||| || |  |||||||| ||||||   |||| ||| ||||||||||| || |    
T  3201 atactcaagctacttctatgactctcttcaagaatcattttcttcatctcttcatcatcaggaatacaaattaaacctcggaatctcaacacaccatggt 3300  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattact 189  Q
    |||| ||||| || || ||| ||||||| ||||||||    
T  3301 catcgaccttaaagtcaccatcttcagtctgattact 3337  T

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Target: scaffold0396 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0396
Description:

Target: scaffold0396; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 189
Target Start/End: Original strand, 5039 - 5174
Alignment:
Q  54 tactcaagctactcttgtgactttcttccaaaatcaatctt-ttcatctcatcgttgtcaggaatgcaaattctgcctctgaacctcaacacaccgtgtt 152  Q
    ||||||||||||| || ||||| ||||| | |||| ||||| ||||||||||| | ||| ||||| |||||||||||||  || | |||||| || || |    
T  5039 tactcaagctacttttatgactctcttcaagaatc-atcttcttcatctcatcatcgtctggaatacaaattctgcctcgaaaacgcaacactccctgat 5137  T
Q  153 catcaaccttgaaatcgccaccttcagtttgattact 189  Q
    |||| ||||| || || | | ||||||| ||||||||    
T  5138 catcgaccttaaagtcactatcttcagtctgattact 5174  T

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Target: scaffold0102 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 40781 - 40873
Alignment:
Q  129 ctctgaacctcaacacaccgtgttcatcaaccttgaaatcgccaccttcagtttgattactaacaatcattaaatccacaaacttgatgtcca 221  Q
    ||||||| ||||||||||| || | |||||||||||| || ||| ||||||||| |||  ||  || ||| ||||| ||||||||||| ||||    
T  40781 ctctgaatctcaacacaccctgataatcaaccttgaagtcaccatcttcagtttcattgttagtaaccatcaaatcaacaaacttgatatcca 40873  T

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