View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6701_low_22 (Length: 223)
Name: NF6701_low_22
Description: NF6701
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6701_low_22 |
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Alignment Details
Target: chr1 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 72 - 210
Target Start/End: Original strand, 52318089 - 52318227
Alignment:
| Q |
72 |
taaattgataatgttttaggtccctttgaaaagttaattagagggtcaaagattagggaattgagtggtcctgagtactcaaggaaggttatggagaact |
171 |
Q |
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| T |
52318089 |
taaattgataatgttttaggtccctttgaaaagttaattagagggtcaaagattagggaattgagtggtcctgagtactcaaggaaggttatggagaact |
52318188 |
T |
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| Q |
172 |
gtgtagcacacttgaaatcagttggaacttatggagatg |
210 |
Q |
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|||| |||||||||||||||||||||||||||||||||| |
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| T |
52318189 |
gtgtggcacacttgaaatcagttggaacttatggagatg |
52318227 |
T |
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