View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6704_low_18 (Length: 234)

Name: NF6704_low_18
Description: NF6704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6704_low_18
NF6704_low_18
[»] chr8 (46 HSPs)
chr8 (14-234)||(8415366-8415586)
chr8 (14-234)||(44430902-44431123)
chr8 (14-234)||(21322684-21322906)
chr8 (14-234)||(21327272-21327494)
chr8 (74-234)||(22177177-22177338)
chr8 (75-234)||(22049793-22049953)
chr8 (14-180)||(34949690-34949860)
chr8 (14-180)||(36601151-36601321)
chr8 (75-234)||(22055311-22055471)
chr8 (14-180)||(44494528-44494698)
chr8 (14-219)||(11773759-11773970)
chr8 (18-139)||(22989093-22989217)
chr8 (97-234)||(21668477-21668613)
chr8 (86-234)||(22385665-22385811)
chr8 (27-180)||(22248555-22248711)
chr8 (127-234)||(21281634-21281741)
chr8 (86-234)||(41009881-41010028)
chr8 (134-234)||(19903366-19903466)
chr8 (14-234)||(6609143-6609367)
chr8 (14-234)||(28852953-28853178)
chr8 (30-218)||(20840368-20840564)
chr8 (28-234)||(11252331-11252535)
chr8 (67-218)||(29644038-29644189)
chr8 (26-171)||(22176390-22176536)
chr8 (136-234)||(23865088-23865186)
chr8 (27-180)||(45135884-45136040)
chr8 (38-234)||(7302042-7302244)
chr8 (144-234)||(14058040-14058130)
chr8 (128-234)||(25409216-25409323)
chr8 (136-234)||(24322063-24322161)
chr8 (14-171)||(22026075-22026237)
chr8 (14-171)||(22064078-22064240)
chr8 (124-234)||(17053230-17053338)
chr8 (136-234)||(23374017-23374115)
chr8 (134-218)||(18681966-18682049)
chr8 (86-218)||(19988634-19988768)
chr8 (134-218)||(36799030-36799113)
chr8 (38-132)||(21300711-21300810)
chr8 (40-218)||(36446198-36446387)
chr8 (14-171)||(5239530-5239690)
chr8 (162-220)||(8596565-8596623)
chr8 (156-234)||(9273608-9273684)
chr8 (96-171)||(30767536-30767613)
chr8 (14-110)||(20784426-20784526)
chr8 (189-234)||(25110564-25110609)
chr8 (191-219)||(33798887-33798915)
[»] scaffold0003 (1 HSPs)
scaffold0003 (14-234)||(136901-137121)
[»] scaffold0109 (1 HSPs)
scaffold0109 (14-234)||(1392-1612)
[»] chr1 (40 HSPs)
chr1 (26-234)||(22448689-22448896)
chr1 (14-218)||(29554885-29555093)
chr1 (14-234)||(20032424-20032650)
chr1 (14-234)||(20824775-20824998)
chr1 (14-234)||(20838594-20838817)
chr1 (15-180)||(11944601-11944769)
chr1 (38-234)||(19960692-19960890)
chr1 (27-234)||(45306305-45306518)
chr1 (15-180)||(43631296-43631464)
chr1 (126-234)||(955468-955576)
chr1 (14-234)||(19664563-19664768)
chr1 (126-234)||(23067127-23067235)
chr1 (132-234)||(3707187-3707290)
chr1 (14-218)||(19852551-19852764)
chr1 (14-214)||(23196026-23196236)
chr1 (14-218)||(19667179-19667392)
chr1 (14-218)||(19858686-19858899)
chr1 (14-75)||(2341609-2341670)
chr1 (110-234)||(19778883-19779005)
chr1 (29-218)||(21663695-21663891)
chr1 (134-234)||(20046316-20046415)
chr1 (134-234)||(20053354-20053453)
chr1 (95-234)||(20852526-20852666)
chr1 (95-234)||(20707195-20707334)
chr1 (95-234)||(21704799-21704939)
chr1 (134-234)||(41110454-41110555)
chr1 (124-234)||(26722732-26722841)
chr1 (139-234)||(20859152-20859247)
chr1 (93-218)||(20942301-20942428)
chr1 (93-202)||(16884003-16884112)
chr1 (153-218)||(16669749-16669813)
chr1 (26-180)||(21541411-21541564)
chr1 (156-234)||(27279868-27279944)
chr1 (40-218)||(21732244-21732431)
chr1 (96-171)||(20639854-20639931)
chr1 (96-171)||(42096489-42096566)
chr1 (191-220)||(3653168-3653197)
chr1 (26-151)||(24109572-24109701)
chr1 (194-234)||(20578647-20578687)
chr1 (194-234)||(20586341-20586381)
[»] scaffold0074 (1 HSPs)
scaffold0074 (14-234)||(16467-16688)
[»] scaffold0235 (2 HSPs)
scaffold0235 (40-234)||(7158-7353)
scaffold0235 (40-234)||(17372-17567)
[»] scaffold0072 (1 HSPs)
scaffold0072 (14-234)||(55440-55663)
[»] scaffold1615 (1 HSPs)
scaffold1615 (38-234)||(850-1047)
[»] chr6 (57 HSPs)
chr6 (14-234)||(14723899-14724116)
chr6 (14-234)||(2707896-2708119)
chr6 (14-234)||(24514262-24514484)
chr6 (38-234)||(8760857-8761059)
chr6 (20-234)||(7428858-7429078)
chr6 (20-175)||(14595157-14595316)
chr6 (38-234)||(8768594-8768796)
chr6 (15-218)||(28707466-28707674)
chr6 (29-232)||(22905862-22906070)
chr6 (29-232)||(22906506-22906714)
chr6 (38-234)||(19301092-19301290)
chr6 (31-234)||(938106-938313)
chr6 (14-219)||(23954832-23955043)
chr6 (40-234)||(19726160-19726359)
chr6 (86-234)||(14383843-14383989)
chr6 (86-234)||(19589003-19589150)
chr6 (132-234)||(1592423-1592526)
chr6 (132-234)||(21717349-21717452)
chr6 (132-234)||(21725185-21725288)
chr6 (86-234)||(14375735-14375881)
chr6 (93-234)||(19439277-19439416)
chr6 (127-234)||(22757908-22758015)
chr6 (132-234)||(5290643-5290746)
chr6 (95-218)||(14616709-14616833)
chr6 (134-234)||(11284283-11284383)
chr6 (92-218)||(19818508-19818638)
chr6 (95-234)||(20011400-20011540)
chr6 (124-234)||(19285778-19285887)
chr6 (134-234)||(18788049-18788149)
chr6 (134-234)||(29615634-29615734)
chr6 (66-234)||(30270680-30270845)
chr6 (136-234)||(9100467-9100565)
chr6 (124-234)||(12166869-12166978)
chr6 (124-234)||(19876961-19877070)
chr6 (124-234)||(19882737-19882846)
chr6 (124-234)||(23837210-23837319)
chr6 (134-234)||(18799029-18799129)
chr6 (95-218)||(20009357-20009481)
chr6 (135-234)||(34641414-34641512)
chr6 (135-234)||(34648088-34648186)
chr6 (124-234)||(19787309-19787418)
chr6 (136-234)||(29096426-29096524)
chr6 (124-220)||(25471145-25471240)
chr6 (28-218)||(17413530-17413727)
chr6 (156-234)||(14032818-14032894)
chr6 (26-147)||(26419264-26419384)
chr6 (134-218)||(31249907-31249990)
chr6 (156-218)||(13940024-13940084)
chr6 (132-218)||(14582299-14582385)
chr6 (164-218)||(25633796-25633850)
chr6 (134-218)||(28360297-28360381)
chr6 (42-117)||(19448837-19448917)
chr6 (26-180)||(21793963-21794116)
chr6 (61-151)||(23235497-23235588)
chr6 (96-171)||(24561796-24561873)
chr6 (164-218)||(25811468-25811522)
chr6 (42-117)||(19467363-19467443)
[»] scaffold0203 (2 HSPs)
scaffold0203 (14-234)||(17524-17748)
scaffold0203 (14-234)||(2768-2992)
[»] scaffold0015 (2 HSPs)
scaffold0015 (14-218)||(172255-172465)
scaffold0015 (193-234)||(60167-60208)
[»] chr4 (41 HSPs)
chr4 (14-234)||(14062439-14062662)
chr4 (14-234)||(41529508-41529731)
chr4 (14-234)||(16220757-16220984)
chr4 (15-180)||(37839495-37839663)
chr4 (26-234)||(14479996-14480205)
chr4 (93-234)||(26078134-26078274)
chr4 (126-234)||(17000593-17000701)
chr4 (43-234)||(23121155-23121351)
chr4 (27-180)||(41939830-41939987)
chr4 (79-234)||(16750467-16750623)
chr4 (15-180)||(42598224-42598392)
chr4 (127-233)||(15406548-15406654)
chr4 (142-234)||(43285320-43285412)
chr4 (14-234)||(55503587-55503811)
chr4 (27-234)||(14697736-14697948)
chr4 (29-218)||(2585610-2585806)
chr4 (27-234)||(4170012-4170223)
chr4 (134-234)||(27904866-27904965)
chr4 (74-234)||(31132197-31132358)
chr4 (134-234)||(8056057-8056158)
chr4 (28-218)||(14556525-14556723)
chr4 (92-218)||(16156237-16156363)
chr4 (130-234)||(14508344-14508447)
chr4 (95-234)||(16148233-16148372)
chr4 (92-218)||(16152091-16152217)
chr4 (132-179)||(23725299-23725346)
chr4 (134-218)||(41800391-41800474)
chr4 (134-218)||(42700880-42700963)
chr4 (134-218)||(51602512-51602595)
chr4 (134-218)||(51608393-51608476)
chr4 (124-234)||(1651479-1651589)
chr4 (61-234)||(11846624-11846796)
chr4 (28-103)||(42219899-42219974)
chr4 (156-234)||(20939935-20940011)
chr4 (41-144)||(40908144-40908248)
chr4 (29-149)||(43286381-43286506)
chr4 (156-234)||(636188-636264)
chr4 (191-220)||(390691-390720)
chr4 (41-122)||(899082-899162)
chr4 (95-179)||(2707380-2707465)
chr4 (30-122)||(11171788-11171883)
[»] scaffold0004 (2 HSPs)
scaffold0004 (18-234)||(326304-326525)
scaffold0004 (18-234)||(320595-320816)
[»] chr5 (48 HSPs)
chr5 (14-234)||(6728683-6728909)
chr5 (15-218)||(19075496-19075704)
chr5 (15-218)||(31253474-31253682)
chr5 (26-175)||(22008377-22008530)
chr5 (27-234)||(29326143-29326356)
chr5 (14-219)||(33474336-33474547)
chr5 (61-234)||(43244187-43244362)
chr5 (133-234)||(24669465-24669567)
chr5 (133-234)||(24739234-24739336)
chr5 (133-234)||(24752003-24752105)
chr5 (132-234)||(22509593-22509695)
chr5 (14-234)||(22759636-22759857)
chr5 (134-234)||(34828640-34828741)
chr5 (95-234)||(22440159-22440298)
chr5 (28-218)||(22233080-22233277)
chr5 (86-175)||(19-108)
chr5 (95-234)||(19235423-19235563)
chr5 (28-175)||(22237689-22237841)
chr5 (74-234)||(43120274-43120435)
chr5 (95-234)||(22466302-22466442)
chr5 (74-234)||(43123807-43123968)
chr5 (136-234)||(22459720-22459818)
chr5 (95-234)||(20771489-20771629)
chr5 (95-234)||(20780264-20780404)
chr5 (29-218)||(21661889-21662088)
chr5 (26-218)||(21676014-21676204)
chr5 (136-234)||(24931324-24931422)
chr5 (124-228)||(23527079-23527182)
chr5 (156-234)||(21678690-21678766)
chr5 (153-218)||(28890835-28890899)
chr5 (153-218)||(28910739-28910803)
chr5 (153-218)||(28926007-28926071)
chr5 (153-218)||(28932430-28932494)
chr5 (153-218)||(28947134-28947198)
chr5 (140-234)||(20831359-20831454)
chr5 (156-234)||(17265219-17265295)
chr5 (156-234)||(17271701-17271777)
chr5 (36-171)||(18409531-18409674)
chr5 (153-218)||(20818767-20818831)
chr5 (153-218)||(20825867-20825931)
chr5 (153-218)||(28897539-28897603)
chr5 (153-218)||(28933934-28933998)
chr5 (191-234)||(22174723-22174766)
chr5 (39-106)||(28260490-28260557)
chr5 (96-171)||(1858092-1858169)
chr5 (34-72)||(23076947-23076985)
chr5 (34-72)||(23082394-23082432)
chr5 (191-220)||(5582790-5582819)
[»] chr7 (53 HSPs)
chr7 (28-234)||(14946264-14946472)
chr7 (28-234)||(15373857-15374065)
chr7 (74-234)||(1612214-1612375)
chr7 (29-234)||(19599386-19599596)
chr7 (20-180)||(10308483-10308647)
chr7 (27-234)||(4992496-4992709)
chr7 (14-234)||(16185122-16185348)
chr7 (15-218)||(11395142-11395350)
chr7 (27-234)||(4988398-4988611)
chr7 (132-234)||(35963163-35963265)
chr7 (20-141)||(38827218-38827343)
chr7 (132-234)||(15338475-15338578)
chr7 (132-234)||(15723640-15723743)
chr7 (86-234)||(11220534-11220680)
chr7 (136-234)||(15711415-15711514)
chr7 (14-218)||(46349196-46349409)
chr7 (139-234)||(6411482-6411577)
chr7 (127-234)||(36306531-36306638)
chr7 (14-234)||(125031-125255)
chr7 (134-234)||(14321028-14321128)
chr7 (74-234)||(21744207-21744368)
chr7 (136-234)||(12711336-12711434)
chr7 (136-234)||(13124406-13124504)
chr7 (29-218)||(3290223-3290419)
chr7 (95-234)||(11395548-11395687)
chr7 (20-218)||(10305875-10306074)
chr7 (136-234)||(13742148-13742246)
chr7 (27-218)||(8775310-8775506)
chr7 (20-218)||(10305454-10305653)
chr7 (95-234)||(20907821-20907962)
chr7 (95-234)||(11384272-11384411)
chr7 (92-234)||(20328682-20328823)
chr7 (136-234)||(2965422-2965520)
chr7 (124-234)||(13005938-13006047)
chr7 (136-234)||(16089639-16089737)
chr7 (95-234)||(16675794-16675934)
chr7 (95-234)||(17650031-17650171)
chr7 (97-234)||(21232470-21232606)
chr7 (134-232)||(18605731-18605829)
chr7 (134-218)||(807437-807520)
chr7 (66-218)||(12592086-12592236)
chr7 (134-218)||(23073867-23073950)
chr7 (92-218)||(15438059-15438187)
chr7 (26-151)||(18959021-18959150)
chr7 (39-180)||(23518283-23518428)
chr7 (96-171)||(4279477-4279554)
chr7 (96-171)||(19615809-19615886)
chr7 (136-218)||(31153985-31154066)
chr7 (191-220)||(11878685-11878714)
chr7 (95-218)||(29182527-29182651)
chr7 (191-220)||(32627015-32627044)
chr7 (26-144)||(16946233-16946351)
chr7 (26-144)||(16952833-16952951)
[»] chr3 (71 HSPs)
chr3 (20-234)||(14648698-14648918)
chr3 (14-234)||(2249465-2249691)
chr3 (15-180)||(45221266-45221434)
chr3 (15-218)||(5840773-5840981)
chr3 (27-234)||(54972332-54972545)
chr3 (27-234)||(54974942-54975155)
chr3 (27-234)||(54977552-54977765)
chr3 (14-219)||(40597-40808)
chr3 (74-234)||(14653140-14653301)
chr3 (75-234)||(13203963-13204127)
chr3 (86-234)||(12961823-12961971)
chr3 (124-234)||(13303684-13303794)
chr3 (124-234)||(13314360-13314470)
chr3 (124-233)||(13325276-13325385)
chr3 (94-218)||(17199483-17199608)
chr3 (134-234)||(22163358-22163459)
chr3 (132-234)||(11851167-11851270)
chr3 (150-234)||(13435318-13435402)
chr3 (132-234)||(20187266-20187369)
chr3 (14-218)||(2270700-2270915)
chr3 (136-234)||(16830427-16830526)
chr3 (136-234)||(16838926-16839025)
chr3 (92-234)||(16802883-16803025)
chr3 (95-234)||(14864366-14864505)
chr3 (134-234)||(17706792-17706892)
chr3 (14-218)||(54900553-54900766)
chr3 (29-171)||(14292244-14292391)
chr3 (136-234)||(17130316-17130414)
chr3 (14-171)||(14542297-14542459)
chr3 (134-234)||(17156704-17156804)
chr3 (134-234)||(24191405-24191505)
chr3 (14-132)||(12201843-12201965)
chr3 (95-234)||(26008742-26008881)
chr3 (136-234)||(19236464-19236562)
chr3 (127-234)||(12254774-12254882)
chr3 (136-234)||(12034808-12034907)
chr3 (26-218)||(24123790-24123980)
chr3 (124-234)||(41456586-41456695)
chr3 (93-218)||(18130264-18130391)
chr3 (134-218)||(4676818-4676901)
chr3 (130-234)||(16383305-16383407)
chr3 (136-234)||(10553520-10553619)
chr3 (28-218)||(10609183-10609375)
chr3 (28-218)||(11965339-11965536)
chr3 (156-218)||(44774877-44774938)
chr3 (156-218)||(44780061-44780122)
chr3 (93-218)||(18136760-18136887)
chr3 (28-69)||(18757636-18757677)
chr3 (134-218)||(17190476-17190560)
chr3 (41-180)||(29550394-29550530)
chr3 (162-220)||(10415984-10416042)
chr3 (162-220)||(10422654-10422712)
chr3 (26-122)||(12418854-12418950)
chr3 (36-122)||(17244236-17244325)
chr3 (40-127)||(11645360-11645452)
chr3 (82-171)||(18719633-18719723)
chr3 (38-132)||(11306307-11306406)
chr3 (38-132)||(12469444-12469543)
chr3 (138-218)||(17495771-17495853)
chr3 (41-120)||(49162689-49162767)
chr3 (96-171)||(8583880-8583957)
chr3 (162-220)||(10390872-10390930)
chr3 (40-117)||(12356551-12356633)
chr3 (40-117)||(12363100-12363182)
chr3 (96-171)||(13969387-13969464)
chr3 (96-171)||(13974866-13974943)
chr3 (96-171)||(14084045-14084122)
chr3 (96-171)||(14089446-14089523)
chr3 (96-171)||(49398986-49399063)
chr3 (191-220)||(10767356-10767385)
chr3 (123-171)||(30126018-30126066)
[»] scaffold0107 (1 HSPs)
scaffold0107 (13-234)||(42050-42273)
[»] scaffold0301 (1 HSPs)
scaffold0301 (18-232)||(13844-14061)
[»] scaffold0098 (1 HSPs)
scaffold0098 (20-234)||(33664-33884)
[»] scaffold0679 (1 HSPs)
scaffold0679 (15-180)||(3597-3765)
[»] scaffold0011 (6 HSPs)
scaffold0011 (14-234)||(258023-258246)
scaffold0011 (95-234)||(151975-152113)
scaffold0011 (14-218)||(251404-251617)
scaffold0011 (93-218)||(197883-198010)
scaffold0011 (14-218)||(146526-146739)
scaffold0011 (96-171)||(175147-175224)
[»] scaffold0114 (2 HSPs)
scaffold0114 (29-234)||(25789-26000)
scaffold0114 (29-234)||(41472-41682)
[»] scaffold0026 (2 HSPs)
scaffold0026 (26-234)||(124901-125112)
scaffold0026 (135-234)||(13313-13412)
[»] scaffold0239 (2 HSPs)
scaffold0239 (74-234)||(8484-8645)
scaffold0239 (74-234)||(14922-15083)
[»] chr2 (47 HSPs)
chr2 (74-234)||(2105167-2105328)
chr2 (14-180)||(20964487-20964657)
chr2 (86-234)||(20723641-20723788)
chr2 (28-218)||(24651864-24652062)
chr2 (14-234)||(24503718-24503942)
chr2 (14-234)||(31754974-31755198)
chr2 (14-234)||(25036527-25036747)
chr2 (28-218)||(23290469-23290665)
chr2 (134-234)||(27211441-27211541)
chr2 (93-227)||(19715240-19715371)
chr2 (93-227)||(19719803-19719934)
chr2 (14-180)||(6031688-6031856)
chr2 (14-234)||(25040634-25040854)
chr2 (134-230)||(26883766-26883863)
chr2 (28-218)||(23297057-23297253)
chr2 (134-234)||(26582315-26582415)
chr2 (21-171)||(22809420-22809571)
chr2 (95-234)||(29280517-29280658)
chr2 (95-234)||(9098-9238)
chr2 (135-234)||(5707450-5707548)
chr2 (93-171)||(19791761-19791838)
chr2 (95-234)||(24942990-24943130)
chr2 (134-218)||(23169746-23169830)
chr2 (134-218)||(23581003-23581087)
chr2 (134-218)||(27785349-27785432)
chr2 (134-218)||(27790570-27790653)
chr2 (134-218)||(12571965-12572048)
chr2 (134-218)||(12578447-12578530)
chr2 (26-218)||(21133808-21133998)
chr2 (15-102)||(23029598-23029688)
chr2 (134-234)||(23877480-23877581)
chr2 (26-180)||(36800017-36800171)
chr2 (61-132)||(22797208-22797279)
chr2 (134-234)||(23102892-23102995)
chr2 (41-218)||(27368063-27368238)
chr2 (26-180)||(43692848-43693001)
chr2 (156-234)||(27296429-27296505)
chr2 (14-117)||(25108020-25108128)
chr2 (15-62)||(8688294-8688340)
chr2 (95-167)||(19650137-19650211)
chr2 (95-171)||(19654925-19655003)
chr2 (61-151)||(28971874-28971965)
chr2 (96-171)||(200155-200232)
chr2 (96-171)||(6744910-6744987)
chr2 (36-131)||(21906780-21906878)
chr2 (191-220)||(4077039-4077068)
chr2 (191-220)||(11360780-11360809)
[»] scaffold0348 (4 HSPs)
scaffold0348 (27-234)||(15889-16100)
scaffold0348 (127-213)||(11028-11113)
scaffold0348 (95-234)||(13483-13624)
scaffold0348 (92-218)||(14027-14157)
[»] scaffold0037 (2 HSPs)
scaffold0037 (15-180)||(37330-37498)
scaffold0037 (41-180)||(102208-102344)
[»] scaffold1684 (1 HSPs)
scaffold1684 (127-233)||(1124-1230)
[»] scaffold0742 (1 HSPs)
scaffold0742 (74-234)||(3250-3410)
[»] scaffold0506 (1 HSPs)
scaffold0506 (86-234)||(8020-8166)
[»] scaffold0071 (1 HSPs)
scaffold0071 (74-234)||(51395-51556)
[»] scaffold0010 (4 HSPs)
scaffold0010 (28-218)||(49627-49825)
scaffold0010 (28-218)||(57160-57358)
scaffold0010 (28-218)||(38033-38231)
scaffold0010 (164-218)||(179550-179604)
[»] scaffold0053 (3 HSPs)
scaffold0053 (94-218)||(63334-63459)
scaffold0053 (94-218)||(64031-64156)
scaffold0053 (95-234)||(80893-81032)
[»] scaffold0097 (1 HSPs)
scaffold0097 (86-234)||(27470-27617)
[»] scaffold1555 (1 HSPs)
scaffold1555 (61-180)||(15-134)
[»] scaffold0326 (2 HSPs)
scaffold0326 (132-234)||(866-969)
scaffold0326 (132-234)||(16686-16789)
[»] scaffold0058 (3 HSPs)
scaffold0058 (127-230)||(17116-17219)
scaffold0058 (14-234)||(33942-34166)
scaffold0058 (127-176)||(23639-23688)
[»] scaffold0002 (1 HSPs)
scaffold0002 (28-218)||(369953-370151)
[»] scaffold0367 (1 HSPs)
scaffold0367 (28-218)||(7719-7917)
[»] scaffold0516 (2 HSPs)
scaffold0516 (14-234)||(8330-8550)
scaffold0516 (136-234)||(80-178)
[»] scaffold0141 (1 HSPs)
scaffold0141 (27-234)||(32176-32388)
[»] scaffold0049 (1 HSPs)
scaffold0049 (27-234)||(82424-82636)
[»] scaffold0065 (1 HSPs)
scaffold0065 (98-218)||(28222-28341)
[»] scaffold0622 (1 HSPs)
scaffold0622 (136-234)||(12-110)
[»] scaffold0512 (1 HSPs)
scaffold0512 (14-234)||(12095-12319)
[»] scaffold0323 (1 HSPs)
scaffold0323 (14-171)||(6782-6942)
[»] scaffold0720 (1 HSPs)
scaffold0720 (134-234)||(4631-4732)
[»] scaffold0605 (1 HSPs)
scaffold0605 (95-234)||(8767-8908)
[»] scaffold0453 (1 HSPs)
scaffold0453 (134-234)||(11832-11933)
[»] scaffold0008 (1 HSPs)
scaffold0008 (92-218)||(29156-29284)
[»] scaffold0001 (4 HSPs)
scaffold0001 (29-215)||(95385-95578)
scaffold0001 (134-234)||(488768-488868)
scaffold0001 (134-234)||(494420-494521)
scaffold0001 (94-234)||(174999-175140)
[»] scaffold1405 (1 HSPs)
scaffold1405 (134-234)||(1747-1847)
[»] scaffold0117 (1 HSPs)
scaffold0117 (134-234)||(10069-10169)
[»] scaffold0377 (1 HSPs)
scaffold0377 (94-218)||(6861-6987)
[»] scaffold0025 (2 HSPs)
scaffold0025 (93-234)||(70703-70840)
scaffold0025 (134-234)||(15890-15990)
[»] scaffold0077 (3 HSPs)
scaffold0077 (95-234)||(5052-5191)
scaffold0077 (93-218)||(18609-18736)
scaffold0077 (93-218)||(24235-24362)
[»] scaffold0811 (1 HSPs)
scaffold0811 (136-234)||(390-488)
[»] scaffold0574 (1 HSPs)
scaffold0574 (14-171)||(6398-6555)
[»] scaffold0076 (3 HSPs)
scaffold0076 (93-230)||(52127-52261)
scaffold0076 (96-171)||(30731-30808)
scaffold0076 (96-171)||(36132-36209)
[»] scaffold1311 (1 HSPs)
scaffold1311 (130-234)||(1955-2058)
[»] scaffold0730 (1 HSPs)
scaffold0730 (66-234)||(4197-4363)
[»] scaffold0154 (1 HSPs)
scaffold0154 (97-234)||(29355-29491)
[»] scaffold0149 (1 HSPs)
scaffold0149 (28-202)||(39223-39403)
[»] scaffold0034 (3 HSPs)
scaffold0034 (134-234)||(71883-71983)
scaffold0034 (40-117)||(7218-7300)
scaffold0034 (92-171)||(18043-18124)
[»] scaffold0220 (1 HSPs)
scaffold0220 (135-233)||(9992-10088)
[»] scaffold0120 (1 HSPs)
scaffold0120 (61-218)||(5600-5760)
[»] scaffold0160 (1 HSPs)
scaffold0160 (82-195)||(7763-7876)
[»] scaffold0113 (1 HSPs)
scaffold0113 (14-218)||(27222-27436)
[»] scaffold0389 (1 HSPs)
scaffold0389 (135-212)||(1334-1411)
[»] scaffold0023 (3 HSPs)
scaffold0023 (38-157)||(1636-1757)
scaffold0023 (95-234)||(131972-132113)
scaffold0023 (62-122)||(20989-21049)
[»] scaffold0006 (1 HSPs)
scaffold0006 (134-234)||(48691-48792)
[»] scaffold0085 (1 HSPs)
scaffold0085 (138-234)||(16823-16919)
[»] scaffold0019 (1 HSPs)
scaffold0019 (134-234)||(49988-50088)
[»] scaffold0343 (1 HSPs)
scaffold0343 (95-218)||(613-737)
[»] scaffold0167 (1 HSPs)
scaffold0167 (29-218)||(6473-6669)
[»] scaffold0029 (2 HSPs)
scaffold0029 (134-218)||(110400-110484)
scaffold0029 (134-218)||(116435-116519)
[»] scaffold0148 (1 HSPs)
scaffold0148 (66-217)||(1-150)
[»] scaffold0706 (1 HSPs)
scaffold0706 (127-234)||(3742-3850)
[»] scaffold0104 (2 HSPs)
scaffold0104 (26-218)||(22589-22779)
scaffold0104 (41-218)||(19769-19944)
[»] scaffold0657 (1 HSPs)
scaffold0657 (134-234)||(359-459)
[»] scaffold0476 (1 HSPs)
scaffold0476 (134-234)||(4733-4833)
[»] scaffold0213 (1 HSPs)
scaffold0213 (135-184)||(6405-6454)
[»] scaffold1299 (1 HSPs)
scaffold1299 (134-234)||(528-628)
[»] scaffold0947 (1 HSPs)
scaffold0947 (40-127)||(357-449)
[»] scaffold0609 (1 HSPs)
scaffold0609 (134-218)||(328-411)
[»] scaffold0298 (3 HSPs)
scaffold0298 (29-131)||(14084-14190)
scaffold0298 (29-131)||(17854-17960)
scaffold0298 (36-131)||(1197-1295)
[»] scaffold0243 (2 HSPs)
scaffold0243 (28-214)||(8477-8670)
scaffold0243 (28-73)||(23117-23161)
[»] scaffold2175 (1 HSPs)
scaffold2175 (40-131)||(185-279)
[»] scaffold0106 (2 HSPs)
scaffold0106 (93-218)||(47202-47329)
scaffold0106 (96-171)||(37915-37992)
[»] scaffold0028 (3 HSPs)
scaffold0028 (93-218)||(64538-64666)
scaffold0028 (96-171)||(47568-47645)
scaffold0028 (96-171)||(52974-53051)
[»] scaffold0610 (1 HSPs)
scaffold0610 (38-129)||(5058-5154)
[»] scaffold0124 (1 HSPs)
scaffold0124 (29-131)||(15331-15437)
[»] scaffold0211 (1 HSPs)
scaffold0211 (156-234)||(29969-30045)
[»] scaffold0039 (1 HSPs)
scaffold0039 (156-234)||(94589-94665)
[»] scaffold0355 (1 HSPs)
scaffold0355 (96-180)||(2028-2113)
[»] scaffold0309 (1 HSPs)
scaffold0309 (95-218)||(20413-20536)
[»] scaffold0020 (1 HSPs)
scaffold0020 (36-117)||(103488-103572)
[»] scaffold0634 (1 HSPs)
scaffold0634 (70-234)||(2146-2309)
[»] scaffold0316 (1 HSPs)
scaffold0316 (61-151)||(56-147)
[»] scaffold0061 (1 HSPs)
scaffold0061 (38-132)||(57768-57867)
[»] scaffold0017 (1 HSPs)
scaffold0017 (38-132)||(140766-140865)
[»] scaffold0708 (1 HSPs)
scaffold0708 (96-171)||(18-95)
[»] scaffold0461 (2 HSPs)
scaffold0461 (36-131)||(1628-1726)
scaffold0461 (36-131)||(8564-8662)
[»] scaffold0249 (1 HSPs)
scaffold0249 (136-218)||(15275-15356)
[»] scaffold1340 (1 HSPs)
scaffold1340 (14-70)||(1918-1975)
[»] scaffold0126 (1 HSPs)
scaffold0126 (191-220)||(30812-30841)
[»] scaffold0060 (1 HSPs)
scaffold0060 (41-122)||(40768-40848)
[»] scaffold2015 (1 HSPs)
scaffold2015 (123-171)||(930-978)
[»] scaffold0108 (1 HSPs)
scaffold0108 (61-117)||(51143-51199)
[»] scaffold0088 (1 HSPs)
scaffold0088 (124-172)||(25856-25904)


Alignment Details
Target: chr8 (Bit Score: 197; Significance: 1e-107; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 8415586 - 8415366
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagcctta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||    
T  8415586 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaactgtttaaacctccataactaaatcttggcataaaagcctta 8415487  T
Q  114 tcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagag 213  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8415486 tcaacataagttcagcaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaacgataaaatcccatcccacgtatcagag 8415387  T
Q  214 ccctaaaaactttgagccacc 234  Q
    ||||| | |||||||||||||    
T  8415386 ccctagacactttgagccacc 8415366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 44430902 - 44431123
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagcctta 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||    
T  44430902 acatccttcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaactgtttaaacctccgtaactaaatcttggcataaaagcctta 44431001  T
Q  114 tcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagag 213  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| ||||||| |||||||||    
T  44431002 tcaacataagttcaacaacaataggactacaacagcaatattcaaaatttgatacataggaaagaaattaaacgatacaatctcatcccatgtatcagag 44431101  T
Q  214 ccc-taaaaactttgagccacc 234  Q
    ||| || | |||||||||||||    
T  44431102 cccatagacactttgagccacc 44431123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 21322906 - 21322684
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||||    |||||||||| ||||||| |||||||| ||||||||||||||||| |    
T  21322906 acatccttcaagatcatcattaattttgcagcgaaatgtttgcatcaaaacaacaacaacaactgtttaaacctccataattaaatcttggcataaaatc 21322807  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    |||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||  | |   || |||||||||||||||||||    
T  21322806 cttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaatttgatacataggaataaaggtga--cattaaatcccatcccacgtatc 21322709  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    ||||||||| | |||||||||||||    
T  21322708 agagccctagacactttgagccacc 21322684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 21327494 - 21327272
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||    |||||||||| ||||||| |||||||| ||||||||||||||||| |    
T  21327494 acatccttcaagatcatcattaattttgcagcggaatgtttgcatcaaaacaacaacaacaactgtttaaacctccataattaaatcttggcataaaatc 21327395  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    |||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||  | |   || |||||||||||||||||||    
T  21327394 cttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaatttgatacataggaataaaggtga--cattaaatcccatcccacgtatc 21327297  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    |||| |||| | |||||||||||||    
T  21327296 agagtcctagacactttgagccacc 21327272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 22177177 - 22177338
Alignment:
Q  74 gtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    |||| |||||||||||  || ||||||||| ||||||||| || |||||  || |||| |||||||||||||| ||||||||||||||||||||||||||    
T  22177177 gttttaaactccataataaattcttggcatgaaagccttaacatcataaaatccaacaccaatagggctacaatagcaatattcaaaatttgatacatag 22177276  T
Q  173 gaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  22177277 gaaagaaattaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 22177338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 22049793 - 22049953
Alignment:
Q  75 tttaaaactccataactaaatcttggcataaaagccttatcaacat-aagttcaacaacaatagggctacaacagcaatattcaaaatttgatacatagg 173  Q
    |||||||||||||||  || ||||||||| ||||||||| || ||  || | ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  22049793 tttaaaactccataataaattcttggcatgaaagccttaacatcaacaaatccaacatcaatagggctacaacagcaataatcaaaatttgatacatagg 22049892  T
Q  174 aaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  22049893 aaagaaattaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 22049953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 34949690 - 34949860
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||||||||||||||    
T  34949690 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaagc 34949789  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    ||||||||||||| ||||||||| |||||| |||  || || ||||||||| |||||||||||||| ||||    
T  34949790 cttatcaacataaattcaacaaccatagggttacgtcaacagtattcaaaaattgatacataggaatgaaa 34949860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 36601151 - 36601321
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| |||||  |||||||||||||| |||||||| ||||||||||||    |||||||||| ||||||| |||||||| ||||||||||||||||| |    
T  36601151 acatccttcaaagtcatcattaattttacagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaaac 36601250  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    ||||||||||||| ||||||||| ||| ||||||  ||||||||||||||| |||||| ||||||| ||||    
T  36601251 cttatcaacataaattcaacaaccatatggctacgtcagcaatattcaaaaattgatatataggaatgaaa 36601321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 75 - 234
Target Start/End: Original strand, 22055311 - 22055471
Alignment:
Q  75 tttaaaactccataactaaatcttggcataaaagccttatcaacat-aagttcaacaacaatagggctacaacagcaatattcaaaatttgatacatagg 173  Q
    |||||||||||||||  || ||||||||| || |||||| || ||| || | ||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  22055311 tttaaaactccataataaattcttggcatgaaggccttaacatcatcaaatccaacatcaatagggctacaacggcaatattcaaaatttgatacatagg 22055410  T
Q  174 aaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||| | |||||||||||||| |||||||||| ||||| | |||||||||||||    
T  22055411 aaagaaattaaacaataaaatcccatccaacgtatcagatccctagacactttgagccacc 22055471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 44494698 - 44494528
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaac---aaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| ||||||||| |||||||||||||| |||||||||||| |||||||   ||| ||||||| |||||||| ||||| |||||||||||||    
T  44494698 acatccttcaaaatcatcattgattttgcagcggaaaatttgcatcaaaacaacaacggcaactgtttaaatctccataattaaatattggcataaaagc 44494599  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    ||||||||||||| ||||||||| ||||||| ||  ||||||||||||||  |||||||||||||| ||||    
T  44494598 cttatcaacataaattcaacaaccatagggccacgtcagcaatattcaaatattgatacataggaatgaaa 44494528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 11773759 - 11773970
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| |||||  |||||||||||||| |||||||| ||||||||||||    ||||| |||| ||||||| |||||||| ||||| ||||||||||| |    
T  11773759 acatccttcaaagtcatcattaattttacagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaattttggcataaaaac 11773858  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgta 207  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||| |||||| ||||||| ||||   |   | |||||||||||||  |||||    
T  11773859 cttatcaacataaattcaacaaccatagggctacgtcagcaatattcaaaaattgatatataggaatgaaaaacaataagaaaatcccatcccgtacgta 11773958  T
Q  208 tcagagccctaa 219  Q
    ||||||||||||    
T  11773959 tcagagccctaa 11773970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 139
Target Start/End: Original strand, 22989093 - 22989217
Alignment:
Q  18 cattcaagatcatcattaattttgcagcggaatatttgcatcaaaca---acaacaaccgtttaaaactccataactaaatcttggcataaaagccttat 114  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||   |||||||| ||||||| |||||||| ||||||||||||||||||||||||    
T  22989093 cattcaaaatcatcattaattttgcagcggaaaatttgcatcaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaagccttat 22989192  T
Q  115 caacataagttcaacaacaataggg 139  Q
    |||||||| ||||||||| ||||||    
T  22989193 caacataaattcaacaaccataggg 22989217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 21668477 - 21668613
Alignment:
Q  97 ttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcc 196  Q
    ||||||||||||||| | ||||| || |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||| | |||||||||    
T  21668477 ttggcataaaagcctaa-caacagaaattcatcaaccatagggctacatcagcaatattcaaaatttgatacataggaaagaagttaagcaataaaatcc 21668575  T
Q  197 catcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||| |||| | |||||||||||||    
T  21668576 catcccacgtatcagagtcctagacactttgagccacc 21668613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 22385665 - 22385811
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat 185  Q
    |||| ||||||||||| ||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||  | |     
T  22385665 ataattaaatcttggcgtaaaagccttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaatttgatacataggaataaaggtga- 22385763  T
Q  186 cgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
      || |||||||||||||||||||||||||||| | |||||||||||||    
T  22385764 -cattaaatcccatcccacgtatcagagccctagacactttgagccacc 22385811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 27 - 180
Target Start/End: Original strand, 22248555 - 22248711
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    |||||||||||||| |||||||| ||||||||||||    ||||| |||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  22248555 tcatcattaattttacagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaaaccttatcaacataa 22248654  T
Q  123 gttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
     |||||||| ||| |||||||  ||||||||||||||| |||||| ||||||| ||||    
T  22248655 attcaacaa-aatggggctacgtcagcaatattcaaaaattgatatataggaatgaaa 22248711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 21281634 - 21281741
Alignment:
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaacttt 226  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||| | ||||||||||||||||||||||||||||||| | |||||    
T  21281634 aacatcaatagggctacaacatcaatattcaaaacttgatacataggaaagaagttaagcaataaaatcccatcccacgtatcagagccctagacacttt 21281733  T
Q  227 gagccacc 234  Q
    ||||||||    
T  21281734 gagccacc 21281741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 41010028 - 41009881
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat 185  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  | |     
T  41010028 ataattaaatcttggcataaaagccttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaataaaggtga- 41009930  T
Q  186 cgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |  |||| ||||||||||||||||||||||| | | |||||||||||||    
T  41009929 cattaaactcccatcccacgtatcagagcccaagacactttgagccacc 41009881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 19903466 - 19903366
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||| ||| | ||||||||||||||||||||||||||||||| | ||||||||||||    
T  19903466 atagggctacaacagcattatccaaaatttgatacataggaatgaaagtaaacaataaaatcccatcccacgtatcagagccctagacactttgagccac 19903367  T
Q  234 c 234  Q
    |    
T  19903366 c 19903366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 6609367 - 6609143
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaag 108  Q
    ||||| |||||| |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||||| |||||| | |    
T  6609367 acatccttcaag-tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatctttggcataga-g 6609270  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgt 206  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||   |   | |||||||||||||  ||||    
T  6609269 ccttatcaacataaattcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgt 6609171  T
Q  207 atcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||||||||    
T  6609170 atcagagccctagacactttgagccacc 6609143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 28852953 - 28853178
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaag 108  Q
    ||||| |||||  |||| ||||| |||||||||||| |||||||||||| ||||||   |||  ||||||| |||||||| |||||||| |||||||| |    
T  28852953 acatccttcaaagtcattattaaatttgcagcggaaaatttgcatcaaaacaacaatagcaatagtttaaatctccataattaaatctttggcataaa-g 28853051  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgt 206  Q
    |||||||||||||| ||||||||| ||||||||||  ||| ||||||||||| |||||||||||||| ||||   |   | |||||| ||||||  ||||    
T  28853052 ccttatcaacataaattcaacaaccatagggctacgtcagtaatattcaaaa-ttgatacataggaatgaaaaacaataagaaaatctcatcccgtacgt 28853150  T
Q  207 atcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||||||||    
T  28853151 atcagagccctagacactttgagccacc 28853178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 30 - 218
Target Start/End: Complemental strand, 20840564 - 20840368
Alignment:
Q  30 tcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    |||| |||||||||||||||||||||||| |||     |||| ||||| ||||||  ||||||||    ||| |||||||||||||| ||||| |||| |    
T  20840564 tcatcaattttgcagcggaatatttgcattaaaagcaacaacgacaacggtttaattctccataaaatcatcctggcataaaagcctcatcaaaataaat 20840465  T
Q  125 tcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
    |||| |||||||||||||||| ||||||| | |||||||||||||||||||| |||| ||| |  |||||||||||| |  ||||||||||||||||    
T  20840464 tcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaagtaagcattaaaatcccatctcgtacgtatcagagcccta 20840368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 234
Target Start/End: Complemental strand, 11252535 - 11252331
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc 126  Q
    ||||||| |||| |||||||||||||  ||||||| |||||||||| ||||||  ||||||||   ||||||||||||||||||| |||||  | | |||    
T  11252535 catcatttatttagcagcggaatattctcatcaaaacaacaacaactgtttaac-ctccataat--aatcttggcataaaagcctcatcaa--ttaattc 11252441  T
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaaaaact 224  Q
    |||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  |||||||||||||||| | |||    
T  11252440 aacaaccatagggctacgtcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtatcagagccctagacact 11252341  T
Q  225 ttgagccacc 234  Q
    ||||||||||    
T  11252340 ttgagccacc 11252331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 67 - 218
Target Start/End: Complemental strand, 29644189 - 29644038
Alignment:
Q  67 aacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgat 166  Q
    |||||| ||| ||| |||||| | ||| |||||||||||||||| | ||||||||| |||||| || ||||||||||| || |||||||||||| |||||    
T  29644189 aacaactgttcaaatctccatgattaattcttggcataaaagccatttcaacataaattcaactaccatagggctacatcaacaatattcaaaaattgat 29644090  T
Q  167 acataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    ||||||||  |||| |||     |||||||||||||||||||||||||||||    
T  29644089 acataggagtgaaagtaacattaaaaatcccatcccacgtatcagagcccta 29644038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 22176536 - 22176390
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| |||| |||||||||||||  ||||||| |||||||||| ||||||| |||||||   |||| |||||||||||||||||||||||||| |    
T  22176536 atcatcatttatttagcagcggaatattctcatcaaaacaacaacaactgtttaaacctccatagtaaaatattggcataaaagccttatcaacataaat 22176437  T
Q  125 tcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
     ||||||  ||||||||||| ||||||   ||||||| |||||||||    
T  22176436 ccaacaaacatagggctacatcagcaagtctcaaaatatgatacata 22176390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 23865088 - 23865186
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||| ||| |||||||| ||||||||||| ||||  || | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  23865088 agggctacaacagcattatccaaaattttatacataggaatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 23865186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 45136040 - 45135884
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||||| |||||| | ||||||||||||||    
T  45136040 tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatctttggcataga-gccttatcaacata 45135942  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    | ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||    
T  45135941 aattcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaa 45135884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 38 - 234
Target Start/End: Complemental strand, 7302244 - 7302042
Alignment:
Q  38 tttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatc-ttggcataaaagccttatcaacataagttcaacaac 132  Q
    |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||| |||||||||| ||||||||||||||| |||| ||||    
T  7302244 tttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatccttggcataaa-gccttatcaacataaattcatcaac 7302146  T
Q  133 aatagggctacaacagcaatattcaaaatttgatacataggaaag-aaattaatcgataaaatcccatccc--acgtatcagagccctaaaaactttgag 229  Q
     ||||||||||  |||||| |||| |||||||||||||||||| | |||  |||    |||||||||||||  |||||||||||||||| | ||||||||    
T  7302145 catagggctacgtcagcaacattc-aaatttgatacataggaatgaaaaacaataagaaaaatcccatcccgtacgtatcagagccctagacactttgag 7302047  T
Q  230 ccacc 234  Q
    |||||    
T  7302046 ccacc 7302042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 144 - 234
Target Start/End: Complemental strand, 14058130 - 14058040
Alignment:
Q  144 aacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||| |||||||||||||||||||||||| |||||| |||| | |||||||| |||||||||||||||||| ||| | |||||||||||||    
T  14058130 aacatcaatattcaaaatttgatacatagaaaagaagttaagcaataaaatctcatcccacgtatcagagcactagacactttgagccacc 14058040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 234
Target Start/End: Original strand, 25409216 - 25409323
Alignment:
Q  128 acaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa-ttaatcgataaaatcccatcccacgtatcagagccctaaaaacttt 226  Q
    ||||| ||| ||||||||||||| ||| |||||||||||||||||||| ||||   || | |||||||| |||||| ||||||||||||||| | |||||    
T  25409216 acaaccatatggctacaacagcattatccaaaatttgatacataggaatgaaagaaaaacaataaaatctcatccctcgtatcagagccctagacacttt 25409315  T
Q  227 gagccacc 234  Q
    ||||||||    
T  25409316 gagccacc 25409323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 24322161 - 24322063
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||| | || | ||||||||||||||||| ||| ||||||||| | ||| |||||||||    
T  24322161 agggctacatcagcaatatttcaaaattgatacataggaaagaattcaaacaataaaatcccatcccacatattagagccctagacactgtgagccacc 24322063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 22026237 - 22026075
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| || |||||||| | |||||| |||||||  |||||||    ||||||||||  |||||| ||||||||  || |||||||||||||||    
T  22026237 acatccttcaaaattatcattaaatctgcagcagaatattctcatcaaaacaacaacaacaactatttaaacctccataataaattcttggcataaaagc 22026138  T
Q  110 cttatcaacat-aagttcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||| |||||| || | ||| ||||| ||||||||| |||||| | ||||||| |||||||||    
T  22026137 cttaacaacataaaatccaataacaaaagggctacatcagcaacaatcaaaatatgatacata 22026075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 22064240 - 22064078
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| || |||||||| | ||||||||||||||  |||||||    |||||||||| ||||||| ||||||||  || | |||||||||||||    
T  22064240 acatccttcaaaattatcattaaatctgcagcggaatattctcatcaaaacaacaacaacaactgtttaaacctccataataaatttttggcataaaagc 22064141  T
Q  110 cttatcaacat-aagttcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
    ||||  ||||| || | ||| ||||| ||||||||| |||||| | ||||||| |||||||||    
T  22064140 cttaaaaacataaaatccaataacaaaagggctacatcagcaacaatcaaaatatgatacata 22064078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 17053230 - 17053338
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| || ||  ||||||||||||||||| || ||||  || | |||||||| |||||||||||||||||||||| | ||    
T  17053230 ttcatcaaccatagggctacaacaacattaaccaaaatttgatacatag-aatgaaagaaa-caataaaatctcatcccacgtatcagagccctagacac 17053327  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  17053328 tttgagccacc 17053338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 23374017 - 23374115
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| |||||| |||  ||| |||||||||||||||||| | || | ||||||||||||||||||||| ||||||||  | ||| |||||||||    
T  23374017 agggctacatcagcaaaatttcaaaattgatacataggaaagaattcaagcaataaaatcccatcccacgtattagagccctttatactgtgagccacc 23374115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 18682049 - 18681966
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | || ||||||||||||||||||||||||||||    
T  18682049 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaatgaaatcccatcccacgtatcagagcccta 18681966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 218
Target Start/End: Complemental strand, 19988768 - 19988634
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaa 184  Q
    |||| ||| ||||||||||||||||| ||||| | || ||||| |||||||||||||||| || ||   | |||||||||||||||||||| |||| |||    
T  19988768 ataaataattcttggcataaaagcctcatcaa-agaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaataa 19988670  T
Q  185 tcgataaaatcccatc--ccacgtatcagagcccta 218  Q
     | |||||||||||||    ||||||||||||||||    
T  19988669 gcaataaaatcccatcatgtacgtatcagagcccta 19988634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 36799030 - 36799113
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | || ||||||||||||||||||||||||||||    
T  36799030 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaatgaaatcccatcccacgtatcagagcccta 36799113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 21300810 - 21300711
Alignment:
Q  38 tttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaac 132  Q
    ||||||||||||||||||||| |     |||||||||||| ||||||| | ||||||   ||||||||||||||||||| ||||| |||| |||||||||    
T  21300810 tttgcagcggaatatttgcattaaaagcaacaacaacaactgtttaaatccccataaaataatcttggcataaaagcctcatcaagataaattcaacaac 21300711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 218
Target Start/End: Complemental strand, 36446387 - 36446198
Alignment:
Q  40 tgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaa 134  Q
    |||||||||||||||||||||||     |||||||||| ||||||  ||||||||   ||||||||||||||| ||| ||||| |||||||||  | |||    
T  36446387 tgcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaagtaatcttggcataaaaacctcatcaaaataagttcataatcaa 36446288  T
Q  135 ----tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
         ||||||||| || ||   | ||||| |||||||||||||| |||| ||| | || ||||| ||||||  ||||||||||||||||    
T  36446287 atacaagggctacatcatcatgttccaaaaattgatacataggaatgaaaataagcaattaaatcacatcccgtacgtatcagagcccta 36446198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 5239530 - 5239690
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| | |||||||| ||||||||||||||||||||||||     |||||||| ||| ||||||  ||||||||  | |||||||||| ||||    
T  5239530 acatccttcaaaaacatcatta-ttttgcagcggaatatttgcatcaaaagcaacaacaataacagtttaattctccataaaaatatcttggcat-aaag 5239627  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
    ||||| |||||||| | |||| |  | ||||||||| || |||   ||||||| |||||||||    
T  5239628 ccttaacaacataaatccaaccaacacagggctacatcaacaagtctcaaaatatgatacata 5239690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 8596623 - 8596565
Alignment:
Q  162 ttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaa 220  Q
    |||||||||||||||||| | ||   |||||| ||||||||||||||||||||||||||    
T  8596623 ttgatacataggaaagaattcaaataataaaaccccatcccacgtatcagagccctaaa 8596565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 9273684 - 9273608
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||| |||||||||||| | |||||||| | ||||| |||||||||||||||||||| |||| | |||||||||||||    
T  9273684 caaaaattgatacataggta-gaaattaaactataaa-tcccatcccacgtatcagagtcctagacactttgagccacc 9273608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 30767613 - 30767536
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  30767613 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacatcaagtttcaaaatatgatacata 30767536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 20784526 - 20784426
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| | |||||||||||| ||| ||||||||||||||||||     |||||||||| ||||||  ||||||||   ||| ||||||||||||    
T  20784526 acatccttcaaaaacatcattaattt-gcatcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatattggcataaaag 20784428  T
Q  109 cc 110  Q
    ||    
T  20784427 cc 20784426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 25110564 - 25110609
Alignment:
Q  189 taaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||| |||||||||||||| | || ||||||||||    
T  25110564 taaaatcccatcccatgtatcagagccctagacacattgagccacc 25110609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 191 - 219
Target Start/End: Complemental strand, 33798915 - 33798887
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaa 219  Q
    |||||||||||||||||||||||||||||    
T  33798915 aaatcccatcccacgtatcagagccctaa 33798887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 185; Significance: 1e-100; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 136901 - 137121
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagcctta 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| | ||||||||||||||||||||||||||||||    
T  136901 acatccttcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaaatgtttaaaccaccataactaaatcttggcataaaagcctta 137000  T
Q  114 tcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagag 213  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  137001 tcaacataagttcaacaacaataggactacaacagcaatattcaaaatttgatacataggaaagaaattaaacgataaaatcccatcccacgtatcagag 137100  T
Q  214 ccctaaaaactttgagccacc 234  Q
    ||||| | |||||||||||||    
T  137101 ccctagacactttgagccacc 137121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 177; Significance: 1e-95; HSPs: 1)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 1392 - 1612
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagcctta 113  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||| ||||||||||||    
T  1392 acatccttcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaactatttaaacctccataactaaatcttggaataaaagcctta 1491  T
Q  114 tcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagag 213  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||    
T  1492 tcaacataagttcaacaacaatagggttacaacaacaatattcaaaatttgatacataggaaagaaattaaacgataaaatctcatcccacgtatcagag 1591  T
Q  214 ccctaaaaactttgagccacc 234  Q
    ||||| | |||||||||||||    
T  1592 ccctagacactttgagccacc 1612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 2e-76; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 26 - 234
Target Start/End: Complemental strand, 22448896 - 22448689
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagtt 125  Q
    ||||||||||| | ||||||||||||||| ||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  22448896 atcatcattaaatctgcagcggaatattttcatcaaacaacaacaactgtttaaacctccataactaaatcttggcatagaagccttatcaacataagtt 22448797  T
Q  126 caacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactt 225  Q
    ||| ||||| |||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||||||| | ||||    
T  22448796 caataacaaaagggctacaacgacaatattcaaaatttgatacatagg-aagaaattaaacgataaaatctcatcccacgtatcagagccctagacactt 22448698  T
Q  226 tgagccacc 234  Q
    |||||||||    
T  22448697 tgagccacc 22448689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 29555093 - 29554885
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||| ||||||||||||||    |||||||||| ||||||| |||||||| |||||||| ||||||||||    
T  29555093 acatccttcaaaatcatcattaattttgcagcggtatatttgcatcaaaacaacaacaacaactgtttaaacctccataattaaatctttgcataaaagc 29554994  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||| |||||||||||||||||||| |||| ||| |  |||||||||||||||||||||    
T  29554993 cttatcaacataaattcaacaacaatatggctacatcagcaatatccaaaatttgatacataggaatgaaagtaagcattaaaatcccatcccacgtatc 29554894  T
Q  210 agagcccta 218  Q
    |||||||||    
T  29554893 agagcccta 29554885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 20032650 - 20032424
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||||||||  |||||| |||||||| |||||||||||||||||||    
T  20032650 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaacaatttaaatctccataattaaatcttggcataaaagc 20032551  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgta 207  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||| ||||||  |||||    
T  20032550 cttatcaacataaattcaacaaccatagggctacgtcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatctcatcccgtacgta 20032451  T
Q  208 tcagagccctaaaaactttgagccacc 234  Q
    ||||||||||| | |||||||||||||    
T  20032450 tcagagccctagacactttgagccacc 20032424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 20824998 - 20824775
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| ||||||||||||||||| |||||| ||||||||||||    ||||| ||||  |||||| |||||||| |||||||| |||| |||||    
T  20824998 acatccttcaaaatcatcattaattttgcggcggaaaatttgcatcaaaacaacaacagcaactttttaaatctccataattaaatcttagcatcaaagc 20824899  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
     |||||||||||| ||||||||| ||||| ||||| ||||||||||||||| |||||||||||||| |||  ||| |  |||||||||||||||||||||    
T  20824898 attatcaacataaattcaacaaccataggtctacatcagcaatattcaaaaattgatacataggaatgaaggtaa-cattaaaatcccatcccacgtatc 20824800  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    ||||| ||| |||||||||||||||    
T  20824799 agagcactagaaactttgagccacc 20824775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 20838817 - 20838594
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| ||||  |||||| |||||||| |||||||||| || |||||    
T  20838817 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacagcaactttttaaatctccataattaaatcttgggatcaaagc 20838718  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    ||||||||||||| ||||||||| ||||||||||| ||| ||||||||||| |||||||||||||| |||  ||| |  ||||||   ||||||||||||    
T  20838717 cttatcaacataaattcaacaaccatagggctacatcagaaatattcaaaaattgatacataggaatgaaggtaa-cattaaaataaaatcccacgtatc 20838619  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    ||||||||| | |||||||||||||    
T  20838618 agagccctagacactttgagccacc 20838594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 11944601 - 11944769
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| ||||  |||||| |||||||| ||||||||||||||||||||    
T  11944601 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 11944699  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  11944700 ttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaa 11944769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 38 - 234
Target Start/End: Original strand, 19960692 - 19960890
Alignment:
Q  38 tttgcagcggaata-tttgcatcaaacaacaa-caaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaat 135  Q
    |||||||||||||| |||||||||||  |||| |||| ||| ||| |||||| | |||||||||||||||||||| | ||||||||| |||||  || ||    
T  19960692 tttgcagcggaataatttgcatcaaatgacaaacaactgttcaaatctccatgaataaatcttggcataaaagccatttcaacataaattcaatcaccat 19960791  T
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||||||||||||||| |||||||||||||||||| | || | |||||||| |||| ||||||||||||||||| | |||||||||||||    
T  19960792 agggctacatcagcaatattcaaaaattgatacataggaaagaattcaagcaataaaatctcatcacacgtatcagagccctagacactttgagccacc 19960890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 45306305 - 45306518
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||||||||| |||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  45306305 tcatcattaaatttgcagcggaaaatttgcatcaaaacaacaacagcaacagtttaaatctccataattaaatctttggcataaaagccttatcaacata 45306404  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaa 219  Q
    | ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||||||||||||     
T  45306405 aattcaacaaccatagggctacgtcagcaatattcaaaa-ttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtatcagagccctag 45306503  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  45306504 acactttgagccacc 45306518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 43631464 - 43631296
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| ||||  |||||| || | ||| ||||||||||||||||||||    
T  43631464 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatcttcgtaattaaatcttggcataaaagcc 43631366  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  43631365 ttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaa 43631296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 955576 - 955468
Alignment:
Q  126 caacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactt 225  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | ||||    
T  955576 caacatcaatagggctacaacaacaatattcaaaatttgatacataggaaagaaattaagcgataaaatctcatcccacgtatcagagccctagacactt 955477  T
Q  226 tgagccacc 234  Q
    |||||||||    
T  955476 tgagccacc 955468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 19664768 - 19664563
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaa-tatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagcct 111  Q
    ||||| ||||| |||||||||||||||||||||||| | ||||||||||| ||||| |||||||||||| |||||||| |||||||||||||||||||||    
T  19664768 acatccttcaaaatcatcattaattttgcagcggaaatttttgcatcaaaacaacatcaaccgtttaaatctccataattaaatcttggcataaaagcct 19664669  T
Q  112 tatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcag 211  Q
    |                 ||||| ||||||||| |||||||||||||||||||||||||||||| ||||  || |  ||||||| |||||||||||||||    
T  19664668 t-----------------aacaacagggctacatcagcaatattcaaaatttgatacataggaatgaaagaaagcattaaaatctcatcccacgtatcag 19664586  T
Q  212 agccctaaaaactttgagccacc 234  Q
    ||||||| | |||||||||||||    
T  19664585 agccctagacactttgagccacc 19664563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 23067235 - 23067127
Alignment:
Q  126 caacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactt 225  Q
    ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||| |||||||| ||||||||||||| | ||||    
T  23067235 caacatcaaaagggctacaacagcaatattcaaaatttgatacataggaaagaaattaagtgataaaatctcatcccacatatcagagccctagacactt 23067136  T
Q  226 tgagccacc 234  Q
    |||||||||    
T  23067135 tgagccacc 23067127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 3707290 - 3707187
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatc-gataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |  |||||||| |||||||||||||||||||||| | |||||||||    
T  3707290 caatagggctacaacaacaatattcaaaatttgatacataggaaagaaattaaacaaataaaatctcatcccacgtatcagagccctagacactttgagc 3707191  T
Q  231 cacc 234  Q
    ||||    
T  3707190 cacc 3707187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 19852551 - 19852764
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||     |||||| ||||| ||||||  |||||||| ||||||| |||||||||     
T  19852551 acatccttcaaaatcatcattaattt-gcagcggaatatttgcatcaaaagcaacaacgacaactgtttaattctccataaataaatctcggcataaaaa 19852649  T
Q  109 ccttatcaacataagttcaacaa-caat--agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--a 203  Q
    ||| |||||||||| |||||||| ||||  ||||||||| ||  ||  |||||||||||||||||||||| |||| ||| |  | ||||||||||||  |    
T  19852650 cctcatcaacataaattcaacaaccaataaagggctacatcattaagtttcaaaatttgatacataggaatgaaaataagcagttaaatcccatcccgta 19852749  T
Q  204 cgtatcagagcccta 218  Q
    |||||||||||||||    
T  19852750 cgtatcagagcccta 19852764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 214
Target Start/End: Complemental strand, 23196236 - 23196026
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatc-----aaacaacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||      |||||| ||||| ||||||  |||||||| |||||||||||||||||     
T  23196236 acatccttcaaaatcatcattaattttgcagcggaatatttgcatcgagaacaacaacgacaactgtttaattctccataaataaatcttggcataaaaa 23196137  T
Q  109 ccttatcaacataagttcaacaa-caat--agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--a 203  Q
    ||| |||||||||| |||||||| ||||  ||||||||| ||  ||  | |||||||||||||||||||| |||| ||| |  | ||||||||||||  |    
T  23196136 cctcatcaacataaattcaacaaccaataaagggctacatcattaagttccaaaatttgatacataggaatgaaaataagcagttaaatcccatcccgta 23196037  T
Q  204 cgtatcagagc 214  Q
    |||||||||||    
T  23196036 cgtatcagagc 23196026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 19667392 - 19667179
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||||     |||| |||||| |||||  |||||||| ||||||||||||||||||    
T  19667392 acatccttcaaaatcatcattaattt-gcagcggaatatttgcatcaaaagcaacaacgacaaccatttaattctccataaataaatcttggcataaaag 19667294  T
Q  109 ccttatcaacataagttcaacaa-caat--agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--a 203  Q
    ||| |||||||||| |||||||| ||||  ||||||||| ||  ||  | |||||||||||||||||||| |||| ||| |  | |||||| |||||  |    
T  19667293 cctcatcaacataaattcaacaaccaataaagggctacatcattaagttccaaaatttgatacataggaatgaaaataagcagttaaatcctatcccgta 19667194  T
Q  204 cgtatcagagcccta 218  Q
    ||||||||| |||||    
T  19667193 cgtatcagatcccta 19667179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 19858686 - 19858899
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||||     |||| ||||| ||||||  |||||||| ||||| |||||||||||     
T  19858686 acatccttcaaaatcatcattaattt-gcagcggaatatttgcatcaaaagcaacaacgacaactgtttaattctccataaataaattttggcataaaaa 19858784  T
Q  109 ccttatcaacataagttcaacaa-caat--agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--a 203  Q
    ||| |||||||||| |||||||| ||||  ||||||||| ||  ||  | |||||||||||||||||||| |||| ||| |  | ||||||||||||  |    
T  19858785 cctcatcaacataaattcaacaaccaataaagggctacatcattaagttccaaaatttgatacataggaatgaaaataagcagttaaatcccatcccgta 19858884  T
Q  204 cgtatcagagcccta 218  Q
    |||||||||||||||    
T  19858885 cgtatcagagcccta 19858899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 2341670 - 2341609
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaaccgt 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2341670 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaaccgt 2341609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 110 - 234
Target Start/End: Complemental strand, 19779005 - 19778883
Alignment:
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    |||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||  | |   || |||||||||||||||||||    
T  19779005 cttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaatttgatacataggaataaaggtga--cattaaatcccatcccacgtatc 19778908  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    ||||||||| | |||||||||||||    
T  19778907 agagccctagacactttgagccacc 19778883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 218
Target Start/End: Original strand, 21663695 - 21663891
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag 123  Q
    ||||||||||| ||||||||||||||||||||     |||||||||||| ||||||  |||||||| |||||||||||||||||| || | ||||||||     
T  21663695 atcattaattt-gcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataa-taaatcttggcataaaagactcaacaacataaa 21663792  T
Q  124 ttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
    ||||| |||  || |||||||||||| |||  | |||||||||||||||||||| |||| ||| |  | ||||| ||||||  ||||||||||||||||    
T  21663793 ttcaaaaactaaaaagggctacaacatcaagttccaaaatttgatacataggaatgaaaataagcagttaaatctcatcccgtacgtatcagagcccta 21663891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 20046415 - 20046316
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    |||||||||||||| || ||  ||||||||||||||||| || |||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||    
T  20046415 atagggctacaacaacattaaccaaaatttgatacatag-aatgaaattaaacaataaaatcccatcccacgtatcagagccctagacactttgagccac 20046317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 20053453 - 20053354
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    |||||||||||||| || ||  ||||||||||||||||| || |||||||| | ||||||||||||||||||||||||||||||| | ||||||||||||    
T  20053453 atagggctacaacaacattaaccaaaatttgatacatag-aatgaaattaaacaataaaatcccatcccacgtatcagagccctagacactttgagccac 20053355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 20852666 - 20852526
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||||| |||| | |||||||||  |||||  || | ||||||||| ||||||||||  ||| |||||||||||||||||| | || | ||||||    
T  20852666 tcttggcataagagccatttcaacataaaattcaatcaccaaagggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaaa 20852567  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | ||| |||||||||    
T  20852566 tcccatcccacgtatcagagccctagacactgtgagccacc 20852526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 20707334 - 20707195
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||||||||||   |||||||||  |||||  |||| ||||||||| || |||||||  ||| |||||||||||||||||| | || | ||||||    
T  20707334 tcttggcataaaagccaattcaacataaaattcaatcacaa-agggctacatcaacaatatttcaaaattgatacataggaaagaattcaagcaataaaa 20707236  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | ||| |||||||||    
T  20707235 tcccatcccacgtatcagagccctagacactgtgagccacc 20707195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 21704799 - 21704939
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    |||||||||||||||| | |||||||||  |||||   | | ||||||||| ||||||||||  ||| |||||||||||||||||| | || | ||||||    
T  21704799 tcttggcataaaagccatttcaacataaaattcaatcgccaaagggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaaa 21704898  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    || |||||||||||||||||||||| | ||| |||||||||    
T  21704899 tctcatcccacgtatcagagccctagacactgtgagccacc 21704939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 41110454 - 41110555
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgat-aaaatcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||  || | || ||||| ||||||||||||||||||||||| | ||||| |||||    
T  41110454 atagggctacaacagcattatccaaaatttgatacataggaatgaaagaaaacaataaaaattccatcccacgtatcagagccctagacacttttagcca 41110553  T
Q  233 cc 234  Q
    ||    
T  41110554 cc 41110555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 26722841 - 26722732
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| || ||  ||||||||||||||||| || ||||  || | |||||||| |||||||||||||||||||||| | ||    
T  26722841 ttcatcaaccatagggctacaacaacattaaccaaaatttgatacatag-aatgaaagaaaacaataaaatctcatcccacgtatcagagccctagacac 26722743  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  26722742 tttgagccacc 26722732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 139 - 234
Target Start/End: Complemental strand, 20859247 - 20859152
Alignment:
Q  139 gctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||| ||||||||||  ||| |||||||||||||||||| | || | |||||| |||||| ||||||||||||||||| | ||| |||||||||    
T  20859247 gctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaaaccccatctcacgtatcagagccctagacactgtgagccacc 20859152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 20942428 - 20942301
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    ||||||||||||||||||  ||||| | || ||||| |||||||||||||||| || ||   | |||||||||||||||||||| |||| ||| | ||||    
T  20942428 aatcttggcataaaagccgcatcaa-agaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaataagcaataa 20942330  T
Q  192 aatcccatccc--acgtatcagagcccta 218  Q
    |||| ||||||  ||||||||||||||||    
T  20942329 aatctcatcccgtacgtatcagagcccta 20942301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 93 - 202
Target Start/End: Complemental strand, 16884112 - 16884003
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    ||||||||||||||||||| ||||| | || ||||| |||||||||||||||| || ||   | |||||||||||||||||||| |||| ||| | ||||    
T  16884112 aatcttggcataaaagcctcatcaa-agaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaataagcaataa 16884014  T
Q  192 aatcccatccc 202  Q
    |||| ||||||    
T  16884013 aatctcatccc 16884003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 16669813 - 16669749
Alignment:
Q  153 attcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||||||||||||| | ||   |||||||||||||||||||||||||||||||    
T  16669813 attcaaaatt-gatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 16669749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 21541411 - 21541564
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| | || |||||||||||||  ||||||| || ||||||| ||||||| ||||| ||  | |||||||||| |||||||||  ||||||| |    
T  21541411 atcatcatttaattagcagcggaatattatcatcaaaacatcaacaactgtttaaacctccaaaataatatcttggcat-aaagccttaagaacataa-t 21541508  T
Q  125 tcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    ||||| |  ||||||| |||||| |||  | ||||||  |||||||||||||||||    
T  21541509 tcaaccaacatagggccacaacatcaagttccaaaataagatacataggaaagaaa 21541564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 27279868 - 27279944
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||| |||||||||||| | |||||||| | ||||| |||||||||||||||||||| |||| | |||||||||||||    
T  27279868 caaaaattgatacataggta-gaaattaaactataaa-tcccatcccacgtatcagagtcctagacactttgagccacc 27279944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 218
Target Start/End: Original strand, 21732244 - 21732431
Alignment:
Q  40 tgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaa-ca 133  Q
    ||||||||||||||||||| |     |||||||||||||||||||  |||| | |   ||||||||||||||||||| ||||| |||| |||||||| ||    
T  21732244 tgcagcggaatatttgcattaaaagcaacaacaacaaccgtttaattctccttcaaataatcttggcataaaagcctcatcaagataaattcaacaatca 21732343  T
Q  134 ---atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
       | |||||||||||  |||  | ||||| |||||||||||||| ||||  |||  |  ||||||||||||  ||||||||||||||||    
T  21732344 aataaagggctacaaccacaaattccaaaaattgatacataggaatgaaaacaat--aagaaatcccatcccgtacgtatcagagcccta 21732431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 20639854 - 20639931
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    ||||||||||||| || | ||||||||||||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  20639854 cttggcataaaagtctcaacaacataagttcaaccactaaaaagggctacaacatcaagtttcaaaatatgatacata 20639931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 42096566 - 42096489
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  42096566 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 42096489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Complemental strand, 3653197 - 3653168
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaaa 220  Q
    ||||||||||||||||||||||||||||||    
T  3653197 aaatcccatcccacgtatcagagccctaaa 3653168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 24109701 - 24109572
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacata 121  Q
    ||||||||| |||| |||||||||||||  |||||||    |||||| ||| ||||||  ||||||||    ||| |||||||||||||| ||||| |||    
T  24109701 atcatcatttatttagcagcggaatattctcatcaaaacaacaacaataactgtttaattctccataaaattatcctggcataaaagcctcatcaa-ata 24109603  T
Q  122 agttcaa-caacaatagggctacaacagcaa 151  Q
    | ||||| |||||||||||||| | ||||||    
T  24109602 aattcaaacaacaatagggctatatcagcaa 24109572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 20578647 - 20578687
Alignment:
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | |||||||| ||||    
T  20578647 tcccatcccacgtatcagagccctagacactttgagtcacc 20578687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 194 - 234
Target Start/End: Original strand, 20586341 - 20586381
Alignment:
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | |||||||| ||||    
T  20586341 tcccatcccacgtatcagagccctagacactttgagtcacc 20586381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 16467 - 16688
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaac-aacaacaaccgtttaaaactccataactaaatcttggcataaaagcctt 112  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||  || |||||| ||||||| |||||||| ||||||||||| ||||||| ||    
T  16467 acatccttcaaaatcatcattaaatttgcagcggaatatttgcatcaaaataataacaactgtttaaacctccataattaaatcttggcttaaaagcatt 16566  T
Q  113 atcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcaga 212  Q
    | |||||||| ||||||||| ||||||||||| ||||||||  |||||||||||||||||||||||| |||| | ||||||||||||| |||||||||||    
T  16567 aacaacataaattcaacaaccatagggctacatcagcaataaccaaaatttgatacataggaaagaagttaagcaataaaatcccatcacacgtatcaga 16666  T
Q  213 gccctaaaaactttgagccacc 234  Q
    |||||||| |||||||||||||    
T  16667 gccctaaacactttgagccacc 16688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 128; Significance: 3e-66; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 40 - 234
Target Start/End: Complemental strand, 7353 - 7158
Alignment:
Q  40 tgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagg 138  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||    
T  7353 tgcagcagaatatttgcatcaaaacaacaacaaccgtttaaacctccataattaaatcttggcataaaagccttatcaacataaattcagcaacaatagg 7254  T
Q  139 gctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||| ||||||||| |||||||||||||||||||| ||||  || |  |||||||||||||||||||||||||||||| | |||||||||||||    
T  7253 gctacatcagcaatatccaaaatttgatacataggaatgaaagaaagcattaaaatcccatcccacgtatcagagccctagacactttgagccacc 7158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 40 - 234
Target Start/End: Complemental strand, 17567 - 17372
Alignment:
Q  40 tgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagg 138  Q
    |||||| |||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||| ||||||||||    
T  17567 tgcagcagaatatttgcatcaaaacaacaacaaccgtttaaacctccataattaaatcttggcataaaagccttatcaacataaattcagcaacaatagg 17468  T
Q  139 gctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||| ||||||||| |||||||||||||||||||| ||||  || |  |||||||||||||||||||||||||||||| | |||||||||||||    
T  17467 gctacatcagcaatatccaaaatttgatacataggaatgaaagaaagcattaaaatcccatcccacgtatcagagccctagacactttgagccacc 17372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 55440 - 55663
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||    |||||||||| ||||||| |||||||| |||||||||||||||||||    
T  55440 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaagc 55539  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    ||||||||||||| ||||||||| ||||||||||| || |||||||||||| |||||||||||||| |||  ||| |  |||||||||||||||||||||    
T  55540 cttatcaacataaattcaacaaccatagggctacatcaacaatattcaaaaattgatacataggaatgaaggtaa-cattaaaatcccatcccacgtatc 55638  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    ||||||||| | |||||||||||||    
T  55639 agagccctagacactttgagccacc 55663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1615 (Bit Score: 126; Significance: 4e-65; HSPs: 1)
Name: scaffold1615
Description:

Target: scaffold1615; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 38 - 234
Target Start/End: Complemental strand, 1047 - 850
Alignment:
Q  38 tttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaata 136  Q
    ||||| ||||||||||||||||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| |||| ||||||||    
T  1047 tttgcggcggaatatttgcatcaaaacaacaacaaccgtttaaacctccataattaaattttggcataaaagccttatcaacataaattcagcaacaata 948  T
Q  137 gggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||  || |  |||||||||||||||||||||||||||||| | |||||||||||||    
T  947 gggctacatcagcaatatccaaaatttgatacataggaatgaaagaaagcattaaaatcccatcccacgtatcagagccctagacactttgagccacc 850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 126; Significance: 4e-65; HSPs: 57)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 14723899 - 14724116
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagcctta 113  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||  |||||||| ||||||| |||||||| ||||||| ||||||||| |||||    
T  14723899 acatccttcaaaatcatcattaattttgcagcggaatatttgcatcaaa--acaacaactgtttaaacctccataattaaatct-ggcataaaatcctta 14723995  T
Q  114 tcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagag 213  Q
    ||||||||| | ||||||||||||||||||| ||||||||| ||||||||||||||||||||||||  ||| |  |||| ||||||||||||||||||||    
T  14723996 tcaacataaatccaacaacaatagggctacatcagcaatatccaaaatttgatacataggaaagaaggtaagcattaaattcccatcccacgtatcagag 14724095  T
Q  214 ccctaaaaactttgagccacc 234  Q
    ||||| | | |||||||||||    
T  14724096 ccctagacagtttgagccacc 14724116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 2707896 - 2708119
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||    |||||||||| ||||||| |||||||| |||||||||||||||||||    
T  2707896 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaagc 2707995  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    ||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||||| |||  ||| |  ||||||| |||||||||||||    
T  2707996 cttatcaacataaattcaacaaccatagggcttcatcagcaatattcaaaaattgatacataggaatgaaggtaa-cattaaaatctcatcccacgtatc 2708094  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    ||||||||| | |||||||||||||    
T  2708095 agagccctagacactttgagccacc 2708119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 24514484 - 24514262
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||||||||  |||||| |||| ||| ||||| |||||||||||||    
T  24514484 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactatttaaatctcc-taattaaattttggcataaaagc 24514386  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    ||||||||||||| ||||||||  ||||||||||| ||||||||||||||| |||||||||||||| |||  ||| |  ||||||| |||||||||||||    
T  24514385 cttatcaacataaattcaacaatcatagggctacatcagcaatattcaaaaattgatacataggaatgaaggtaa-cattaaaatctcatcccacgtatc 24514287  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    ||||||||| | |||||||||||||    
T  24514286 agagccctagacactttgagccacc 24514262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 38 - 234
Target Start/End: Complemental strand, 8761059 - 8760857
Alignment:
Q  38 tttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaa-gccttatcaacataagttcaacaac 132  Q
    |||||||||||||||||||||||||    || ||||||| ||||||| |||||||| ||||||||||||||||| |||||| |||||||| |||||||||    
T  8761059 tttgcagcggaatatttgcatcaaaacaacagcaacaactgtttaaacctccataattaaatcttggcataaaaagccttaacaacataaattcaacaac 8760960  T
Q  133 aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccat-cccacgtatcagagccctaaaaactttgagcc 231  Q
     ||| ||||||| ||||||||  |||||||||||||||||||||||| |||| | |||||||||||| ||||||||||||||||||| | ||||||||||    
T  8760959 catatggctacatcagcaataaccaaaatttgatacataggaaagaagttaagcaataaaatcccatccccacgtatcagagccctagacactttgagcc 8760860  T
Q  232 acc 234  Q
    |||    
T  8760859 acc 8760857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 7428858 - 7429078
Alignment:
Q  20 ttcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatc 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||||||||||||||||||||    
T  7428858 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaagccttatc 7428957  T
Q  116 aacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagag 213  Q
    ||||||| ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||| ||||||  |||||||||||    
T  7428958 aacataaattcaacaaccatagggctacgtcagcaatattcaaaacttgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcagag 7429057  T
Q  214 ccctaaaaactttgagccacc 234  Q
    ||||| | |||||||||||||    
T  7429058 ccctagacactttgagccacc 7429078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 20 - 175
Target Start/End: Complemental strand, 14595316 - 14595157
Alignment:
Q  20 ttcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatc 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||||||||||||||||||||    
T  14595316 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacagcaacagtttaaatctccataattaaatcttggcataaaagccttatc 14595217  T
Q  116 aacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaa 175  Q
    ||||||| ||||||||| ||||||||||  ||||||||||||||| ||||||||||||||    
T  14595216 aacataaattcaacaaccatagggctacgtcagcaatattcaaaaattgatacataggaa 14595157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 38 - 234
Target Start/End: Complemental strand, 8768796 - 8768594
Alignment:
Q  38 tttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaa-gccttatcaacataagttcaacaac 132  Q
    |||||||||||||||||||||||||    || ||||||| ||||||| |||||||| ||||| ||||||||||| |||||| |||||||| |||||| ||    
T  8768796 tttgcagcggaatatttgcatcaaaacaacagcaacaactgtttaaacctccataattaaatattggcataaaaagccttaacaacataaattcaacgac 8768697  T
Q  133 aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccat-cccacgtatcagagccctaaaaactttgagcc 231  Q
     ||||||||||| ||||||||  |||||||||||||||||||||||| |||| | |||||||| ||| ||||||||||||||||||| | ||||||||||    
T  8768696 catagggctacatcagcaataaccaaaatttgatacataggaaagaagttaagcaataaaatctcatccccacgtatcagagccctagacactttgagcc 8768597  T
Q  232 acc 234  Q
    |||    
T  8768596 acc 8768594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 28707466 - 28707674
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| ||||  |||||| |||||||| ||||||||||||||||||||    
T  28707466 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 28707564  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtat 208  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||    
T  28707565 ttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtat 28707664  T
Q  209 cagagcccta 218  Q
    ||||||||||    
T  28707665 cagagcccta 28707674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 232
Target Start/End: Original strand, 22905862 - 22906070
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaacaacaac----aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    |||||||| | ||||||||||||||  |||||||||||||     ||| |||| |||||||||||  || ||||||||| ||||||||| || |||||      
T  22905862 atcattaaatctgcagcggaatattctcatcaaacaacaattcataactgttttaaactccataataaattcttggcatgaaagccttaacatcataaaa 22905961  T
Q  125 tc-aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    || |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| | ||    
T  22905962 tccaacatcaatagggctacaacagcaatattctaaatttgatacataggaaagaaattaaacgatgaaatctcatcccacgtatcagagccctagacac 22906061  T
Q  224 tttgagcca 232  Q
    |||||||||    
T  22906062 tttgagcca 22906070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 232
Target Start/End: Original strand, 22906506 - 22906714
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaacaacaac----aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    |||||||| | ||||||||||||||  |||||||||||||     ||| |||| |||||||||||  || ||||||||| ||||||||| || |||||      
T  22906506 atcattaaatctgcagcggaatattctcatcaaacaacaattcataactgttttaaactccataataaattcttggcatgaaagccttaacatcataaaa 22906605  T
Q  125 tc-aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    || |||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||| | ||    
T  22906606 tccaacatcaatagggctacaacagcaatattctaaatttgatacataggaaagaaattaaacgatgaaatctcatcccacgtatcagagccctagacac 22906705  T
Q  224 tttgagcca 232  Q
    |||||||||    
T  22906706 tttgagcca 22906714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 38 - 234
Target Start/End: Complemental strand, 19301290 - 19301092
Alignment:
Q  38 tttgcagcggaata-tttgcatcaaacaacaa-caaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaat 135  Q
    |||||||||||||| |||||||||||  |||| |||| ||| ||| |||||| | |||||||||||||||||||| | ||||||||| |||||  || ||    
T  19301290 tttgcagcggaataatttgcatcaaatgacaaacaactgttcaaatctccatgaataaatcttggcataaaagccatttcaacataaattcaatcaccat 19301191  T
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| |||||| |||||||| |||||||||||||||||| | || | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  19301190 agggctacatcagcaacattcaaaaattgatacataggaaagaattcaagcaataaaatcccatcccacgtatcagagccctagacactttgagccacc 19301092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 31 - 234
Target Start/End: Complemental strand, 938313 - 938106
Alignment:
Q  31 cattaattttgcagcggaatatttgcatcaaacaacaac----aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc 126  Q
    |||||| | ||||||||||||||  |||||||||||||     ||| ||||||| ||||||||  || | ||||||| ||||||||| || |||||  ||    
T  938313 cattaaatatgcagcggaatattctcatcaaacaacaattcataactgtttaaa-ctccataataaatttttggcatgaaagccttaacatcataaaatc 938215  T
Q  127 -aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactt 225  Q
     |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||    
T  938214 caacatcaaaagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaacaataaaatctcatcccacgtatcagagccctagacactt 938115  T
Q  226 tgagccacc 234  Q
    |||| ||||    
T  938114 tgagtcacc 938106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 23954832 - 23955043
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| |||||  |||||||||||||| |||||||| ||||||||||||    ||||| |||| ||||||| |||||||| ||||||||||||||||| |    
T  23954832 acatccttcaaagtcatcattaattttacagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaaac 23954931  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgta 207  Q
    ||||||||||||| ||||||||| ||||| ||||  ||||||||||||||| |||||| ||||||| ||||   |   | |||||||||||||  |||||    
T  23954932 cttatcaacataaattcaacaaccataggactacgtcagcaatattcaaaaattgatatataggaatgaaaaacaataagaaaatcccatcccgtacgta 23955031  T
Q  208 tcagagccctaa 219  Q
    ||||||||||||    
T  23955032 tcagagccctaa 23955043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 40 - 234
Target Start/End: Original strand, 19726160 - 19726359
Alignment:
Q  40 tgcagcggaatatttgcatcaaacaacaac----aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaa 134  Q
    ||||||||||||||  |||||||||||||     ||| |||| |||||||||||  || ||||||||| ||||||||| || || ||  || ||||  |     
T  19726160 tgcagcggaatattatcatcaaacaacaattcataactgttttaaactccataataaattcttggcatgaaagccttaacatcacaaaatccaacataag 19726259  T
Q  135 tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||| |||||||||    
T  19726260 tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaacaataaaatctcatcccacgtatcagagccctagacactctgagccacc 19726359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 14383989 - 14383843
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat 185  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  | |     
T  14383989 ataattaaatcttggcataaaagccttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaataaaggtga- 14383891  T
Q  186 cgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
      || |||||||||||||||||||||||||||| | |||||||||||||    
T  14383890 -cattaaatcccatcccacgtatcagagccctagacactttgagccacc 14383843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 19589150 - 19589003
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat 185  Q
    |||| ||||||||||||| ||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  | |     
T  19589150 ataattaaatcttggcattaaagccttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaacaaaggtga- 19589052  T
Q  186 cgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |  |||||||||||||||||||||||||||||| | |||||||||||||    
T  19589051 cattaaaatcccatcccacgtatcagagccctagacactttgagccacc 19589003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 1592423 - 1592526
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatc-gataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||| |||||||||||||||| | |||||||||    
T  1592423 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaacacataaaatcccatcctacgtatcagagccctagacactttgagc 1592522  T
Q  231 cacc 234  Q
    ||||    
T  1592523 cacc 1592526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 21717452 - 21717349
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatc-gataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||| | |||||||||    
T  21717452 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaacacataaaatcccatcccatgtatcagagccctagacactttgagc 21717353  T
Q  231 cacc 234  Q
    ||||    
T  21717352 cacc 21717349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 21725288 - 21725185
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatc-gataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||| |||||||||||||| | |||||||||    
T  21725288 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaacacataaaatcccatcccatgtatcagagccctagacactttgagc 21725189  T
Q  231 cacc 234  Q
    ||||    
T  21725188 cacc 21725185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 14375881 - 14375735
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat 185  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  | |     
T  14375881 ataattaaatcttggcataaaagccttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaataaaggtga- 14375783  T
Q  186 cgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
      || ||||| |||||||||||||||||||||| | |||||||||||||    
T  14375782 -cattaaatctcatcccacgtatcagagccctagacactttgagccacc 14375735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 93 - 234
Target Start/End: Original strand, 19439277 - 19439416
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    ||||||||||||||||||| || |||| || |||| |||| |||||||||||  ||||||||||||||||||||||||||| ||||| |||| | |||||    
T  19439277 aatcttggcataaaagcctaat-aacagaaattcatcaaccatagggctacattagcaatattcaaaatttgatacatagg-aagaagttaagcaataaa 19439374  T
Q  193 atcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||| |||||||||||||||||||||| | |||||||||||||    
T  19439375 atctcatcccacgtatcagagccctagacactttgagccacc 19439416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 22757908 - 22758015
Alignment:
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaacttt 226  Q
    |||| |||||||||||||||| ||||||||||||||| ||||||||||||||| |||| | |||||||| |||||||||||||||||||||| | |||||    
T  22757908 aacatcaatagggctacaacatcaatattcaaaatttcatacataggaaagaagttaagcaataaaatctcatcccacgtatcagagccctagacacttt 22758007  T
Q  227 gagccacc 234  Q
    ||||||||    
T  22758008 gagccacc 22758015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 5290746 - 5290643
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaa-gaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    |||||||| ||||||| ||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||||||||||||||| | |||||||||    
T  5290746 caataggggtacaacaacaatattcaaaatttaatacataggaaaagaaattaagcaataaaatcccatcccacgtatcagagccctacacactttgagc 5290647  T
Q  231 cacc 234  Q
    ||||    
T  5290646 cacc 5290643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 218
Target Start/End: Complemental strand, 14616833 - 14616709
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattc-aaaatttgatacataggaaagaaattaatcgataaa 192  Q
    |||||| |||||||||| ||||| |||| ||||| |||||||||||||||| |||||| |||| ||||||||||||||||||| |||| ||| |  ||||    
T  14616833 tcttggaataaaagcctcatcaaaataaattcaaacaacaatagggctacatcagcaa-attctaaaatttgatacataggaatgaaagtaagcattaaa 14616735  T
Q  193 atcccatcccacgtatcagagcccta 218  Q
    ||| ||||||||||||||||||||||    
T  14616734 atctcatcccacgtatcagagcccta 14616709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 11284383 - 11284283
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||||| ||| |||||||||||||| ||||| ||||  ||   ||||||||||||||||||||||||||||||| | ||||||||||||    
T  11284383 atagggctacaacagcattatccaaaatttgatacacaggaatgaaagaaaataataaaatcccatcccacgtatcagagccctagacactttgagccac 11284284  T
Q  234 c 234  Q
    |    
T  11284283 c 11284283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 19818508 - 19818638
Alignment:
Q  92 aaatcttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgat 189  Q
    |||||||||||||||||||| | | |||||| |||||||||  |||| |||||||||| |||  | |||||||||||||||||||| |||| ||| | ||    
T  19818508 aaatcttggcataaaagcctcaacgacataaattcaacaaccaaataaggctacaacatcaagttccaaaatttgatacataggaatgaaaataagcaat 19818607  T
Q  190 aaaatcccatccc--acgtatcagagcccta 218  Q
    |||||||||||||  ||||||||||||||||    
T  19818608 aaaatcccatcccgtacgtatcagagcccta 19818638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 20011540 - 20011400
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||||| |||| | |||||||||  |||||  || | ||||||||| ||||||||||  ||| |||||||||||||||||| | || | ||||||    
T  20011540 tcttggcataagagccatttcaacataaaattcaatcaccaaagggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaaa 20011441  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | ||| |||||||||    
T  20011440 tcccatcccacgtatcagagccctagacactgtgagccacc 20011400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 19285778 - 19285887
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| |||||  ||||||||||||||||| || ||||  || | ||||||||||||||||||||||||||||||| | ||    
T  19285778 ttcatcaaccatagggctacaacaacaataaccaaaatttgatacatag-aatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacac 19285876  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  19285877 tttgagccacc 19285887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 18788049 - 18788149
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||   | |||||| |||||||||||||||||||||| | ||||||||||||    
T  18788049 atagggctacaacagcattatccaaaatttgatacataggaatgaaagaaaaaaaaaaaatcacatcccacgtatcagagccctagacactttgagccac 18788148  T
Q  234 c 234  Q
    |    
T  18788149 c 18788149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 29615734 - 29615634
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    |||||||||||||| || ||| |||||||||||||||||||| ||||  || |  |||||||||||||||||||||||||||||| | ||| ||||||||    
T  29615734 atagggctacaacaacattatccaaaatttgatacataggaatgaaagaaaacagtaaaatcccatcccacgtatcagagccctagacactgtgagccac 29615635  T
Q  234 c 234  Q
    |    
T  29615634 c 29615634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 234
Target Start/End: Original strand, 30270680 - 30270845
Alignment:
Q  66 caacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttga 165  Q
    |||||||  |||||||||||| ||| | |||||||||||||||||  | ||| |||| ||||  ||   ||||||||||||| || ||  ||||||||||    
T  30270680 caacaactatttaaaactcca-aacaatatcttggcataaaagcccaaccaaaataa-ttcataaatcgtagggctacaacatcattaaccaaaatttga 30270777  T
Q  166 tacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||| || ||||| || | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  30270778 tacatag-aatgaaataaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 30270845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 9100565 - 9100467
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||| ||||||  ||| |||||||||||||||||| | || | ||||||||||||||||||||||||||||||| | ||| |||||||||    
T  9100565 agggctacatcagtaatatttcaaaattgatacataggaaagaattcaagcaataaaatcccatcccacgtatcagagccctagacactgtgagccacc 9100467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 12166869 - 12166978
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| || ||  ||||||||||||||||| || ||||  || | ||||||||||||||||||||||||||||||| | ||    
T  12166869 ttcatcaaccatagggctacaacaacattaaccaaaatttgatacatag-aatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacac 12166967  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  12166968 tttgagccacc 12166978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 19876961 - 19877070
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| || ||  ||||||||||||||||| || ||||  || | ||||||||||||||||||||||||||||||| | ||    
T  19876961 ttcatcaaccatagggctacaacaacattaaccaaaatttgatacatag-aatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacac 19877059  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  19877060 tttgagccacc 19877070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 19882737 - 19882846
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| || ||  ||||||||||||||||| || ||||  || | ||||||||||||||||||||||||||||||| | ||    
T  19882737 ttcatcaaccatagggctacaacaacattaaccaaaatttgatacatag-aatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacac 19882835  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  19882836 tttgagccacc 19882846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 23837210 - 23837319
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| || ||  ||||||||||||||||| || ||||  || | ||||||||||||||||||||||||||||||| | ||    
T  23837210 ttcatcaaccatagggctacaacaacattaaccaaaatttgatacatag-aatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacac 23837308  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  23837309 tttgagccacc 23837319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 18799029 - 18799129
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||     |||||| |||||||||||||||||||||| | ||||||||||||    
T  18799029 atagggctacaacagcattatccaaaatttgatacataggaatgaaagaaacattaaaaatctcatcccacgtatcagagccctagacactttgagccac 18799128  T
Q  234 c 234  Q
    |    
T  18799129 c 18799129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 218
Target Start/End: Complemental strand, 20009481 - 20009357
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||||| |||| | |||||||||  |||||  || | || |||||| ||||||||||  ||| |||||||||||||||||| | || | ||||||    
T  20009481 tcttggcataagagccatttcaacataaaattcaatcaccaaagagctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaaa 20009382  T
Q  194 tcccatcccacgtatcagagcccta 218  Q
    |||||||||||||||||||||||||    
T  20009381 tcccatcccacgtatcagagcccta 20009357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 34641512 - 34641414
Alignment:
Q  135 tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||  || ||  ||||||||||||||||| || ||||| || | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  34641512 tagggctacaacgtcattaaccaaaatttgatacatag-aatgaaataaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 34641414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 34648186 - 34648088
Alignment:
Q  135 tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||  || ||  ||||||||||||||||| || ||||| || | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  34648186 tagggctacaacgtcattaaccaaaatttgatacatag-aatgaaataaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 34648088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 19787418 - 19787309
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| || ||  ||||||||||||||||| || ||||  || | |||||||| |||||||||||||||||||||| | ||    
T  19787418 ttcatcaaccatagggctacaacaacattaaccaaaatttgatacatag-aatgaaagaaaacaataaaatctcatcccacgtatcagagccctagacac 19787320  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  19787319 tttgagccacc 19787309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 29096426 - 29096524
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||| ||||||  ||| |||||||||||||||||| | || | |||||||||||||||| |||||||||||||| | ||| |||||||||    
T  29096426 agggctacatcagtaatatttcaaaattgatacataggaaagaattcaagcaataaaatcccatcccatgtatcagagccctagacactgtgagccacc 29096524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 124 - 220
Target Start/End: Complemental strand, 25471240 - 25471145
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaa 220  Q
    |||| |||| |||||||||||||| |||||  ||||||||||||||||| || |||   || | |||||||||||||||||||||||||||||||||    
T  25471240 ttcatcaaccatagggctacaacaacaataaccaaaatttgatacatag-aatgaaggaaaacaataaaatcccatcccacgtatcagagccctaaa 25471145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 218
Target Start/End: Original strand, 17413530 - 17413727
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    |||||||||||| ||||||||||||||||||||||     |||||| ||  ||||||  ||||||||   ||||||||||||||| | | |||||  |||    
T  17413530 catcattaattt-gcagcggaatatttgcatcaaaagcaacaacaataattgtttaattctccataaaataatcttggcataaaaacatcatcaaagtaa 17413628  T
Q  123 gttcaacaacaata-gggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
     |  |||||||||| |||||||| |||||   | ||||||||||||||||||||  ||| ||| | || ||||||||||||  ||||||||||||||||    
T  17413629 ttcaaacaacaataagggctacatcagcatgttccaaaatttgatacataggaataaaaataagcaattaaatcccatcccgtacgtatcagagcccta 17413727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 14032818 - 14032894
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||| | |||||||| | ||||| |||||||||||||||||||| |||| | |||||||||||||    
T  14032818 caaaatttgatacataggta-gaaattaaactataaa-tcccatcccacgtatcagagtcctagacactttgagccacc 14032894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 26419384 - 26419264
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| ||||  ||||||||||||  ||||||| ||||||||||  |||||| ||||| ||  |||||||||||| ||||||||| |||||||| |    
T  26419384 atcatcatttatttaacagcggaatattatcatcaaaacaacaacaactttttaaacctccaaaataaaatcttggcat-aaagccttaacaacataa-t 26419287  T
Q  125 tcaacaacaatagggctacaaca 147  Q
    |||||||  ||||||| ||||||    
T  26419286 tcaacaaacatagggccacaaca 26419264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 31249907 - 31249990
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| |||||||  ||| |||||||||||||| ||| | ||   |||||||| ||||||||||||||||||||||    
T  31249907 atagggctacaacaacaatatttcaaaattgatacataggaa-gaattcaagaaataaaatctcatcccacgtatcagagcccta 31249990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 13940024 - 13940084
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    ||||| |||||||||||||||||||| |||  |  ||||||||||||||||||||||||||||    
T  13940024 caaaaattgatacataggaaagaaatcaat--aagaaatcccatcccacgtatcagagcccta 13940084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 218
Target Start/End: Complemental strand, 14582385 - 14582299
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa-tcccatcccacgtatcagagcccta 218  Q
    ||||||||||||||   ||| ||||||||||||||||||||||| ||||| || | | | || |||||||||||||||||||||||||    
T  14582385 caatagggctacaatgacaacattcaaaatttgatacataggaa-gaaatcaagcaaaataagtcccatcccacgtatcagagcccta 14582299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 164 - 218
Target Start/End: Original strand, 25633796 - 25633850
Alignment:
Q  164 gatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||||| | ||   |||||||||||||||||||||||||||||||    
T  25633796 gatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 25633850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 28360381 - 28360297
Alignment:
Q  134 atagggctacaacagcaa-tattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    ||||||||||||||  || ||| ||||||||||||||||| || ||| |||| | |  ||||||||||||||||||||||||||||    
T  28360381 atagggctacaacataaaatatccaaaatttgatacatag-aatgaatttaaacaaagaaatcccatcccacgtatcagagcccta 28360297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 19448837 - 19448917
Alignment:
Q  42 cagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaa 117  Q
    |||||||||||||||||||||     |||||||||| ||||||  ||||||||   ||||||||||||||||||| |||||    
T  19448837 cagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaagtaatcttggcataaaagcctcatcaa 19448917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 26 - 180
Target Start/End: Complemental strand, 21794116 - 21793963
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| | || |||||||||||||  ||||||| || ||||||| ||||||| ||||| ||  | |||||||||| ||||||||| |||||||| |    
T  21794116 atcatcatttaattagcagcggaatattatcatcaaaacatcaacaactgtttaaacctccaaaataatatcttggcat-aaagccttaacaacataa-t 21794019  T
Q  125 tcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    ||||| |  ||||||| |||| | |||  | ||||||  |||||||| ||||||||    
T  21794018 tcaaccaacatagggccacaatatcaagttccaaaataagatacatatgaaagaaa 21793963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 23235588 - 23235497
Alignment:
Q  61 aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaa 151  Q
    |||||||||||| ||||||  |||||| |    ||| |||||||||||||| ||||| |||| ||||| |||||||||||||||| ||||||    
T  23235588 aacaacaacaactgtttaattctccatcaaattatcctggcataaaagcctcatcaaaataaattcaaacaacaatagggctacatcagcaa 23235497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 24561796 - 24561873
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  24561796 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 24561873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 25811522 - 25811468
Alignment:
Q  164 gatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||||| | ||   |||||||| ||||||||||||||||||||||    
T  25811522 gatacataggaaagaattaaaataataaaatcacatcccacgtatcagagcccta 25811468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 19467363 - 19467443
Alignment:
Q  42 cagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaa 117  Q
    |||||||||||||||||||||     |||||||||| ||||||  || |||||   ||||||||||||||||||| |||||    
T  19467363 cagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctacataaagtaatcttggcataaaagcctcatcaa 19467443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 124; Significance: 6e-64; HSPs: 2)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 124; E-Value: 6e-64
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 17748 - 17524
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||    |||||||||  ||||||| |||||||| ||| ||||||||||||||     
T  17748 acatccttcaaaatcatcattaattttgcagcggaatatttgcatcaaaacaacaacaacaattgtttaaatctccataattaattcttggcataaaagt 17649  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| ||||  |||||||||||||| |||  ||| |  |||||||||||||||||||||    
T  17648 cttatcaacataaattcaacaacaatagggctacatcagcaatatccaaatattgatacataggaatgaaggtaagcattaaaatcccatcccacgtatc 17549  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    ||||||||| | |||||||||||||    
T  17548 agagccctagacactttgagccacc 17524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 2992 - 2768
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||||||    |||||||||  ||||||| |||||||| ||| |||||||||||||||    
T  2992 acatccttcaaaatcatcattaattttgcagcggaatatttgcatcaaaacaacaacaacaattgtttaaatctccataattaattcttggcataaaagc 2893  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| ||||| |||||||||||||| |||  ||| |  ||||||| |||||||||||||    
T  2892 cttatcaacataaattcaacaacaatagggctacatcagcaatatccaaaaattgatacataggaaggaaggtaagcattaaaatctcatcccacgtatc 2793  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    | | ||||| | |||||||||||||    
T  2792 aaatccctagacactttgagccacc 2768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 123; Significance: 3e-63; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 172465 - 172255
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||||||||||||||||||||||||||||| |||||||||||    |||||| ||| ||||||| |||||||| |||||||||||||||||||    
T  172465 acatccttcaagatcatcattaattttgcagcggaatgtttgcatcaaaacaacaacaataactgtttaaacctccataattaaatcttggcataaaagc 172366  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgta 207  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||||| |||| ||| |  |||||||||||| |  |||||    
T  172365 cttatcaacataaattcaacaacaatagggctacatcagcaatatccaaaatttgatacataggaatgaaagtaagcattaaaatcccatctcgtacgta 172266  T
Q  208 tcagagcccta 218  Q
    |||||||||||    
T  172265 tcagagcccta 172255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 193 - 234
Target Start/End: Complemental strand, 60208 - 60167
Alignment:
Q  193 atcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||| |||| | |||||||||||||    
T  60208 atcccatcccacgtatcagagtcctagacactttgagccacc 60167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 120; Significance: 2e-61; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 14062439 - 14062662
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||    |||||||||| ||| ||| |||||||| |||||||||||||||||||    
T  14062439 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacagcaacaacaactgttaaaatctccataattaaatcttggcataaaagc 14062538  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    ||||||||||||| |||||| || ||||||||||| ||||||||||||||| |||||||||||||| |||  ||| |  |||||||||||||||||||||    
T  14062539 cttatcaacataaattcaacgaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaggtaa-cattaaaatcccatcccacgtatc 14062637  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    ||||||||| |  ||||||||||||    
T  14062638 agagccctagaccctttgagccacc 14062662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 41529731 - 41529508
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||| ||||||    |||||||||| ||||||| ||| |||| |||||||||||||||||||    
T  41529731 acatctttcaaaatcatcattaattttgcagcggaaaatttgtatcaaaacaacaacaacaactgtttaaatctctataattaaatcttggcataaaagc 41529632  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatc 209  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| |||  ||| |  |||||||| ||||||||||||    
T  41529631 cttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaggtaa-cattaaaatcctatcccacgtatc 41529533  T
Q  210 agagccctaaaaactttgagccacc 234  Q
    ||||||||| | |||||||||||||    
T  41529532 agagccctagacactttgagccacc 41529508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 16220757 - 16220984
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||||||||  |||||| |||||||| |||||||||||||||||||    
T  16220757 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactatttaaatctccataattaaatcttggcataaaagc 16220856  T
Q  110 cttatcaacataagttcaacaa-ca---atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacg 205  Q
    ||||||||||||| |||||||| ||   ||||||||||| |||||||||| |||| |||||||||||||| |||  ||| |  |||||||||||||||||    
T  16220857 cttatcaacataaattcaacaatcatatatagggctacatcagcaatattaaaaaattgatacataggaatgaaggtaa-cattaaaatcccatcccacg 16220955  T
Q  206 tatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||| | |||||||||||||    
T  16220956 tatcagagccctagatactttgagccacc 16220984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 37839663 - 37839495
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| ||||  |||||| |||||||| ||||||||||||||||||||    
T  37839663 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 37839565  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  37839564 ttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaa 37839495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 26 - 234
Target Start/End: Original strand, 14479996 - 14480205
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaac-tccataactaaatcttggcataaaagccttatcaacataag 123  Q
    |||| |||| |||| ||||| |||||||  ||||||| ||||||||||  |||||||| |||||||  |||| ||||||||||||||||| ||||| ||     
T  14479996 atcaccatttatttagcagcagaatattctcatcaaaacaacaacaactatttaaaacctccataataaaatattggcataaaagccttaacaacaaaa- 14480094  T
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    | ||||| |||||||||||||||| |||||| |||||||| ||||||||||||||||||||  |||||||||| ||||||||||||||||||||| | ||    
T  14480095 tccaacatcaatagggctacaacaacaatatccaaaatttcatacataggaaagaaattaaatgataaaatcctatcccacgtatcagagccctagacac 14480194  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  14480195 tttgagccacc 14480205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 93 - 234
Target Start/End: Complemental strand, 26078274 - 26078134
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    ||||||||||||||||||| | ||||  || |||| |||| ||||||||||| |||||||||||||||||||||||||||||||||| |||| |||||||    
T  26078274 aatcttggcataaaagcctaa-caacggaaattcatcaaccatagggctacatcagcaatattcaaaatttgatacataggaaagaagttaagcgataaa 26078176  T
Q  193 atcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  26078175 atcccatcccacgtatcagagccctagacactttgagccacc 26078134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 126 - 234
Target Start/End: Complemental strand, 17000701 - 17000593
Alignment:
Q  126 caacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactt 225  Q
    ||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| | ||||    
T  17000701 caacaccaatagggctacaacaacaatattcaaaatttgatacataggaaagaaattaagcgataaaatcccatcccacgtatcagagccctagacactt 17000602  T
Q  226 tgagccacc 234  Q
    |||||||||    
T  17000601 tgagccacc 17000593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 43 - 234
Target Start/End: Original strand, 23121155 - 23121351
Alignment:
Q  43 agcggaatatttgcatcaaacaacaac----aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatag 137  Q
    |||||||||||  |||||||||||||     ||| |||| |||||||||||  || ||||||||| ||||||||| || |||||  || ||||  | |||    
T  23121155 agcggaatattatcatcaaacaacaattcataactgttttaaactccataatcaattcttggcatgaaagccttaacatcataaaatccaacataagtag 23121254  T
Q  138 ggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  23121255 ggctacaacagcgatattcaaaatttgatacataggaaagaaattaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 23121351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 27 - 180
Target Start/End: Complemental strand, 41939987 - 41939830
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    |||||||||||||| |||||||| ||||||||||||    ||||| |||| ||||||| |||||||| ||||||||||||||||| ||||||||||||||    
T  41939987 tcatcattaattttacagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaaaccttatcaacataa 41939888  T
Q  123 gttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
     ||||||||| ||||||||||  ||||||||||||||| |||||| ||||||| ||||    
T  41939887 attcaacaaccatagggctacgtcagcaatattcaaaaattgatatataggaatgaaa 41939830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 79 - 234
Target Start/End: Original strand, 16750467 - 16750623
Alignment:
Q  79 aaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaag 177  Q
    |||||||||||  || ||||||||| ||||||||| || |||||  || |||| || |||||||| |||| || ||||||||||||||||||||||||||    
T  16750467 aaactccataataaattcttggcatgaaagccttaacatcataaaatccaacatcagtagggctataacatcattattcaaaatttgatacataggaaag 16750566  T
Q  178 aaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  16750567 aaattaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 16750623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 42598392 - 42598224
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| ||||  |||||| |||||||| ||||| |||||||||||||     
T  42598392 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacatcaactatttaaatctccataattaaatattggcataaaagca 42598294  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    |||||||||||| ||||||||| ||||||||||| ||| |||||| |||| |||||||||||||| ||||    
T  42598293 ttatcaacataaattcaacaaccatagggctacatcagtaatatttaaaaattgatacataggaatgaaa 42598224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 15406548 - 15406654
Alignment:
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaacttt 226  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||| | |||||    
T  15406548 aacatcaatagggctacaacatcaatattcaaaatttgatacataggaaagaaattaagcaataaaatcccatcccacgtatcagaaccctagacacttt 15406647  T
Q  227 gagccac 233  Q
    |||||||    
T  15406648 gagccac 15406654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 142 - 234
Target Start/End: Complemental strand, 43285412 - 43285320
Alignment:
Q  142 acaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| | |||||||||||||    
T  43285412 acaacagcaatattcaaaatttgatacataggaaagaaattaaacaacaaaatcccatcccacgtatcagagccctagacactttgagccacc 43285320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 55503811 - 55503587
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaag 108  Q
    ||||| |||||| |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||||| |||||| | |    
T  55503811 acatccttcaag-tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatctttggcataga-g 55503714  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgt 206  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||    
T  55503713 ccttatcaacataaattcaacaaccatagggctacgtcagcaatattcaaaa-ttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgt 55503615  T
Q  207 atcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||||||||    
T  55503614 atcagagccctagacactttgagccacc 55503587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 14697736 - 14697948
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||||||| | |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| ||||| || |||||||| ||||||||||||||    
T  14697736 tcatcatttaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatttttggcataaa-gccttatcaacata 14697834  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaa 219  Q
    | ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||   |   | | |||||||||||  ||||||||||||||||     
T  14697835 aattcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaaaacaataagagaatcccatcccgtacgtatcagagccctag 14697933  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  14697934 acactttgagccacc 14697948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 2585806 - 2585610
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag 123  Q
    ||||||||||| ||| |||||||||||||| |||     ||||||||||||||||   |||||||| ||||||||| ||||||||||| | ||||||||     
T  2585806 atcattaattt-gcaacggaatatttgcattaaaagcatcaacaacaaccgtttagttctccataa-taaatcttgacataaaagcctcaacaacataaa 2585709  T
Q  124 ttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
    |||||||||  || |||||||||||| |||  | |||||||||||||||||||| |||| ||  |  ||||||||||||||  ||||||||||||||||    
T  2585708 ttcaacaaccaaaaagggctacaacatcaagttccaaaatttgatacataggaatgaaagtacacattaaaatcccatcccgtacgtatcagagcccta 2585610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 4170012 - 4170223
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    |||| ||||| |||||||||||| |||||| ||||| |||| |   |||  ||||||| |||||||| |||   |||||||||| |||||||||||||||    
T  4170012 tcattattaaatttgcagcggaaaatttgcctcaaaacaacgatagcaatagtttaaatctccataattaatctttggcataaa-gccttatcaacataa 4170110  T
Q  123 gttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaaa 220  Q
     ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||   |   | |||||||||||||  |||||||||||||||| |    
T  4170111 attcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtatcagagccctaga 4170209  T
Q  221 aactttgagccacc 234  Q
     |||||||||||||    
T  4170210 cactttgagccacc 4170223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 27904866 - 27904965
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    |||||||||||||| |||||||  ||||| ||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||||||||||||    
T  27904866 atagggctacaacaacaatatttcaaatt-gatacataggaaagaaattaaacaataaaatcacatcccacgtatcagagccctagacactttgagccac 27904964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 31132358 - 31132197
Alignment:
Q  74 gtttaaaactccataactaaatctt-ggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    ||||||| |||||||| || ||||| |||||||| ||||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||    
T  31132358 gtttaaatctccataattagatctttggcataaa-gccttatcaacataaattcaacaaccatagggctacgtcagcaatattc-aaatttgatacatag 31132261  T
Q  173 gaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaaaaactttgagccacc 234  Q
    ||| ||||   |   | |||||||||||||  |||||||||||||||| | |||||||||||||    
T  31132260 gaatgaaaaacaataagaaaatcccatcccgtacgtatcagagccctagacactttgagccacc 31132197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 8056158 - 8056057
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat-cgataaaatcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||  | ||||||||||||||||||||||||||||||| | |||||||||||    
T  8056158 atagggctacaacagcattatccaaaatttgatacataggaatgaaagaaaaacaataaaatcccatcccacgtatcagagccctagacactttgagcca 8056059  T
Q  233 cc 234  Q
    ||    
T  8056058 cc 8056057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 14556723 - 14556525
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||| ||||||||||||||||||| |||     |||| ||||| ||||||  ||||||||    ||| |||||||||||||| ||||| ||||    
T  14556723 catcattaattatgcagcggaatatttgcattaaaagcgacaacgacaactgtttaattctccataaaatcatcatggcataaaagcctcatcaaaataa 14556624  T
Q  123 gttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
     ||||| || ||||||||||| | |||| || | ||||||| |||||||||||| |||| ||| |  ||||||||||||||  ||||||||||||||||    
T  14556623 attcaaacaccaatagggctatatcagcgatttccaaaattcgatacataggaatgaaagtaaacattaaaatcccatcccgtacgtatcagagcccta 14556525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 16156237 - 16156363
Alignment:
Q  92 aaatcttggcataaaagccttatcaacataagttcaacaacaa-tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata 190  Q
    |||||||||||||||||||| | | |||||| ||||| | ||| ||||||||||||| |||  | |||||||||||||||||||||||||  || |  ||    
T  16156237 aaatcttggcataaaagcctcaacgacataa-ttcaaaatcaaatagggctacaacatcaagttccaaaatttgatacataggaaagaaagaaaacatta 16156335  T
Q  191 aaatcccatcccacgtatcagagcccta 218  Q
    ||||||||||||||||||||||||||||    
T  16156336 aaatcccatcccacgtatcagagcccta 16156363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 14508447 - 14508344
Alignment:
Q  130 aacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgag 229  Q
    ||||| ||||||||| |||||   | ||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||| | ||||||||    
T  14508447 aacaaaagggctacatcagcatgttccaaaaattgatacataggaaagaaattaaacaataaa-tcccatcccacgtatcagagccctagacactttgag 14508349  T
Q  230 ccacc 234  Q
    |||||    
T  14508348 ccacc 14508344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 16148372 - 16148233
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||| |||||| | |||||||||  |||||  |||| ||||||||| ||||||||||  |||  ||||||||||||||||| | || | ||||||    
T  16148372 tcttggcatgaaagccatttcaacataaaattcaatcacaa-agggctacatcagcaatatttcaaaaatgatacataggaaagaattcaagcaataaaa 16148274  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | ||| |||||||||    
T  16148273 tcccatcccacgtatcagagccctagacactgtgagccacc 16148233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 16152091 - 16152217
Alignment:
Q  92 aaatcttggcataaaagccttatcaacataagttcaacaac-aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata 190  Q
    |||||||||||||||||| | | | |||||| ||||| | | ||||||||||||||| |||  | |||||||||||||||||||||||||  || |  ||    
T  16152091 aaatcttggcataaaagcatcaacgacataa-ttcaaaatcaaatagggctacaacatcaagttccaaaatttgatacataggaaagaaagaaaacatta 16152189  T
Q  191 aaatcccatcccacgtatcagagcccta 218  Q
    ||||||||||||||||||||||||||||    
T  16152190 aaatcccatcccacgtatcagagcccta 16152217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 132 - 179
Target Start/End: Complemental strand, 23725346 - 23725299
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaagaa 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23725346 caatagggctacaacagcaatattcaaaatttgatacataggaaagaa 23725299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 41800474 - 41800391
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | |||||||||||||||||||||||||||||||    
T  41800474 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaataaaatcccatcccacgtatcagagcccta 41800391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 42700880 - 42700963
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | |||||||||||||||||||||||||||||||    
T  42700880 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaataaaatcccatcccacgtatcagagcccta 42700963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 51602595 - 51602512
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | |||||||||||||||||||||||||||||||    
T  51602595 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaataaaatcccatcccacgtatcagagcccta 51602512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 51608476 - 51608393
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | |||||||||||||||||||||||||||||||    
T  51608476 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaataaaatcccatcccacgtatcagagcccta 51608393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 1651589 - 1651479
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    ||||||| |||| |||||  |||| ||||||||| || | |||||||||||||||| | |    |||||||  |||||||||||||||||||||| | ||    
T  1651589 ttcaacatcaatggggctttaacaacaatattcagaaatcgatacataggaaagaattgagcaaataaaatatcatcccacgtatcagagccctagacac 1651490  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  1651489 tttgagccacc 1651479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 61 - 234
Target Start/End: Original strand, 11846624 - 11846796
Alignment:
Q  61 aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaaca-atagggctacaacagcaatattcaaa 159  Q
    |||||||  ||||||||||||||||||||  | |||| ||||||||||||| | | | | || | |||||| | |||||||||||| | ||  || ||||    
T  11846624 aacaacattaaccgtttaaaactccataaa-atatctcggcataaaagcctcaaccagaaaaatccaacaaaacatagggctacaatatcatcatccaaa 11846722  T
Q  160 atttgatacataggaaagaaattaatcgataaaa-tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||| |||   || |  ||||| ||||||||||| ||||||||||||| | |||||||||||||    
T  11846723 atttgatacataggaatgaag--aaacattaaaaatcccatcccacatatcagagccctagacactttgagccacc 11846796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 103
Target Start/End: Original strand, 42219899 - 42219974
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcat 103  Q
    ||||| |||| |||||||||||||||||||||||||| ||||||  ||||||| ||||| ||  | ||||||||||    
T  42219899 catcaataatcttgcagcggaatatttgcatcaaacatcaacaattgtttaaacctccaaaataatatcttggcat 42219974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 20939935 - 20940011
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||| |||||||||||||| |||||||| | ||||  ||||||||||| ||||||||||||| | |||||||||||||    
T  20939935 caaaaattgatacataggaa-gaaattaaacaataag-tcccatcccacatatcagagccctagacactttgagccacc 20940011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 41 - 144
Target Start/End: Original strand, 40908144 - 40908248
Alignment:
Q  41 gcagcggaatatttgcatcaaac-aacaacaaccgtttaaaac-tccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagg 138  Q
    |||||||||||||  |||||||  ||||||||| ||||||||| ||||||| ||||||||||||||||||||| | || || || | ||||||  |||||    
T  40908144 gcagcggaatattctcatcaaattaacaacaactgtttaaaacctccataa-taaatcttggcataaaagcctaaacatcagaaatccaacaaacatagg 40908242  T
Q  139 gctaca 144  Q
    ||||||    
T  40908243 gctaca 40908248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 29 - 149
Target Start/End: Complemental strand, 43286506 - 43286381
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaacaaca----acaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacat-aag 123  Q
    |||||||| | ||||||||||||||  |||||| |||||    | ||| |||| |||||||| ||  || ||||||||||||||||||| || ||| ||     
T  43286506 atcattaaatctgcagcggaatattctcatcaatcaacagttcataactgttttaaactccaaaataaattcttggcataaaagccttaacatcataaaa 43286407  T
Q  124 ttcaacaacaatagggctacaacagc 149  Q
    | ||||| ||||||||||||||||||    
T  43286406 tccaacatcaatagggctacaacagc 43286381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 636264 - 636188
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||| |||||||||||| | |||||||| | ||||| ||||||||||||||| |||| |||| | |||||||||||||    
T  636264 caaaaattgatacataggta-gaaattaaactataaa-tcccatcccacgtattagagtcctagacactttgagccacc 636188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Original strand, 390691 - 390720
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaaa 220  Q
    ||||||||||||||||||||||||||||||    
T  390691 aaatcccatcccacgtatcagagccctaaa 390720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 899082 - 899162
Alignment:
Q  41 gcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    |||||||||||||  ||||||||| ||||||  ||||||| ||||| ||  | |||||||||| ||||||||| ||||||||    
T  899082 gcagcggaatattatcatcaaacatcaacaattgtttaaacctccaaaataatatcttggcat-aaagccttaacaacataa 899162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 179
Target Start/End: Complemental strand, 2707465 - 2707380
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaa 179  Q
    ||||||||||| |||| | |||||||||  |||||  || | ||||||||| ||||||||||  ||| ||||||||||||||||||    
T  2707465 tcttggcataagagccatttcaacataaaattcaatcaccaaagggctacatcagcaatatttcaaaattgatacataggaaagaa 2707380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 30 - 122
Target Start/End: Complemental strand, 11171883 - 11171788
Alignment:
Q  30 tcattaattttgcagcggaatatttgcatcaaacaacaac---aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||| | ||||||||||||||  ||||||||||||||   ||| |||| || ||||||||  || ||||||||| ||||||||| || |||||    
T  11171883 tcattaaatctgcagcggaatattctcatcaaacaacaacaataactgttttaacctccataataaattcttggcatgaaagccttaacatcataa 11171788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 326304 - 326525
Alignment:
Q  18 cattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcctta 113  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||    |||||||||  ||||||| |||||||| |||||||||||||||||||||||    
T  326304 cattcaaaatcttcattaactttgcagcggaatatttgcatcaaaacatcaacaacaattgtttaaacctccataattaaatcttggcataaaagcctta 326403  T
Q  114 tcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgat-aaaatcccatcccacgtatcaga 212  Q
    ||||||||| ||||||||| ||||||||||| ||||| ||| ||||||||||||||||||||||||  ||| |  | ||||||||||| |||||||||||    
T  326404 tcaacataaattcaacaactatagggctacatcagcattatccaaaatttgatacataggaaagaaggtaagcattaaaaatcccatcgcacgtatcaga 326503  T
Q  213 gccctaaaaactttgagccacc 234  Q
    |||||| | |||||||||||||    
T  326504 gccctagacactttgagccacc 326525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 18 - 234
Target Start/End: Original strand, 320595 - 320816
Alignment:
Q  18 cattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcctta 113  Q
    ||||||| ||| ||||||| |||||||||||||||||||||||||    |||||||||  ||||||| |||||||| ||| |||||||||||||||||||    
T  320595 cattcaaaatcttcattaactttgcagcggaatatttgcatcaaaacatcaacaacaattgtttaaacctccataattaactcttggcataaaagcctta 320694  T
Q  114 tcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgat-aaaatcccatcccacgtatcaga 212  Q
    ||||||||| ||||||||| ||||||||| | ||||| ||| ||||||||||||||||| ||| ||  ||| |  | |||||||||||||||||||||||    
T  320695 tcaacataaattcaacaactatagggctaaatcagcattatccaaaatttgatacatagaaaataatgtaagcattaaaaatcccatcccacgtatcaga 320794  T
Q  213 gccctaaaaactttgagccacc 234  Q
    |||||| | |||||||||||||    
T  320795 gccctagacactttgagccacc 320816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 2e-57; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 6728909 - 6728683
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||    |||||||||| ||||||| |||||||| ||||||||||||||||||     
T  6728909 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaagt 6728810  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattc---aaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgt 206  Q
    ||||||||||||| ||||||||| ||||||||||| |||||||||||   |||| |||||||||||||| |||  ||| |  ||||||| ||||||||||    
T  6728809 cttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaaaaattgatacataggaatgaaggtaa-cattaaaatctcatcccacgt 6728711  T
Q  207 atcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||||||||    
T  6728710 atcagagccctagacactttgagccacc 6728683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 19075496 - 19075704
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| ||||  |||||| |||||||| ||||||||||||||||||||    
T  19075496 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 19075594  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtat 208  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||    
T  19075595 ttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtat 19075694  T
Q  209 cagagcccta 218  Q
    ||||||||||    
T  19075695 cagagcccta 19075704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 15 - 218
Target Start/End: Complemental strand, 31253682 - 31253474
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||||||||  |||||| |||| ||| ||||||||||||||||||||    
T  31253682 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacaacaactatttaaatctccgtaattaaatcttggcataaaagcc 31253584  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtat 208  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||    
T  31253583 ttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtat 31253484  T
Q  209 cagagcccta 218  Q
    ||||||||||    
T  31253483 cagagcccta 31253474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 26 - 175
Target Start/End: Complemental strand, 22008530 - 22008377
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacata 121  Q
    |||||||||||||||||||||||| ||||||||||||    |||||||||| ||||||| |||||||| ||||||||||||| |||||||||||||||||    
T  22008530 atcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcatgaaagccttatcaacata 22008431  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaa 175  Q
    | ||||||||  ||||||||||| ||||||||||||||| ||||||||||||||    
T  22008430 aattcaacaatcatagggctacatcagcaatattcaaaaattgatacataggaa 22008377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 29326356 - 29326143
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||||||||| |||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  29326356 tcatcattaaatttgcagcggaaaatttgcatcaaaacaacaacagcaacagtttaaatctccataattaaatctttggcataaaagccttatcaacata 29326257  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaa 219  Q
    | ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||||||||||||     
T  29326256 aattcaacaaccatagggctacgtcagcaatattcaaaa-ttgatacataggaatgaaaaacaataagaaaatcccatcccatacgtatcagagccctag 29326158  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  29326157 acactttgagccacc 29326143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 219
Target Start/End: Complemental strand, 33474547 - 33474336
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| |||||  |||||||||||||| |||||||| ||||||||||||    ||||| |||| ||||||| |||||||| ||||||||||||||||| |    
T  33474547 acatccttcaaagtcatcattaattttacagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaaac 33474448  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgta 207  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||| |||||| ||||||| ||||   |   | |||||||||||||  |||||    
T  33474447 cttatcaacataaattcaacaaccatagggctacgtcagcaatattcaaaaattgatatataggaatgaaaaacaataagaaaatcccatcccgtacgta 33474348  T
Q  208 tcagagccctaa 219  Q
    ||||||||||||    
T  33474347 tcagagccctaa 33474336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 234
Target Start/End: Complemental strand, 43244362 - 43244187
Alignment:
Q  61 aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaa 160  Q
    ||||||| |||| ||||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||||||||||    
T  43244362 aacaacagcaactgtttaaatctccataattaaatcttggcataaaagccttatcaacataaattcaacaaccatagggctacgtcagcaatattcaaaa 43244263  T
Q  161 tttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaaaaactttgagccacc 234  Q
     |||||||||||||| ||||   |   | |||||| ||||||  |||||||||||||||| | |||||||||||||    
T  43244262 cttgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcagagccctagacactttgagccacc 43244187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 24669567 - 24669465
Alignment:
Q  133 aatagggctacaacagcaatattcaaaatttgatacatagg-aaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcc 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| || | ||||||||||    
T  24669567 aatagggctacaacagcaatattcaaaatttgatacataggaaaagaaattaagcaataaaatcccatcccacgtatcagagccgtagacactttgagcc 24669468  T
Q  232 acc 234  Q
    |||    
T  24669467 acc 24669465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 24739336 - 24739234
Alignment:
Q  133 aatagggctacaacagcaatattcaaaatttgatacatagg-aaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcc 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||| || | ||||||||||    
T  24739336 aatagggctacaacagcaatattcaaaatttgatacataggaaaagaaattaagcaataaaatcccatcccacgtatcagagccgtagacactttgagcc 24739237  T
Q  232 acc 234  Q
    |||    
T  24739236 acc 24739234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 24752105 - 24752003
Alignment:
Q  133 aatagggctacaacagcaatattcaaaatttgatacatagg-aaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcc 231  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||| |||||||||| || | ||||||||||    
T  24752105 aatagggctacaacagcaatattcaaaatttgatacataggaaaagaaattaagcaataaaatcccatcccacntatcagagccgtagacactttgagcc 24752006  T
Q  232 acc 234  Q
    |||    
T  24752005 acc 24752003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 22509695 - 22509593
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcc 231  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| | ||   |||||||| |||||||||||||||||| ||| | ||||||||||    
T  22509695 caatagggctacaacagcaatattcaaaatttgatacataggaaagaattaaacacataaaatctcatcccacgtatcagagcgctagacactttgagcc 22509596  T
Q  232 acc 234  Q
    |||    
T  22509595 acc 22509593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 22759857 - 22759636
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatc-----aaacaacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||      ||||||| |||| ||||||| |||| ||| ||||||||||||| ||||    
T  22759857 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcgagaacaacaacagcaactgtttaaatctccgtaattaaatcttggcat-aaag 22759759  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtat 208  Q
    ||||| |||||||| |||||| |   |||||| |||||| |||  | ||||||  |||||||||||||||||  |||  |  || || ||||||||||||    
T  22759758 ccttaacaacataa-ttcaaccaacttagggccacaacatcaagttccaaaataagatacataggaaagaaaacaat--aataattctcatcccacgtat 22759662  T
Q  209 cagagccctaaaaactttgagccacc 234  Q
    |||||||||| | |||||||||||||    
T  22759661 cagagccctagacactttgagccacc 22759636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 34828640 - 34828741
Alignment:
Q  134 atagggctacaacagcaatatt-caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    |||||||||||||| ||||||| ||||| |||||||||| |||||||||||| | | ||||||||||||||||||||||||||||| | |||||||||||    
T  34828640 atagggctacaacaacaatatttcaaaaattgatacataagaaagaaattaagcaacaaaatcccatcccacgtatcagagccctagacactttgagcca 34828739  T
Q  233 cc 234  Q
    ||    
T  34828740 cc 34828741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 22440298 - 22440159
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaat 194  Q
    ||||||||||||||||| | | | | || | ||||||  ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||     |||||    
T  22440298 tcttggcataaaagcctcaaccagaaaaatccaacaatcatagggctacaacagcattatccaaaatttgatacataggaatgaaagaaacattaaaaat 22440199  T
Q  195 cccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||||| |||||||||||||    
T  22440198 cccatcccacgtatcagagccctaaacactttgagccacc 22440159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 22233277 - 22233080
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||||||||||||||||||||||| |||     |||| ||||| ||||||  |||| |||  |||||||||||||||||||| | | ||||||    
T  22233277 catcattaattttgcagcggaatatttgcattaaaaaccacaacgacaactgtttaattctccctaa--aaatcttggcataaaagcctcaacgacataa 22233180  T
Q  123 gttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
     |||||||||  ||||||||||||||| |||  | ||||||||||| |||||||| ||||  || |  ||||||||||||||  || |||||||||||||    
T  22233179 attcaacaaccaaatagggctacaacatcaagttccaaaatttgatgcataggaatgaaaggaaacattaaaatcccatcccgtacatatcagagcccta 22233080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 86 - 175
Target Start/End: Complemental strand, 108 - 19
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaa 175  Q
    |||| ||||||||||  ||||||||||| |||||||| ||||||||| ||||||||||| || |||||||||||||||||||||||||||    
T  108 ataattaaatcttggtgtaaaagccttaacaacataaattcaacaaccatagggctacatcaacaatattcaaaatttgatacataggaa 19  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 19235423 - 19235563
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    |||||||||||||||| | |||| ||||  |||||  || | ||||||||| ||||||||||  ||| |||||||||||||||||| | || | ||||||    
T  19235423 tcttggcataaaagccatttcaatataaaattcaatcaccaaagggctacatcagcaatatttcaaaattgatacataggaaagaattcaaacaataaaa 19235522  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | ||| |||||||||    
T  19235523 tcccatcccacgtatcagagccctagacactgtgagccacc 19235563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 175
Target Start/End: Complemental strand, 22237841 - 22237689
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||||||||||||||||||||||| |||     |||| ||||| ||||||  |||| |||  |||||||||||||||||||| | | ||||||    
T  22237841 catcattaattttgcagcggaatatttgcattaaaaaccacaacgacaactgtttaattctccttaa--aaatcttggcataaaagcctcaacgacataa 22237744  T
Q  123 gttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaa 175  Q
     |||||||||  ||||||||||||||| |||  | ||||||||||||||||||||    
T  22237743 attcaacaaccaaatagggctacaacatcaagttccaaaatttgatacataggaa 22237689  T

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Target: chr5; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 43120274 - 43120435
Alignment:
Q  74 gtttaaaactccataactaaatctt-ggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    ||||||| |||||||| || ||||| |||||||| ||||||||||||||| ||||||||| || |||||||  ||||||||||| |||||||||||||||    
T  43120274 gtttaaatctccataattagatctttggcataaa-gccttatcaacataaattcaacaaccatggggctacgtcagcaatattc-aaatttgatacatag 43120371  T
Q  173 gaaag-aaattaatcgataaaatcccatccc--acgtatcagagccctaaaaactttgagccacc 234  Q
    ||| | ||| ||||  |  ||||||||||||  |||||||||||||||| | |||||||||||||    
T  43120372 gaatgaaaaataat-aaggaaatcccatcccgtacgtatcagagccctagacactttgagccacc 43120435  T

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Target: chr5; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 22466302 - 22466442
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||||| |||| | |||||||||  |||||  || | ||||||||| ||||||||||  ||| |||||||||||||||||| | || | ||||||    
T  22466302 tcttggcataagagccatttcaacataaaattcaatcaccaaagggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaaa 22466401  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||  | ||| |||||||||    
T  22466402 tcccatcccacgtatcagagccctggacactgtgagccacc 22466442  T

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Target: chr5; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 43123807 - 43123968
Alignment:
Q  74 gtttaaaactccataactaaatctt-ggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    ||||||| |||||||| || ||||| |||||||| ||||||||||||||| ||||||||| || |||||||  ||||||||||| |||||||||||||||    
T  43123807 gtttaaatctccataattagatctttggcataaa-gccttatcaacataaattcaacaaccatggggctacgtcagcaatattc-aaatttgatacatag 43123904  T
Q  173 gaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaaaaactttgagccacc 234  Q
    ||| ||||   |   |  ||||||||||||  |||||||||||||||| | |||||||||||||    
T  43123905 gaatgaaaaacaataaggaaatcccatcccgtacgtatcagagccctagacactttgagccacc 43123968  T

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Target: chr5; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 22459720 - 22459818
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||| | || | ||||||||||||||||||||||||||||||  | ||| |||||||||    
T  22459720 agggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaaatcccatcccacgtatcagagccctggacactgtgagccacc 22459818  T

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Target: chr5; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 20771489 - 20771629
Alignment:
Q  95 tcttggcataaaagccttatcaacataagt-tcaacaacaatagggctacaacagcaata-ttcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    |||||||||||||||| | |||||||||   ||||  || | ||||||||| ||| |||| ||||||||| |||||||||||||||| | ||   |||||    
T  20771489 tcttggcataaaagccatttcaacataaaagtcaatcaccaaagggctacatcagtaataattcaaaatt-gatacataggaaagaattcaagtaataaa 20771587  T
Q  193 atcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||||| | ||| |||||||||    
T  20771588 atcccatcccacgtatcagagccctagacactgtgagccacc 20771629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 20780264 - 20780404
Alignment:
Q  95 tcttggcataaaagccttatcaacataagt-tcaacaacaatagggctacaacagcaata-ttcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    |||||||||||||||| | |||||||||   ||||  || | ||||||||| ||| |||| ||||||||| |||||||||||||||| | ||   |||||    
T  20780264 tcttggcataaaagccatttcaacataaaagtcaatcaccaaagggctacatcagtaataattcaaaatt-gatacataggaaagaattcaagtaataaa 20780362  T
Q  193 atcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||||| | ||| |||||||||    
T  20780363 atcccatcccacgtatcagagccctagacactgtgagccacc 20780404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 218
Target Start/End: Original strand, 21661889 - 21662088
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatc-aacataa 122  Q
    ||||||||||| ||||||||||||||||||||     |||||||||||| ||||||  |||||||| | ||||||||||||||||||| ||| || ||||    
T  21661889 atcattaattt-gcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaat-aatcttggcataaaagcctcatcaaaaataa 21661986  T
Q  123 gttcaacaac--aat--agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccc 216  Q
     | |||||||  |||  |||| |||| ||||||  | ||||| |||||||||||||| |||| |||   || ||||||||||||  ||||||||||||||    
T  21661987 atccaacaaccaaataaagggttacatcagcaagttccaaaaattgatacataggaatgaaaataagtaattaaatcccatcccgtacgtatcagagccc 21662086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 21676204 - 21676014
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| | || |||||||||||||  ||||||| || ||||||| ||||||| ||||| ||  | ||||||||||||| |||||| |||||||| |    
T  21676204 atcatcatttaattagcagcggaatattatcatcaaaacatcaacaactgtttaaacctccaaaataatatcttggcataaa-gccttaacaacataa-t 21676107  T
Q  125 tcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata--aaatcccatcccacgtatcagagcccta 218  Q
    ||||| |  ||||||| |||||| |||  | ||||||  ||||||||||||||||   || | |||  || |||||||||||||||||||||||||    
T  21676106 tcaaccaacatagggccacaacatcaagttccaaaataagatacataggaaagaa---aaacaataataattcccatcccacgtatcagagcccta 21676014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 24931422 - 24931324
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||| ||||||  ||| |||||||||||||||||| | || | |||||||||||||||| ||||||||||| || | ||| |||||||||    
T  24931422 agggctacatcagtaatatttcaaaattgatacataggaaagaattcaagcaataaaatcccatcccatgtatcagagccttagacactgtgagccacc 24931324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 23527079 - 23527182
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| || ||  ||||||||||||||||| || ||||  || | |||||||| |||||||||||||||||||||| | ||    
T  23527079 ttcatcaaccatagggctacaacaacattaaccaaaatttgatacatag-aatgaaagaaaacaataaaatctcatcccacgtatcagagccctagacac 23527177  T
Q  224 tttga 228  Q
    |||||    
T  23527178 tttga 23527182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 21678766 - 21678690
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||| | |||||||| | ||||| |||||||||||||||||||| |||| | |||||||||||||    
T  21678766 caaaatttgatacataggta-gaaattaaactataaa-tcccatcccacgtatcagagtcctagacactttgagccacc 21678690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 28890899 - 28890835
Alignment:
Q  153 attcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||||||||||||| | ||   |||||||||||||||||||||||||||||||    
T  28890899 attcaaaatt-gatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 28890835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 28910803 - 28910739
Alignment:
Q  153 attcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||||||||||||| | ||   |||||||||||||||||||||||||||||||    
T  28910803 attcaaaatt-gatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 28910739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 28926071 - 28926007
Alignment:
Q  153 attcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||||||||||||| | ||   |||||||||||||||||||||||||||||||    
T  28926071 attcaaaatt-gatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 28926007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 28932494 - 28932430
Alignment:
Q  153 attcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||||||||||||| | ||   |||||||||||||||||||||||||||||||    
T  28932494 attcaaaatt-gatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 28932430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 28947198 - 28947134
Alignment:
Q  153 attcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||||||||||||| | ||   |||||||||||||||||||||||||||||||    
T  28947198 attcaaaatt-gatacataggaaagaattcaaataataaaatcccatcccacgtatcagagcccta 28947134  T

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Target: chr5; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 20831359 - 20831454
Alignment:
Q  140 ctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgat-aaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||| ||||||||| |||||||||||||| | |||||||  ||| |  | |||||| |||||||||||| ||||||||| | |||||||||||||    
T  20831359 ctacatcagcaatatccaaaatttgatacacaagaaagaaggtaagcattaaaaatctcatcccacgtattagagccctagacactttgagccacc 20831454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 17265295 - 17265219
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||| |||||||||||| | |||||||| | ||||| |||||||||||||||||||| |||| | |||||||||||||    
T  17265295 caaaaattgatacataggta-gaaattaaactataaa-tcccatcccacgtatcagagtcctagacactttgagccacc 17265219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 17271777 - 17271701
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||| |||||||||||| | |||||||| | ||||| |||||||||||||||||||| |||| | |||||||||||||    
T  17271777 caaaaattgatacataggta-gaaattaaactataaa-tcccatcccacgtatcagagtcctagacactttgagccacc 17271701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 18409674 - 18409531
Alignment:
Q  36 attttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaaca 130  Q
    |||||||||||||||||||||||||||     |||||| ||||||||||  |||||| |  | |||||||||||||||||| ||||| |||| | |||||    
T  18409674 attttgcagcggaatatttgcatcaaaaacaacaacaataaccgtttaattctccatgaa-atatcttggcataaaagcctcatcaaaataattccaaca 18409576  T
Q  131 a-ca---atagggctacaacagcaatattcaaaatttgatacata 171  Q
    | ||   ||||||||||| ||||||  | ||||| ||||||||||    
T  18409575 atcaagcatagggctacatcagcaagttccaaaaattgatacata 18409531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 20818767 - 20818831
Alignment:
Q  153 attcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||||||||||||| | ||   |||||| ||||||||||||||||||||||||    
T  20818767 attcaaaatt-gatacataggaaagaattcaaataataaaaccccatcccacgtatcagagcccta 20818831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 20825867 - 20825931
Alignment:
Q  153 attcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||||||||||||| | ||   |||||| ||||||||||||||||||||||||    
T  20825867 attcaaaatt-gatacataggaaagaattcaaataataaaaccccatcccacgtatcagagcccta 20825931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 28897603 - 28897539
Alignment:
Q  153 attcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||||||||||||| | ||   |||||||||||||||| ||||||||||||||    
T  28897603 attcaaaatt-gatacataggaaagaattcaaataataaaatcccatcccatgtatcagagcccta 28897539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 153 - 218
Target Start/End: Complemental strand, 28933998 - 28933934
Alignment:
Q  153 attcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||||||||||||| | ||   |||||||||||||||| ||||||||||||||    
T  28933998 attcaaaatt-gatacataggaaagaattcaaataataaaatcccatcccatgtatcagagcccta 28933934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 191 - 234
Target Start/End: Original strand, 22174723 - 22174766
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||| |||| | |||||||||||||    
T  22174723 aaatcccatcccacgtatcagagtcctagacactttgagccacc 22174766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 106
Target Start/End: Complemental strand, 28260557 - 28260490
Alignment:
Q  39 ttgcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaa 106  Q
    |||||||||| ||||  ||||||||| ||||||  ||||||||||||| ||| | |||||||||||||    
T  28260557 ttgcagcggattattatcatcaaacatcaacaattgtttaaaactccaaaacaatatcttggcataaa 28260490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 1858169 - 1858092
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  1858169 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 1858092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 23076985 - 23076947
Alignment:
Q  34 taattttgcagcggaatatttgcatcaaacaacaacaac 72  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  23076985 taattatgcagcggaatatttgcattaaacaacaacaac 23076947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 72
Target Start/End: Complemental strand, 23082432 - 23082394
Alignment:
Q  34 taattttgcagcggaatatttgcatcaaacaacaacaac 72  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  23082432 taattatgcagcggaatatttgcattaaacaacaacaac 23082394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Complemental strand, 5582819 - 5582790
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaaa 220  Q
    ||||||||||||||||||||||||||||||    
T  5582819 aaatcccatcccacgtatcagagccctaaa 5582790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 28 - 234
Target Start/End: Complemental strand, 14946472 - 14946264
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag 123  Q
    |||||||||||||||||||||| ||||||||||||    |||||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||     
T  14946472 catcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctcaataattaaatcttggcataaaagccttatcaacataaa 14946373  T
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    | ||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  |||   || |||||||||||||||||||||||||||| | ||    
T  14946372 tccaacaaccatagggctacatcagcaatattcaaaaattgatacataggaataaaggtaa--cattaaatcccatcccacgtatcagagccctagacac 14946275  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  14946274 tttgagccacc 14946264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 28 - 234
Target Start/End: Complemental strand, 15374065 - 15373857
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag 123  Q
    |||||||||||||||||||||| ||||||||||||    |||||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||||     
T  15374065 catcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctcaataattaaatcttggcataaaagccttatcaacataaa 15373966  T
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    | ||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  |||   || |||||||||||||||||||||||||||| | ||    
T  15373965 tccaacaaccatagggctacatcagcaatattcaaaaattgatacataggaataaaggtaa--cattaaatcccatcccacgtatcagagccctagacac 15373868  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  15373867 tttgagccacc 15373857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 1612214 - 1612375
Alignment:
Q  74 gtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    |||| |||||||||||  || ||||||||| ||||||||| || |||||  || |||| |||||||||||||||||||||||||||||||||||||||||    
T  1612214 gttttaaactccataataaattcttggcatgaaagccttaacatcataaaatccaacatcaatagggctacaacagcaatattcaaaatttgatacatag 1612313  T
Q  173 gaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||| |||||||||||||||||||||| | |||||||||||||    
T  1612314 gaaagaaattaagcaataaaatctcatcccacgtatcagagccctagacactttgagccacc 1612375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 29 - 234
Target Start/End: Original strand, 19599386 - 19599596
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaacaacaac----aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    |||||||| | ||||||||||||||  || ||||||||||     ||| |||| |||||||||||  || ||||||||||||||||||| || |||||      
T  19599386 atcattaaatctgcagcggaatattatcaccaaacaacaattcataactgttttaaactccataataaattcttggcataaaagccttaacatcataaaa 19599485  T
Q  125 tc-aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    || |||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | |  |||||||||||||||||||||||||||| | ||    
T  19599486 tccaacatcagtagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaacaaataaatcccatcccacgtatcagagccctagacac 19599585  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  19599586 tttgagccacc 19599596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 20 - 180
Target Start/End: Complemental strand, 10308647 - 10308483
Alignment:
Q  20 ttcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatc 115  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||    ||||| |||| |||||||  ||||||| |||||||||||||||||||||||||    
T  10308647 ttcaaaatcatcattaattttgcagcagaaaatttgcatcaaaacaacaacagcaactgtttaaatatccataattaaatcttggcataaaagccttatc 10308548  T
Q  116 aacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    ||||||| ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||    
T  10308547 aacataaattcaacaaccatagggctacgtcagcaatattcaaaacttgatacataggaatgaaa 10308483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 4992496 - 4992709
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||||||||| |||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  4992496 tcatcattaaatttgcagcggaaaatttgcatcaaaacaacaacagcaacagtttaaatctccataattaaatctttggcataaaagccttatcaacata 4992595  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaa 219  Q
    | ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||||||||||||     
T  4992596 aattcaacaaccatagggctacgtcagcaatattcaaaa-ttgatacataggaatgaaaaacaataagaaaatcccatcccatacgtatcagagccctag 4992694  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  4992695 acactttgagccacc 4992709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 16185122 - 16185348
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| || ||||||||||||||||||||  ||||||||||||    ||||| |||| ||||||| |||||||| ||||||||||||||||| |    
T  16185122 acatccttcaaaattatcattaattttgcagcggataatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaaac 16185221  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgta 207  Q
    ||||||||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||| |||||| ||||   |   | |||||||||||||  ||||     
T  16185222 cttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacttaggaatgaaaaacaataagaaaatcccatcccgtacgtc 16185321  T
Q  208 tcagagccctaaaaactttgagccacc 234  Q
    ||||||| ||| | |||||||||||||    
T  16185322 tcagagctctagacactttgagccacc 16185348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 15 - 218
Target Start/End: Complemental strand, 11395350 - 11395142
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| ||||  |||||| |||||||| |||||||||||||||||||     
T  11395350 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagct 11395252  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtat 208  Q
    |||||||||||| ||||||||| ||||||||||| ||| ||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||    
T  11395251 ttatcaacataaattcaacaaccatagggctacatcagtaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtat 11395152  T
Q  209 cagagcccta 218  Q
    ||||||||||    
T  11395151 cagagcccta 11395142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 4988398 - 4988611
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||||||||| |||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  4988398 tcatcattaaatttgcagcggaaaatttgcatcaaaacaacaacagcaacagtttaaatctccataattaaatctttggcataaaagccttatcaacata 4988497  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaa 219  Q
    | ||||||||| |||| |||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||||||||||||     
T  4988498 aattcaacaaccatagtgctacgtcagcaatattcaaaa-ttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtatcagagccctag 4988596  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  4988597 acactttgagccacc 4988611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 35963265 - 35963163
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcc 231  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | ||||||||||    
T  35963265 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaagcgataaaatctcatcccacgtatcagagccctagacactttgagcc 35963166  T
Q  232 acc 234  Q
    |||    
T  35963165 acc 35963163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 20 - 141
Target Start/End: Original strand, 38827218 - 38827343
Alignment:
Q  20 ttcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatc 115  Q
    ||||| |||||||||||||||||||| ||| ||||||||||||    |||||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  38827218 ttcaaaatcatcattaattttgcagctgaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaagccttatc 38827317  T
Q  116 aacataagttcaacaacaatagggct 141  Q
    ||||||| ||||||||| ||||||||    
T  38827318 aacataaattcaacaaccatagggct 38827343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 15338475 - 15338578
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaatt-aatcgataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||| |||||||||||||||||||||| | |||||||||    
T  15338475 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaatacataaaatctcatcccacgtatcagagccctagacactttgagc 15338574  T
Q  231 cacc 234  Q
    ||||    
T  15338575 cacc 15338578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 15723743 - 15723640
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatc-gataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||| |||||||||||||||| | |||||||||    
T  15723743 caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaacacataaaatcccatcctacgtatcagagccctagacactttgagc 15723644  T
Q  231 cacc 234  Q
    ||||    
T  15723643 cacc 15723640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 11220680 - 11220534
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat 185  Q
    |||| ||||||||||||||||||||||| || ||||| ||||||||| |||||||||||  |||||||||||||| ||||||||||||||  ||  |||     
T  11220680 ataattaaatcttggcataaaagccttaacatcataaattcaacaaccatagggctacataagcaatattcaaaaattgatacataggaataaaggtaa- 11220582  T
Q  186 cgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
      || |||||||||||||||||||||||||||| | |||||||||||||    
T  11220581 -cattaaatcccatcccacgtatcagagccctagacactttgagccacc 11220534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 15711514 - 15711415
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatc-gataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||| | |||||||||||||    
T  15711514 agggctacaacaccaatattcaaaatttgatacataggaaagaaattaaacacataaaatcccatcccacgtatcagagccctagacactttgagccacc 15711415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 46349409 - 46349196
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||||     |||| ||||  ||||||  |||||||| ||||||||||||||||||    
T  46349409 acatctttcaaaatcatcattaattt-gcagcggaatatttgcatcaaaagcaacaacgacaattgtttaattctccataaataaatcttggcataaaag 46349311  T
Q  109 ccttatcaacataagttcaacaa-caat--agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--a 203  Q
    ||| |||||||||| |||||||| ||||  ||||||||| ||  ||  |||||||||||||||||||||| |||| ||| |  | ||||| ||||||  |    
T  46349310 cctcatcaacataaattcaacaaccaataaagggctacatcattaagtttcaaaatttgatacataggaatgaaaataagcagttaaatctcatcccgta 46349211  T
Q  204 cgtatcagagcccta 218  Q
    |||||||||||||||    
T  46349210 cgtatcagagcccta 46349196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 139 - 234
Target Start/End: Original strand, 6411482 - 6411577
Alignment:
Q  139 gctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||| | |||||||| |||||||||||||||||||||| | |||||||||||||    
T  6411482 gctacaacatcaatattcaaaatttgatacataggaaagaagttaagcaataaaatctcatcccacgtatcagagccctagacactttgagccacc 6411577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 36306638 - 36306531
Alignment:
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaacttt 226  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||||||||| |||| | |||||||| ||||| |||||||||||||||| | |||||    
T  36306638 aacatcaatagggctacaacatcaatattcaaaacttgatacataggaaagaagttaagcaataaaatcgcatcctacgtatcagagccctagacacttt 36306539  T
Q  227 gagccacc 234  Q
    ||||||||    
T  36306538 gagccacc 36306531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 125255 - 125031
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaag 108  Q
    ||||| |||||| |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||||| |||||| | |    
T  125255 acatccttcaag-tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatctttggcataga-g 125158  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgt 206  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||   |   | |||||||||||||  ||||    
T  125157 ccttatcaacataaattcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgt 125059  T
Q  207 atcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||||||||    
T  125058 atcagagccctagacactttgagccacc 125031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 14321128 - 14321028
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    |||||||||||||| |||||||  ||| ||||||||||||||||||||||| | || |||||||||||||||||||||||||||| | ||||||||||||    
T  14321128 atagggctacaacaacaatatttcaaaattgatacataggaaagaaattaaacaatgaaatcccatcccacgtatcagagccctagacactttgagccac 14321029  T
Q  234 c 234  Q
    |    
T  14321028 c 14321028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 21744368 - 21744207
Alignment:
Q  74 gtttaaaactccataactaaatctt-ggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    ||||||| |||||||| |||||||| |||||||| ||||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||    
T  21744368 gtttaaatctccataattaaatctttggcataaa-gccttatcaacataaattcaacaaccatagggctacgtcagcaatattc-aaatttgatacatag 21744271  T
Q  173 gaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaaaaactttgagccacc 234  Q
    ||| ||||   |   | |||||||||||||  |||||||||||||||| | |||||||||||||    
T  21744270 gaatgaaaaacaataagaaaatcccatcccgtacgtatcagagccctagacactttgagccacc 21744207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 12711434 - 12711336
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||  || | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  12711434 agggctacaacagcattatccaaaatttgatacataggaatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 12711336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 13124504 - 13124406
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||  || | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  13124504 agggctacaacagcattatccaaaatttgatacataggaatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 13124406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 29 - 218
Target Start/End: Complemental strand, 3290419 - 3290223
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag 123  Q
    ||||||||||| |||||||||||||||||| |||     ||||||||||||||||   |||||||| |||||||||||||||||| || | ||||||||     
T  3290419 atcattaattt-gcagcggaatatttgcattaaaagcatcaacaacaaccgtttagttctccataa-taaatcttggcataaaagtctcaacaacataaa 3290322  T
Q  124 ttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
    |||||||||  || |||||||||||| |||  | |||||||||||||||||||| |||| ||  |  |||||||||||| |  ||||||||||||||||    
T  3290321 ttcaacaaccaaaaagggctacaacatcaagttccaaaatttgatacataggaatgaaagtacacattaaaatcccatctcgtacgtatcagagcccta 3290223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 11395687 - 11395548
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaat 194  Q
    ||||||||||||||||| |||||   || | ||| ||  ||||||||||||||||| |||||||||||||||||||||||| ||||  ||     |||||    
T  11395687 tcttggcataaaagcctcatcaagcgaaatccaataaacatagggctacaacagcattattcaaaatttgatacataggaatgaaagaaacattaaaaat 11395588  T
Q  195 cccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    | |||||||||||||||||||||| | |||||||||||||    
T  11395587 ctcatcccacgtatcagagccctagacactttgagccacc 11395548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 218
Target Start/End: Complemental strand, 10306074 - 10305875
Alignment:
Q  20 ttcaagatcatcattaattttgcagcggaatatttgcatca----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatc 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||    ||||||| |||| ||||||| ||||| ||  | |||||||||| ||||||||| |    
T  10306074 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacagcaactgtttaaacctccaaaataatatcttggcat-aaagccttaac 10305976  T
Q  116 aacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata--aaatcccatcccacgtatcagag 213  Q
    ||||||| |||||| |  ||||||| |||||| |||  | ||||||  ||||||||||||||||   || | |||  || ||||||||||||||||||||    
T  10305975 aacataa-ttcaaccaacatagggccacaacatcaagttccaaaataagatacataggaaagaa---aaacaataataattcccatcccacgtatcagag 10305880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 13742148 - 13742246
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| || ||| |||||||||||||||||||| ||||  || | ||||||| ||||||||||||||||||||||| | |||||||||||||    
T  13742148 agggctacaacaacattatccaaaatttgatacataggaatgaaagaaaacaataaaattccatcccacgtatcagagccctagacactttgagccacc 13742246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 27 - 218
Target Start/End: Original strand, 8775310 - 8775506
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||||| |||||| | ||||||||||||||    
T  8775310 tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatctttggcataga-gccttatcaacata 8775408  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
    | ||||||||| |||| |||||  ||||||||||| |||||||||||||||||| ||||   |   | |||||||||||||  ||||||||||||||||    
T  8775409 aattcaacaaccatagagctacgtcagcaatattc-aaatttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtatcagagcccta 8775506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 20 - 218
Target Start/End: Original strand, 10305454 - 10305653
Alignment:
Q  20 ttcaagatcatcattaattttgcagcggaatatttgcatc-aaacaacaac---aaccgtttaaaactccataactaaatcttggcataaaagccttatc 115  Q
    ||||| |||||||||||||||||||||||| ||||||||| ||||||||||   ||| ||||||| ||||| ||  | |||||||||| ||||||||| |    
T  10305454 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacagaaactgtttaaacctccaaaataatatcttggcat-aaagccttaac 10305552  T
Q  116 aacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata--aaatcccatcccacgtatcagag 213  Q
    ||||||| |||||| |  ||||||| |||||| |||  | ||||||  ||||||||||||||||   || | |||  || ||||||||||||||||||||    
T  10305553 aacataa-ttcaaccaacatagggccacaacatcaagttccaaaataagatacataggaaagaa---aaacaataataattcccatcccacgtatcagag 10305648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 20907962 - 20907821
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatatt-caaaatttgatacataggaaagaaattaatcgataaa 192  Q
    |||||||||||||||| | |||||||||  |||||  || | ||||||||| | |||||||| ||||| |||||||||||||||||| |  | | |||||    
T  20907962 tcttggcataaaagccgtttcaacataaaattcaatcaccaaagggctacatctgcaatatttcaaaaattgatacataggaaagaattcgagcaataaa 20907863  T
Q  193 atcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||||| | ||| |||||||||    
T  20907862 atcccatcccacgtatcagagccctagacactgtgagccacc 20907821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 11384411 - 11384272
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaat 194  Q
    ||||||||||||||||| |||||   || | ||| ||  ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||     |||||    
T  11384411 tcttggcataaaagcctcatcaagcgaaatccaataaacatagggctacaacagcattatccaaaatttgatacataggaatgaaagaaacattaaaaat 11384312  T
Q  195 cccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    | |||||||||||||||||||||| | |||||||||||||    
T  11384311 ctcatcccacgtatcagagccctagacactttgagccacc 11384272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 20328823 - 20328682
Alignment:
Q  92 aaatcttggcataaaagccttatcaacataagttcaacaa-caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata 190  Q
    |||| ||||||| ||||||| | |||||||| | |||||| ||||||||||||||||  ||  ||||||||||||||||||||||  |||  || |  ||    
T  20328823 aaattttggcattaaagcctcaacaacataa-tccaacaatcaatagggctacaacattaagtttcaaaatttgatacataggaataaaag-aagcatta 20328726  T
Q  191 aaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||| |||||||||||||||||||||||| |||||||||||||    
T  20328725 aaatctcatcccacgtatcagagccctaaacactttgagccacc 20328682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 2965422 - 2965520
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||| | || | |||||| |||||||||||||||||||||||| | ||| |||||||||    
T  2965422 agggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaaaccccatcccacgtatcagagccctagacactgtgagccacc 2965520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 124 - 234
Target Start/End: Original strand, 13005938 - 13006047
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| || ||  ||||||||||||||||| || ||||  || | ||||||||||||||||||||||||||||||| | ||    
T  13005938 ttcatcaaccatagggctacaacaacattaaccaaaatttgatacatag-aatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacac 13006036  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  13006037 tttgagccacc 13006047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 16089639 - 16089737
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||||||||||  |||  ||||||||||||||||| | || | ||||||||||||||||||||||||||||||| | ||| |||||||||    
T  16089639 agggctacatcagcaatatttcaaaaatgatacataggaaagaattcaagcaataaaatcccatcccacgtatcagagccctagacactgtgagccacc 16089737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 16675794 - 16675934
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcg-ataaaa 193  Q
    ||||||||||||||||| | | | | || | ||||||  |||||||||||||| || ||| |||||||||||||||||||| ||||  ||    | ||||    
T  16675794 tcttggcataaaagcctcaaccagaaaaatccaacaatcatagggctacaacaacattatccaaaatttgatacataggaatgaaagaaacattaaaaaa 16675893  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  16675894 tcccatcccacgtatcagagccctagatactttgagccacc 16675934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 17650031 - 17650171
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcg-ataaaa 193  Q
    ||||||||||||||||| | | | | || | ||||||  |||||||||||||| || ||| |||||||||||||||||||| ||||  ||    | ||||    
T  17650031 tcttggcataaaagcctcaaccagaaaaatccaacaatcatagggctacaacaacattatccaaaatttgatacataggaatgaaagaaacattaaaaaa 17650130  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  17650131 tcccatcccacgtatcagagccctagatactttgagccacc 17650171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 97 - 234
Target Start/End: Complemental strand, 21232606 - 21232470
Alignment:
Q  97 ttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaat 194  Q
    ||||||||||||||| | |||||||| ||||||||   |||||||||||| || |||  | |||||||| ||||||||||| |||| ||| |  ||||||    
T  21232606 ttggcataaaagcctcaacaacataa-ttcaacaatcaaatagggctaca-catcaagttccaaaatttaatacataggaatgaaagtaa-cattaaaat 21232510  T
Q  195 cccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  21232509 cccatcccacgtatcagagccctagacactttgagccacc 21232470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 232
Target Start/End: Original strand, 18605731 - 18605829
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    |||||||||||||| || ||| |||||||||||||||||||| ||||  ||     ||||||||||||||||||||||||||||| | |||||||||||    
T  18605731 atagggctacaacaacattatccaaaatttgatacataggaatgaaagaaacattaaaaatcccatcccacgtatcagagccctagacactttgagcca 18605829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 807520 - 807437
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | || ||||||||||||||||||||||||||||    
T  807520 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaatgaaatcccatcccacgtatcagagcccta 807437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 66 - 218
Target Start/End: Complemental strand, 12592236 - 12592086
Alignment:
Q  66 caacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttga 165  Q
    |||||||  |||||||||||| ||| | |||||||||||||||||| | | | |  | |||| |||   ||||||||||||| || ||  ||||||||||    
T  12592236 caacaactatttaaaactcca-aacaatatcttggcataaaagcctcaaccagaataattcatcaatcgtagggctacaacatcattaaccaaaatttga 12592138  T
Q  166 tacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    | ||||| || ||||| || | |||||||||||||||||||||||||||||||    
T  12592137 tgcatag-aatgaaataaaacaataaaatcccatcccacgtatcagagcccta 12592086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 23073867 - 23073950
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| |  ||  ||||||||||||||||| || ||| |||| | |||||||||||||||||||||||||||||||    
T  23073867 atagggctacaacaacgttaaccaaaatttgatacatag-aatgaatttaaacaataaaatcccatcccacgtatcagagcccta 23073950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 15438187 - 15438059
Alignment:
Q  92 aaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    ||||| |||||| |||| || ||||| |||| |  |||||| ||||||||||| |||||   | ||||| |||||||||||||| |||| ||| | |  |    
T  15438187 aaatcctggcatgaaagtctcatcaaaataattcaaacaacgatagggctacatcagcatgttccaaaaattgatacataggaatgaaaataaacaagta 15438088  T
Q  192 aatcccatccc--acgtatcagagcccta 218  Q
    |||||||||||  ||||||||||||||||    
T  15438087 aatcccatcccgtacgtatcagagcccta 15438059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 151
Target Start/End: Complemental strand, 18959150 - 18959021
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatca----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacata 121  Q
    ||||||||| |||| |||||||||||||  |||||    |||||||||||| ||||||  ||||||||    ||| |||||||||||||| ||||| |||    
T  18959150 atcatcatttatttagcagcggaatattctcatcaaaacaacaacaacaactgtttaattctccataaaattatcctggcataaaagcctcatcaa-ata 18959052  T
Q  122 agttc-aacaacaatagggctacaacagcaa 151  Q
    | ||| ||||||| |||||||| ||||||||    
T  18959051 aattcaaacaacagtagggctataacagcaa 18959021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 39 - 180
Target Start/End: Original strand, 23518283 - 23518428
Alignment:
Q  39 ttgcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaaca----acaa 134  Q
    ||||||| |||||||  ||||||||| ||||||  ||||||| ||||| ||    |||||||||||||||||| | | |||||| |||||||    || |    
T  23518283 ttgcagcagaatattatcatcaaacatcaacaatagtttaaacctccaaaatattatcttggcataaaagcctcaacgacataaattcaacagacaacca 23518382  T
Q  135 tagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
     ||||||| |||| |||  | ||||| |||||||||||||||||||    
T  23518383 aagggctataacatcaagttccaaaaattgatacataggaaagaaa 23518428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 4279477 - 4279554
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  4279477 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacatcaagtttcaaaatatgatacata 4279554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 19615809 - 19615886
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  19615809 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 19615886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 218
Target Start/End: Original strand, 31153985 - 31154066
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    ||||||||||||  ||||||  ||| |||||||||||||| ||||| ||   |  ||||||||||||||||||||||||||||    
T  31153985 agggctacaacaataatatttcaaaattgatacataggaa-gaaatcaagaaaataaatcccatcccacgtatcagagcccta 31154066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Original strand, 11878685 - 11878714
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaaa 220  Q
    ||||||||||||||||||||||||||||||    
T  11878685 aaatcccatcccacgtatcagagccctaaa 11878714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 218
Target Start/End: Complemental strand, 29182651 - 29182527
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||| |||||| | |||||||||  |||||  |||| ||||||||| || |||||||  |||  ||||||||||||||||| | || | ||||||    
T  29182651 tcttggcatgaaagccatttcaacataaaattcaatcacaa-agggctacatcaacaatatttcaaaaatgatacataggaaagaattcaagcaataaaa 29182553  T
Q  194 -tcccatcccacgtatcagagcccta 218  Q
     || | ||||||||||||||||||||    
T  29182552 atctcctcccacgtatcagagcccta 29182527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Original strand, 32627015 - 32627044
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaaa 220  Q
    ||||||||||||||||||||||||||||||    
T  32627015 aaatcccatcccacgtatcagagccctaaa 32627044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 16946351 - 16946233
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| |||| |||| ||||||||  || |||| |||||| ||| |||| || ||||||||  |||||||||||||||| ||| | |||||||| |    
T  16946351 atcatcatttatttagcagtggaatattctcaacaaaacaacaataactgttttaatctccataataaaatcttggcataaaa-cctcaacaacataaat 16946253  T
Q  125 tc-aacaacaatagggctaca 144  Q
    || |||||| |||||||||||    
T  16946252 tcaaacaac-atagggctaca 16946233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 144
Target Start/End: Complemental strand, 16952951 - 16952833
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| || | ||||| |||||||  ||||||| |||||| ||| |||| || ||||||||  |||||||||||||||| ||| | |||||||| |    
T  16952951 atcatcatttatgtagcagcagaatattctcatcaaaacaacaataactgttttaatctccataataaaatcttggcataaaa-cctcaacaacataaat 16952853  T
Q  125 tc-aacaacaatagggctaca 144  Q
    || |||||| |||||||||||    
T  16952852 tcaaacaac-atagggctaca 16952833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 109; Significance: 6e-55; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 20 - 234
Target Start/End: Complemental strand, 14648918 - 14648698
Alignment:
Q  20 ttcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatc 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    |||||||||| ||||||| |||||||| |||||||||||||||||||||||||    
T  14648918 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaactgtttaaatctccataattaaatcttggcataaaagccttatc 14648819  T
Q  116 aacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagag 213  Q
    ||||||| ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||| ||||||  |||||||||||    
T  14648818 aacataaattcaacaaccatagggctacgtcagcaatattcaaaacttgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcagag 14648719  T
Q  214 ccctaaaaactttgagccacc 234  Q
    ||||| | |||||||||||||    
T  14648718 ccctagacactttgagccacc 14648698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 2249691 - 2249465
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||||||||||||||    
T  2249691 acatccttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacatcaactgtttaaatctccataattaaatcttggcataaaagc 2249592  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgta 207  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | ||||||||||| |  |||||    
T  2249591 cttatcaacataaattcaacaaccatagggctacgtcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatctcgtacgta 2249492  T
Q  208 tcagagccctaaaaactttgagccacc 234  Q
    ||||||||||| | ||||| |||||||    
T  2249491 tcagagccctagacactttaagccacc 2249465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 45221434 - 45221266
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccg---tttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||| ||||||||||| |||||||||||| |||||||||| |   |||||| |||||||| ||||||||||||||||||||    
T  45221434 catccttcaaaatcatcattaatgttgcagcggaa-atttgcatcaaaacaacaacaacagctatttaaatctccataattaaatcttggcataaaagcc 45221336  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  45221335 ttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaa 45221266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 15 - 218
Target Start/End: Original strand, 5840773 - 5840981
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| ||||||||||||||||||||| || ||||||||||||    ||||| ||||  |||||| |||||||| ||||||||||||||||||||    
T  5840773 catccttcaaaatcatcattaattttgcagcgaaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 5840871  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtat 208  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||    
T  5840872 ttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtat 5840971  T
Q  209 cagagcccta 218  Q
    ||||||||||    
T  5840972 cagagcccta 5840981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 54972332 - 54972545
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||||||||| |||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  54972332 tcatcattaaatttgcagcggaaaatttgcatcaaaacaacaacagcaacagtttaaatctccataattaaatctttggcataaaagccttatcaacata 54972431  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaa 219  Q
    | ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||||||||||||     
T  54972432 aattcaacaaccatagggctacgtcagcaatattcaaaa-ttgatacataggaatgaaaaacaataagaaaatcccatcccatacgtatcagagccctag 54972530  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  54972531 acactttgagccacc 54972545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 54974942 - 54975155
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||||||||| |||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  54974942 tcatcattaaatttgcagcggaaaatttgcatcaaaacaacaacagcaacagtttaaatctccataattaaatctttggcataaaagccttatcaacata 54975041  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaa 219  Q
    | ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||||||||||||     
T  54975042 aattcaacaaccatagggctacgtcagcaatattcaaaa-ttgatacataggaatgaaaaacaataagaaaatcccatcccatacgtatcagagccctag 54975140  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  54975141 acactttgagccacc 54975155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 54977552 - 54977765
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||||||||| |||||||||||| ||||||||||||    ||||| |||| ||||||| |||||||| |||||||| |||||||||||||||||||||||    
T  54977552 tcatcattaaatttgcagcggaaaatttgcatcaaaacaacaacagcaacagtttaaatctccataattaaatctttggcataaaagccttatcaacata 54977651  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaa 219  Q
    | ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||||||||||||||     
T  54977652 aattcaacaaccatagggctacgtcagcaatattcaaaa-ttgatacataggaatgaaaaacaataagaaaatcccatcccatacgtatcagagccctag 54977750  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  54977751 acactttgagccacc 54977765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 14 - 219
Target Start/End: Original strand, 40597 - 40808
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| |||||  |||||||||||||| |||||||| ||||||||||||    ||||| |||| ||||||| |||||||| ||||||||||||||||| |    
T  40597 acatccttcaaagtcatcattaattttacagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaaac 40696  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgta 207  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||| |||||| ||||||| ||||   |   | |||||||||||||  |||||    
T  40697 cttatcaacataaattcaacaaccatagggctacgtcagcaatattcaaaaattgatatataggaatgaaaaacaataagaaaatcccatcccgtacgta 40796  T
Q  208 tcagagccctaa 219  Q
    ||||||||||||    
T  40797 tcagagccctaa 40808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 14653301 - 14653140
Alignment:
Q  74 gtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    |||| |||||||||||  || ||||||||| |||| ||||||| |||||  || |||| || ||||||||||||| ||||||||||||||||||||||||    
T  14653301 gtttgaaactccataataaattcttggcatgaaagtcttatcaccataaaatccaacatcagtagggctacaacatcaatattcaaaatttgatacatag 14653202  T
Q  173 gaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | ||||||||||||||||||||||||||||||  | |||||||||||||    
T  14653201 gaaagaaattaaacaataaaatcccatcccacgtatcagagccctggacactttgagccacc 14653140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 13204127 - 13203963
Alignment:
Q  75 tttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacata-- 171  Q
    |||||||||||||||  || ||||||||| ||||||||| || |||||  || |||| ||||||||||||||||||||||||||||||||||||||||      
T  13204127 tttaaaactccataataaattcttggcatgaaagccttaacatcataaaatccaacatcaatagggctacaacagcaatattcaaaatttgatacatata 13204028  T
Q  172 --ggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
      ||||||||||||| | |||||||| |||||||||||||||||||||| | |||||||||||||    
T  13204027 taggaaagaaattaaactataaaatctcatcccacgtatcagagccctagacactttgagccacc 13203963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 86 - 234
Target Start/End: Complemental strand, 12961971 - 12961823
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat 185  Q
    |||| ||||||||||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  |||     
T  12961971 ataattaaatcttggcataaaagccttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaataaaggtaa- 12961873  T
Q  186 cgataaaatccc-atcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |  ||||||||| ||| ||||||||||||||||| | |||||||||||||    
T  12961872 cattaaaatcccaatctcacgtatcagagccctagacactttgagccacc 12961823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 13303794 - 13303684
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    ||||||| ||||||||||||  || || | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||    
T  13303794 ttcaacagcaatagggctacgccatcagtgttcaaaatttgatacataggaaagaaattaaaagataaaatcccatcccacgtatcagagccctagacac 13303695  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  13303694 tttgagccacc 13303684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 13314470 - 13314360
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    ||||||| ||||||||||||  || || | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||    
T  13314470 ttcaacatcaatagggctacgccatcagtgttcaaaatttgatacataggaaagaaattaaaagataaaatcccatcccacgtatcagagccctagacac 13314371  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  13314370 tttgagccacc 13314360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 233
Target Start/End: Complemental strand, 13325385 - 13325276
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    ||||||| |||||||||||| ||| || | |||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| | ||    
T  13325385 ttcaacatcaatagggctacgacatcagtgttcaaaatttgatacataggaaagaaattaaaagataaaatcccatcccacgtatcagagccctagacac 13325286  T
Q  224 tttgagccac 233  Q
    ||||| ||||    
T  13325285 tttgaaccac 13325276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 17199608 - 17199483
Alignment:
Q  94 atcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    |||||||||| ||||||  |||||||||| ||||| || |||||||||||||||| |||||||||||| |||||||||||||||||| |||| | |  ||    
T  17199608 atcttggcatgaaagccacatcaacataaattcaaacatcaatagggctacaacaacaatattcaaaaattgatacataggaaagaagttaagcaaataa 17199509  T
Q  193 atcccatcccacgtatcagagcccta 218  Q
    ||||||||||||||||||||||||||    
T  17199508 atcccatcccacgtatcagagcccta 17199483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 22163358 - 22163459
Alignment:
Q  134 atagggctacaacagcaatatt-caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    |||||||||||||| ||||||| ||||| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||    
T  22163358 atagggctacaacaacaatatttcaaaaattgatacataggaaagaaattaagcaataaaatcccatcccacgtatcagagccctagacactttgagcca 22163457  T
Q  233 cc 234  Q
    ||    
T  22163458 cc 22163459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 11851270 - 11851167
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacatagg-aaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    ||||| |||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| ||| |||||||||||||||||| | |||||||||    
T  11851270 caatatggctacaacagcaatattcaaaatttgatacataggaaaagaaattaagcaataaaatctcataccacgtatcagagccctagacactttgagc 11851171  T
Q  231 cacc 234  Q
    ||||    
T  11851170 cacc 11851167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 13435318 - 13435402
Alignment:
Q  150 aatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||| |||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | |||||||||||||    
T  13435318 aatatttaaaatttgatacataggaaagaaattaagcgataaaatctcatcccacgtatcagagccctagacactttgagccacc 13435402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 132 - 234
Target Start/End: Original strand, 20187266 - 20187369
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacataggaaa-gaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    |||||||||||||||| ||||||| ||||||| |||||||||||| ||| |||| | |||||||| |||||||||||||||||||||||| |||||||||    
T  20187266 caatagggctacaacaacaatatttaaaatttaatacataggaaaagaatttaagcaataaaatctcatcccacgtatcagagccctaaacactttgagc 20187365  T
Q  231 cacc 234  Q
    ||||    
T  20187366 cacc 20187369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 2270915 - 2270700
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||||     |||||||||| |||| |  |||||||| ||||| ||||||||||||    
T  2270915 acatccttcaaaatcatcattaattt-gcagcggaatatttgcatcaaaagcaacaacaacaactgtttgattctccataaataaatgttggcataaaag 2270817  T
Q  109 ccttatcaacataagttcaacaac--aata---gggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc- 202  Q
    ||| |||||||||| |||||||||  ||||   |||||||| ||  ||  | |||||||||||||||||||| |||| ||| |  | ||||||||||||     
T  2270816 cctcatcaacataaattcaacaaccaaataaaggggctacatcattaagttccaaaatttgatacataggaatgaaaataagcagttaaatcccatcccg 2270717  T
Q  203 -acgtatcagagcccta 218  Q
     | ||||||||||||||    
T  2270716 tatgtatcagagcccta 2270700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 16830526 - 16830427
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacatagg-aaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||   ||||| ||||||||||||||||| ||||||| | |||||||||||||    
T  16830526 agggctacaacaacaatattcaaaatttgatacataggaaaagaaattaagaaataaattcccatcccacgtatcaaagccctagacactttgagccacc 16830427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 16839025 - 16838926
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacatagg-aaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| ||||||||||||||||||||||||| |||||||||||   ||||| ||||||||||||||||| ||||||| | |||||||||||||    
T  16839025 agggctacaacaacaatattcaaaatttgatacataggaaaagaaattaagaaataaattcccatcccacgtatcaaagccctagacactttgagccacc 16838926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 92 - 234
Target Start/End: Complemental strand, 16803025 - 16802883
Alignment:
Q  92 aaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    |||||||||||||||||||| | | | | || | ||||||  ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||     ||    
T  16803025 aaatcttggcataaaagcctcaaccagaaaaatccaacaatcatagggctacaacagcattatccaaaatttgatacataggaatgaaagaaacattaaa 16802926  T
Q  192 aatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||||| | |||||||||||||    
T  16802925 aatcccatcccacgtatcagagccctagacactttgagccacc 16802883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 14864366 - 14864505
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    |||||||||||||| | | |||||||||  |||||  |||| ||||||||| ||||||||||  ||| |||||||||||||||||| | || | ||| ||    
T  14864366 tcttggcataaaagtcatttcaacataaaattcaatcacaa-agggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaatagaa 14864464  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | ||| |||||||||    
T  14864465 tcccatcccacgtatcagagccctagacactgtgagccacc 14864505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 17706792 - 17706892
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||     ||||||||||||||||||||||||||||| | ||||||||||||    
T  17706792 atagggctacaacagcattatccaaaatttgatacataggaatgaaagaaacattaaaaatcccatcccacgtatcagagccctagacactttgagccac 17706891  T
Q  234 c 234  Q
    |    
T  17706892 c 17706892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 54900766 - 54900553
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| |||||||||||||| |||||||||||||| |||||||     |||| ||||| |||| |  |||||||| ||||||| ||||||||||    
T  54900766 acatccttcaaaatcatcattaattt-gcagcggaatatttacatcaaaagcaacaacgacaactgtttgattctccataaataaatctgggcataaaag 54900668  T
Q  109 ccttatcaacataagttcaacaa-caat--agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--a 203  Q
    ||| |||||||| | |||||||| ||||  ||||||||||||  ||  | |||||||| ||||||||||| |||| ||| |  | ||||| ||||||  |    
T  54900667 cctcatcaacatcaattcaacaaccaataaagggctacaacattaagttccaaaattttatacataggaatgaaaataagcagttaaatctcatcccgta 54900568  T
Q  204 cgtatcagagcccta 218  Q
    |||||||||||||||    
T  54900567 cgtatcagagcccta 54900553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 29 - 171
Target Start/End: Original strand, 14292244 - 14292391
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacat-aag 123  Q
    |||||||| | ||||||||||||||  |||||||    |||||| ||| ||||||| ||||||||  || ||||||||||||||||||| |||||| ||     
T  14292244 atcattaaatctgcagcggaatattctcatcaaaacaacaacaataactgtttaaacctccataataaattcttggcataaaagccttaacaacataaaa 14292343  T
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
    ||||| ||||| ||||||||| |||||| | ||||||| |||||||||    
T  14292344 ttcaataacaaaagggctacatcagcaacaatcaaaatatgatacata 14292391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 17130316 - 17130414
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||||||||||  ||| |||||||||||||||||| | || | |||||||| |||||||||||||||||||||| | ||| |||||||||    
T  17130316 agggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaaatctcatcccacgtatcagagccctagacactgtgagccacc 17130414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 14542297 - 14542459
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| ||||| || |||||||| | ||||||||||||||  |||||||    |||||| ||| ||||||| ||||||||  || |||||||||||||||    
T  14542297 acatccttcaaaattatcattaaatctgcagcggaatattctcatcaaaacaacaacaataactgtttaaacctccataataaattcttggcataaaagc 14542396  T
Q  110 cttatcaacat-aagttcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||| |||||| || | ||| ||||| ||||||||| |||||| | ||||||| |||||||||    
T  14542397 cttaacaacataaaatccaataacaaaagggctacatcagcaacaatcaaaatatgatacata 14542459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 17156704 - 17156804
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    |||||||||||||| || ||| |||||||||||||||||||| ||||  ||     ||||||||||||||||||||||||||||| | ||||||||||||    
T  17156704 atagggctacaacaacattatccaaaatttgatacataggaatgaaagaaacattaaaaatcccatcccacgtatcagagccctagacactttgagccac 17156803  T
Q  234 c 234  Q
    |    
T  17156804 c 17156804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 24191405 - 24191505
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||     ||||||||||||||| ||||||||||||| | ||||||||||||    
T  24191405 atagggctacaacagcattatccaaaatttgatacataggaatgaaagaaacattaaaaatcccatcccacatatcagagccctagacactttgagccac 24191504  T
Q  234 c 234  Q
    |    
T  24191505 c 24191505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 12201843 - 12201965
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| | |||||||||||| ||||||||||||||||||||||     |||||||||| ||||||  ||||||||   ||||||||||||||||    
T  12201843 acatccttcaaaaacatcattaattt-gcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatcttggcataaaag 12201941  T
Q  109 ccttatcaacataagttcaacaac 132  Q
    ||| ||||| |||| |||||||||    
T  12201942 cctcatcaaaataaattcaacaac 12201965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 26008742 - 26008881
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaat 194  Q
    ||||||||||||||||| | | | | || | ||||||  ||||||||||||||||| ||| ||||| |||||||||||||| ||||  ||     |||||    
T  26008742 tcttggcataaaagcctcaaccagaaaaatccaacaatcatagggctacaacagcattatccaaaacttgatacataggaatgaaagaaacattaaaaat 26008841  T
Q  195 cccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    | |||||||||||||||||||||| | |||||||||||||    
T  26008842 ctcatcccacgtatcagagccctagacactttgagccacc 26008881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 19236562 - 19236464
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||| ||||||  ||| ||||||||||| |||||| | || | ||||||||||||||||||||||||||||||| | ||| |||||||||    
T  19236562 agggctacatcagtaatatttcaaaattgatacatagaaaagaattcaagcaataaaatcccatcccacgtatcagagccctagacactgtgagccacc 19236464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 12254774 - 12254882
Alignment:
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatccc-atcccacgtatcagagccctaaaaactt 225  Q
    |||||||||||||||||| ||  | ||| ||||||||||||||||||||||||  ||| |  ||||||||| || |||||||||| ||||||| | ||||    
T  12254774 aacaacaatagggctacatcaatattatccaaaatttgatacataggaaagaaggtaagcattaaaatcccaattccacgtatcaaagccctagacactt 12254873  T
Q  226 tgagccacc 234  Q
    |||||||||    
T  12254874 tgagccacc 12254882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 12034907 - 12034808
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa-tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||||||||||  ||| |||||||||| ||||||| | || | |||||| ||||||||||||||||||||||||| | ||| |||||||||    
T  12034907 agggctacatcagcaatatttcaaaattgatacatatgaaagaattcaagcaataaaaatcccatcccacgtatcagagccctagacactgtgagccacc 12034808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 24123980 - 24123790
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| | || |||||||||||||  ||||||| || ||||||| ||||||| ||||| ||  | ||||||||||||| |||||| |||||||| |    
T  24123980 atcatcatttaattagcagcggaatattatcatcaaaacatcaacaactgtttaaacctccaaaataatatcttggcataaa-gccttaacaacataa-t 24123883  T
Q  125 tcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata--aaatcccatcccacgtatcagagcccta 218  Q
    ||||| |  ||||||| |||||| |||  | ||||||  ||||||||||||||||   || | |||  || |||||||||||||||||||||||||    
T  24123882 tcaaccaacatagggccacaacatcaagttccaaaataagatacataggaaagaa---aaacaataataattcccatcccacgtatcagagcccta 24123790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 41456695 - 41456586
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    |||| |||| |||||||||||||| || ||  ||||||||||||||||| || ||||  || | |||||||| |||||||||||||||||||||| | ||    
T  41456695 ttcatcaaccatagggctacaacaacattaaccaaaatttgatacatag-aatgaaagaaaacaataaaatctcatcccacgtatcagagccctagacac 41456597  T
Q  224 tttgagccacc 234  Q
    |||||| ||||    
T  41456596 tttgagtcacc 41456586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 18130391 - 18130264
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    ||||||||||||||||||| ||||| | || ||||| |||||||||||||||| || ||   | |||||||||||||| ||||| |||| ||| | ||||    
T  18130391 aatcttggcataaaagcctcatcaa-agaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacacaggaatgaaaataaacaataa 18130293  T
Q  192 aatcccatccc--acgtatcagagcccta 218  Q
    |||| ||||||  ||||||||||||||||    
T  18130292 aatctcatcccgtacgtatcagagcccta 18130264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 4676818 - 4676901
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | || ||||||||||||||||||||||||||||    
T  4676818 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaatgaaatcccatcccacgtatcagagcccta 4676901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 234
Target Start/End: Complemental strand, 16383407 - 16383305
Alignment:
Q  130 aacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgag 229  Q
    ||||| ||||||||| |||||   | ||||| |||||||||||||| |||||||| | ||||| ||||||||||||||||||||||||  | ||||||||    
T  16383407 aacaaaagggctacatcagcatgttccaaaaattgatacataggaa-gaaattaaacaataaa-tcccatcccacgtatcagagccctggacactttgag 16383310  T
Q  230 ccacc 234  Q
    |||||    
T  16383309 ccacc 16383305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 136 - 234
Target Start/End: Original strand, 10553520 - 10553619
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa-tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| ||||||||||  ||  |||||||||||||||||| | || | |||||| || |||||||||||||||||||||| | ||| |||||||||    
T  10553520 agggctacatcagcaatatttcaagattgatacataggaaagaattcaagcaataaaaatctcatcccacgtatcagagccctagacactgtgagccacc 10553619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 10609375 - 10609183
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaacaaca---acaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    |||||||||||||||| |||||||||||||| ||||||||   ||||| ||| ||   |||||||    |||||||||||||||||| |||||   ||      
T  10609375 catcattaattttgcaacggaatatttgcattaaacaacaacgacaacagttaaattgtccataaaactatcttggcataaaagcctcatcaaagaaatc 10609276  T
Q  125 tcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    | |||||| ||| ||||||| || | || |||  || |||||||||||||| ||||  |||  |  ||||||||||||||||||||||||||||    
T  10609275 taaacaaccataaggctacatcatc-atgttcctaaattgatacataggaatgaaaaaaatataagaaatcccatcccacgtatcagagcccta 10609183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 11965536 - 11965339
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||||||||||||||||||||||| |||     |||| ||||| ||||||  ||||||||    ||| | | |||||||||| |||||   ||    
T  11965536 catcattaattttgcagcggaatatttgcattaaaatcaacaacgacaacggtttaattctccataaaattatcctagtataaaagcctcatcaaagaaa 11965437  T
Q  123 gttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
      |  ||||||||||||||||| || ||   | |||||||||||||||||||| |||| ||| |  ||||||||||||||  |||||| |||||||||    
T  11965436 tctatacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaagtaaacattaaaatcccatcccgtacgtatgagagcccta 11965339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 44774877 - 44774938
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    ||||||||||||||||| || ||| |||| | |||||||||||||||||||||||||||||||    
T  44774877 caaaatttgatacatag-aatgaatttaaacaataaaatcccatcccacgtatcagagcccta 44774938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 156 - 218
Target Start/End: Original strand, 44780061 - 44780122
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    ||||||||||||||||| || ||| |||| | |||||||||||||||||||||||||||||||    
T  44780061 caaaatttgatacatag-aatgaatttaaacaataaaatcccatcccacgtatcagagcccta 44780122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 18136887 - 18136760
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    ||||||||||||||||||| ||||| | || ||||| ||||||||| |||||| || ||   | |||||||||||||| ||||| |||| ||| | ||||    
T  18136887 aatcttggcataaaagcctcatcaa-agaaattcaaacaacaatagagctacatcatcatgttccaaaatttgatacacaggaatgaaaataaacaataa 18136789  T
Q  192 aatcccatccc--acgtatcagagcccta 218  Q
    |||| ||||||  ||||||||||||||||    
T  18136788 aatctcatcccgtacgtatcagagcccta 18136760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 28 - 69
Target Start/End: Complemental strand, 18757677 - 18757636
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaacaacaac 69  Q
    ||||||||||||||||||||||||||||||| ||||||||||    
T  18757677 catcattaattttgcagcggaatatttgcattaaacaacaac 18757636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 17190476 - 17190560
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || | | |||||||||||||||||||| ||||  ||     |||||||||||||||||||||||||||||    
T  17190476 atagggctacaacaacattttccaaaatttgatacataggaatgaaagaaacattaaaaatcccatcccacgtatcagagcccta 17190560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 41 - 180
Target Start/End: Original strand, 29550394 - 29550530
Alignment:
Q  41 gcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggc 140  Q
    ||||||||||||   ||||||||| |||||||  |||||||||||| ||| | |||||||||| ||||||| | ||||||||  ||||| |  |||||||    
T  29550394 gcagcggaatatcatcatcaaacatcaacaactatttaaaactccaaaacaatatcttggcat-aaagcctcaacaacataa--tcaaccatcatagggc 29550490  T
Q  141 tacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
     | |||| |||  | ||||| |||||||||||||||||||    
T  29550491 cataacatcaagttccaaaaattgatacataggaaagaaa 29550530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 10416042 - 10415984
Alignment:
Q  162 ttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaa 220  Q
    |||||||||||||||||| | ||   |||||| ||||||||||||||||||||||||||    
T  10416042 ttgatacataggaaagaattcaaataataaaaccccatcccacgtatcagagccctaaa 10415984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 10422712 - 10422654
Alignment:
Q  162 ttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaa 220  Q
    |||||||||||||||||| | ||   |||||| ||||||||||||||||||||||||||    
T  10422712 ttgatacataggaaagaattcaaataataaaaccccatcccacgtatcagagccctaaa 10422654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 122
Target Start/End: Original strand, 12418854 - 12418950
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatc-aaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||| |||| |||||||||||||  |||| ||||||||||||| ||||||| ||| | ||  ||||| |||||| ||||||||| ||||||||    
T  12418854 atcatcatttatttagcagcggaatattatcatcaaaacaacaacaactgtttaaacctcgaaaataaaatcatggcat-aaagccttaacaacataa 12418950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 122
Target Start/End: Complemental strand, 17244325 - 17244236
Alignment:
Q  36 attttgcagcggaatatttgcatcaa----acaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||||||||||||||||||    ||||||| ||||||||||  |||||||| |  |||||||||||||| ||| ||||| ||||    
T  17244325 attttgcagcggaatatttgcatcaaaacgacaacaataaccgtttaatcctccataaat-tatcttggcataaaaacctcatcaaaataa 17244236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 11645452 - 11645360
Alignment:
Q  40 tgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttca 127  Q
    ||||||||||||||| |||||||     |||||||||| ||||||   |||||||   ||||||||||||||||||| ||||| |||||||||    
T  11645452 tgcagcggaatattttcatcaaaagcaacaacaacaactgtttaattttccataaagtaatcttggcataaaagcctcatcaaaataagttca 11645360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 18719723 - 18719633
Alignment:
Q  82 ctccataactaaatcttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||| ||||||| ||||||||||||||| |||||||| |||||| ||  || |||||||||||| |||   ||||||| |||||||||    
T  18719723 ctccataattaaatct-ggcataaaagccttaacaacataaattcaaccactaaaaagggctacaacatcaagtctcaaaatatgatacata 18719633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 11306406 - 11306307
Alignment:
Q  38 tttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaac 132  Q
    ||||||||||||||||||||| |     ||||||||||||  |||||  ||||||||   ||||||||||||||||| | ||||| |||| |||||||||    
T  11306406 tttgcagcggaatatttgcattaaaagcaacaacaacaactatttaattctccataaaataatcttggcataaaagcgtcatcaagataaattcaacaac 11306307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 12469543 - 12469444
Alignment:
Q  38 tttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaac 132  Q
    ||||||||||| ||||||||| |     |||||||||||||||||||  |||| | |   ||||||||||||||||||| ||||| |||| |||||||||    
T  12469543 tttgcagcggattatttgcattaaaagcaacaacaacaaccgtttaattctccttcaaataatcttggcataaaagcctcatcaagataaattcaacaac 12469444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 138 - 218
Target Start/End: Original strand, 17495771 - 17495853
Alignment:
Q  138 ggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
    ||||||| ||||||  | ||||| |||||||||||||| |||| ||| | || ||||||||||||  ||||||||||||||||    
T  17495771 ggctacatcagcaagttccaaaaattgatacataggaatgaaaataagcaattaaatcccatcccgtacgtatcagagcccta 17495853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 49162689 - 49162767
Alignment:
Q  41 gcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacat 120  Q
    |||||||||||||  ||||||||| ||||||  ||||||||||||| ||  | |||||||||| ||||||||| ||||||    
T  49162689 gcagcggaatattatcatcaaacatcaacaattgtttaaaactccaaaataatatcttggcat-aaagccttaacaacat 49162767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 8583957 - 8583880
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  8583957 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 8583880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 220
Target Start/End: Complemental strand, 10390930 - 10390872
Alignment:
Q  162 ttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaa 220  Q
    ||||||||||| |||||| | ||   |||||| ||||||||||||||||||||||||||    
T  10390930 ttgatacatagaaaagaattcaaataataaaaccccatcccacgtatcagagccctaaa 10390872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 12356633 - 12356551
Alignment:
Q  40 tgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaa 117  Q
    |||||||||||||||||||||||     |||||||||  ||||||  ||||||||   ||||||||||||||||||| |||||    
T  12356633 tgcagcggaatatttgcatcaaaagcaacaacaacaatggtttaattctccataaagtaatcttggcataaaagcctcatcaa 12356551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 12363182 - 12363100
Alignment:
Q  40 tgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaa 117  Q
    |||||||||||||||||||||||     |||||||||  ||||||  ||||||||   ||||||||||||||||||| |||||    
T  12363182 tgcagcggaatatttgcatcaaaagcaacaacaacaatggtttaattctccataaagtaatcttggcataaaagcctcatcaa 12363100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 13969464 - 13969387
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  13969464 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacatcaagtttcaaaatatgatacata 13969387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 13974943 - 13974866
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  13974943 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacatcaagtttcaaaatatgatacata 13974866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 14084045 - 14084122
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  14084045 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 14084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 14089446 - 14089523
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  14089446 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 14089523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 49398986 - 49399063
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  49398986 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 49399063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Original strand, 10767356 - 10767385
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaaa 220  Q
    ||||||||||||||||||||||||||||||    
T  10767356 aaatcccatcccacgtatcagagccctaaa 10767385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 30126066 - 30126018
Alignment:
Q  123 gttcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||| | ||||||| |||||  |||||||||||||||||||    
T  30126066 gttcaacaacaacaaggctacatcagcataattcaaaatttgatacata 30126018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 13 - 234
Target Start/End: Complemental strand, 42273 - 42050
Alignment:
Q  13 gacatcattcaagatcatcattaattttgcagcggaatattt-gcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||||| ||||| |||||||||||||||| ||| | | |||| |||||||| |||||||||| ||||||| |||||||| ||||| |||||||||||| |    
T  42273 gacatccttcaaaatcatcattaattttgtagctgtaaattttgcatcaaaacaacaacaactgtttaaacctccataattaaattttggcataaaagtc 42174  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatca 210  Q
    ||| |||||||| |||| |||| ||||||||||| ||||||||| |||||||||||||||||||| ||||  || |  ||||||||||||||||||||||    
T  42173 ttaacaacataaattcagcaacgatagggctacatcagcaatatccaaaatttgatacataggaatgaaagaaagcattaaaatcccatcccacgtatca 42074  T
Q  211 gagccctaaaaactttgagccacc 234  Q
    |||||||| | |||||||||||||    
T  42073 gagccctagacactttgagccacc 42050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0301 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0301
Description:

Target: scaffold0301; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 18 - 232
Target Start/End: Complemental strand, 14061 - 13844
Alignment:
Q  18 cattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaacc---gtttaaaactccataactaaatcttggcataaaagccttat 114  Q
    ||||||| |||| ||||||||||||| ||||| ||||||||||||||||||||||    ||||||| |||||||| ||||||||| ||||||||||||||    
T  14061 cattcaaaatcaacattaattttgcaacggaaaatttgcatcaaacaacaacaacaactgtttaaatctccataattaaatcttgacataaaagccttat 13962  T
Q  115 caacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatccc-atcccacgtatcagag 213  Q
    |||||||| ||||||||| ||||| ||||| || |||||||||||| |||||||||| ||| |||  ||| |  ||||||||| ||||||||||||||||    
T  13961 caacataaattcaacaaccataggactacatcaacaatattcaaaaattgatacataagaatgaaggtaa-cattaaaatcccaatcccacgtatcagag 13863  T
Q  214 ccctaaaaactttgagcca 232  Q
    ||||| | |||||||||||    
T  13862 ccctagacactttgagcca 13844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 101; Significance: 3e-50; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 20 - 234
Target Start/End: Original strand, 33664 - 33884
Alignment:
Q  20 ttcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatc 115  Q
    ||||| |||||||||||||||||||||||| ||||||||||||    |||||||||| ||||||| |||||||  ||||||||||||||||||| |||||    
T  33664 ttcaaaatcatcattaattttgcagcggaaaatttgcatcaaaacaacaacaacaacagtttaaatctccatagttaaatcttggcataaaagcattatc 33763  T
Q  116 aacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagag 213  Q
    ||||||| ||||||||| ||||||||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||| ||||||  |||||||||||    
T  33764 aacataaattcaacaaccatagggctacgtcagcaatattcaaaaattgatacataggaatgaaaaacaataagaaaatctcatcccgtacgtatcagag 33863  T
Q  214 ccctaaaaactttgagccacc 234  Q
    ||||| | |||||||||||||    
T  33864 ccctagacactttgagccacc 33884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 97; Significance: 8e-48; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 3765 - 3597
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    ||||| ||||  |||||| |||||||| ||||||||||||||||||||    
T  3765 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaaacaacaacagcaactatttaaatctccataattaaatcttggcataaaagcc 3667  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  3666 ttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaa 3597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 97; Significance: 8e-48; HSPs: 6)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 258023 - 258246
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaata-tttgcatcaa----acaacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| |||||||||||||||||||| ||| | ||||||||||    | ||||||||| ||||||| |||||||| ||||||||||||||||||    
T  258023 acatccttcaaaatcatcattaattttgcagcagaaaaatttgcatcaatacaataacaacaactgtttaaatctccataattaaatcttggcataaaag 258122  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtat 208  Q
    |||||||||||||| ||| ||||| ||||||||||| ||||||||||||||| |||||||| ||||| |||  ||| |  |||||||||||||||||||     
T  258123 ccttatcaacataaattccacaaccatagggctacatcagcaatattcaaaaattgatacacaggaatgaaggtaa-cattaaaatcccatcccacgtaa 258221  T
Q  209 cagagccctaaaaactttgagccacc 234  Q
    ||||| |||| | |||||||||||||    
T  258222 cagag-cctagacactttgagccacc 258246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 151975 - 152113
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaat 194  Q
    ||||||||| ||||||||| || ||||| | ||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||| | |||||||    
T  151975 tcttggcatgaaagccttaacatcataaatccaacatcaatagggctacagcagcaatattcaaaatttgatacatagg-aagaaattaagcaataaaat 152073  T
Q  195 cccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    | |||||||||||||||||||||| | |||||||||||||    
T  152074 ctcatcccacgtatcagagccctagacactttgagccacc 152113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 251404 - 251617
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| |||||||||||||| ||||||||||||||||||||     |||||| ||||| ||||||  |||||||| ||||| | |||||||||     
T  251404 acatccttcaaaatcatcattaattt-gcagcggaatatttgcatcaaaagcaacaacgacaactgtttaattctccataaataaatataggcataaaaa 251502  T
Q  109 ccttatcaacataagttcaacaa-caat--agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatc-gataaaatcccatccc-- 202  Q
    ||| |||||||||| |||||||| ||||  ||||||||| ||  ||  | |||||||||||||||||||| |||| ||| | ||| ||||||||||||      
T  251503 cctcatcaacataaattcaacaaccaataaagggctacatcattaagttccaaaatttgatacataggaatgaaaataagcagat-aaatcccatcccgt 251601  T
Q  203 acgtatcagagcccta 218  Q
    ||||||||||| ||||    
T  251602 acgtatcagagtccta 251617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 198010 - 197883
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    ||||||||||||||||||| ||||| | || ||||| |||||||||||||||| || ||   | |||||||||||||||||||| |||| ||| | ||||    
T  198010 aatcttggcataaaagcctcatcaa-agaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaataagcaataa 197912  T
Q  192 aatcccatccc--acgtatcagagcccta 218  Q
    |||||||||||  ||||||||||||||||    
T  197911 aatcccatcccgtacgtatcagagcccta 197883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 218
Target Start/End: Original strand, 146526 - 146739
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| | |||||||||||| ||| ||||||||||||||||||     |||||||||| ||||||  ||||||||   ||||||||||||||||    
T  146526 acatccttcaaaaacatcattaattt-gcaacggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatcttggcataaaag 146624  T
Q  109 ccttatcaacataagttcaacaac--aat-agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--a 203  Q
    ||| ||||| |||| | |||||||  ||| ||||||||| || ||   | ||||| |||||||||||||| |||| ||| | || ||||||||||||  |    
T  146625 cctcatcaaaataaatccaacaactaaataagggctacatcaacatgttccaaaaattgatacataggaatgaaaataagcaattaaatcccatcccgta 146724  T
Q  204 cgtatcagagcccta 218  Q
    |||||||| ||||||    
T  146725 cgtatcagtgcccta 146739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 175224 - 175147
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  175224 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 175147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 96; Significance: 3e-47; HSPs: 2)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 234
Target Start/End: Original strand, 25789 - 26000
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaacaacaac----aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag- 123  Q
    |||||||| | ||||||||||||||  |||||||||||||     ||| |||| |||||||||||  || ||||||||| ||||||| | || |||||      
T  25789 atcattaaatatgcagcggaatattctcatcaaacaacaattcataactgttttaaactccataataaattcttggcatgaaagcctcaacatcataaaa 25888  T
Q  124 -ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaa 222  Q
     | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | |    
T  25889 atccaacatcaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaacaataaaatctcatcccacgtatcagagccctagaca 25988  T
Q  223 ctttgagccacc 234  Q
    ||||||||||||    
T  25989 ctttgagccacc 26000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 29 - 234
Target Start/End: Original strand, 41472 - 41682
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaacaacaac----aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    |||||||| | ||||||||||||||  |||||||||||||     |||  ||| |||||||||||  || ||||||||| ||||||||| || |||||      
T  41472 atcattaaatctgcagcggaatattctcatcaaacaacaattcataactattttaaactccataataaattcttggcatgaaagccttaacatcataaaa 41571  T
Q  125 tc-aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaac 223  Q
    || |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||||||||||| | ||    
T  41572 tccaacatcgatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaaacaataaaatctcatcccacgtatcagagccctagacac 41671  T
Q  224 tttgagccacc 234  Q
    |||||||||||    
T  41672 tttgagccacc 41682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 92; Significance: 8e-45; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 26 - 234
Target Start/End: Complemental strand, 125112 - 124901
Alignment:
Q  26 atcatcattaat-tttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaa-gccttatcaaca 119  Q
    |||||||||||  ||||||||||||||||||||| |||    |||||||||| ||||||| |||||||| ||||||||||||||||| ||||||   |||    
T  125112 atcatcattaaaatttgcagcggaatatttgcataaaaacaacaacaacaactgtttaaacctccataattaaatcttggcataaaaagcctta---aca 125016  T
Q  120 taagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaa 219  Q
    ||| ||||||||| | | ||||||| ||||||||  |||||||||||||||||||||||| |||| | |||||||||||||| |||||||||| |||||     
T  125015 taaattcaacaaccacaaggctacatcagcaataaccaaaatttgatacataggaaagaagttaagcaataaaatcccatccaacgtatcagaaccctag 124916  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  124915 acactttgagccacc 124901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 13412 - 13313
Alignment:
Q  135 tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||| ||  || |||||||||||||||||||| ||||  || | |||||||  |||||||||||||| ||||||| | |||||||||||||    
T  13412 tagggctacaacatcatcatccaaaatttgatacataggaatgaaagaaaacaataaaatttcatcccacgtatcaaagccctagacactttgagccacc 13313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 90; Significance: 1e-43; HSPs: 2)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 8645 - 8484
Alignment:
Q  74 gtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    |||| |||||||||||  || ||||||||| ||||||||| || |||||  || |||| || |||||||| |||||||||||||||||||||||||||||    
T  8645 gttttaaactccataataaattcttggcatgaaagccttaacatcataaaatccaacatcagtagggctataacagcaatattcaaaatttgatacatag 8546  T
Q  173 gaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  8545 gaaagaaattaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 8484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 15083 - 14922
Alignment:
Q  74 gtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    |||| |||||||||||  || ||||||||| ||||||||| || |||||  || |||| || ||||||||||||||||||||||||||||||||| ||||    
T  15083 gttttaaactccataataaattcttggcatgaaagccttaacatcataaaatccaacatcagtagggctacaacagcaatattcaaaatttgatatatag 14984  T
Q  173 gaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  14983 gaaagaaattaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 14922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 86; Significance: 3e-41; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 2105167 - 2105328
Alignment:
Q  74 gtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    |||| |||||||||||  || ||||||||| ||||||||| || |||||  || |||| || ||||||||||||| ||||||||||||||||||||||||    
T  2105167 gttttaaactccataataaattcttggcatgaaagccttaacatcataaaatccaacatcagtagggctacaacaacaatattcaaaatttgatacatag 2105266  T
Q  173 gaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | ||||||| ||||||||||||||||||||||| | |||||||||||||    
T  2105267 gaaagaaattaaacaataaaattccatcccacgtatcagagccctagacactttgagccacc 2105328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 180
Target Start/End: Complemental strand, 20964657 - 20964487
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagc 109  Q
    ||||| |||||  |||||||||||||| |||||||| ||||||||||||    ||||| |||| ||||||| |||||||| ||||||||||||||||| |    
T  20964657 acatccttcaaagtcatcattaattttacagcggaaaatttgcatcaaaacaacaacagcaactgtttaaatctccataattaaatcttggcataaaaac 20964558  T
Q  110 cttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    ||||||||||||| ||||||||| ||||||||||  ||||||||||||||| |||||| ||||||| ||||    
T  20964557 cttatcaacataaattcaacaaccatagggctacgtcagcaatattcaaaaattgatatataggaatgaaa 20964487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 20723641 - 20723788
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat 185  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  | |     
T  20723641 ataattaaatcttggcataaaaaccttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaataaaggtga- 20723739  T
Q  186 cgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |  ||||||| |||||||||||||||||| ||||| |||||||||||||    
T  20723740 cattaaaatctcatcccacgtatcagagcgctaaacactttgagccacc 20723788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 218
Target Start/End: Original strand, 24651864 - 24652062
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||||||||||||||||||||||| |||     |||| ||||| ||||||  ||||||||    ||| |||||||||||||| ||||| ||||    
T  24651864 catcattaattttgcagcggaatatttgcattaaaagcaacaacgacaactgtttaattctccataaaatcatcctggcataaaagcctcatcaaaataa 24651963  T
Q  123 gttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
     ||||| |||||||||||||||| ||||||| | |||||||||||||||||||| |||| ||| |  |||||| ||||| |  ||||||||||||||||    
T  24651964 attcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaagtaagcattaaaattccatctcgtacgtatcagagcccta 24652062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 24503718 - 24503942
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaag 108  Q
    ||||| |||||| |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||||| |||||| | |    
T  24503718 acatccttcaag-tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatctttggcataga-g 24503815  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgt 206  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||   |   | |||||||||||||  ||||    
T  24503816 ccttatcaacataaattcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgt 24503914  T
Q  207 atcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||||||||    
T  24503915 atcagagccctagacactttgagccacc 24503942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 31754974 - 31755198
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaag 108  Q
    ||||| |||||| |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||||| |||||| | |    
T  31754974 acatccttcaag-tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatctttggcataga-g 31755071  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgt 206  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||   |   | |||||||||||||  ||||    
T  31755072 ccttatcaacataaattcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgt 31755170  T
Q  207 atcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||||||||    
T  31755171 atcagagccctagacactttgagccacc 31755198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 25036747 - 25036527
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatc--aaacaacaaca---accgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| |||||  ||||||||||||||||||||||| |||||||||  |||||||||||   || ||||||| |||| ||| ||||||||||||| ||||    
T  25036747 acatccttcaaagtcatcattaattttgcagcggaa-atttgcatcgaaaacaacaacagcaactgtttaaatctccgtaattaaatcttggcat-aaag 25036650  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtat 208  Q
    ||||| |||||||| |||||| |   |||||| |||||| |||  | ||||||  |||||||||||||||||  |||  |  || |||||||||||||||    
T  25036649 ccttaacaacataa-ttcaaccaacttagggccacaacatcaagttccaaaataagatacataggaaagaaaacaat--aataattcccatcccacgtat 25036553  T
Q  209 cagagccctaaaaactttgagccacc 234  Q
    |||||||||| | |||||||||||||    
T  25036552 cagagccctagacactttgagccacc 25036527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 28 - 218
Target Start/End: Original strand, 23290469 - 23290665
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||| |||||| |||||||||||| |||     | || ||||| ||||||  ||||||||    ||| |||| ||||||||| ||||| ||||    
T  23290469 catcattaattatgcagcagaatatttgcattaaaagcaaccacgacaactgtttaattctccataaaatcatcctggcttaaaagcctcatcaaaataa 23290568  T
Q  123 gttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
     ||||| |||||||||||| ||| ||||||| | |||||||||||||||| ||| |||| ||| |  ||||||||||||||||||||||||||||||    
T  23290569 attcaaacaacaatagggcaacatcagcaatttccaaaatttgatacataagaatgaaagtaagcattaaaatcccatcccacgtatcagagcccta 23290665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 27211541 - 27211441
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    |||||||||||||| |||||||  ||| ||||||||||||||||||||||| | || |||||||||||||||||||| ||||||| | ||||||||||||    
T  27211541 atagggctacaacaacaatatttcaaaattgatacataggaaagaaattaaacaatgaaatcccatcccacgtatcacagccctagacactttgagccac 27211442  T
Q  234 c 234  Q
    |    
T  27211441 c 27211441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 19715371 - 19715240
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    ||||||||||||||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  |||   || ||    
T  19715371 aatcttggcataaaagccttaacaacagaaattcaacaaccatagggctacatcagcaatattcaaaa-ttgatacataggaataaaggtaa--cattaa 19715275  T
Q  193 atcccatcccacgtatcagagccctaaaaactttg 227  Q
    ||| |||||||||||||||||||||| | ||||||    
T  19715274 atctcatcccacgtatcagagccctagacactttg 19715240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 93 - 227
Target Start/End: Complemental strand, 19719934 - 19719803
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    ||||||||||||||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  |||   || ||    
T  19719934 aatcttggcataaaagccttaacaacagaaattcaacaaccatagggctacatcagcaatattcaaaa-ttgatacataggaataaaggtaa--cattaa 19719838  T
Q  193 atcccatcccacgtatcagagccctaaaaactttg 227  Q
    ||| |||||||||||||||||||||| | ||||||    
T  19719837 atctcatcccacgtatcagagccctagacactttg 19719803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 180
Target Start/End: Original strand, 6031688 - 6031856
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaag 108  Q
    ||||| |||||| |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| ||||| || |||||||| |    
T  6031688 acatccttcaag-tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatttttggcataaa-g 6031785  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||    
T  6031786 ccttatcaacataaattcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaa 6031856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 234
Target Start/End: Complemental strand, 25040854 - 25040634
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatc--aaacaacaa---caaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| |||||  ||||||||||||||||||||||| |||||||||  |||||||||   |||| ||||||| |||| ||| ||||| ||||||| ||||    
T  25040854 acatccttcaaagtcatcattaattttgcagcggaa-atttgcatcgaaaacaacaacagcaactgtttaaatctccgtaattaaatattggcat-aaag 25040757  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtat 208  Q
    ||||| |||||||| |||||| |   |||||| |||||| |||  | ||||||  |||||||||||||||||  |||  |  || |||||||||||||||    
T  25040756 ccttaacaacataa-ttcaaccaacttagggccacaacatcaagttccaaaataagatacataggaaagaaaacaat--aataattcccatcccacgtat 25040660  T
Q  209 cagagccctaaaaactttgagccacc 234  Q
    |||||||||| | |||||||||||||    
T  25040659 cagagccctagacactttgagccacc 25040634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 230
Target Start/End: Original strand, 26883766 - 26883863
Alignment:
Q  134 atagggctacaacagcaatatt-caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    |||||||||||||| || | || ||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||||    
T  26883766 atagggctacaacaacagtgtttcaaaaattgatacataggaaagaaattaatcaacaaaatcccatcccacgtatcagagccctagacactttgagc 26883863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 218
Target Start/End: Original strand, 23297057 - 23297253
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||| |||||| |||||||||||| |||     | || ||||| ||||||  ||||||||    ||| |||| ||||||||| ||||| ||||    
T  23297057 catcattaattatgcagcagaatatttgcattaaaagcaaccacgacaactgtttaattctccataaaatcatcctggcttaaaagcctcatcaaaataa 23297156  T
Q  123 gttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
     ||||| |||||||||||| ||| ||||||| | |||||||||||||||| ||| |||| |||    ||||||||||||||||||||||||||||||    
T  23297157 attcaaacaacaatagggcaacatcagcaatttccaaaatttgatacataagaatgaaagtaagaattaaaatcccatcccacgtatcagagcccta 23297253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 26582315 - 26582415
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||||| ||| |||||||||||||||||||  ||||  || | |||||||| |||||||||||||||||||||| | ||||||||||||    
T  26582315 atagggctacaacagcattatccaaaatttgatacataggactgaaagaaaacaataaaatctcatcccacgtatcagagccctagacactttgagccac 26582414  T
Q  234 c 234  Q
    |    
T  26582415 c 26582415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 21 - 171
Target Start/End: Original strand, 22809420 - 22809571
Alignment:
Q  21 tcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaaca 119  Q
    |||| ||||||||| |||| |||||||||||||  ||||||| |||||||||| ||||||| ||||||||  || || |||||||||||||||| || ||    
T  22809420 tcaaaatcatcatttatttagcagcggaatattctcatcaaaacaacaacaactgtttaaacctccataataaattcctggcataaaagccttaacatca 22809519  T
Q  120 taagttcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
    ||| | ||||||  ||||||||||| ||||||   ||||||| |||||||||    
T  22809520 taaatccaacaaacatagggctacatcagcaagtctcaaaatatgatacata 22809571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 29280517 - 29280658
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    |||||||||||||||| | |||||||||  |||||  || | ||||||||| ||||||||||  ||| |||||||||||||||||| | || | ||||||    
T  29280517 tcttggcataaaagccatttcaacataaaattcaatcaccaaagggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaaa 29280616  T
Q  194 -tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
     ||||||||||||||||||||||||| | ||| |||||||||    
T  29280617 atcccatcccacgtatcagagccctagacactgtgagccacc 29280658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 9098 - 9238
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||||| |||| | |||||||||  |||||  || | ||||||||| || |||||||  ||| |||||||||||||||||| | || | ||||||    
T  9098 tcttggcataagagccatttcaacataaaattcaatcaccaaagggctacatcatcaatatttcaaaattgatacataggaaagaattcaaacaataaaa 9197  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | ||| |||||||||    
T  9198 tcccatcccacgtatcagagccctagacactgtgagccacc 9238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 234
Target Start/End: Complemental strand, 5707548 - 5707450
Alignment:
Q  135 tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||| || ||  ||||||||||||||||| || ||||| || | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  5707548 tagggctacaacatcattaaccaaaatttgatacatag-aatgaaataaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 5707450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 19791838 - 19791761
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
    ||||||||||||||||||||| ||||| || ||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  19791838 aatcttggcataaaagccttaacaacagaaattcaacaaccatagggctacatcagcaatattcaaaa-ttgatacata 19791761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 24942990 - 24943130
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacata-ggaaagaaattaatcgataa- 191  Q
    ||||||||||||||||| ||||| | || ||||| |||||||||||||||| |||| || |||||||||||||||||| |||| |||| |||   ||||     
T  24942990 tcttggcataaaagcctcatcaa-agaacttcaaacaacaatagggctacatcagccattttcaaaatttgatacataaggaatgaaaataa---ataag 24943085  T
Q  192 aatcccatccc--acgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||  |||||||||||||||| | |||||||||||||    
T  24943086 aatcccatcccgtacgtatcagagccctagacactttgagccacc 24943130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 23169830 - 23169746
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||  || | |||||||| ||||| || |||||||||||||    
T  23169830 atagggctacaacagcattatccaaaatttgatacataggaatgaaagaaaacaataaaatcacatccaacatatcagagcccta 23169746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 23581087 - 23581003
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||  || | |||||||| ||||| || |||||||||||||    
T  23581087 atagggctacaacagcattatccaaaatttgatacataggaatgaaagaaaacaataaaatcacatccaacatatcagagcccta 23581003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 27785349 - 27785432
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | |||||||||||||||||||||||||||||||    
T  27785349 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaataaaatcccatcccacgtatcagagcccta 27785432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 27790570 - 27790653
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | |||||||||||||||||||||||||||||||    
T  27790570 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaataaaatcccatcccacgtatcagagcccta 27790653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 12571965 - 12572048
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | || ||||||||||||||||||||||||||||    
T  12571965 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaatgaaatcccatcccacgtatcagagcccta 12572048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 12578447 - 12578530
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| || ||  ||||||||||||||||| || ||| |||| | || ||||||||||||||||||||||||||||    
T  12578447 atagggctacaacaacattaaccaaaatttgatacatag-aatgaatttaaacaatgaaatcccatcccacgtatcagagcccta 12578530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 21133998 - 21133808
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| | || |||||||||||||  ||||||| || |||||||  |||||| ||||| ||  | ||||||||||||| |||||| |||||||| |    
T  21133998 atcatcatttaattagcagcggaatattatcatcaaaacatcaacaactctttaaacctccaaaataatatcttggcataaa-gccttaacaacataa-t 21133901  T
Q  125 tcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata--aaatcccatcccacgtatcagagcccta 218  Q
    ||||| |  ||||||| |||||| |||  | ||||||  ||||||||||||||||   || | |||  || |||||||||||||||||||||||||    
T  21133900 tcaaccaacatagggccacaacatcaagttccaaaataagatacataggaaagaa---aaacaataataattcccatcccacgtatcagagcccta 21133808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 15 - 102
Target Start/End: Complemental strand, 23029688 - 23029598
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatca----aacaacaacaaccgtttaaaactccataactaaatcttggca 102  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||    ||||||| ||||  |||||| |||||||| ||||||||||||    
T  23029688 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaagacaacaacagcaactatttaaatctccataattaaatcttggca 23029598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 23877480 - 23877581
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgat-aaaatcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    ||||||||||||| ||| | |||||||||||||||||||||| ||||   |   || ||||||||||||||||| ||| ||||||| | |||||||||||    
T  23877480 atagggctacaacggcattgttcaaaatttgatacataggaatgaaagacacatataaaaatcccatcccacgtgtcacagccctagacactttgagcca 23877579  T
Q  233 cc 234  Q
    ||    
T  23877580 cc 23877581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 36800017 - 36800171
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaac-tccataactaaatcttggcataaaagccttatcaacataag 123  Q
    ||||||||| | || |||||||||||||  ||||||| || ||||||| ||||||||| |||| ||  | ||||||||||||| |||||| ||||||||     
T  36800017 atcatcatttacttagcagcggaatattatcatcaaaacatcaacaactgtttaaaacctccaaaagaatatcttggcataaa-gccttaacaacataa- 36800114  T
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    |||||| |  ||||||| |||||| |||  | ||||||  |||||||||||||||||    
T  36800115 ttcaaccaacatagggccacaacatcaagttccaaaataagatacataggaaagaaa 36800171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 132
Target Start/End: Complemental strand, 22797279 - 22797208
Alignment:
Q  61 aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaac 132  Q
    |||||||||||| ||||||| ||||||||   ||||||||||||||||||| ||||| |||| || ||||||    
T  22797279 aacaacaacaactgtttaaatctccataaaataatcttggcataaaagcctcatcaagataaatttaacaac 22797208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 23102995 - 23102892
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa----tcccatcccacgtatcagagccctaaaaactttgag 229  Q
    ||||||||||||||||| |||||||  ||||||||||||||| ||||   |   ||||||    ||||||||||||||||||||||||| | ||||||||    
T  23102995 atagggctacaacagcattattcaag-tttgatacataggaatgaaaggcacatataaaaataatcccatcccacgtatcagagccctagacactttgag 23102897  T
Q  230 ccacc 234  Q
    |||||    
T  23102896 ccacc 23102892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 218
Target Start/End: Complemental strand, 27368238 - 27368063
Alignment:
Q  41 gcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaataggg 139  Q
    |||||||||||||  ||||||| || ||||||| ||||||  ||||| ||  | ||||||||||||| |||||| |||||||| |||||| |  ||||||    
T  27368238 gcagcggaatattatcatcaaaacatcaacaactgtttaagcctccaaaataatatcttggcataaa-gccttaacaacataa-ttcaaccaacataggg 27368141  T
Q  140 ctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata--aaatcccatcccacgtatcagagcccta 218  Q
    | |||||| |||  | ||||||  ||||||||||||||||   || | |||  || |||||||||||||||||||||||||    
T  27368140 ccacaacatcaagttccaaaataagatacataggaaagaa---aaacaataataattcccatcccacgtatcagagcccta 27368063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 180
Target Start/End: Original strand, 43692848 - 43693001
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| | || |||||||||||||  ||||||| || ||||||| ||||||| ||||| ||  | |||||||||| |||||||||  ||||||| |    
T  43692848 atcatcatttaattagcagcggaatattatcatcaaaacatcaacaactgtttaaacctccaaaataatatcttggcat-aaagccttaagaacataa-t 43692945  T
Q  125 tcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    ||||| |  ||||||| |||||| |||  | ||||||  |||||||||||||||||    
T  43692946 tcaaccaacatagggccacaacatcaagttccaaaataagatacataggaaagaaa 43693001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Complemental strand, 27296505 - 27296429
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||| |||||||||||| | |||||||| | ||||| |||||||||||||||||||| |||| | |||||||||||||    
T  27296505 caaaaattgatacataggta-gaaattaaactataaa-tcccatcccacgtatcagagtcctagacactttgagccacc 27296429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 14 - 117
Target Start/End: Complemental strand, 25108128 - 25108020
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa--caacaacaac----cgtttaaaactccataactaaatcttggcataaaa 107  Q
    ||||| ||||| | |||||||||||| ||||||||||||||||||||||  ||||||||||     ||||||  ||||||||    ||||||||||||||    
T  25108128 acatccttcaaaaacatcattaattt-gcagcggaatatttgcatcaaaagcaacaacaacaacatgtttaattctccataaaatcatcttggcataaaa 25108030  T
Q  108 gccttatcaa 117  Q
    ||||||||||    
T  25108029 gccttatcaa 25108020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 8688294 - 8688340
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaaa 62  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||||    
T  8688294 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaaa 8688340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 167
Target Start/End: Complemental strand, 19650211 - 19650137
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgata 167  Q
    ||||||||||||||||| | ||||||||||||||| ||  || |||||||||||| |||  |||||||| |||||    
T  19650211 tcttggcataaaagcctcaacaacataagttcaaccactaaaaagggctacaacatcaagtttcaaaatatgata 19650137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 19655003 - 19654925
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||| |||||||||||| | ||||||||||||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  19655003 tcttagcataaaagcctcaacaacataagttcaaccactaaagagggctacaacatcaagtttcaaaatatgatacata 19654925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 28971965 - 28971874
Alignment:
Q  61 aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaa 151  Q
    |||||||||||| ||||||  |||||| |    ||| |||||||||||||| ||||| |||| ||||| |||||||||||||||| ||||||    
T  28971965 aacaacaacaactgtttaattctccatcaagttatcctggcataaaagcctcatcaaaataaattcaaacaacaatagggctacatcagcaa 28971874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 200155 - 200232
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  200155 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 6744987 - 6744910
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  6744987 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 6744910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Original strand, 21906780 - 21906878
Alignment:
Q  36 attttgcagcggaatatttgcatcaa----acaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaa 131  Q
    |||||||||| |||||||||||||||    ||||||| ||| ||||||  ||||||||  | |||||||||||||||||| ||||| |||| | ||||||    
T  21906780 attttgcagcagaatatttgcatcaaaacgacaacaataacggtttaatcctccataa-aatatcttggcataaaagcctcatcaaaataaatccaacaa 21906878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Original strand, 4077039 - 4077068
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaaa 220  Q
    ||||||||||||||||||||||||||||||    
T  4077039 aaatcccatcccacgtatcagagccctaaa 4077068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Complemental strand, 11360809 - 11360780
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaaa 220  Q
    ||||||||||||||||||||||||||||||    
T  11360809 aaatcccatcccacgtatcagagccctaaa 11360780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 84; Significance: 5e-40; HSPs: 4)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 16100 - 15889
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaacaacaac----aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    |||||||||| | || |||||||||||  |||||| ||||||     ||| |||| |||||||| ||  || ||||||||||||| ||||| || |||||    
T  16100 tcatcattaaatctggagcggaatattctcatcaatcaacaattcataactgttttaaactccaaaataaattcttggcataaaaaccttaacatcataa 16001  T
Q  123 gttc-aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaa 221  Q
      || |||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||| |     
T  16000 aatccaacatcaataggtctacaacagcaatattcaaaatttgatacataggaa-gaaattaaacaataaaatcccatcccacgtatcagagccctagac 15902  T
Q  222 actttgagccacc 234  Q
    |||||||||||||    
T  15901 actttgagccacc 15889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 127 - 213
Target Start/End: Complemental strand, 11113 - 11028
Alignment:
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagag 213  Q
    |||| |||||||||| ||||| ||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  11113 aacatcaatagggctgcaacaacaatattcaaaatttgatacatagg-aagaaattaaacaataaaatcccatcccacgtatcagag 11028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 13483 - 13624
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatatt-caaaatttgatacataggaaagaaattaatcgataaa 192  Q
    |||||||||||||||| | |||||||||  |||||  || | ||||||||| |||||||||| ||||| ||||||||||||||||||   || | |||||    
T  13483 tcttggcataaaagccatttcaacataaaattcaattaccaaagggctacatcagcaatatttcaaaaattgatacataggaaagaatacaagcaataaa 13582  T
Q  193 atcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||||| | ||| |||||||||    
T  13583 atcccatcccacgtatcagagccctagacactgtgagccacc 13624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 92 - 218
Target Start/End: Complemental strand, 14157 - 14027
Alignment:
Q  92 aaatcttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgat 189  Q
    |||||||||||||||||||| | | |||||| |||||||||  ||||||||||||||| |||  | |||||||||||||||||||| |||| ||| |  |    
T  14157 aaatcttggcataaaagcctcaacgacataaattcaacaaccaaatagggctacaacatcaagttccaaaatttgatacataggaatgaaagtaaacatt 14058  T
Q  190 aaaatcccatccc--acgtatcagagcccta 218  Q
    |||||||||||||  |||||||| |||||||    
T  14057 aaaatcccatcccgtacgtatcaaagcccta 14027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 84; Significance: 5e-40; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 180
Target Start/End: Original strand, 37330 - 37498
Alignment:
Q  15 catcattcaagatcatcattaattttgcagcggaatatttgcatcaa-acaacaa---caaccgtttaaaactccataactaaatcttggcataaaagcc 110  Q
    |||| ||||| |||||||||||||||||||||||| ||||||||||| |||| ||   || |  |||||| |||| ||| ||||||||||||||||||||    
T  37330 catccttcaaaatcatcattaattttgcagcggaa-atttgcatcaatacaataatatcatctatttaaatctccttaattaaatcttggcataaaagcc 37428  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    |||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||| ||||    
T  37429 ttatcaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaatgaaa 37498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 41 - 180
Target Start/End: Complemental strand, 102344 - 102208
Alignment:
Q  41 gcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggc 140  Q
    |||||||||||||  ||||||| | |||||||  | |||||||||| | | | |||||||||| ||||||| | ||||||||  ||||| |  |||||||    
T  102344 gcagcggaatattatcatcaaatatcaacaactatctaaaactccaaagcaatatcttggcat-aaagcctcaacaacataa--tcaaccaacatagggc 102248  T
Q  141 tacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
     | |||| |||  | ||||| |||||||||||||||||||    
T  102247 cataacatcaagttccaaaaattgatacataggaaagaaa 102208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1684 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold1684
Description:

Target: scaffold1684; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 127 - 233
Target Start/End: Original strand, 1124 - 1230
Alignment:
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaacttt 226  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||||| | |||||    
T  1124 aacatcaatagggctacaacatcaatattcaaaatttgatacataggaaagaaattaagcaataaaatcccatcccacgtatcagaaccctagacacttt 1223  T
Q  227 gagccac 233  Q
    |||||||    
T  1224 gagccac 1230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0742 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0742
Description:

Target: scaffold0742; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 74 - 234
Target Start/End: Original strand, 3250 - 3410
Alignment:
Q  74 gtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    |||| |||||||||||  || ||||||||| ||||||||| || |||||  || |||| || ||||||||||||||||||||||||| ||||||||| ||    
T  3250 gttttaaactccataataaattcttggcatgaaagccttaacatcataaaatccaacatcagtagggctacaacagcaatattcaaa-tttgatacaaag 3348  T
Q  173 gaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||| |||||||||||||||||||||| | |||||||||||||    
T  3349 gaaagaaattaaacaataaaatctcatcccacgtatcagagccctagacactttgagccacc 3410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0506 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0506
Description:

Target: scaffold0506; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 8020 - 8166
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat 185  Q
    |||| |||||||||||||||||| |||| |||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||  ||  | |     
T  8020 ataattaaatcttggcataaaagtcttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaatttgatacataggaataaaggtga- 8118  T
Q  186 cgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
      || |||||||||||||||||||||||||||| | |||||||||||||    
T  8119 -cattaaatcccatcccacgtatcagagccctagacactttgagccacc 8166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 51556 - 51395
Alignment:
Q  74 gtttaaaactccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    |||| |||||||||||  || ||||||||| ||||||||| || |||||  || |||| || ||||||||||||| ||||||||||||||||||||||||    
T  51556 gttttaaactccataataaattcttggcatgaaagccttaacatcataaaatccaacatcagtagggctacaacaacaatattcaaaatttgatacatag 51457  T
Q  173 gaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | | ||| | ||||||||||||||||||||||| | |||||||||||||    
T  51456 gaaagaaattaaacaacaaatttccatcccacgtatcagagccctagacactttgagccacc 51395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 76; Significance: 3e-35; HSPs: 4)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 49825 - 49627
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||||||||||||||||||||||| |||     |||| ||||| ||||||  ||||||||    ||| |||||||||||||| ||||| ||||    
T  49825 catcattaattttgcagcggaatatttgcattaaaagcaacaacgacaacggtttaattctccataaaatcatcctggcataaaagcctcatcaaaataa 49726  T
Q  123 gttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
     ||||| |||||||||||||||| ||||||| | |||||||||||||||||||| |||| ||| |  ||||||||||||||  ||||||||||||||||    
T  49725 attcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaagtaagcattaaaatcccatcccgtacgtatcagagcccta 49627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 57358 - 57160
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||||||||||||||||||||||| |||     |||| ||||| ||||||  ||||||||    ||| |||||||||||||| ||||| ||||    
T  57358 catcattaattttgcagcggaatatttgcattaaaagcaacaacgacaacggtttaattctccataaaatcatcctggcataaaagcctcatcaaaataa 57259  T
Q  123 gttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
     | ||| |||||||||||||||| ||||||| | |||||||||||||||||||| |||| ||| |  ||||||||||||||  ||||||||||||||||    
T  57258 atgcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaagtaagcattaaaatcccatcccgtacgtatcagagcccta 57160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 38231 - 38033
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa--caacaa---caaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    |||||||||||||||||||||||||||| || |||  ||||||   ||||  |||||  ||||||||    ||| | |||||||||||| ||||| ||||    
T  38231 catcattaattttgcagcggaatatttggattaaaagcaacaatgacaacgatttaattctccataaaattatcctagcataaaagcctcatcaaaataa 38132  T
Q  123 gttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
     ||||| ||||||||||| |||| || |||| | |||||||||||||||||||| |||| ||| |  |||||||| |||||  ||||||||||||||||    
T  38131 attcaaacaacaatagggttacatcaacaatttccaaaatttgatacataggaatgaaagtaagcattaaaatccaatcccgtacgtatcagagcccta 38033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 218
Target Start/End: Complemental strand, 179604 - 179550
Alignment:
Q  164 gatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||||| | ||   |||||||| ||||||||||||||||||||||    
T  179604 gatacataggaaagaattaaaataataaaatctcatcccacgtatcagagcccta 179550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 74; Significance: 4e-34; HSPs: 3)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 63459 - 63334
Alignment:
Q  94 atcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    |||||||||| ||||||  |||||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||| |||| | |||||    
T  63459 atcttggcatgaaagccacatcaacataaattcaaacatcaatagggctacaacagcaatattcaaaaattgatacataggaaagaagttaagcaataaa 63360  T
Q  193 atcccatcccacgtatcagagcccta 218  Q
     |||||||||||||||||| ||||||    
T  63359 ttcccatcccacgtatcagtgcccta 63334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 94 - 218
Target Start/End: Complemental strand, 64156 - 64031
Alignment:
Q  94 atcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    |||||||||| ||||||  |||||||||| ||||| || ||||||||||||||||||||||||||||| ||| |||||||||||||| |||| | | |||    
T  64156 atcttggcatgaaagccacatcaacataaattcaaacatcaatagggctacaacagcaatattcaaaaattggtacataggaaagaagttaagcaagaaa 64057  T
Q  193 atcccatcccacgtatcagagcccta 218  Q
     || ||||||||||||||||||||||    
T  64056 ttctcatcccacgtatcagagcccta 64031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 81032 - 80893
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||| |||||| | |||||||||  |||||  |||| ||||||||| ||||||||||  |||  ||||||||||||||||| | || | ||||||    
T  81032 tcttggcatgaaagccatttcaacataaaattcaatcacaa-agggctacatcagcaatatttcaaaaatgatacataggaaagaattcaagcaataaaa 80934  T
Q  194 tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||||||||||||| | ||| |||||||||    
T  80933 tcccatcccacgtatcagagccctagacactgtgagccacc 80893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 86 - 234
Target Start/End: Original strand, 27470 - 27617
Alignment:
Q  86 ataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaat 185  Q
    |||| ||||||||||||||||| ||||| |||||||| ||||||||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  | |     
T  27470 ataattaaatcttggcataaaaaccttaacaacataaattcaacaaccatagggctacatcagcaatattcaaaaattgatacataggaataaaggtga- 27568  T
Q  186 cgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |  ||||||| |||||||||||||||||| ||||| |||||||||||||    
T  27569 cattaaaatctcatcccacgtatcagagcgctaaacactttgagccacc 27617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1555 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold1555
Description:

Target: scaffold1555; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 61 - 180
Target Start/End: Original strand, 15 - 134
Alignment:
Q  61 aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaa 160  Q
    |||||||||||| ||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||||| ||| ||||||  |||||||||||||||    
T  15 aacaacaacaactgtttaaatctccataattaaatcttggcataaaaaccttatcaacataaattcaacaaccatatggctacgtcagcaatattcaaaa 114  T
Q  161 tttgatacataggaaagaaa 180  Q
     |||||| ||||||| ||||    
T  115 attgatatataggaatgaaa 134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0326
Description:

Target: scaffold0326; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 969 - 866
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacatagg-aaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||||||| |  ||||||||    
T  969 caatagggctacaacagcaatattcaaaatttgatacataggaaaagaaattaagcaataaaatctcatcccacgtatcagagccctagaccctttgagc 870  T
Q  231 cacc 234  Q
    ||||    
T  869 cacc 866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0326; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 234
Target Start/End: Complemental strand, 16789 - 16686
Alignment:
Q  132 caatagggctacaacagcaatattcaaaatttgatacatagg-aaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||| | |||||||| |||||||||||||||||||||| |  ||||||||    
T  16789 caatagggctacaacaacaatattcaaaatttgatacataggaaaagaaattaagcaataaaatctcatcccacgtatcagagccctagaccctttgagc 16690  T
Q  231 cacc 234  Q
    ||||    
T  16689 cacc 16686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 68; Significance: 2e-30; HSPs: 3)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 17116 - 17219
Alignment:
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaacttt 226  Q
    |||| |||||||||||||||| |||||||| |||||||||||||||||||||| |||| | ||||| ||||||||||||||||||||||||| | |||||    
T  17116 aacatcaatagggctacaacaacaatattccaaatttgatacataggaaagaagttaagcaataaactcccatcccacgtatcagagccctagacacttt 17215  T
Q  227 gagc 230  Q
    ||||    
T  17216 gagc 17219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 33942 - 34166
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatc-ttggcataaaag 108  Q
    ||||| |||||| |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||| |||||||| | |    
T  33942 acatccttcaag-tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaaaagtttaaatctccataattaaatcattggcataga-g 34039  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgt 206  Q
    |||||||||||||| ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||   |   | |||||||||||||  ||||    
T  34040 ccttatcaacataaattcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgt 34138  T
Q  207 atcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||||||||    
T  34139 atcagagccctagacactttgagccacc 34166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 176
Target Start/End: Original strand, 23639 - 23688
Alignment:
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaa 176  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  23639 aacatcaatagggctacaacaacaatattcaaaatttgatacataggaaa 23688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 28 - 218
Target Start/End: Original strand, 369953 - 370151
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||||||||||||||||||||||| |||     |||| ||||| ||||||  || |||||    ||| |||||||||||||| ||||| ||||    
T  369953 catcattaattttgcagcggaatatttgcattaaaagcaacaacgacaacagtttaattctacataaaatcatcctggcataaaagcctcatcaaaataa 370052  T
Q  123 gttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
     ||||| |||||||||||||||| ||||||| | |||||||||||||||||||| |||| ||| |  ||||||||||||||  ||| ||||||||||||    
T  370053 attcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaagtaagcattaaaatcccatcccgtacgcatcagagcccta 370151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 28 - 218
Target Start/End: Complemental strand, 7917 - 7719
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa--caaca---acaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||||||||||||||||||||||| |||  |||||   ||| | ||||||  ||||||||    ||| |||||||||||||| ||||| || |    
T  7917 catcattaattttgcagcggaatatttgcattaaaagcaacatagacagctgtttaattctccataaaatcatcctggcataaaagcctcatcaaaatta 7818  T
Q  123 gttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
     ||||| |||||||||||||||| ||||||| | |||||||||||||||||||| |||| ||| |  ||||||||||||||  ||||||||||||||||    
T  7817 attcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaagtaagcattaaaatcccatcccgtacgtatcagagcccta 7719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516 (Bit Score: 66; Significance: 3e-29; HSPs: 2)
Name: scaffold0516
Description:

Target: scaffold0516; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 8330 - 8550
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatc--aaacaacaa---caaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||||  |||||||||   |||| ||||||| |||| ||| ||||||||||||| ||||    
T  8330 acatccttcaaaatcatcattaattttgcagcggaa-atttgcatcgaaaacaacaacagcaactgtttaaatctccgtaattaaatcttggcat-aaag 8427  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtat 208  Q
    ||||| |||||||| |||||| |   |||||| |||||| |||  | ||||||  |||||||||||||||||  |||  |  || |||||||||||||||    
T  8428 ccttaacaacataa-ttcaaccaacttagggccacaacatcaagttccaaaataagatacataggaaagaaaacaat--aataattcccatcccacgtat 8524  T
Q  209 cagagccctaaaaactttgagccacc 234  Q
    |||||||||| | |||||||||||||    
T  8525 cagagccctagacactttgagccacc 8550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0516; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 178 - 80
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||| || |||||||  ||| |||||||||||||||||| | || | |||||| |||||||||||||| ||||||||| | ||| |||||||||    
T  178 agggctacatcaacaatatttcaaaattgatacataggaaagaattcaagcaataaaaccccatcccacgtattagagccctagacactgtgagccacc 80  T

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Target: scaffold0141 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 234
Target Start/End: Original strand, 32176 - 32388
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||||| |||||| | ||||||||||||||    
T  32176 tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatctttggcataga-gccttatcaacata 32274  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaa 219  Q
    | ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||   |   | |||||||||||||  ||||||||||||||||     
T  32275 aattcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtatcagagccctag 32373  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  32374 acactttgagccacc 32388  T

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Target: scaffold0049 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 27 - 234
Target Start/End: Complemental strand, 82636 - 82424
Alignment:
Q  27 tcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatctt-ggcataaaagccttatcaacata 121  Q
    |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||||| |||||| | ||||||||||||||    
T  82636 tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaatctttggcataga-gccttatcaacata 82538  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagccctaa 219  Q
    | ||||||||| ||||||||||  ||||||||||| |||||||||||||||||| ||||   |   | |||||||||||||  ||||||||||||||||     
T  82537 aattcaacaaccatagggctacgtcagcaatattc-aaatttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgtatcagagccctag 82439  T
Q  220 aaactttgagccacc 234  Q
    | |||||||||||||    
T  82438 acactttgagccacc 82424  T

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Target: scaffold0065 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 98 - 218
Target Start/End: Complemental strand, 28341 - 28222
Alignment:
Q  98 tggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatccc 197  Q
    |||||||||||||| ||||| | ||    |||| ||||||||||||||||||||||||||||| |||||||||||||||| |||||| | ||||| ||||    
T  28341 tggcataaaagcctcatcaagaaaatccaaacatcaatagggctacaacagcaatattcaaaaattgatacataggaaag-aattaagcaataaagtccc 28243  T
Q  198 atcccacgtatcagagcccta 218  Q
    |||||||||||||||||||||    
T  28242 atcccacgtatcagagcccta 28222  T

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Target: scaffold0622 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 110 - 12
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||||||||||| ||| |||||||||||||||||||| ||||  || | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  110 agggctacaacagcattatccaaaatttgatacataggaatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 12  T

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Target: scaffold0512 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0512
Description:

Target: scaffold0512; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 234
Target Start/End: Original strand, 12095 - 12319
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-caacaa---caaccgtttaaaactccataactaaatc-ttggcataaaag 108  Q
    ||||| |||||| |||| ||||| |||||||||||| |||||||||||| |||| |   |||  ||||||| |||||||| |||||  |||||||||| |    
T  12095 acatccttcaag-tcattattaaatttgcagcggaaaatttgcatcaaaacaacgatagcaatagtttaaatctccataattaaataattggcataaa-g 12192  T
Q  109 ccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgt 206  Q
    |||||||||||||| ||||||||| |||| |||||  ||||||||||||||| |||||||||||||| ||||   |   | |||||||||||||  ||||    
T  12193 ccttatcaacataaattcaacaaccatagagctacgtcagcaatattcaaaa-ttgatacataggaatgaaaaacaataagaaaatcccatcccgtacgt 12291  T
Q  207 atcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| | |||||||||||||    
T  12292 atcagagccctagacactttgagccacc 12319  T

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Target: scaffold0323 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0323
Description:

Target: scaffold0323; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 6782 - 6942
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaaccg---tttaaaactccataactaaatcttggcataaaagcc 110  Q
    ||||| ||||| ||| ||||| | ||||||||||||||| | |||||||||||||||||     |||||| |||||||| ||||||||||||||||||||    
T  6782 acatccttcaaaatcttcatttaatttgcagcggaatatgttcatcaaacaacaacaacatctatttaaatctccataattaaatcttggcataaaagcc 6881  T
Q  111 ttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
    ||| || |||||  |||||||| ||||||||||| ||||||   ||||||| |||||||||    
T  6882 ttaacatcataaactcaacaacgatagggctacatcagcaagtctcaaaatatgatacata 6942  T

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Target: scaffold0720 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0720
Description:

Target: scaffold0720; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 4732 - 4631
Alignment:
Q  134 atagggctacaacagcaatatt-caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    |||||||||||||| |||| || ||||||||||||||||||||||||||||||  | |||||||||||||||||| |||||||||| | |||||||||||    
T  4732 atagggctacaacaacaatgtttcaaaatttgatacataggaaagaaattaattaacaaaatcccatcccacgtaacagagccctagacactttgagcca 4633  T
Q  233 cc 234  Q
    ||    
T  4632 cc 4631  T

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Target: scaffold0605 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 8908 - 8767
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    |||||||||||||||| | |||||||||  ||||| || ||| ||||||||| ||||||||||  ||| |||||||||||||||||| | || | |||||    
T  8908 tcttggcataaaagccatttcaacataaaattcaatcaccaaaagggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcaataaa 8809  T
Q  193 atcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||||| | ||| |||||||||    
T  8808 atcccatcccacgtatcagagccctagacactgtgagccacc 8767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 11933 - 11832
Alignment:
Q  134 atagggctacaacagcaatatt-caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    |||||||||||||| || | || |||||||| |||||||||||||||||||||| | ||||||||||||||||||||||||||||| | |||||||||||    
T  11933 atagggctacaacaacagtgtttcaaaatttaatacataggaaagaaattaatcaacaaaatcccatcccacgtatcagagccctagacactttgagcca 11834  T
Q  233 cc 234  Q
    ||    
T  11833 cc 11832  T

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Target: scaffold0008 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 92 - 218
Target Start/End: Original strand, 29156 - 29284
Alignment:
Q  92 aaatcttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgat 189  Q
    |||||||||||||||||||| | | |||||| |||||||||  ||||||||||||| | |||  | |||||||||||||||||||| |||| ||| |  |    
T  29156 aaatcttggcataaaagcctcaacgacataaattcaacaaccaaatagggctacaatatcaagttccaaaatttgatacataggaatgaaagtaaacatt 29255  T
Q  190 aaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||||||||||||||||||    
T  29256 aaaatcccatcccacgtatcagagcccta 29284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 62; Significance: 6e-27; HSPs: 4)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 215
Target Start/End: Original strand, 95385 - 95578
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag 123  Q
    ||||||||||| |||||||||||||||||| |     |||||||||||| |||||   |||||||| ||||||||||||||||||||| | ||||||||     
T  95385 atcattaattt-gcagcggaatatttgcattaaaagcaacaacaacaactgtttagttctccataa-taaatcttggcataaaagcctcaacaacataaa 95482  T
Q  124 ttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcc 215  Q
    |||||||||  || |||||||||||| |||  | |||||||||||| ||||||| |||| ||| |  ||||||||||||||  |||||||||||||    
T  95483 ttcaacaaccaaaaagggctacaacatcaagttccaaaatttgatagataggaatgaaagtaagcattaaaatcccatcccgtacgtatcagagcc 95578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 488768 - 488868
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||||| ||| ||||| |||||||||||||| ||||  || | ||||||||||||||||||||||||||||||| | ||||||||||||    
T  488768 atagggctacaacagcattatccaaaaattgatacataggaatgaaagaaaacaataaaatcccatcccacgtatcagagccctagacactttgagccac 488867  T
Q  234 c 234  Q
    |    
T  488868 c 488868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 494521 - 494420
Alignment:
Q  134 atagggctacaacagcaatatt-caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    |||||||||||||| || | || ||||| ||||||||||||||||||||||||  | ||||||||||||||||||||||||||||| | |||||||||||    
T  494521 atagggctacaacaacagtgtttcaaaaattgatacataggaaagaaattaattaacaaaatcccatcccacgtatcagagccctagacactttgagcca 494422  T
Q  233 cc 234  Q
    ||    
T  494421 cc 494420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 94 - 234
Target Start/End: Complemental strand, 175140 - 174999
Alignment:
Q  94 atcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    |||||||||||||||||| | | | | || | ||||||  |||||||||||| | ||  || |||||||||||||||||||| ||||  || | ||||||    
T  175140 atcttggcataaaagcctcaactagaaaaatccaacaaacatagggctacaatatcatcatccaaaatttgatacataggaatgaaagaaaacaataaaa 175041  T
Q  194 -tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
     || |||||||||||||||||||||| | |||||||||||||    
T  175040 atctcatcccacgtatcagagccctagacactttgagccacc 174999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1405 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold1405
Description:

Target: scaffold1405; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 1747 - 1847
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    |||||||||||||| |||||||  ||| ||||||||||||||||||||||| | | ||||||||||||||||||||||||||||| | || |||||||||    
T  1747 atagggctacaacaacaatatttcaaaattgatacataggaaagaaattaagcaacaaaatcccatcccacgtatcagagccctagacaccttgagccac 1846  T
Q  234 c 234  Q
    |    
T  1847 c 1847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 10169 - 10069
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||||| ||| |||||||||||||||||||| |||| ||||   ||||||| |||||||||||||||||||||| | ||||||||||||    
T  10169 atagggctacaacagcattatccaaaatttgatacataggaatgaaagtaatttttaaaatctcatcccacgtatcagagccctagacactttgagccac 10070  T
Q  234 c 234  Q
    |    
T  10069 c 10069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0377 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0377
Description:

Target: scaffold0377; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 94 - 218
Target Start/End: Original strand, 6861 - 6987
Alignment:
Q  94 atcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaat-ttgatacataggaaagaaattaatcgataa 191  Q
    |||||||||| ||||||  |||||||||| ||||| || |||||||||||||||| ||||||||||||  |||||||||||||||||| |||| | ||||    
T  6861 atcttggcatgaaagccacatcaacataaattcaaacatcaatagggctacaacaacaatattcaaaaaattgatacataggaaagaagttaagcaataa 6960  T
Q  192 aatcccatcccacgtatcagagcccta 218  Q
    ||| | ||||||| |||||||||||||    
T  6961 aattctatcccacatatcagagcccta 6987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 93 - 234
Target Start/End: Original strand, 70703 - 70840
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    ||||||||||||||||||| | ||||| || |||| |||| ||||||||||| ||||||||||||||| ||||||||||||||  ||  |||   || ||    
T  70703 aatcttggcataaaagcctaa-caacagaaattcatcaaccatagggctacatcagcaatattcaaaa-ttgatacataggaataaaggtaa--cattaa 70798  T
Q  193 atcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||||| | |||||||||||||    
T  70799 atcccatcccacgtatcagagccctagatactttgagccacc 70840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 15990 - 15890
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||  ||     |||||| |||||||||||||||||||||| | ||||||||||||    
T  15990 atagggctacaacagcattatccaaaatttgatacataggaatgaaagaaacattaaaaatctcatcccacgtatcagagccctagacactttgagccac 15891  T
Q  234 c 234  Q
    |    
T  15890 c 15890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 56; Significance: 2e-23; HSPs: 3)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 95 - 234
Target Start/End: Complemental strand, 5191 - 5052
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaat 194  Q
    ||||||||||||||||| | | | |||| || |||||  ||||||||||| ||||| ||| |||||||||||||||||||| ||||  ||     |||||    
T  5191 tcttggcataaaagcctcaaccagataaattaaacaatcatagggctacagcagcattatccaaaatttgatacataggaatgaaagaaacattaaaaat 5092  T
Q  195 cccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  5091 cccatcccacgtatcagagccctagacactttgagccacc 5052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 18736 - 18609
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    ||||||||||||||||||| ||||| | || ||||| |||||||||||||||| || ||   | |||||||||||||||||||| ||||  || | ||||    
T  18736 aatcttggcataaaagcctcatcaa-agaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaacaagcaataa 18638  T
Q  192 aatcccatccc--acgtatcagagcccta 218  Q
    |||||||||||  ||||||||||||||||    
T  18637 aatcccatcccgtacgtatcagagcccta 18609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 24362 - 24235
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    ||||||||||| ||||||| ||||| | || ||||| ||||||||||||||||||| ||   | |||||||||||||||||||| ||||  || | ||||    
T  24362 aatcttggcatgaaagcctcatcaa-agaaattcaaacaacaatagggctacaacatcatgttccaaaatttgatacataggaatgaaaacaagcaataa 24264  T
Q  192 aatcccatccc--acgtatcagagcccta 218  Q
    |||||||||||  ||||||||||||||||    
T  24263 aatcccatcccgtacgtatcagagcccta 24235  T

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Target: scaffold0811 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0811
Description:

Target: scaffold0811; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 488 - 390
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||| || ||| |||||||||||||||||||| ||||  ||   ||||||||||||||||||||||||||||||| | |||||||||||||    
T  488 agggctacaacatcattatccaaaatttgatacataggaatgaaagaaaataataaaatcccatcccacgtatcagagccctagacactttgagccacc 390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0574 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0574
Description:

Target: scaffold0574; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 6555 - 6398
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaacaacaacaaccg-tttaaaactccataactaaatcttggcataaaagcctt 112  Q
    ||||| ||||| ||||||| |||||| ||||||||||||||||||| |  ||||||||| | |||||  |||||||| |||||| |||||||||||||||    
T  6555 acatccttcaaaatcatcactaatttagcagcggaatatttgcatcga--aacaacaactgttttaatcctccataattaaatc-tggcataaaagcctt 6459  T
Q  113 atcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    | |||||||| |||||| ||  || |||||||||||| ||||  ||||||| |||||||||    
T  6458 aacaacataaattcaaccactaaaaagggctacaacatcaattctcaaaatatgatacata 6398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 55; Significance: 9e-23; HSPs: 3)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 93 - 230
Target Start/End: Complemental strand, 52261 - 52127
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaa 192  Q
    ||||||||||||||||||||| || || || ||||||||| ||||||||||| ||||||||||||||| |||||||||| |||  ||  |||   || ||    
T  52261 aatcttggcataaaagccttaacatcagaaattcaacaaccatagggctacatcagcaatattcaaaa-ttgatacataagaataaaggtaa--cattaa 52165  T
Q  193 atcccatcccacgtatcagagccctaaaaactttgagc 230  Q
    || ||||||||||||||||||||||| | |||||||||    
T  52164 atgccatcccacgtatcagagccctagacactttgagc 52127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 30808 - 30731
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  30808 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 30731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 36209 - 36132
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  36209 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 36132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1311 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold1311
Description:

Target: scaffold1311; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 130 - 234
Target Start/End: Original strand, 1955 - 2058
Alignment:
Q  130 aacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgag 229  Q
    ||||| ||||||||| |||||   | ||||| ||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||| | ||||||||    
T  1955 aacaaaagggctacatcagcatgttccaaaaattgatacataggaaagaaattaaacaataaa-tcccatcccacgtatcagagccctagacactttgag 2053  T
Q  230 ccacc 234  Q
    |||||    
T  2054 ccacc 2058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0730 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0730
Description:

Target: scaffold0730; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 234
Target Start/End: Complemental strand, 4363 - 4197
Alignment:
Q  66 caacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttga 165  Q
    |||||||  |||||||||||| ||| | |||||||||||||||||| | | | |  | |||| |||   ||||||||||||| || ||  ||||||||||    
T  4363 caacaactatttaaaactcca-aacaatatcttggcataaaagcctcaaccagaataattcatcaatcgtagggctacaacatcattaaccaaaatttga 4265  T
Q  166 tacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||| || ||||| || | ||||||||||||||||||||||||||||||| | |||||||||||||    
T  4264 tacatag-aatgaaataaaacaataaaatcccatcccacgtatcagagccctagacactttgagccacc 4197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 97 - 234
Target Start/End: Original strand, 29355 - 29491
Alignment:
Q  97 ttggcataaaagccttatcaacataagttcaacaa-caatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgat-aaaat 194  Q
    ||||||| ||||||| | | |||||| |||||||| ||||||||||||||||| | |||||||||||||||||||||||| |||   || |  | |||||    
T  29355 ttggcattaaagcctcaacgacataa-ttcaacaatcaatagggctacaacagtattattcaaaatttgatacataggaatgaa--gaaacattaaaaat 29451  T
Q  195 cccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||| | |||||||||||||    
T  29452 cccatcccacgtatcagagccctagacactttgagccacc 29491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 28 - 202
Target Start/End: Original strand, 39223 - 39403
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||||||| ||||||| ||||||||||| |||     | || ||||| ||||||  ||||||||    ||| |||| ||||||||| ||||| ||||    
T  39223 catcattaattatgcagcgaaatatttgcattaaaagcaaccacgacaactgtttaattctccataaaatcatcctggcttaaaagcctcatcaaaataa 39322  T
Q  123 gttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc 202  Q
     ||||| |||||||||||||||| ||||||| | |||||||||||||||||||| |||| ||| |  ||||||||||||||    
T  39323 attcaaacaacaatagggctacatcagcaatttccaaaatttgatacataggaatgaaagtaagcattaaaatcccatccc 39403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 53; Significance: 1e-21; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 71883 - 71983
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    |||||||||||||| |||||||  ||| ||||||||||||||||||||||| | |||||||| ||||||| |||||| ||||| | | ||||||||||||    
T  71883 atagggctacaacaacaatatttcaaaattgatacataggaaagaaattaagcaataaaatctcatcccatgtatcaaagcccaagacactttgagccac 71982  T
Q  234 c 234  Q
    |    
T  71983 c 71983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 40 - 117
Target Start/End: Complemental strand, 7300 - 7218
Alignment:
Q  40 tgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaa 117  Q
    |||||||||||||||||||||||     |||||||||| ||||||  ||||||||   ||||||||||||||||||| |||||    
T  7300 tgcagcggaatatttgcatcaaaagcaacaacaacaacggtttaattctccataaagtaatcttggcataaaagcctcatcaa 7218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 92 - 171
Target Start/End: Complemental strand, 18124 - 18043
Alignment:
Q  92 aaatcttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||||||| | ||||||||||||||| ||  || |||||||| ||| |||  |||||||| |||||||||    
T  18124 aaatcttggcataaaagcctcaacaacataagttcaaccactaaaaagggctaccacatcaagtttcaaaatatgatacata 18043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0220 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 135 - 233
Target Start/End: Original strand, 9992 - 10088
Alignment:
Q  135 tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    |||||||||||||||||||||||||| ||||||||||||||  ||  |||   || |||||||||||||||||||||||||||| | ||||||||||||    
T  9992 tagggctacaacagcaatattcaaaaattgatacataggaataaaggtaa--cattaaatcccatcccacgtatcagagccctagacactttgagccac 10088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 218
Target Start/End: Complemental strand, 5760 - 5600
Alignment:
Q  61 aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaa 158  Q
    ||||||||||||  |||||  |||||||| ||||||||||||| ||||||||| |||||||| |||||||||  || | || ||||||| |||  | |||    
T  5760 aacaacaacaacgctttaattctccataa-taaatcttggcattaaagccttaacaacataaattcaacaactaaaaatggttacaacatcaagttccaa 5662  T
Q  159 aatttgatacataggaaagaaattaatcgataaaatcccatcc--cacgtatcagagcccta 218  Q
    ||||||||||||||||| |||| ||| |  |||||||||||||   ||||||||||||||||    
T  5661 aatttgatacataggaatgaaaataagcattaaaatcccatcctgtacgtatcagagcccta 5600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 82 - 195
Target Start/End: Original strand, 7763 - 7876
Alignment:
Q  82 ctccataactaaatcttggcataaaagccttatcaacataagttc-aacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    ||||||||  || ||||||||| ||||||||| || |||||  || |||| ||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  7763 ctccataataaattcttggcatgaaagccttaacatcataaaatccaacatcaataaggctacaacagcaatattcaaaatttgatacatagg-aagaaa 7861  T
Q  181 ttaatcgataaaatc 195  Q
    |||| | ||||||||    
T  7862 ttaagcaataaaatc 7876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 14 - 218
Target Start/End: Complemental strand, 27436 - 27222
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaag 108  Q
    ||||| ||||| | |||||||||||| ||||||||||||||||||||||     |||||| ||| ||||||  ||||||||   ||||||||||||||||    
T  27436 acatccttcaaaaacatcattaattt-gcagcggaatatttgcatcaaaagcaacaacaataactgtttaattctccataaaataatcttggcataaaag 27338  T
Q  109 ccttatcaacataagttcaacaac--aat--agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc-- 202  Q
    ||| ||||| |||| |||||||||  |||  ||||||||| |  ||   | ||||| |||||||||||||| |||| ||| | || ||||||||||||      
T  27337 cctcatcaagataaattcaacaaccaaataaagggctacatccacatgttccaaaaattgatacataggaatgaaaataagcaattaaatcccatcccgt 27238  T
Q  203 acgtatcagagcccta 218  Q
    ||||||||||||||||    
T  27237 acgtatcagagcccta 27222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 135 - 212
Target Start/End: Complemental strand, 1411 - 1334
Alignment:
Q  135 tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcaga 212  Q
    |||||||||||||||| ||| |||||||||||||||||||| ||||  || | |||||||||||||||||||||||||    
T  1411 tagggctacaacagcattatccaaaatttgatacataggaatgaaagaaaacaataaaatcccatcccacgtatcaga 1334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 50; Significance: 9e-20; HSPs: 3)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 38 - 157
Target Start/End: Complemental strand, 1757 - 1636
Alignment:
Q  38 tttgcagcggaata-tttgcatcaaacaacaa-caaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaat 135  Q
    |||||||||||||| |||||||||||  |||| |||| ||| ||| |||||| | |||||||||||||||||||| | ||||||||| |||||  || ||    
T  1757 tttgcagcggaataatttgcatcaaatgacaaacaactgttcaaatctccatgaataaatcttggcataaaagccatttcaacataaattcaatcaccat 1658  T
Q  136 agggctacaacagcaatattca 157  Q
    ||||||||| ||||||||||||    
T  1657 agggctacatcagcaatattca 1636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 234
Target Start/End: Original strand, 131972 - 132113
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatatt-caaaatttgatacataggaaagaaattaatcgataaa 192  Q
    |||||||||||||||| | |||||||||  ||||   || | ||||||||| ||||| |||| ||||| ||||||||||||||||||   || | |||||    
T  131972 tcttggcataaaagccatttcaacataaaattcattcaccaaagggctacatcagcagtatttcaaaaattgatacataggaaagaatacaagcaataaa 132071  T
Q  193 atcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||||||||||| | ||| |||||||||    
T  132072 atcccatcccacgtatcagagccctagacactgtgagccacc 132113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 122
Target Start/End: Complemental strand, 21049 - 20989
Alignment:
Q  62 acaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    ||||||| ||| |||| || ||||||||  || ||||||||||||||||||| ||||||||    
T  21049 acaacaataactgttttaacctccataataaattcttggcataaaagccttaacaacataa 20989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 48691 - 48792
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaa-ttaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    ||||||||||||||||| ||| |||||||||||||||||||| ||||   || | |||||||| |||||| ||||||||||||||| | |||||||||||    
T  48691 atagggctacaacagcattatccaaaatttgatacataggaatgaaagaaaaacaataaaatctcatccctcgtatcagagccctagacactttgagcca 48790  T
Q  233 cc 234  Q
    ||    
T  48791 cc 48792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 138 - 234
Target Start/End: Complemental strand, 16919 - 16823
Alignment:
Q  138 ggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||| ||||||||||  ||| |||||||||||||||||| | || |  |||||||||||||||||||||||||||||| | ||| |||||||||    
T  16919 ggctacatcagcaatatttcaaaattgatacataggaaagaattcaagcagtaaaatcccatcccacgtatcagagccctagacactgtgagccacc 16823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 50088 - 49988
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||||||||| | ||| |||||||||||||||||||| ||||  ||     ||||||||||||||||||||||||||||| | ||||||||||||    
T  50088 atagggctacaacagtattatccaaaatttgatacataggaatgaaagaaacattaaaaatcccatcccacgtatcagagccctagacactttgagccac 49989  T
Q  234 c 234  Q
    |    
T  49988 c 49988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0343 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 95 - 218
Target Start/End: Complemental strand, 737 - 613
Alignment:
Q  95 tcttggcataaaagccttatcaacataag-ttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||||| |||| | |||||||||  |||||  || | || |||||| || |||||||  ||| |||||||||||||||||| | || | ||||||    
T  737 tcttggcataagagccatttcaacataaaattcaatcaccaaagtgctacatcatcaatatttcaaaattgatacataggaaagaattcaaacaataaaa 638  T
Q  194 tcccatcccacgtatcagagcccta 218  Q
    |||||||||||||||||||||||||    
T  637 tcccatcccacgtatcagagcccta 613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 29 - 218
Target Start/End: Original strand, 6473 - 6669
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag 123  Q
    ||||||||||| |||||||||||||||||| |||     |||| ||||| |||||   |||||||| ||||||||||||||||||||| | ||||||||     
T  6473 atcattaattt-gcagcggaatatttgcattaaaagcaacaacgacaactgtttagttctccataa-taaatcttggcataaaagcctcaacaacataaa 6570  T
Q  124 ttcaacaac--aatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagcccta 218  Q
    ||||| |||  || ||||||||||||  ||  | || ||||||||||||||||| |||| ||| |  ||| |||||||| |  ||||||||||||||||    
T  6571 ttcaaaaaccaaaaagggctacaacattaagttccagaatttgatacataggaatgaaagtaagcattaacatcccatctcgtacgtatcagagcccta 6669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 110400 - 110484
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||| ||| ||||||||||||||||||||  ||   || | |||||||||||||||||||||||||||||||    
T  110400 atagggctactacagcattatccaaaatttgatacataggaataaaggaaaacaataaaatcccatcccacgtatcagagcccta 110484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 218
Target Start/End: Original strand, 116435 - 116519
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||| |||||| ||| ||||| ||||||||||||||  ||   || | |||||||||||||||||||||||||||||||    
T  116435 atagggctactacagcattatccaaaaattgatacataggaataaaggaaaacaataaaatcccatcccacgtatcagagcccta 116519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 66 - 217
Target Start/End: Complemental strand, 150 - 1
Alignment:
Q  66 caacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaatagggctacaacagcaatattcaaaatttga 165  Q
    |||||||  |||||||||||| ||| | |||||||||||||||||| | | | |  | |||| |||   ||||||||||||| || ||  ||||||||||    
T  150 caacaactatttaaaactcca-aacaatatcttggcataaaagcctcaaccagaataattcatcaatcgtagggctacaacatcattaaccaaaatttga 52  T
Q  166 tacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccct 217  Q
    ||||||| || ||||| || | ||||||||||||||||||||||||||||||    
T  51 tacatag-aatgaaataaaacaataaaatcccatcccacgtatcagagccct 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 234
Target Start/End: Complemental strand, 3850 - 3742
Alignment:
Q  127 aacaacaatagggctacaacagcaatattcaaaatttgatacata-ggaaagaaattaatcgataa-aatcccatccc--acgtatcagagccctaaaaa 222  Q
    |||||||||||||||||| |||| || |||||||||||||||||| |||| |||| |||   |||| |||||||||||  |||||||||||||||| | |    
T  3850 aacaacaatagggctacatcagccattttcaaaatttgatacataaggaatgaaaataa---ataagaatcccatcccgtacgtatcagagccctagaca 3754  T
Q  223 ctttgagccacc 234  Q
    ||||||||||||    
T  3753 ctttgagccacc 3742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 218
Target Start/End: Complemental strand, 22779 - 22589
Alignment:
Q  26 atcatcattaattttgcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagt 124  Q
    ||||||||| | || |||||||||||||  ||||||| || ||||||| ||||||| ||||| ||  | ||||||||||||| |||||| |||||||| |    
T  22779 atcatcatttaattagcagcggaatattatcatcaaaacatcaacaactgtttaaacctccaaaataatatcttggcataaa-gccttaacaacataa-t 22682  T
Q  125 tcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata--aaatcccatcccacgtatcagagcccta 218  Q
    ||||| |  ||||||| |||||| |||  | ||||||  ||||||||||||||||   || | |||  || |||||||||||||||||||||||||    
T  22681 tcaaccaacatagggccacaacatcaagttccaaaataagatacataggaaagaa---aaacaataataattcccatcccacgtatcagagcccta 22589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 218
Target Start/End: Complemental strand, 19944 - 19769
Alignment:
Q  41 gcagcggaatatttgcatcaaa-caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaacaataggg 139  Q
    |||||||||||||  ||||||| || ||||||| ||||||  ||||| ||  | ||||||||||||| |||||| |||||||| |||||| |  ||||||    
T  19944 gcagcggaatattatcatcaaaacatcaacaactgtttaagcctccaaaataatatcttggcataaa-gccttaacaacataa-ttcaaccaacataggg 19847  T
Q  140 ctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgata--aaatcccatcccacgtatcagagcccta 218  Q
    | |||||| |||  | ||||||  ||||||||||||||||   || | |||  || |||||||||||||||||||||||||    
T  19846 ccacaacatcaagttccaaaataagatacataggaaagaa---aaacaataataattcccatcccacgtatcagagcccta 19769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 459 - 359
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa-tcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    ||||||||||||||||| |||||||  ||||||||||||||| ||||   |   |||||| ||||||||||||||||||||||||| | |||||||||||    
T  459 atagggctacaacagcattattcaag-tttgatacataggaatgaaaggcacatataaaaatcccatcccacgtatcagagccctagacactttgagcca 361  T
Q  233 cc 234  Q
    ||    
T  360 cc 359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 4833 - 4733
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa-tcccatcccacgtatcagagccctaaaaactttgagcca 232  Q
    ||||||||||||||||| |||||||  ||||||||||||||| ||||   |   |||||| ||||||||||||||||||||||||| | |||||||||||    
T  4833 atagggctacaacagcattattcaag-tttgatacataggaatgaaaggcacgtataaaaatcccatcccacgtatcagagccctagacactttgagcca 4735  T
Q  233 cc 234  Q
    ||    
T  4734 cc 4733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0213 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0213
Description:

Target: scaffold0213; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 135 - 184
Target Start/End: Complemental strand, 6454 - 6405
Alignment:
Q  135 tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaa 184  Q
    ||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  6454 tagggctacaacaacaatattctaaatttgatacataggaaagaaattaa 6405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 628 - 528
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccac 233  Q
    ||||||||| ||||||| ||| |||||||||||||||||||| ||||  ||     |||||||||| ||||||||| |||||||| | ||||||||||||    
T  628 atagggctataacagcattatccaaaatttgatacataggaatgaaagaaacattaaaaatcccattccacgtatctgagccctagacactttgagccac 529  T
Q  234 c 234  Q
    |    
T  528 c 528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0947 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 40 - 127
Target Start/End: Complemental strand, 449 - 357
Alignment:
Q  40 tgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttca 127  Q
    |||||||||||||||||||||||     |||||||||| ||||||  ||||||||   ||||||||||||||||||| ||||| |||||||||    
T  449 tgcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaagtaatcttggcataaaagcctcatcaaaataagttca 357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 218
Target Start/End: Complemental strand, 411 - 328
Alignment:
Q  134 atagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    |||||||||||||| |||||||  ||| |||||||||||||| ||| | ||   |||||||||||||||||||||||||||||||    
T  411 atagggctacaacaacaatatttcaaaattgatacataggaa-gaattcaagaaataaaatcccatcccacgtatcagagcccta 328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 3)
Name: scaffold0298
Description:

Target: scaffold0298; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 14084 - 14190
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag 123  Q
    ||||||||||| ||||||||||||||||||||||     |||||||||| ||||||  ||||||||   ||||||||||||||||||| ||||| ||||     
T  14084 atcattaattt-gcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatcttggcataaaagcctcatcaaaataaa 14182  T
Q  124 ttcaacaa 131  Q
    | ||||||    
T  14183 tccaacaa 14190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 17854 - 17960
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag 123  Q
    ||||||||||| ||||||||||||||||||||||     |||||||||| ||||||  ||||||||   ||||||||||||||||||| ||||| ||||     
T  17854 atcattaattt-gcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatcttggcataaaagcctcatcaaaataaa 17952  T
Q  124 ttcaacaa 131  Q
    | ||||||    
T  17953 tccaacaa 17960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0298; HSP #3
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 1295 - 1197
Alignment:
Q  36 attttgcagcggaatatttgcatcaa----acaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaa 131  Q
    |||||||||||||||||||| |||||    ||||||| ||||||||||  ||||||||  | |||||||||||||||||| ||||| |||| | ||||||    
T  1295 attttgcagcggaatatttgtatcaaaacgacaacaataaccgtttaatcctccataa-aatatcttggcataaaagcctcatcaaaataaatccaacaa 1197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 28 - 214
Target Start/End: Complemental strand, 8670 - 8477
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaa-gccttatcaacata 121  Q
    ||||||||||||||||||||||||||||||| |||     |||| ||||| ||||||  ||||||||    ||| | |||||||| |||| ||||| | |    
T  8670 catcattaattttgcagcggaatatttgcattaaaaacaacaacgacaacggtttaattctccataaaattatcctagcataaaaagcctcatcaaga-a 8572  T
Q  122 agttcaacaacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatccc--acgtatcagagc 214  Q
    | |  |||||||||||||||||| || ||   | |||||||||||||||||||| |||| ||| |  ||||||||||||||  ||||||||||||    
T  8571 attcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaagtaaacattaaaatcccatcccgtacgtatcagagc 8477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 28 - 73
Target Start/End: Complemental strand, 23161 - 23117
Alignment:
Q  28 catcattaattttgcagcggaatatttgcatcaaacaacaacaacc 73  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||    
T  23161 catcattaattttgcagcggaatatttgcattaaa-aacaacaacc 23117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2175 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold2175
Description:

Target: scaffold2175; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 131
Target Start/End: Complemental strand, 279 - 185
Alignment:
Q  40 tgcagcggaatatttgcatc-aaacaacaaca---accgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaa 131  Q
    |||||||||||||||| ||| |||||||||||   |||||||||||||||||||  | |||||||||||||||||| ||| | |||| ||||||||    
T  279 tgcagcggaatatttgtatcgaaacaacaacattaaccgtttaaaactccataaa-atatcttggcataaaagcctaatcgaaataaattcaacaa 185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 218
Target Start/End: Complemental strand, 47329 - 47202
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    |||||||||||||| |||| ||||| | || ||||| |||||||||||||||| || ||   | |||||||||||||||||||| |||| ||| | | ||    
T  47329 aatcttggcataaacgcctcatcaa-agaaattcaaacaacaatagggctacatcatcatgttccaaaatttgatacataggaatgaaaataagcaaaaa 47231  T
Q  192 aatcccatccc--acgtatcagagcccta 218  Q
    ||||||||| |  ||||||||||||||||    
T  47230 aatcccatcacttacgtatcagagcccta 47202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Original strand, 37915 - 37992
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  37915 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 37992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 38; Significance: 0.000000000001; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 93 - 218
Target Start/End: Original strand, 64538 - 64666
Alignment:
Q  93 aatcttggcataaaagccttatcaacataagttcaacaacaata-gggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataa 191  Q
    |||||||||||||||| || |||||  ||| |  |||||||||| |||||||| || ||   | |||||||||||||||||||| |||| ||| | || |    
T  64538 aatcttggcataaaagtctcatcaaagtaattcaaacaacaataagggctacatcatcatgttccaaaatttgatacataggaatgaaaataagcaatta 64637  T
Q  192 aatcccatccc--acgtatcagagcccta 218  Q
    |||||||||||  ||||||||||||||||    
T  64638 aatcccatcccgtacgtatcagagcccta 64666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 47645 - 47568
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  47645 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 47568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 53051 - 52974
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  53051 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 52974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0610 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0610
Description:

Target: scaffold0610; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 129
Target Start/End: Original strand, 5058 - 5154
Alignment:
Q  38 tttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaac 129  Q
    ||||||||||||||||||||| |     ||||||||| || ||||||| ||||||||   ||||||||||||||||||| ||||| |||| ||||||    
T  5058 tttgcagcggaatatttgcattaaaagcaacaacaacgactgtttaaatctccataaaataatcttggcataaaagcctcatcaagataaattcaac 5154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 131
Target Start/End: Original strand, 15331 - 15437
Alignment:
Q  29 atcattaattttgcagcggaatatttgcatcaaa-----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataag 123  Q
    ||||||||||| ||||||||||||||||||||||     |||||||||| ||||||  ||||||||   ||||| ||||||||||||| ||||| ||||     
T  15331 atcattaattt-gcagcggaatatttgcatcaaaagcaacaacaacaactgtttaattctccataaaataatctaggcataaaagcctcatcaaaataaa 15429  T
Q  124 ttcaacaa 131  Q
    | ||||||    
T  15430 tccaacaa 15437  T

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Target: scaffold0211 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 29969 - 30045
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    |||||||||||||||||| | |||||||| | ||||| |||||||||||||||||||| | || | |||||||||||||    
T  29969 caaaatttgatacataggta-gaaattaaactataaa-tcccatcccacgtatcagagtcatagacactttgagccacc 30045  T

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Target: scaffold0039 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 156 - 234
Target Start/End: Original strand, 94589 - 94665
Alignment:
Q  156 caaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||| |||||||||||| | |||||||| | ||||| |||||||||||||||||||| |||| | |||||||||||||    
T  94589 caaaaattgatacataggta-gaaattaaactataaa-tcccatcccacgtatcagagtcctagacactttgagccacc 94665  T

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Target: scaffold0355 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 180
Target Start/End: Complemental strand, 2113 - 2028
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac-aatagggctacaacagcaatattcaaaatttgatacataggaaagaaa 180  Q
    |||||||||||||||| | |||||||| |||||| || || |||||||||||| |||  | ||||||  |||||||||||||||||    
T  2113 cttggcataaaagcctcaacaacataaattcaaccactaaaagggctacaacatcaagttccaaaataagatacataggaaagaaa 2028  T

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Target: scaffold0309 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0309
Description:

Target: scaffold0309; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 20413 - 20536
Alignment:
Q  95 tcttggcataaaagccttatcaacataagttcaacaacaa-tagggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaa 193  Q
    ||||||||||||||||| | | |||||| ||||| | ||| || |||||||||| |||  | ||||||||||||||||| || ||||  || |  |||||    
T  20413 tcttggcataaaagcctcaacgacataa-ttcaaaatcaaataaggctacaacatcaagttccaaaatttgatacatagaaatgaaagaaaacattaaaa 20511  T
Q  194 tcccatcccacgtatcagagcccta 218  Q
    |  ||||||||||||||||||||||    
T  20512 tttcatcccacgtatcagagcccta 20536  T

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Target: scaffold0020 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 117
Target Start/End: Complemental strand, 103572 - 103488
Alignment:
Q  36 attttgcagcggaatatttgcatcaa----acaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaa 117  Q
    ||||||||||||||||||||||||||    ||||||| ||||||||||   |||||||  | |||||||||||||||||| |||||    
T  103572 attttgcagcggaatatttgcatcaaaacgacaacaataaccgtttaatcatccataa-aatatcttggcataaaagcctcatcaa 103488  T

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Target: scaffold0634 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 234
Target Start/End: Original strand, 2146 - 2309
Alignment:
Q  70 aaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaaca-atagggctacaacagcaatattcaaaatttgatac 168  Q
    ||||||||||||||| ||||  | |||||||||||||||||| | | | | || |  ||||| | |||||||||||||| ||  || |||||||||||||    
T  2146 aaccgtttaaaactctataaa-atatcttggcataaaagcctcaaccagaaaaatctaacaaaacatagggctacaacatcatcatccaaaatttgatac 2244  T
Q  169 ataggaaagaaattaatcgataaaa-tcccatcccacgtatcagagccctaaaaactttgagccacc 234  Q
    ||||||| |||   || |  ||||| || ||||||| |||||||||||||| | |||||||||||||    
T  2245 ataggaatgaag--aaacattaaaaatctcatcccatgtatcagagccctagacactttgagccacc 2309  T

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Target: scaffold0316 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 61 - 151
Target Start/End: Complemental strand, 147 - 56
Alignment:
Q  61 aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaa-caacaatagggctacaacagcaa 151  Q
    |||||||||||| ||||||  |||||| |    ||| |||||||||||||| ||||| |||| ||||| |||||||||||||||| ||||||    
T  147 aacaacaacaactgtttaattctccatcaaattatcctggcataaaagcctcatcaaaataaattcaaacaacaatagggctacatcagcaa 56  T

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Target: scaffold0061 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 132
Target Start/End: Complemental strand, 57867 - 57768
Alignment:
Q  38 tttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaac 132  Q
    ||||||||||||||||||||| |     |||||||||||  ||||||| ||||||||   |||||||||||||||||||  |||| | || |||||||||    
T  57867 tttgcagcggaatatttgcattaaaagcaacaacaacaattgtttaaatctccataaaataatcttggcataaaagcctcttcaagaaaaattcaacaac 57768  T

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Target: scaffold0017 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 132
Target Start/End: Original strand, 140766 - 140865
Alignment:
Q  38 tttgcagcggaatatttgcatca-----aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaac 132  Q
    ||||||||||||||||||||| |     |||||||||||  ||||||| ||||||||   |||||||||||||||||||  |||| | || |||||||||    
T  140766 tttgcagcggaatatttgcattaaaagcaacaacaacaattgtttaaatctccataaaataatcttggcataaaagcctcttcaagaaaaattcaacaac 140865  T

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Target: scaffold0708 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 96 - 171
Target Start/End: Complemental strand, 95 - 18
Alignment:
Q  96 cttggcataaaagccttatcaacataagttcaacaac--aatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||||||| | |||||||| |||||| ||  || |||||||||||| |||  |||||||| |||||||||    
T  95 cttggcataaaagcctcaacaacataaattcaaccactaaaaagggctacaacaacaagtttcaaaatatgatacata 18  T

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Target: scaffold0461 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 1726 - 1628
Alignment:
Q  36 attttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaa 131  Q
    |||||||||| ||||||||| ||||||    |||||| ||||||||||  ||||||||  | |||||||||||||||||| ||||| |||| | ||||||    
T  1726 attttgcagcagaatatttgtatcaaaacgacaacaataaccgtttaatcctccataaa-atatcttggcataaaagcctcatcaaaataaatccaacaa 1628  T

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Target: scaffold0461; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 8662 - 8564
Alignment:
Q  36 attttgcagcggaatatttgcatcaaa----caacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataagttcaacaa 131  Q
    |||||||||| ||||||||| ||||||    |||||| ||||||||||  ||||||||  | |||||||||||||||||| ||||| |||| | ||||||    
T  8662 attttgcagcagaatatttgtatcaaaacgacaacaataaccgtttaatcctccataaa-atatcttggcataaaagcctcatcaaaataaatccaacaa 8564  T

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Target: scaffold0249 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 218
Target Start/End: Complemental strand, 15356 - 15275
Alignment:
Q  136 agggctacaacagcaatattcaaaatttgatacataggaaagaaattaatcgataaaatcccatcccacgtatcagagcccta 218  Q
    ||||||||||||  ||||||  ||| |||||||||||||| ||||| ||   |  ||||||||||||||||||||||||||||    
T  15356 agggctacaacaataatatttcaaaattgatacataggaa-gaaatcaagaaaataaatcccatcccacgtatcagagcccta 15275  T

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Target: scaffold1340 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold1340
Description:

Target: scaffold1340; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 14 - 70
Target Start/End: Original strand, 1918 - 1975
Alignment:
Q  14 acatcattcaagatcatcattaattttgcagcggaatatttgcatc-aaacaacaaca 70  Q
    ||||| |||||  |||||||||||||| |||||||| ||||||||| |||||||||||    
T  1918 acatccttcaaagtcatcattaattttacagcggaaaatttgcatcaaaacaacaaca 1975  T

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Target: scaffold0126 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 191 - 220
Target Start/End: Complemental strand, 30841 - 30812
Alignment:
Q  191 aaatcccatcccacgtatcagagccctaaa 220  Q
    ||||||||||||||||||||||||||||||    
T  30841 aaatcccatcccacgtatcagagccctaaa 30812  T

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Target: scaffold0060 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 41 - 122
Target Start/End: Original strand, 40768 - 40848
Alignment:
Q  41 gcagcggaatatttgcatcaaacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaacataa 122  Q
    |||||||||||||  ||||||||| ||||||  ||||||| ||||| ||  | |||||||||| ||||||||| ||||||||    
T  40768 gcagcggaatattatcatcaaacatcaacaattgtttaaacctccaaaataatatcttggcat-aaagccttaacaacataa 40848  T

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Target: scaffold2015 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold2015
Description:

Target: scaffold2015; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 171
Target Start/End: Complemental strand, 978 - 930
Alignment:
Q  123 gttcaacaacaatagggctacaacagcaatattcaaaatttgatacata 171  Q
    |||||||||||| | ||||||| |||||  |||||||||||||||||||    
T  978 gttcaacaacaacaaggctacatcagcataattcaaaatttgatacata 930  T

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Target: scaffold0108 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 117
Target Start/End: Original strand, 51143 - 51199
Alignment:
Q  61 aacaacaacaaccgtttaaaactccataactaaatcttggcataaaagccttatcaa 117  Q
    ||||||| |||||||||||  ||||||||  ||||||| |||||||||||| |||||    
T  51143 aacaacatcaaccgtttaatcctccataaaaaaatcttagcataaaagcctcatcaa 51199  T

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Target: scaffold0088 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 25904 - 25856
Alignment:
Q  124 ttcaacaacaatagggctacaacagcaatattcaaaatttgatacatag 172  Q
    |||| |||| |||||||||||||| |||||  |||||||||||||||||    
T  25904 ttcatcaaccatagggctacaacaacaataaccaaaatttgatacatag 25856  T

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