View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6707_low_14 (Length: 382)
Name: NF6707_low_14
Description: NF6707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6707_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 287; Significance: 1e-161; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 287; E-Value: 1e-161
Query Start/End: Original strand, 1 - 368
Target Start/End: Complemental strand, 6031732 - 6031352
Alignment:
| Q |
1 |
ttaggattataacaagggtaaggacctaaagagcaataagttgaaggaaacatttgaagat-------------gaaaaaccctagtttcttgtttcaca |
87 |
Q |
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| T |
6031732 |
ttaggattataacaagggtaaggacctaaagagcaataagttgaaggaaacatttgaagattgactcaaatggagaaaaaccctagtttcttgtttcaca |
6031633 |
T |
|
| Q |
88 |
acnnnnnnngaacaagaggtatatagctatgttcttatgggttatagtgaagtagcttcctaaaaacacctttttacacggatattaattttttagagga |
187 |
Q |
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| T |
6031632 |
acaaaaaaagaacaagaggtatatagctatgttcttatgggttatagtgaagtagcttcctaaaaacacctttttacacggatattaattttttagagga |
6031533 |
T |
|
| Q |
188 |
aattaactacttactagttaaggactatagtgaacctagaagagnnnnnnngtggtttgaaagaaattgatgatgataggtgaatggttttcattttgga |
287 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
6031532 |
aatgaactacttactagttaaggactatagtgaacctagaagagaaaaaaagtggtttgaaagaaattgatgatgataggtgaagggttttcattttgga |
6031433 |
T |
|
| Q |
288 |
caatgatatggaaagtgagatttggtttgcatagtttccattgtaagaagaataagcctccatatttatctgggtgtgatg |
368 |
Q |
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| T |
6031432 |
caatgatatggaaagtgagatttggtttgcatagtttccattgtaagaagaataagcctccatatttatctgggtgtgatg |
6031352 |
T |
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