View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6707_low_26 (Length: 225)
Name: NF6707_low_26
Description: NF6707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6707_low_26 |
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Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 14 - 209
Target Start/End: Original strand, 2036219 - 2036414
Alignment:
| Q |
14 |
acctgtgcaatgtgtaaatattagaagggtgggtagaagaaaacaaataatataaatcgatgccagctatatgtgtttgaactttgttgtaaacgatgca |
113 |
Q |
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| T |
2036219 |
acctgtgcaatgtgtaaatattagaagggtgggtagaagaaaacaaataatataaatcgatgccagctatatgtgtttgaactttgttgtaaacgatgca |
2036318 |
T |
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| Q |
114 |
aacttttctggcattatttatttttaatatatactataaataaattagtatatccccaacattttgaggtgcatatcatgaattagagcacaaaac |
209 |
Q |
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| T |
2036319 |
aacttttctggcattatttatttttaatatatactataaataaattagtatatccccaacattttgaggtgcatatcatgaattagagcacaaaac |
2036414 |
T |
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