View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6708_high_12 (Length: 331)

Name: NF6708_high_12
Description: NF6708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6708_high_12
NF6708_high_12
[»] chr8 (1 HSPs)
chr8 (10-317)||(12588204-12588511)
[»] chr6 (18 HSPs)
chr6 (22-239)||(29733182-29733405)
chr6 (10-203)||(29793640-29793833)
chr6 (10-203)||(28481216-28481410)
chr6 (10-203)||(29697449-29697642)
chr6 (10-228)||(29761191-29761409)
chr6 (23-192)||(29679677-29679846)
chr6 (28-171)||(28491660-28491803)
chr6 (28-171)||(29804070-29804213)
chr6 (26-75)||(27593158-27593207)
chr6 (26-75)||(27677752-27677801)
chr6 (21-93)||(29467809-29467881)
chr6 (50-121)||(26617280-26617351)
chr6 (50-121)||(26635644-26635715)
chr6 (50-121)||(26723208-26723279)
chr6 (50-121)||(26741610-26741681)
chr6 (36-93)||(26959147-26959204)
chr6 (26-75)||(27678946-27678995)
chr6 (26-75)||(27706540-27706589)
[»] scaffold0012 (2 HSPs)
scaffold0012 (11-247)||(241804-242046)
scaffold0012 (29-194)||(214475-214640)
[»] chr3 (1 HSPs)
chr3 (11-215)||(613041-613245)
[»] chr1 (1 HSPs)
chr1 (28-110)||(5924497-5924579)


Alignment Details
Target: chr8 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 10 - 317
Target Start/End: Complemental strand, 12588511 - 12588204
Alignment:
Q  10 gatggacatcatggagtcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttg 109  Q
    ||||| |||| ||||||||||||| |||||||||||||||||||||||||| |  ||||||| || ||||| |||||| ||||||||||  |||||||||    
T  12588511 gatggccatcttggagtcttcaattgctttgagaagtgatggtgtgatttcttcgccttttttaatctccttgtcatccatgaaagttcgaactcctttg 12588412  T
Q  110 tcatcaagagctatcttgagatagcttgtgaaaccatgacgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaattgatctgtgagggaag 209  Q
    ||||| |||||| ||||||||| ||  |||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12588411 tcatctagagctttcttgagattgccagtgaaaccgtagcgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaattgatctgtgagggaag 12588312  T
Q  210 ccatgatgagtgaatgaattagtttgatgattatgaattgcagggtttagagtatctagagtcaaatgataaatgtgggagaaagacacacttttgttgg 309  Q
    |||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12588311 ccatgatgtgtgaatgaattggtttgatgattatgaattgcagagtttacagtatctagagtcaaatgataaatgtgggagaaagacacgcttttgttgg 12588212  T
Q  310 tagtgatg 317  Q
    | ||||||    
T  12588211 tggtgatg 12588204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 137; Significance: 2e-71; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 22 - 239
Target Start/End: Original strand, 29733182 - 29733405
Alignment:
Q  22 ggagtcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgtcatcaagagct 121  Q
    |||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||| || || ||||||||||| |||||||||||||| ||||||    
T  29733182 ggagtcttcaattgctttgagaagtgatggtgtgatttcttcgcctttttgaagctcctcatcgtccatgaaagttctaactcctttgtcatctagagct 29733281  T
Q  122 atcttgagatagcttgtgaaaccatgacgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaattgat------ctgtgagggaagccatga 215  Q
     |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||| |||      ||||||||| ||||||||    
T  29733282 ttcttgagatagcttgtgaaaccataacgagtatcctcacctcgaaagctgagaaaaacatcatacttgaatcgatttgtgactgtgaggggagccatga 29733381  T
Q  216 tgagtgaatgaattagtttgatga 239  Q
    ||||||||||| || |||||||||    
T  29733382 tgagtgaatgagttggtttgatga 29733405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 29793640 - 29793833
Alignment:
Q  10 gatggacatcatggagtcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttg 109  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||||||  ||||||| |||||  || |||||||||||||||| ||| ||||||    
T  29793640 gatggccatcatggagtcttcaattgctttgagaagtgatggtgtgatttcatctccttttttaagcttttcatcatcgatgaaagttcggacccctttg 29793739  T
Q  110 tcatcaagagctatcttgagatagcttgtgaaaccatgacgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaattgatctgtga 203  Q
    |||||||||||| ||||||||| ||  ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  29793740 tcatcaagagctttcttgagattgccagtgaaaccatagcgagtatcctcacctcgaaagctgaggaaaacatcgtacttgaatcgatctgtga 29793833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 28481216 - 28481410
Alignment:
Q  10 gatggacatcatggagtcttcaatagctttgagaagtgatggtgtgatttcat-tccctttttgaagctcctcgtcatcgatgaaagttctgactccttt 108  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||||| ||| ||||| |||||  || |||||||||||||||| ||| |||||    
T  28481216 gatggccatcatggagtcttcaattgctttgagaagtgatggtgtgatttcatctcctttttttaagcttttcatcatcgatgaaagttcggaccccttt 28481315  T
Q  109 gtcatcaagagctatcttgagatagcttgtgaaaccatgacgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaattgatctgtga 203  Q
    ||||||||||||| ||||||||| ||  ||||||||||  |||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  28481316 gtcatcaagagctttcttgagattgccagtgaaaccatagcgagtatcctcacctcgaaagctgaggaaaacatcgtacttgaatcgatctgtga 28481410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 114; E-Value: 9e-58
Query Start/End: Original strand, 10 - 203
Target Start/End: Original strand, 29697449 - 29697642
Alignment:
Q  10 gatggacatcatggagtcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttg 109  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||||||| |  ||||||| |||||||| | |||| ||||||||||  |||||||||    
T  29697449 gatggccatcatggagtcttcaattgctttgagaagtgatggtgtgatttcttcgccttttttaagctccttggcatccatgaaagttcgaactcctttg 29697548  T
Q  110 tcatcaagagctatcttgagatagcttgtgaaaccatgacgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaattgatctgtga 203  Q
    |||||||||||| |||||||||| |  ||||||||||||||||||||||| |||| ||| |||||||||||||| ||||||||||||| |||||    
T  29697549 tcatcaagagctttcttgagataaccggtgaaaccatgacgagtatcctcgcctctaaaactgagaaaaacatcatacttgaattgatttgtga 29697642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 10 - 228
Target Start/End: Original strand, 29761191 - 29761409
Alignment:
Q  10 gatggacatcatggagtcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttg 109  Q
    ||||| ||||||||| | |||||| ||||| |||||||||||||||||||| |  |||||| | |||||||  ||||| ||||||||||  |||||||||    
T  29761191 gatggccatcatggactgttcaattgctttaagaagtgatggtgtgatttcttcaccttttcgtagctccttatcatccatgaaagttcgaactcctttg 29761290  T
Q  110 tcatcaagagctatcttgagatagcttgtgaaaccatgacgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaattgatctgtgagggaag 209  Q
    |||||||||||| ||||||||||||  ||||||||||| |||||||| || ||||  |||||||| ||||||||||||||||||||||||| |||||| |    
T  29761291 tcatcaagagctttcttgagatagccagtgaaaccatggcgagtatcttcgcctctgaagctgaggaaaacatcgtacttgaattgatctgcgagggatg 29761390  T
Q  210 ccatgatgagtgaatgaat 228  Q
    |||||||||||||| ||||    
T  29761391 ccatgatgagtgaacgaat 29761409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 192
Target Start/End: Original strand, 29679677 - 29679846
Alignment:
Q  23 gagtcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgtcatcaagagcta 122  Q
    ||||||||||| || || | |||||| ||||||||||||| |||||| ||||| | ||||||||| |||||||||||||||||||||||||||||||||     
T  29679677 gagtcttcaattgccttaataagtgacggtgtgatttcatcccctttctgaagattctcgtcatccatgaaagttctgactcctttgtcatcaagagctt 29679776  T
Q  123 tcttgagatagcttgtgaaaccatgacgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaa 192  Q
    ||  ||| | ||  |||||||| || || || || || |||| |||||||||||||||||||||||||||    
T  29679777 tccagaggttgccagtgaaaccgtggcgggtgtcttcgcctctaaagctgagaaaaacatcgtacttgaa 29679846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 28491660 - 28491803
Alignment:
Q  28 ttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgtcatcaagagctatcttg 127  Q
    |||||| |||||||  ||||||||||||||||| |  |||||||||||||||||||| || |||||||| | ||||||||||||||  |||||| ||       
T  28491660 ttcaatggctttgatgagtgatggtgtgatttcttcacctttttgaagctcctcgtcgtccatgaaagtacggactcctttgtcatggagagctttccat 28491759  T
Q  128 agatagcttgtgaaaccatgacgagtatcctcacctcgaaagct 171  Q
    ||||  |  |||||||| |  |||||||||||||||||||||||    
T  28491760 agatttccagtgaaaccgtagcgagtatcctcacctcgaaagct 28491803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 28 - 171
Target Start/End: Original strand, 29804070 - 29804213
Alignment:
Q  28 ttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgtcatcaagagctatcttg 127  Q
    |||||| |||||||  ||||||||||||||||| |  |||||||||||||||||||| || |||||||| | ||||||||||||||  |||||| ||       
T  29804070 ttcaatggctttgatgagtgatggtgtgatttcttcacctttttgaagctcctcgtcgtccatgaaagtacggactcctttgtcatggagagctttccat 29804169  T
Q  128 agatagcttgtgaaaccatgacgagtatcctcacctcgaaagct 171  Q
    ||||  |  |||||||| |  |||||||||||||||||||||||    
T  29804170 agatttccagtgaaaccgtagcgagtatcctcacctcgaaagct 29804213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 27593158 - 27593207
Alignment:
Q  26 tcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaag 75  Q
    |||||||| || |||||||||||||||||||||||||| ||| |||||||    
T  27593158 tcttcaatggccttgagaagtgatggtgtgatttcatttcctctttgaag 27593207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 27677752 - 27677801
Alignment:
Q  26 tcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaag 75  Q
    |||||||| || ||||||||||||||||||||||||| |||| |||||||    
T  27677752 tcttcaatggccttgagaagtgatggtgtgatttcatcccctctttgaag 27677801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 29467881 - 29467809
Alignment:
Q  21 tggagtcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaa 93  Q
    |||| ||||||||||||||||  ||||||||||||||||| |  ||||||||||| || || ||||| |||||    
T  29467881 tggaatcttcaatagctttgatgagtgatggtgtgatttcttcgcctttttgaagttcttcatcatccatgaa 29467809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 26617351 - 26617280
Alignment:
Q  50 ggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgtcatcaagagct 121  Q
    |||||||||||||  ||| | |||||||||| |||||| ||||| |||| |||||||||||||  |||||||    
T  26617351 ggtgtgatttcatcacctctctgaagctccttgtcatcaatgaaggttcggactcctttgtcacaaagagct 26617280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 26635715 - 26635644
Alignment:
Q  50 ggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgtcatcaagagct 121  Q
    ||||||||||||| |||||||| |||||||| |||||| ||||| ||  ||| ||||||||||  |||||||    
T  26635715 ggtgtgatttcatccccttttttaagctccttgtcatcaatgaaggtgttgattcctttgtcagaaagagct 26635644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 26723279 - 26723208
Alignment:
Q  50 ggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgtcatcaagagct 121  Q
    |||||||||||||  ||| | |||||||||| |||||| ||||| |||| |||||||||||||  |||||||    
T  26723279 ggtgtgatttcatcacctctctgaagctccttgtcatcaatgaaggttcggactcctttgtcacaaagagct 26723208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 50 - 121
Target Start/End: Complemental strand, 26741681 - 26741610
Alignment:
Q  50 ggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgtcatcaagagct 121  Q
    ||||||||||||| |||||||| |||||||| |||||| ||||| ||  ||| ||||||||||  |||||||    
T  26741681 ggtgtgatttcatccccttttttaagctccttgtcatcaatgaaggtgttgattcctttgtcagaaagagct 26741610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 26959204 - 26959147
Alignment:
Q  36 ctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaa 93  Q
    |||||||||| || ||||||||||||| |||||||| |||||| | |||||| |||||    
T  26959204 ctttgagaagcgaaggtgtgatttcatccccttttttaagctctttgtcatcaatgaa 26959147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Complemental strand, 27678995 - 27678946
Alignment:
Q  26 tcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaag 75  Q
    |||||||| || |||||||||||||||||||||||||  ||| |||||||    
T  27678995 tcttcaatggccttgagaagtgatggtgtgatttcatctcctctttgaag 27678946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 27706540 - 27706589
Alignment:
Q  26 tcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaag 75  Q
    |||||||| || ||||||||||||||||||||||||| || | |||||||    
T  27706540 tcttcaatggccttgagaagtgatggtgtgatttcatcccttctttgaag 27706589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 116; Significance: 5e-59; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 11 - 247
Target Start/End: Original strand, 241804 - 242046
Alignment:
Q  11 atggacatcatggagtcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgt 110  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||| |  ||||||  |||||||| |||||| ||||||||||  | ||||||||    
T  241804 atggccatcatggagtcttcaattgctttgagaagtgatggtgtgatttcttcaccttttctaagctccttgtcatccatgaaagttcgaattcctttgt 241903  T
Q  111 catcaagagctatcttgagatagcttgtgaaaccatgacgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaattgat------ctgtgag 204  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||| || ||||  ||| ||||||||||||| ||| ||||| |||      |||||||    
T  241904 catcaagagctttcttgagatagcttgtgaaaccatggcgagtatcttcgcctctgaagttgagaaaaacatcatacgtgaatcgatttgtaactgtgag 242003  T
Q  205 ggaagccatgatgagtgaatgaattagtttgatgattatgaat 247  Q
    ||||||||||||||||| |||| || ||||||||| |||||||    
T  242004 ggaagccatgatgagtggatgagttggtttgatgaatatgaat 242046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 29 - 194
Target Start/End: Original strand, 214475 - 214640
Alignment:
Q  29 tcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgtcatcaagagctatcttga 128  Q
    ||||| || |||| |||||||||||| |||||||  ||||| |||||||   ||||||| |||||||||| |||||||||||||||||||||| ||   |    
T  214475 tcaattgccttgaaaagtgatggtgtaatttcatctcctttctgaagcttgccgtcatccatgaaagttcggactcctttgtcatcaagagctttccaaa 214574  T
Q  129 gatagcttgtgaaaccatgacgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaatt 194  Q
    |||  |  |||||||||| |||||||||||| |||| ||| || || || || |||||||| ||||    
T  214575 gatgaccggtgaaaccataacgagtatcctcgcctctaaaactaaggaacacgtcgtacttaaatt 214640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 1e-47; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 11 - 215
Target Start/End: Complemental strand, 613245 - 613041
Alignment:
Q  11 atggacatcatggagtcttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgt 110  Q
    |||| |||||| ||||||||||| |||||||||||||||||||| ||||| |  |||||| ||||||| |||||||| |||||||| | |||||||||||    
T  613245 atggccatcatagagtcttcaattgctttgagaagtgatggtgtaatttcttcgccttttcgaagctcgtcgtcatccatgaaagtacggactcctttgt 613146  T
Q  111 catcaagagctatcttgagatagcttgtgaaaccatgacgagtatcctcacctcgaaagctgagaaaaacatcgtacttgaattgatctgtgagggaagc 210  Q
    ||||||||||| ||||||||||||  ||||||||||  |||||||| || ||||  || ||||  ||||| || ||||||||| ||||||||||||||||    
T  613145 catcaagagctttcttgagatagccggtgaaaccatagcgagtatcttcgcctctgaaactgatgaaaacgtcatacttgaatcgatctgtgagggaagc 613046  T
Q  211 catga 215  Q
    |||||    
T  613045 catga 613041  T

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Target: chr1 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 28 - 110
Target Start/End: Original strand, 5924497 - 5924579
Alignment:
Q  28 ttcaatagctttgagaagtgatggtgtgatttcattccctttttgaagctcctcgtcatcgatgaaagttctgactcctttgt 110  Q
    ||||||||||||||||||||| ||||||||||  |  ||||||||||| |  ||||| |||||||| ||  ||| ||||||||    
T  5924497 ttcaatagctttgagaagtgagggtgtgatttggtcacctttttgaagatgatcgtcgtcgatgaaggtcatgattcctttgt 5924579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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