View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6708_low_50 (Length: 206)
Name: NF6708_low_50
Description: NF6708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6708_low_50 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 173; Significance: 3e-93; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 14 - 206
Target Start/End: Original strand, 10416965 - 10417157
Alignment:
| Q |
14 |
catcacctcctacatccgatgcggccaccccatctccgcatttaacctcttcctctctctccgccgcatacgcatcgaccttgactcccacaccttcacc |
113 |
Q |
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| T |
10416965 |
catcacctcctacatccgacgcggccaccccatctccgcatttaacctcttcctctctctccgccgcatacgcatcgacctcgactcccacaccttcacc |
10417064 |
T |
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| Q |
114 |
ccgctcctccgtccgtcccctccttcactcggtaaacaactccactcgcaaatgatcagaactggttcagactccggaaccgttccaaaaacc |
206 |
Q |
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| T |
10417065 |
ccgctcctccgtccatcccctacttcactcggtaaacaactccactcgcaaatgatcaaaactggttcagactccggaaccgttccaaaaacc |
10417157 |
T |
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