View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6709_high_9 (Length: 255)
Name: NF6709_high_9
Description: NF6709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6709_high_9 |
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Alignment Details
Target: chr7 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 2 - 240
Target Start/End: Complemental strand, 25936127 - 25935889
Alignment:
| Q |
2 |
catcaaaaggtgtattgacatggattctatgaaaccatgtgagctcacaaaataaagaatataccttagcaaatacatcattgccccaatatgccttcat |
101 |
Q |
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| T |
25936127 |
catcaaaaggtgtattgacatggattctatgaaaccatgtgagctcacaaaataaagaatataccttagcaaatacatcattgccccaatatgccttcat |
25936028 |
T |
|
| Q |
102 |
gtctgcattaaaagctgataacatcagaccccatgaagttacctgaaatacaacaactcacatcattcaaacaactaatctaccatcaactcttcaaata |
201 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25936027 |
gtctgcattaaaagctgataacatcagaccccatgaagttacctgaaatacaacaactcacatcattcaaacaactaatctaccatcaactcttcaaata |
25935928 |
T |
|
| Q |
202 |
ttgttatgcttgcacaagcagctcaaaatcagaatatta |
240 |
Q |
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||||||||||||||||||||||||||||||||||||||| |
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| T |
25935927 |
ttgttatgcttgcacaagcagctcaaaatcagaatatta |
25935889 |
T |
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