View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6709_low_1 (Length: 287)
Name: NF6709_low_1
Description: NF6709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6709_low_1 |
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Alignment Details
Target: chr6 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 41 - 274
Target Start/End: Complemental strand, 7859226 - 7858993
Alignment:
| Q |
41 |
aggaaatagagttgcgcaaacctaacaagggatgaacaaattaacctgaaccgaaggagaagaaacactagatgaaaaaagcctctcttcttttgctgtg |
140 |
Q |
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| T |
7859226 |
aggaaatagagttgcgcaaacctaacaagggatgaacaaattaacctgaaccgaaggagaagaaacactagatgaaaaaagcctctcttcttttgctgtg |
7859127 |
T |
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| Q |
141 |
gatgcttctcgttcccttctccgtttcttcatagctgaacaaatgaatcaaggatggttggttggaaggtatttacattaaaagggccaacaagggtaag |
240 |
Q |
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| T |
7859126 |
gatgcttctcgttcccttctccgtttcttcatagctgaacaaatgaatcaaggatggttggttggaaggtatttacattaaaagggccaacaaggataag |
7859027 |
T |
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| Q |
241 |
agccagacttcaaacttttactttttcgattgat |
274 |
Q |
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| T |
7859026 |
agccagacttcaaacttttactttttcgattgat |
7858993 |
T |
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