View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6711_high_17 (Length: 223)

Name: NF6711_high_17
Description: NF6711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6711_high_17
NF6711_high_17
[»] chr5 (63 HSPs)
chr5 (1-173)||(7866523-7866696)
chr5 (1-171)||(19572668-19572839)
chr5 (1-173)||(9812814-9812987)
chr5 (1-172)||(5731912-5732084)
chr5 (1-173)||(12704956-12705129)
chr5 (1-173)||(12766073-12766246)
chr5 (3-171)||(42086271-42086440)
chr5 (1-171)||(1538375-1538546)
chr5 (18-172)||(20525781-20525936)
chr5 (1-171)||(8513463-8513634)
chr5 (58-172)||(28857071-28857186)
chr5 (1-173)||(20682609-20682783)
chr5 (43-160)||(25417217-25417335)
chr5 (1-172)||(38897711-38897882)
chr5 (61-171)||(18136332-18136443)
chr5 (36-171)||(37263185-37263320)
chr5 (62-173)||(30349521-30349633)
chr5 (1-172)||(41163452-41163623)
chr5 (1-173)||(42861210-42861383)
chr5 (1-171)||(4016247-4016418)
chr5 (19-171)||(23383592-23383754)
chr5 (26-171)||(9168270-9168414)
chr5 (54-171)||(35403557-35403675)
chr5 (36-172)||(14588644-14588780)
chr5 (36-174)||(3653941-3654078)
chr5 (1-117)||(9805003-9805119)
chr5 (41-171)||(30995065-30995196)
chr5 (67-160)||(1898956-1899050)
chr5 (36-173)||(5079273-5079411)
chr5 (36-168)||(7308391-7308524)
chr5 (36-168)||(23247378-23247511)
chr5 (55-171)||(26077085-26077202)
chr5 (95-171)||(28856921-28856998)
chr5 (100-171)||(6767142-6767214)
chr5 (59-172)||(39728330-39728444)
chr5 (36-131)||(12081892-12081988)
chr5 (9-156)||(28862784-28862932)
chr5 (10-151)||(11845802-11845944)
chr5 (82-171)||(17693406-17693496)
chr5 (36-137)||(42291532-42291634)
chr5 (58-150)||(13664225-13664318)
chr5 (36-171)||(14974351-14974485)
chr5 (68-171)||(16755005-16755109)
chr5 (57-172)||(38297012-38297128)
chr5 (36-119)||(18262645-18262728)
chr5 (17-171)||(18294492-18294646)
chr5 (55-117)||(35006781-35006843)
chr5 (10-171)||(35561819-35561981)
chr5 (60-172)||(2485140-2485252)
chr5 (58-142)||(15034048-15034133)
chr5 (40-93)||(25452948-25453001)
chr5 (36-168)||(35813025-35813158)
chr5 (42-174)||(41800918-41801051)
chr5 (62-157)||(14152008-14152104)
chr5 (1-98)||(39099771-39099868)
chr5 (54-172)||(1826800-1826920)
chr5 (36-171)||(20255313-20255449)
chr5 (36-92)||(24463913-24463969)
chr5 (55-119)||(38369697-38369760)
chr5 (40-91)||(6764488-6764539)
chr5 (75-168)||(20692880-20692974)
chr5 (49-99)||(40117432-40117482)
chr5 (37-98)||(43399146-43399207)
[»] chr6 (39 HSPs)
chr6 (1-171)||(21898595-21898766)
chr6 (1-173)||(6606089-6606262)
chr6 (1-173)||(8611966-8612139)
chr6 (1-173)||(14107350-14107523)
chr6 (1-171)||(13468880-13469051)
chr6 (1-171)||(5253215-5253386)
chr6 (1-171)||(19089445-19089616)
chr6 (44-174)||(24671901-24672032)
chr6 (36-172)||(2271330-2271465)
chr6 (1-168)||(13035996-13036164)
chr6 (36-172)||(9179763-9179900)
chr6 (1-173)||(12606375-12606548)
chr6 (42-171)||(19230592-19230720)
chr6 (1-171)||(29444757-29444928)
chr6 (55-172)||(10311515-10311633)
chr6 (1-140)||(12635792-12635932)
chr6 (1-167)||(30788845-30789010)
chr6 (1-171)||(8932608-8932779)
chr6 (1-171)||(8944074-8944245)
chr6 (58-171)||(29333188-29333301)
chr6 (1-168)||(3601034-3601202)
chr6 (42-172)||(3587978-3588109)
chr6 (62-171)||(21016804-21016914)
chr6 (95-172)||(15643915-15643992)
chr6 (36-171)||(8938658-8938794)
chr6 (87-173)||(5759573-5759660)
chr6 (1-92)||(9633617-9633708)
chr6 (42-171)||(33939958-33940088)
chr6 (87-171)||(3030696-3030781)
chr6 (36-171)||(17114924-17115060)
chr6 (40-164)||(9366454-9366579)
chr6 (79-174)||(26476433-26476529)
chr6 (58-168)||(9147251-9147362)
chr6 (38-93)||(13391312-13391367)
chr6 (1-83)||(14783412-14783494)
chr6 (36-160)||(34954646-34954770)
chr6 (35-85)||(7300211-7300261)
chr6 (38-79)||(424460-424501)
chr6 (1-53)||(4596187-4596239)
[»] chr2 (75 HSPs)
chr2 (1-171)||(7747217-7747388)
chr2 (1-171)||(41031898-41032068)
chr2 (1-171)||(331444-331615)
chr2 (1-171)||(44139427-44139598)
chr2 (37-171)||(8410074-8410209)
chr2 (37-171)||(2550811-2550946)
chr2 (1-144)||(10823030-10823174)
chr2 (36-171)||(38962706-38962842)
chr2 (36-171)||(42770678-42770814)
chr2 (18-171)||(18902539-18902693)
chr2 (1-154)||(41220595-41220749)
chr2 (36-171)||(38005345-38005481)
chr2 (1-171)||(10026608-10026779)
chr2 (18-168)||(21286390-21286541)
chr2 (38-167)||(7787003-7787133)
chr2 (10-167)||(27725887-27726045)
chr2 (4-171)||(44945537-44945704)
chr2 (36-173)||(3643914-3644052)
chr2 (36-171)||(22593078-22593213)
chr2 (49-168)||(45263707-45263827)
chr2 (43-173)||(13026445-13026576)
chr2 (1-155)||(25540396-25540551)
chr2 (19-173)||(35946680-35946834)
chr2 (1-171)||(20612526-20612699)
chr2 (58-173)||(33005693-33005808)
chr2 (42-173)||(39201541-39201673)
chr2 (1-171)||(10046469-10046639)
chr2 (41-171)||(21180346-21180477)
chr2 (10-171)||(6358152-6358314)
chr2 (35-168)||(16034883-16035017)
chr2 (36-173)||(29422156-29422294)
chr2 (55-171)||(15079426-15079543)
chr2 (61-172)||(2528393-2528505)
chr2 (1-171)||(34356149-34356320)
chr2 (1-119)||(12455306-12455424)
chr2 (18-171)||(12864167-12864321)
chr2 (82-171)||(23500755-23500844)
chr2 (18-171)||(11069821-11069975)
chr2 (18-171)||(18649035-18649189)
chr2 (55-160)||(39806931-39807037)
chr2 (36-168)||(37560119-37560252)
chr2 (49-172)||(5035230-5035354)
chr2 (53-168)||(29802757-29802872)
chr2 (55-171)||(2149240-2149358)
chr2 (18-171)||(9360757-9360911)
chr2 (18-171)||(14169618-14169772)
chr2 (41-170)||(41187793-41187923)
chr2 (58-174)||(37804940-37805057)
chr2 (1-108)||(16325602-16325709)
chr2 (58-171)||(19976856-19976970)
chr2 (18-171)||(34738342-34738487)
chr2 (55-171)||(10669535-10669652)
chr2 (63-171)||(14853421-14853530)
chr2 (42-167)||(24179518-24179641)
chr2 (40-176)||(29653566-29653702)
chr2 (36-171)||(3811718-3811854)
chr2 (42-168)||(3848947-3849074)
chr2 (117-178)||(20963218-20963279)
chr2 (1-168)||(28616371-28616540)
chr2 (57-144)||(15234109-15234197)
chr2 (1-84)||(28525447-28525530)
chr2 (74-168)||(31596497-31596592)
chr2 (26-171)||(44193422-44193571)
chr2 (15-168)||(4080323-4080477)
chr2 (58-171)||(40968964-40969078)
chr2 (117-171)||(44773208-44773262)
chr2 (36-160)||(34722635-34722759)
chr2 (1-144)||(34346279-34346423)
chr2 (58-173)||(41187650-41187766)
chr2 (55-144)||(10219441-10219531)
chr2 (58-175)||(44548781-44548899)
chr2 (58-142)||(2784905-2784989)
chr2 (42-173)||(16813198-16813329)
chr2 (42-173)||(16852477-16852608)
chr2 (1-97)||(20116604-20116700)
[»] chr7 (58 HSPs)
chr7 (1-173)||(22993359-22993532)
chr7 (1-171)||(48804629-48804800)
chr7 (1-182)||(13095793-13095975)
chr7 (42-168)||(1797409-1797536)
chr7 (1-171)||(10047868-10048039)
chr7 (18-171)||(4195211-4195365)
chr7 (1-168)||(5069807-5069975)
chr7 (1-171)||(18785615-18785786)
chr7 (36-173)||(22973911-22974049)
chr7 (58-171)||(43925458-43925572)
chr7 (55-171)||(47341822-47341939)
chr7 (36-171)||(17748409-17748545)
chr7 (35-169)||(34659174-34659309)
chr7 (26-171)||(16802069-16802215)
chr7 (1-171)||(14650263-14650434)
chr7 (14-171)||(43346784-43346942)
chr7 (1-173)||(36619246-36619419)
chr7 (1-171)||(42210254-42210425)
chr7 (36-173)||(19914730-19914867)
chr7 (42-167)||(23658130-23658255)
chr7 (43-172)||(43862006-43862136)
chr7 (1-173)||(21530692-21530865)
chr7 (1-172)||(1605886-1606058)
chr7 (35-172)||(4228780-4228915)
chr7 (1-171)||(8734678-8734849)
chr7 (18-132)||(38578876-38578991)
chr7 (35-160)||(14535248-14535374)
chr7 (1-142)||(21190772-21190914)
chr7 (42-171)||(26423320-26423450)
chr7 (42-171)||(39420784-39420913)
chr7 (87-173)||(34127698-34127785)
chr7 (1-172)||(39474884-39475057)
chr7 (36-172)||(5039445-5039582)
chr7 (68-172)||(22268088-22268193)
chr7 (55-167)||(46414625-46414738)
chr7 (36-171)||(45960030-45960165)
chr7 (58-171)||(365086-365200)
chr7 (58-171)||(27875137-27875250)
chr7 (18-171)||(45447916-45448070)
chr7 (18-174)||(27028222-27028379)
chr7 (49-168)||(29151889-29152009)
chr7 (87-165)||(9685691-9685770)
chr7 (36-119)||(49142696-49142779)
chr7 (60-168)||(24969377-24969484)
chr7 (36-171)||(3353371-3353506)
chr7 (10-172)||(37514866-37515029)
chr7 (74-167)||(42032046-42032140)
chr7 (117-173)||(11607075-11607131)
chr7 (41-108)||(32823253-32823320)
chr7 (42-171)||(4973143-4973273)
chr7 (42-134)||(28396193-28396286)
chr7 (36-85)||(41945506-41945555)
chr7 (36-135)||(48244383-48244483)
chr7 (58-172)||(29805489-29805603)
chr7 (55-172)||(44961684-44961802)
chr7 (1-102)||(28744178-28744279)
chr7 (42-119)||(30827291-30827368)
chr7 (118-170)||(13845326-13845378)
[»] chr4 (77 HSPs)
chr4 (1-171)||(47078406-47078577)
chr4 (1-171)||(29895735-29895906)
chr4 (34-171)||(1446774-1446912)
chr4 (18-174)||(38165972-38166129)
chr4 (1-171)||(53599008-53599179)
chr4 (36-173)||(5472875-5473013)
chr4 (36-172)||(3574473-3574610)
chr4 (36-171)||(27248376-27248510)
chr4 (35-171)||(41339421-41339558)
chr4 (1-155)||(42722569-42722724)
chr4 (36-173)||(1940804-1940939)
chr4 (1-172)||(55920981-55921153)
chr4 (42-171)||(33647669-33647799)
chr4 (18-173)||(2559253-2559409)
chr4 (36-171)||(24166398-24166534)
chr4 (36-171)||(43458561-43458697)
chr4 (1-171)||(8888970-8889141)
chr4 (14-172)||(48317280-48317439)
chr4 (1-161)||(36262759-36262918)
chr4 (18-171)||(52950030-52950184)
chr4 (36-171)||(6779159-6779295)
chr4 (36-171)||(41162909-41163045)
chr4 (18-172)||(14123963-14124118)
chr4 (1-155)||(20128273-20128428)
chr4 (68-174)||(27531717-27531823)
chr4 (58-171)||(38075381-38075495)
chr4 (19-171)||(4736545-4736698)
chr4 (44-168)||(29588687-29588812)
chr4 (1-149)||(38168227-38168375)
chr4 (18-173)||(295542-295697)
chr4 (42-173)||(7741871-7742003)
chr4 (36-171)||(20532436-20532572)
chr4 (36-171)||(49260692-49260828)
chr4 (18-132)||(3159478-3159593)
chr4 (42-172)||(13073485-13073616)
chr4 (42-168)||(6032676-6032800)
chr4 (18-168)||(40780870-40781021)
chr4 (41-171)||(7000472-7000599)
chr4 (1-166)||(20421727-20421892)
chr4 (18-138)||(7246655-7246776)
chr4 (33-173)||(33109268-33109411)
chr4 (39-157)||(15839965-15840083)
chr4 (38-171)||(12703574-12703708)
chr4 (26-167)||(42722396-42722537)
chr4 (56-172)||(15732495-15732612)
chr4 (26-119)||(43468348-43468441)
chr4 (38-138)||(48015102-48015203)
chr4 (36-155)||(36145242-36145362)
chr4 (87-165)||(13552068-13552147)
chr4 (18-152)||(30317200-30317335)
chr4 (1-119)||(16645119-16645237)
chr4 (74-171)||(13436762-13436858)
chr4 (41-172)||(14567198-14567318)
chr4 (58-166)||(40272380-40272489)
chr4 (36-167)||(3507223-3507354)
chr4 (55-118)||(10541018-10541081)
chr4 (105-171)||(34667698-34667765)
chr4 (18-72)||(50485991-50486045)
chr4 (118-171)||(15829647-15829700)
chr4 (43-167)||(37382497-37382622)
chr4 (63-174)||(48656163-48656276)
chr4 (119-171)||(19651556-19651608)
chr4 (18-141)||(21429279-21429403)
chr4 (58-152)||(24850676-24850770)
chr4 (36-110)||(16450310-16450384)
chr4 (36-102)||(17080061-17080127)
chr4 (35-168)||(8064824-8064957)
chr4 (87-171)||(11308156-11308241)
chr4 (1-109)||(4738629-4738737)
chr4 (36-83)||(14597927-14597974)
chr4 (121-176)||(45789632-45789687)
chr4 (38-160)||(55005335-55005458)
chr4 (58-135)||(6862209-6862286)
chr4 (58-171)||(26479998-26480112)
chr4 (41-171)||(31588632-31588765)
chr4 (1-119)||(45721087-45721205)
chr4 (37-93)||(37369070-37369126)
[»] chr1 (74 HSPs)
chr1 (1-171)||(18915811-18915982)
chr1 (18-173)||(50503371-50503527)
chr1 (1-171)||(33004008-33004179)
chr1 (2-172)||(43959815-43959986)
chr1 (18-171)||(5855466-5855620)
chr1 (1-173)||(26325754-26325927)
chr1 (1-172)||(8763934-8764106)
chr1 (1-172)||(49078057-49078229)
chr1 (1-170)||(41663849-41664019)
chr1 (42-171)||(2980965-2981095)
chr1 (1-174)||(17641997-17642171)
chr1 (14-171)||(40288483-40288641)
chr1 (18-172)||(15238116-15238271)
chr1 (36-172)||(33418143-33418280)
chr1 (1-168)||(10172964-10173132)
chr1 (36-171)||(10422732-10422868)
chr1 (1-160)||(45361875-45362035)
chr1 (36-171)||(11397917-11398052)
chr1 (34-171)||(48798096-48798234)
chr1 (36-163)||(33498867-33498995)
chr1 (55-174)||(34877931-34878051)
chr1 (1-139)||(37339795-37339935)
chr1 (1-167)||(9659172-9659338)
chr1 (55-172)||(12036791-12036909)
chr1 (96-172)||(41743216-41743293)
chr1 (37-160)||(30927756-30927880)
chr1 (58-167)||(32819-32929)
chr1 (66-167)||(892355-892457)
chr1 (36-173)||(17092505-17092643)
chr1 (18-171)||(18649362-18649516)
chr1 (57-173)||(45536651-45536767)
chr1 (68-176)||(51437408-51437517)
chr1 (36-159)||(10336472-10336596)
chr1 (37-136)||(16263524-16263624)
chr1 (37-172)||(34697278-34697414)
chr1 (55-170)||(42744732-42744839)
chr1 (55-173)||(15465907-15466026)
chr1 (66-151)||(34334353-34334439)
chr1 (55-163)||(6563393-6563502)
chr1 (52-172)||(9853321-9853441)
chr1 (36-172)||(14254296-14254433)
chr1 (1-149)||(16956432-16956581)
chr1 (55-173)||(2567218-2567337)
chr1 (17-100)||(10507714-10507797)
chr1 (36-167)||(32142874-32143005)
chr1 (1-116)||(44969665-44969779)
chr1 (58-168)||(47312949-47313059)
chr1 (55-172)||(31152659-31152777)
chr1 (58-171)||(31576597-31576711)
chr1 (42-170)||(45726467-45726596)
chr1 (36-167)||(32150950-32151082)
chr1 (36-171)||(41696626-41696761)
chr1 (1-171)||(34719720-34719891)
chr1 (58-171)||(17389716-17389829)
chr1 (42-171)||(17988694-17988823)
chr1 (41-111)||(21849238-21849307)
chr1 (65-173)||(18808207-18808316)
chr1 (81-172)||(937559-937650)
chr1 (68-171)||(8905211-8905314)
chr1 (40-171)||(26660082-26660214)
chr1 (37-172)||(46929767-46929902)
chr1 (38-173)||(50371864-50372000)
chr1 (1-84)||(4581675-4581758)
chr1 (43-173)||(25165344-25165473)
chr1 (58-151)||(17358521-17358615)
chr1 (1-111)||(35211165-35211275)
chr1 (36-171)||(5503975-5504111)
chr1 (122-174)||(40226357-40226409)
chr1 (97-167)||(1764278-1764349)
chr1 (19-144)||(26258667-26258792)
chr1 (55-167)||(31734237-31734349)
chr1 (35-116)||(42710165-42710246)
chr1 (43-119)||(28324615-28324691)
chr1 (55-83)||(50952266-50952294)
[»] chr3 (75 HSPs)
chr3 (14-171)||(51682960-51683118)
chr3 (1-173)||(15320127-15320300)
chr3 (1-174)||(54261166-54261340)
chr3 (1-172)||(29135855-29136027)
chr3 (1-171)||(25294903-25295074)
chr3 (1-167)||(28572204-28572371)
chr3 (18-171)||(26207811-26207965)
chr3 (1-168)||(6462358-6462526)
chr3 (37-172)||(39849014-39849149)
chr3 (35-173)||(42412801-42412940)
chr3 (18-171)||(10040500-10040653)
chr3 (14-167)||(30767253-30767407)
chr3 (36-171)||(13893869-13894005)
chr3 (19-174)||(49543459-49543615)
chr3 (37-171)||(35315899-35316034)
chr3 (1-171)||(41630505-41630676)
chr3 (42-171)||(48341963-48342093)
chr3 (36-172)||(7328786-7328922)
chr3 (35-173)||(3762992-3763130)
chr3 (1-171)||(7650170-7650341)
chr3 (1-171)||(29127862-29128033)
chr3 (18-172)||(47471774-47471928)
chr3 (42-171)||(3755513-3755643)
chr3 (42-171)||(45877397-45877527)
chr3 (62-171)||(46529924-46530034)
chr3 (36-173)||(32873577-32873714)
chr3 (35-171)||(49198294-49198431)
chr3 (40-171)||(10855327-10855459)
chr3 (60-171)||(11687161-11687273)
chr3 (1-168)||(31072824-31072992)
chr3 (37-172)||(33251604-33251740)
chr3 (36-171)||(47749133-47749268)
chr3 (18-172)||(29762165-29762320)
chr3 (1-171)||(51060274-51060445)
chr3 (26-149)||(15795512-15795635)
chr3 (41-171)||(7310736-7310867)
chr3 (55-176)||(30045759-30045881)
chr3 (58-171)||(40944826-40944940)
chr3 (41-173)||(28242219-28242352)
chr3 (55-170)||(41219537-41219652)
chr3 (36-166)||(49082772-49082903)
chr3 (18-171)||(4638097-4638251)
chr3 (55-144)||(52364847-52364937)
chr3 (1-173)||(3136687-3136859)
chr3 (18-167)||(3507543-3507694)
chr3 (1-160)||(26361960-26362118)
chr3 (18-171)||(55069689-55069843)
chr3 (77-160)||(10043104-10043187)
chr3 (3-142)||(47219116-47219256)
chr3 (69-171)||(7612987-7613090)
chr3 (36-119)||(8164549-8164632)
chr3 (58-172)||(45450497-45450609)
chr3 (1-172)||(8362524-8362691)
chr3 (61-172)||(19873315-19873420)
chr3 (68-173)||(37092565-37092671)
chr3 (42-167)||(47303523-47303649)
chr3 (1-141)||(54237421-54237562)
chr3 (55-170)||(35923670-35923786)
chr3 (18-110)||(50405613-50405705)
chr3 (49-167)||(22405584-22405703)
chr3 (36-115)||(26043812-26043891)
chr3 (42-144)||(53649697-53649800)
chr3 (34-174)||(7139692-7139833)
chr3 (1-84)||(2668092-2668175)
chr3 (74-172)||(11025439-11025536)
chr3 (18-132)||(33688933-33689048)
chr3 (55-136)||(26590313-26590395)
chr3 (1-79)||(49021196-49021274)
chr3 (18-98)||(19146978-19147058)
chr3 (49-124)||(40660368-40660444)
chr3 (36-84)||(43330760-43330808)
chr3 (36-98)||(7648757-7648819)
chr3 (62-164)||(13167497-13167604)
chr3 (87-166)||(33560808-33560888)
chr3 (19-119)||(45402362-45402462)
[»] chr8 (53 HSPs)
chr8 (36-171)||(44893305-44893441)
chr8 (1-171)||(6100419-6100590)
chr8 (1-171)||(10927553-10927724)
chr8 (1-174)||(2467110-2467284)
chr8 (1-173)||(2964021-2964194)
chr8 (37-171)||(14666099-14666234)
chr8 (1-173)||(15884548-15884720)
chr8 (55-171)||(38922460-38922577)
chr8 (55-173)||(17981386-17981505)
chr8 (36-174)||(24837186-24837325)
chr8 (18-171)||(13085471-13085624)
chr8 (57-171)||(34846761-34846875)
chr8 (58-177)||(1013026-1013146)
chr8 (18-171)||(9860004-9860159)
chr8 (36-167)||(33401826-33401958)
chr8 (58-171)||(8141049-8141163)
chr8 (36-172)||(26570870-26571007)
chr8 (36-171)||(45521116-45521251)
chr8 (36-166)||(43032853-43032984)
chr8 (42-171)||(43027252-43027382)
chr8 (1-174)||(3418505-3418679)
chr8 (55-172)||(13358968-13359086)
chr8 (58-171)||(14846523-14846636)
chr8 (36-171)||(583761-583895)
chr8 (18-168)||(4479305-4479455)
chr8 (36-167)||(35496282-35496413)
chr8 (49-174)||(68138-68264)
chr8 (36-173)||(16893882-16894019)
chr8 (26-119)||(6042821-6042914)
chr8 (49-171)||(7673697-7673816)
chr8 (42-174)||(18373954-18374087)
chr8 (68-171)||(22810027-22810130)
chr8 (36-171)||(33935762-33935898)
chr8 (58-172)||(8997593-8997708)
chr8 (41-171)||(29933720-29933850)
chr8 (18-168)||(38235855-38236006)
chr8 (38-167)||(44031464-44031599)
chr8 (58-171)||(10535453-10535566)
chr8 (58-171)||(11785864-11785976)
chr8 (62-171)||(34613831-34613941)
chr8 (69-173)||(6940503-6940608)
chr8 (43-171)||(24938596-24938725)
chr8 (37-173)||(36662349-36662486)
chr8 (18-98)||(13357965-13358045)
chr8 (26-110)||(27975900-27975984)
chr8 (26-110)||(28033169-28033253)
chr8 (121-172)||(9395931-9395982)
chr8 (57-171)||(17845680-17845793)
chr8 (49-103)||(8586979-8587033)
chr8 (1-67)||(8803106-8803172)
chr8 (15-168)||(34710573-34710727)
chr8 (36-93)||(22958796-22958853)
chr8 (61-173)||(30903281-30903393)
[»] scaffold0376 (1 HSPs)
scaffold0376 (36-173)||(12614-12752)
[»] scaffold0006 (1 HSPs)
scaffold0006 (36-173)||(68461-68596)
[»] scaffold0029 (1 HSPs)
scaffold0029 (38-171)||(40990-41124)
[»] scaffold0005 (3 HSPs)
scaffold0005 (38-171)||(271103-271237)
scaffold0005 (41-172)||(250057-250177)
scaffold0005 (36-83)||(219404-219451)
[»] scaffold0170 (1 HSPs)
scaffold0170 (14-173)||(9789-9949)
[»] scaffold0002 (4 HSPs)
scaffold0002 (1-171)||(516-687)
scaffold0002 (1-173)||(319367-319539)
scaffold0002 (74-171)||(412091-412189)
scaffold0002 (62-164)||(139384-139491)
[»] scaffold0086 (1 HSPs)
scaffold0086 (37-171)||(26129-26264)
[»] scaffold0016 (1 HSPs)
scaffold0016 (19-171)||(8711-8873)
[»] scaffold0384 (1 HSPs)
scaffold0384 (18-171)||(5919-6072)
[»] scaffold0009 (2 HSPs)
scaffold0009 (75-171)||(9382-9479)
scaffold0009 (18-166)||(42841-42990)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-119)||(6854-6972)
[»] scaffold0209 (1 HSPs)
scaffold0209 (36-171)||(12521-12655)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-103)||(155703-155805)
scaffold0010 (36-171)||(25811-25947)
[»] scaffold0341 (1 HSPs)
scaffold0341 (55-163)||(18586-18695)
[»] scaffold0050 (1 HSPs)
scaffold0050 (64-144)||(72606-72686)
[»] scaffold0004 (2 HSPs)
scaffold0004 (35-165)||(95007-95136)
scaffold0004 (36-132)||(7862-7959)
[»] scaffold0316 (1 HSPs)
scaffold0316 (36-170)||(1641-1776)
[»] scaffold0079 (1 HSPs)
scaffold0079 (61-141)||(8151-8231)
[»] scaffold0223 (1 HSPs)
scaffold0223 (18-144)||(16852-16979)
[»] scaffold0332 (1 HSPs)
scaffold0332 (95-168)||(15280-15354)
[»] scaffold0548 (1 HSPs)
scaffold0548 (87-171)||(4646-4731)
[»] scaffold0024 (1 HSPs)
scaffold0024 (26-103)||(149400-149477)
[»] scaffold0116 (1 HSPs)
scaffold0116 (18-144)||(17363-17490)
[»] scaffold0011 (1 HSPs)
scaffold0011 (10-173)||(186462-186625)


Alignment Details
Target: chr5 (Bit Score: 106; Significance: 3e-53; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 106; E-Value: 3e-53
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 7866696 - 7866523
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| |||||||||| ||||||| |  |||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  7866696 ttttttgctttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcgg 7866597  T
Q  101 aattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||||||||| ||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  7866596 aatcgaacccggtattcctcgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggttta 7866523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19572839 - 19572668
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| |||||||||||||||||| | |||||  |||||| ||||| || ||||||||||||||| |||||||||||  ||||||| ||||||    
T  19572839 tttttggctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggg 19572740  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||  ||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  19572739 aatctaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 19572668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 9812987 - 9812814
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||  |||||| |  |||||||||||| |||||||| |||||||| ||||||||||||||||||| ||||||||||| ||    
T  9812987 tttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcgg 9812888  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| |||||||||| |||| ||||||||||||    
T  9812887 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttta 9812814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 5731912 - 5732084
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| ||||||||  ||||  |||||| || || || | ||||||||||||| |||||||||||| ||||||||||||||    
T  5731912 tttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctggg 5732011  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||    
T  5732012 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggttt 5732084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 12705129 - 12704956
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||  |||||| |  |||||||||||| |||||||| |||||||| ||||||||||||| ||||| ||||||||||| ||    
T  12705129 tttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcgg 12705030  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| |||||||||| |||| ||||||||||||    
T  12705029 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttta 12704956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 12766246 - 12766073
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||  |||||| |  |||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||  |    
T  12766246 tttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcag 12766147  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| |||||| ||| |||| ||||||||||||    
T  12766146 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactcgagtccaaacaacttggttta 12766073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 3 - 171
Target Start/End: Complemental strand, 42086440 - 42086271
Alignment:
Q  3 tttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaa 102  Q
    |||||| ||| ||| ||||||| |||||| |  ||||| |||||| ||||| || ||||||||||||||| |||||| ||||| ||||||| ||||||||    
T  42086440 tttggctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaa 42086341  T
Q  103 ttgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | |||||||||||||| ||| |||||||||| ||||||||||| ||||| ||||||||||||||||||||    
T  42086340 tcgaacccggtattcctcgggtacgtccttggaaggagctccttgccaccggagcccaagcaacttggtt 42086271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 1538546 - 1538375
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| | |||||| ||| || ||||| || ||||||||||||||| |||||||||||  ||||||| ||||||    
T  1538546 tttttggctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggg 1538447  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| |||| ||||||||| | ||||||||||| ||||||||||||||| ||||||||||    
T  1538446 aatcgaacccggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaacttggtt 1538375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 20525936 - 20525781
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| | |||| | |||||| |||||| ||||| || ||||||||||||||| ||||||| |||  ||||||| ||||||||| ||||||| |||||    
T  20525936 ggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccgatattc 20525837  T
Q  118 cc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    || |||||| |||||||||||||||||| |||||||||||||||||||||||||||    
T  20525836 cccggatacatccttgaaaggagctccttgccactggagcccaagcaacttggttt 20525781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 8513634 - 8513463
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| |  ||||| |||||| || || |||||||||||||||||  |||||||||||||||||| | ||| ||    
T  8513634 ttttttgctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctagg 8513535  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| |||||| ||| |||||||||||||||    
T  8513534 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaacttggtt 8513463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 58 - 172
Target Start/End: Complemental strand, 28857186 - 28857071
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||| |||||||||||  ||||||| ||||||||| |||||||||||| ||||| | |||||||| ||||||||||| |||||||||||    
T  28857186 tgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagc 28857087  T
Q  157 ccaagcaacttggttt 172  Q
    ||||||||||||||||    
T  28857086 ccaagcaacttggttt 28857071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 20682609 - 20682783
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||||||||||||  ||||| ||| || ||||| |||||||||||||||||| |||||||||||| ||||||| |||||     
T  20682609 ttttttgctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgga 20682708  T
Q  101 aattgaacccggtatt-cccggatacgtcctt-gaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||  |||||  |||| ||||| ||||||||| ||| ||||||||| | ||||||||||||||||||||||||||    
T  20682709 aatctaacccaatattccccgggtacgtccttagaatggagctccttgtcactggagcccaagcaacttggttta 20682783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 43 - 160
Target Start/End: Original strand, 25417217 - 25417335
Alignment:
Q  43 gactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagct 141  Q
    ||||| ||||| |||| ||||||||||||| |||||||||||| ||||||| ||||||||| ||||||||||||||| || |||||||||| ||||||||    
T  25417217 gactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgagtacgtccttggaaggagct 25417316  T
Q  142 cctcgccactggagcccaa 160  Q
    ||| |||||||||||||||    
T  25417317 ccttgccactggagcccaa 25417335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 38897711 - 38897882
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||||||||||| | |||| |  ||||||| |||| ||||| |||||||||||||||||| |||||||||||| ||||||| |||||     
T  38897711 tttttggctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcc-cctgga 38897809  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||| |||||||||||| |||  ||||||||||| || |||||||| |||||| |||  |||||||||||||||    
T  38897810 aatcgaacccggtattccccatatacgtccttgtaaagagctccttgccacttgagttcaagcaacttggttt 38897882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 61 - 171
Target Start/End: Original strand, 18136332 - 18136443
Alignment:
Q  61 gtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagccca 159  Q
    |||||||||||||||||| |||||  ||||||| ||||||||| ||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||    
T  18136332 gtagaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagctccttgccactggagccca 18136431  T
Q  160 agcaacttggtt 171  Q
    | ||||||||||    
T  18136432 aacaacttggtt 18136443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 37263320 - 37263185
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    ||||| |||||| ||||| |||||||||||||||||| || ||||||||| ||||||| |||| |||| ||||||| ||||||| || |||||||||  |    
T  37263320 ggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcc-cctgagaatcgaacccgatattccccgggtacgtccttaga 37263222  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||| ||||| ||||||||||||||||||||||||||    
T  37263221 aggaactccttgccactggagcccaagcaacttggtt 37263185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 62 - 173
Target Start/End: Complemental strand, 30349633 - 30349521
Alignment:
Q  62 tagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaa 160  Q
    ||||||||||| |||||||||| ||||||||| ||| | |||  |||||||||||||| ||||||||||||| ||||| ||||| |||||||||||||||    
T  30349633 tagaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggaactccttgccactggagcccaa 30349534  T
Q  161 gcaacttggttta 173  Q
     ||||||||||||    
T  30349533 acaacttggttta 30349521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 41163452 - 41163623
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| |||  |||||| |||||| |  ||||| |||||| ||| | || ||||||||| ||||  |||||||||| | ||||||| ||||||    
T  41163452 tttttggctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttcc-cctggg 41163550  T
Q  101 aattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||| ||||||||||||||| || ||||| |||| ||||||||||| ||||||||||||||| |||||||||||    
T  41163551 aatcgaacccggtattccccgggtacgttcttggaaggagctccttgccactggagcccaaacaacttggttt 41163623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 42861210 - 42861383
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||| ||| |||||| | |||||| ||| || ||||| || ||||||||||||||| |||||||||||  ||||| | ||||||    
T  42861210 tttttggctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttc-cctggg 42861308  T
Q  101 aa-ttgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    || ||||||||| ||||||| ||||| ||||||| || |||||||| ||||||||||||||| ||| ||||||||    
T  42861309 aaattgaacccgatattccccggatatgtccttggaatgagctccttgccactggagcccaaacaatttggttta 42861383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 4016247 - 4016418
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||||||||||| |||||| | ||||| || |||| ||||| ||||| |||||||||||| |||||||||||  ||||||| ||||      
T  4016247 tttttggctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgat 4016346  T
Q  101 aattgaacccggta-ttcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||| || ||| | | |||||||||| || ||||| || ||||||||||||||  ||||||||||    
T  4016347 aatcgaacccgatatttctcaggtacgtccttggaatgagcttcttgccactggagcccatacaacttggtt 4016418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 23383754 - 23383592
Alignment:
Q  19 gtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc 118  Q
    |||||| |||||| |  ||||| |||||| ||| | || |||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  23383754 gtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 23383655  T
Q  119 ----------cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
              | |||||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  23383654 tctgatacgtctgatacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 23383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 26 - 171
Target Start/End: Original strand, 9168270 - 9168414
Alignment:
Q  26 acccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggata 124  Q
    ||||||||  ||||| |||||| ||||| || |||||||||| |||| |||||||||||| |||||||| |||||||| |  | ||||||| ||||||||    
T  9168270 acccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttcct-ctgggaatcgttctcggtattccccggata 9168368  T
Q  125 cgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||| ||| |||||| |||| ||||||||||| ||||||||||||||    
T  9168369 cgtctttggaaggag-tccttgccactggagctcaagcaacttggtt 9168414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 35403557 - 35403675
Alignment:
Q  54 ttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactg 152  Q
    ||||||||||||| ||||| || ||||||||| ||||||| |||  |||| |||||||||||| || || |||||||||| ||||||||||| |||||||    
T  35403557 ttcgtgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactg 35403656  T
Q  153 gagcccaagcaacttggtt 171  Q
    |||||||| ||| ||||||    
T  35403657 gagcccaaacaagttggtt 35403675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 14588644 - 14588780
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| || ||||||||||||||| |||||| ||||| || |||||||||  ||| ||||||| |||| ||| ||||||||||||||    
T  14588644 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcgaacccgatattccccagatacgtccttgaa 14588743  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttt 172  Q
    || ||||||| |||||| ||||||| |||||| |||||    
T  14588744 agaagctccttgccact-gagcccatgcaactaggttt 14588780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 36 - 174
Target Start/End: Original strand, 3653941 - 3654078
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    ||||| |||||| ||||  |||||||||||||||||| |||||| ||||| ||||||   || ||||| ||||||||||||| |||| |||||||||| |    
T  3653941 ggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgttc--tctaggaatcgaacccggtattctccgggtacgtccttgga 3654038  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    | |||||| | | ||||||||||||| |||||||||||||    
T  3654039 aagagctcattgtcactggagcccaaacaacttggtttat 3654078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 9805119 - 9805003
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| |||  |||||| |||||| |  ||||| |||||| ||||| || ||||||||||||||| |||||||||||| ||||||| ||||||    
T  9805119 tttttggctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggg 9805020  T
Q  101 aattgaacccggtattc 117  Q
    ||| |||||||||||||    
T  9805019 aatcgaacccggtattc 9805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 30995196 - 30995065
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggag 139  Q
    ||||||| ||||| |||||||||||||||||| | |||||||||  ||||||| ||||||||| ||||| |||||||||    |||||||||| ||||||    
T  30995196 gcgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattccccatgtacgtccttggaaggag 30995097  T
Q  140 ctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| ||||||  | |||| |||||||||||    
T  30995096 ctccttgccactaaaacccaggcaacttggtt 30995065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 67 - 160
Target Start/End: Complemental strand, 1899050 - 1898956
Alignment:
Q  67 gcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaa 160  Q
    |||||| |||||||||||| ||||||| ||||||||| |||||||||||| ||||| ||| |||||| ||||||||||| ||||||| |||||||    
T  1899050 gcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgggtacatccttggaaggagctccttgccactgtagcccaa 1898956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 5079411 - 5079273
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaa 134  Q
    |||||||||||| ||||| ||||||||||| |||||| || || ||||||  |||||| ||||| |||  | ||||||||||| ||||||||| |||| |    
T  5079411 ggtgggcgactaatccggctcgtgcgtagaagcatgcgcattgaccaagcgctgttccccctggaaatcaaccccggtattccacggatacgtgcttgga 5079312  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||||||| | ||||| ||| ||||| ||||||||||||    
T  5079311 aggagctctttgccaccggaacccaaacaacttggttta 5079273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 168
Target Start/End: Original strand, 7308391 - 7308524
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaa 134  Q
    |||| ||||||| ||||| || ||||||||||||||  ||||| |||||| ||||||| ||||||||| ||||||| |||||| |  ||||||||||| |    
T  7308391 ggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcctcaaatacgtccttgga 7308490  T
Q  135 aggagctcctcgccactggagcccaagcaacttg 168  Q
    | |||||||| |||||| || ||||| |||||||    
T  7308491 atgagctccttgccactagaacccaaacaacttg 7308524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 168
Target Start/End: Original strand, 23247378 - 23247511
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    ||||| |||||| || || ||||||||||||||||||| ||||  ||||| ||||||||||||||||| ||||||| |||| ||| | |||||||||| |    
T  23247378 ggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaacccgatattccccaggtacgtccttgga 23247477  T
Q  135 aggagctcctcgccactggagcccaagcaacttg 168  Q
    | |||||||| || |||| || |||| |||||||    
T  23247478 atgagctccttgctactgaagtccaaacaacttg 23247511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 26077202 - 26077085
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||||||||  |||||||||||| |||||||  |||||||| |||||  ||||| |||  ||||||||||| || ||||||||  |||||||    
T  26077202 tcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtccttggaatgagctccttaccactgg 26077103  T
Q  154 agcccaagcaacttggtt 171  Q
    ||||||| ||||||||||    
T  26077102 agcccaaacaacttggtt 26077085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 171
Target Start/End: Complemental strand, 28856998 - 28856921
Alignment:
Q  95 cctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||||| ||||||||||||||| || | |||||||| ||||||||||| ||||||||||||||||||||||||||    
T  28856998 cctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggtt 28856921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 100 - 171
Target Start/End: Original strand, 6767142 - 6767214
Alignment:
Q  100 gaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||| ||||||||||||||| || |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  6767142 gaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 6767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 172
Target Start/End: Complemental strand, 39728444 - 39728330
Alignment:
Q  59 gcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcc 157  Q
    ||||||||||||||||||||||||||  ||||| |  |||  ||| ||||| ||||||||| || ||||| |||| || |||||||| ||||||||||||    
T  39728444 gcgtagaggcatgcacactggccaagtgttgtttcctctgataatcgaacctggtattccccgggtacgttcttggaaagagctccttgccactggagcc 39728345  T
Q  158 caagcaacttggttt 172  Q
    ||| |||||||||||    
T  39728344 caaacaacttggttt 39728330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 12081988 - 12081892
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtcctt 131  Q
    ||||| |||||| | ||| ||||||||||| |||||| |||||||||||| ||||||| |||| |||| |||||| ||||| |||||||||||||||    
T  12081988 ggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaacccagtattccccggatacgtcctt 12081892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 156
Target Start/End: Complemental strand, 28862932 - 28862784
Alignment:
Q  9 gttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaac 108  Q
    |||| ||| ||||||| ||| |||| ||||| || |||| | | | |||||||||||||||||  || ||||||||| ||||||| |||| |||| ||||    
T  28862932 gttcgcaccggtttccgacctactaatggtgagcaactaattcaggtcgtgcgtagaggcatgtgcattggccaagcgttgttccgcctgagaatcgaac 28862833  T
Q  109 ccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    | | |||| |||| ||||||| ||| ||||||||||| |||||||||||    
T  28862832 ctgatattccccgaatacgtctttggaaggagctccttgccactggagc 28862784  T

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Target: chr5; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 10 - 151
Target Start/End: Original strand, 11845802 - 11845944
Alignment:
Q  10 ttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacc 109  Q
    ||||||| |||||||||||||  |  ||||||||| || | ||| || | ||||||||||||| |||||||||| | ||||||| ||| | ||| |||||    
T  11845802 ttcacaccggtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcgaacc 11845901  T
Q  110 cggta-ttcccggatacgtccttgaaaggagctcctcgccact 151  Q
    || || ||| ||| |||||||||| ||||||||||| ||||||    
T  11845902 cgatatttctcgggtacgtccttggaaggagctccttgccact 11845944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 17693406 - 17693496
Alignment:
Q  82 aagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||| |||||||||||||||||||||||||||| |||| || |||||||||| |||| |||||| |||||| ||  | |||||||||||||    
T  17693406 aagcgttgttcctcctgggaattgaacccggtactccccgagtacgtccttggaaggggctccttgccactagaaactaagcaacttggtt 17693496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 42291532 - 42291634
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| |||||||||||||||||  |||||||||||| ||||||  |||||||||  |||||||||||| |||| |||||| ||| |    
T  42291532 ggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaacccggtattctccgggtacgtctttgca 42291631  T
Q  135 agg 137  Q
    |||    
T  42291632 agg 42291634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 150
Target Start/End: Complemental strand, 13664318 - 13664225
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccac 150  Q
    ||||||||||||||| |||||||||||  ||||||| ||||  ||| ||| |||||||||||  |||||||||||| ||||||||||| |||||    
T  13664318 tgcgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaatccggtattccctagatacgtccttggaaggagctccttgccac 13664225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 14974351 - 14974485
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| || ||||||||||||||  ||||||||||   ||||||| | |  |||| ||||||| ||||| ||||||||||||||  |    
T  14974351 ggtggacgactaatccggctcatgcgtagaggcatgtgcactggccaaatgttgttcccctttagaatcgaacccgatattctccggatacgtccttaga 14974450  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | |||||||| ||||  ||||||||||||||||||||    
T  14974451 atgagctccttgcca--ggagcccaagcaacttggtt 14974485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 16755109 - 16755005
Alignment:
Q  68 catgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaact 166  Q
    ||||| |||||||||||  ||||| ||||||  ||| |||||| |||||||| ||||||||| ||| || |||||||| ||||||| |||||||| ||||    
T  16755109 catgcgcactggccaagtgttgtttctcctgaaaatcgaacccagtattccccggatacgtctttggaaagagctccttgccactgaagcccaaggaact 16755010  T
Q  167 tggtt 171  Q
    |||||    
T  16755009 tggtt 16755005  T

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Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 172
Target Start/End: Original strand, 38297012 - 38297128
Alignment:
Q  57 gtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggag 155  Q
    ||||||||| | |||| ||||| |||| | ||||||| | |||||||||||||||||||||| |   ||| |||||  ||||||||||| ||||||||||    
T  38297012 gtgcgtagaagaatgcgcactgaccaaacgttgttccccttgggaattgaacccggtattcctcaagtacatccttagaaggagctccttgccactggag 38297111  T
Q  156 cccaagcaacttggttt 172  Q
    ||||| ||| |||||||    
T  38297112 cccaaacaatttggttt 38297128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 18262645 - 18262728
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc 119  Q
    |||||||||||| ||||| ||||| ||||||| |||| |||||| ||||| ||||||| ||||  ||| |||||||||||||||    
T  18262645 ggtgggcgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgttgttccccctgaaaatagaacccggtattccc 18262728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 17 - 171
Target Start/End: Original strand, 18294492 - 18294646
Alignment:
Q  17 tggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt 116  Q
    |||||||| |||||| |  | ||||||| || |||||||| || ||||||| |||| ||||| |||||| ||||||| |||||  |||||||||||||||    
T  18294492 tggtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgttcc-cctggatattgaacccggtatt 18294590  T
Q  117 c-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | |||  || ||||||| |||||| |||| | ||||| || |||| ||||||||||    
T  18294591 ctccgagtatgtccttggaaggagttccttgtcactgaagtccaaacaacttggtt 18294646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 55 - 117
Target Start/End: Original strand, 35006781 - 35006843
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    |||||||||||||||||||||||| |||||| |||||||  || ||||| |||||||||||||    
T  35006781 tcgtgcgtagaggcatgcacactgaccaagcgttgttccctctcggaatggaacccggtattc 35006843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 35561819 - 35561981
Alignment:
Q  10 ttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacc 109  Q
    ||||||||| ||||| ||| || |  |||| ||||||| || || || || |||||||||||| |||||| || |  |||||||  |||| | | ||||     
T  35561819 ttcacactgatttccgacctaccaacggtgagcgactaatctggctcatgtgtagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaact 35561918  T
Q  110 cggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || ||||||| ||||||||| ||| ||||||||| | |||||||||| |||||||||||||||    
T  35561919 cgatattccccggatacgtcattggaaggagctctttgccactggagtccaagcaacttggtt 35561981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 60 - 172
Target Start/End: Complemental strand, 2485252 - 2485140
Alignment:
Q  60 cgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagccc 158  Q
    ||||||||||||| ||| |||| ||  ||||||| ||| ||||| |||||| |||||||| || |||||||||| || |||||||| |||| ||||| ||    
T  2485252 cgtagaggcatgcgcacaggcccagggttgttcc-cctaggaatcgaacccagtattccctgaatacgtccttggaatgagctccttgccattggagtcc 2485154  T
Q  159 aagcaacttggttt 172  Q
    || |||||||||||    
T  2485153 aaacaacttggttt 2485140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 15034133 - 15034048
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctc 142  Q
    ||||||||||||||||||||| |||||  ||||| | | ||| |||||||||||||||| ||||| ||| |||||| |||||||||    
T  15034133 tgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggtattccccgggtacatccttggaaggagctc 15034048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 40 - 93
Target Start/End: Complemental strand, 25453001 - 25452948
Alignment:
Q  40 ggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcc 93  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||| |||||||||    
T  25453001 ggcgactaatccggctcgtgcgtagaggcatgcacactggtcaaacattgttcc 25452948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 168
Target Start/End: Original strand, 35813025 - 35813158
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaa 134  Q
    ||||| |||||| ||||  || || |||||| ||||| |||||| |||||||| || | ||| ||||| |||||||||||||| ||| |||||||||| |    
T  35813025 ggtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatcgaacccggtattcctcgggtacgtccttgga 35813124  T
Q  135 aggagctcctcgccactggagcccaagcaacttg 168  Q
    | ||||| || ||||| | ||||||| |||||||    
T  35813125 atgagcttcttgccaccgcagcccaaacaacttg 35813158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 42 - 174
Target Start/End: Complemental strand, 41801051 - 41800918
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagc 140  Q
    |||||| ||||| |||||||||||| ||||| || ||| ||||| ||||||| | || |||| ||||||| |||| ||| |||||||| |||||||||      
T  41801051 cgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaacccgatattccccagatacgtcattgaaaggaat 41800952  T
Q  141 tcctcgccactggagcccaagcaacttggtttat 174  Q
    ||||  |||| |||| |||| |||||| ||||||    
T  41800951 tccttaccacgggagtccaaacaacttagtttat 41800918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 157
Target Start/End: Complemental strand, 14152104 - 14152008
Alignment:
Q  62 tagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcc 157  Q
    |||| ||||||||||||||||||| |||||||   || |||| |||||||||||| ||| | ||| || ||| ||||||||||| ||||||||||||    
T  14152104 tagaagcatgcacactggccaagcgttgttccctatgagaatcgaacccggtattccccaggtacatcattggaaggagctccttgccactggagcc 14152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 39099771 - 39099868
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctg 98  Q
    |||||||| ||  ||| ||||||| |||||| |  |||||||||||| ||||| || ||||||||||||||  |||||||||||  ||||||| ||||    
T  39099771 tttttggcttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgttccccctg 39099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 1826920 - 1826800
Alignment:
Q  54 ttcgtgcgtagaggcatgcacactggccaagcattgtt-cctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccact 151  Q
    |||||||  |||||||||  || ||||||||| ||||| ||||||| |||| ||||| | ||||||| || |||||| ||| ||||||||| | || |||    
T  1826920 ttcgtgctcagaggcatgtgcagtggccaagcgttgtttcctcctgagaatcgaacctgatattccccgagtacgtctttggaaggagctcattgctact 1826821  T
Q  152 ggagcccaagcaacttggttt 172  Q
    | ||||||| |||||||||||    
T  1826820 gaagcccaaacaacttggttt 1826800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 20255449 - 20255313
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaa 134  Q
    ||||| |||||| ||||  || ||||||||||||||| |||||| ||||  |||||| ||||| |    || |||||||||||| || |||||||||  |    
T  20255449 ggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttcgtcctgagttacgaccccggtattccccgagtacgtccttaga 20255350  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | |||||||| |||||  |||||||| ||||||||||    
T  20255349 atgagctccttgccaccagagcccaaacaacttggtt 20255313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 92
Target Start/End: Original strand, 24463913 - 24463969
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttc 92  Q
    |||||||||||| ||||| |||||| ||||||||||| |||||||||| | ||||||    
T  24463913 ggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttc 24463969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 55 - 119
Target Start/End: Complemental strand, 38369760 - 38369697
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc 119  Q
    |||||||||||||||||| |||||||||||  ||||||| |||| |||| ||||||| |||||||    
T  38369760 tcgtgcgtagaggcatgcgcactggccaagtgttgttcc-cctgagaatcgaacccgatattccc 38369697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 40 - 91
Target Start/End: Original strand, 6764488 - 6764539
Alignment:
Q  40 ggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgtt 91  Q
    |||||||| ||||| |||||||||||||||||| |||| ||||| |||||||    
T  6764488 ggcgactaatccggctcgtgcgtagaggcatgcgcactagccaaacattgtt 6764539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 168
Target Start/End: Complemental strand, 20692974 - 20692880
Alignment:
Q  75 actggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    ||||||||||| ||||| |  || |||||  ||||||||||| ||||| |||||||||| ||| ||||| | |||||| |||||||| |||||||    
T  20692974 actggccaagcgttgtttcctctaggaatcaaacccggtattccccgggtacgtccttggaagaagctctttgccactagagcccaaacaacttg 20692880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 40117482 - 40117432
Alignment:
Q  49 tccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgg 99  Q
    ||||| || ||||||||||||||| |||||||||||| ||||||| |||||    
T  40117482 tccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgg 40117432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 37 - 98
Target Start/End: Complemental strand, 43399207 - 43399146
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctg 98  Q
    |||| |||||| ||| | |||||||||||||||||| |||||||||||| || |||| ||||    
T  43399207 gtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttattccccctg 43399146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 100; Significance: 1e-49; HSPs: 39)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 21898766 - 21898595
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| ||||||||  ||||  |||||| ||||| || ||||||||||||||| |||||||||||| ||||||||||||||    
T  21898766 tttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggg 21898667  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  21898666 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 21898595  T

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Target: chr6; HSP #2
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 6606089 - 6606262
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| | |||||| |||||| ||||| || |||||||||||||| ||||||||||||  ||||||| |||| |    
T  6606089 tttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgag 6606188  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||||||| |||||||||||||||| ||||||||||| |||||||  |||||||||||||||||||    
T  6606189 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactgtggcccaagcaacttggttta 6606262  T

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Target: chr6; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 8611966 - 8612139
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||  |||||| |  |||||||||||| |||||||| |||||||| ||||||||||||| ||||| ||||||||||| ||    
T  8611966 tttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcgg 8612065  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| |||||||||| |||| ||||||||||||    
T  8612066 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttta 8612139  T

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Target: chr6; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 14107350 - 14107523
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||||| |  |||||||||| ||||| || ||||||||||||||  |||||| ||||| ||||||||||||||    
T  14107350 tttttggctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctggg 14107449  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||||||| |||| ||||||| ||| ||||||||||| ||||||||||||||| ||||||||||||    
T  14107450 aatcgaacccggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaacttggttta 14107523  T

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Target: chr6; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 13469051 - 13468880
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| |||||||||||||| | ||||||||||||| || || |||||||||||||||||  ||||| |||| | ||||||| ||| ||    
T  13469051 tttttggctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccctagg 13468952  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||||| |||||| |||||||||||||||| ||||||||||| |||||  |||||||||||||||||||    
T  13468951 aattgaacctggtattccccggatacgtccttggaaggagctccttgccaccagagcccaagcaacttggtt 13468880  T

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Target: chr6; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 5253215 - 5253386
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| |  ||||||||| || ||||| || ||||||||||||||| |||||||||||  ||||||| ||||||    
T  5253215 ttttttgctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggg 5253314  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  5253315 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 5253386  T

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Target: chr6; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 19089616 - 19089445
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| |  ||| | |||||| ||||| |||||||||||||||||| |||||||||||  ||||||| ||||||    
T  19089616 tttttggctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctggg 19089517  T
Q  101 aattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||  |||| |||||||| ||||||||||||||||| |||||||| || |||||||||||||||||||||||    
T  19089516 aatcaaacctggtattcctcggatacgtccttgaaatgagctccttgcgactggagcccaagcaacttggtt 19089445  T

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Target: chr6; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 44 - 174
Target Start/End: Original strand, 24671901 - 24672032
Alignment:
Q  44 actagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctc 142  Q
    |||| ||||| | ||||||||||||||||||||||| ||||  |||||||  |||||||| ||||||||||||| || ||||||||||||||||||||||    
T  24671901 actaatccggcttgtgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaacccggtattctccagatacgtccttgaaaggagctc 24672000  T
Q  143 ctcgccactggagcccaagcaacttggtttat 174  Q
    || |||||||||||||||||||||||||||||    
T  24672001 cttgccactggagcccaagcaacttggtttat 24672032  T

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Target: chr6; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 2271330 - 2271465
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaa 134  Q
    ||||| |||||| ||||| |||||||||||| ||||| ||||||| |||| ||||||   ||| |||| ||||||||||||||| || |||||||||| |    
T  2271330 ggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgttct--ctgagaatcgaacccggtattccccgaatacgtccttgga 2271427  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttt 172  Q
    |||||||||| |||||||||||||||||||||||||||    
T  2271428 aggagctccttgccactggagcccaagcaacttggttt 2271465  T

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Target: chr6; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 13035996 - 13036164
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| | | |||| |||||| || || || ||||||||||||||| |||||||||||  ||||||| ||||      
T  13035996 ttttttgctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaa 13036095  T
Q  101 aattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    ||| ||||||| ||||||| || |||||||||| ||||||||||| |||||||||||||||||||||||    
T  13036096 aatcgaacccgatattccccgaatacgtccttggaaggagctccttgccactggagcccaagcaacttg 13036164  T

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Target: chr6; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 9179763 - 9179900
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    ||||| |||||| ||| | || |||||||||| ||||| ||||| ||||  ||||||| ||||||||| ||||||||||||||| || |||||||||| |    
T  9179763 ggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatcgaacccggtattccctgggtacgtccttgga 9179862  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttt 172  Q
    | |||||||| ||||||||||||||| |||||||||||    
T  9179863 atgagctccttgccactggagcccaaacaacttggttt 9179900  T

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Target: chr6; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 12606548 - 12606375
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| |||||||| | ||| |  |||||||||||| ||||| |||||||||||||||||| |||||||||| | ||||||| |||||     
T  12606548 tttttggctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctgga 12606449  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| ||| | |||||| ||||||||||| |||| ||||||||| | ||||   |||||||||||| ||||||||    
T  12606448 aatcgaatctggtattccccggatacgttcttggaaggagctcattgccagcagagcccaagcaatttggttta 12606375  T

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Target: chr6; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 19230592 - 19230720
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagct 141  Q
    |||||| ||||| ||||||||||||||||||| |||| |||||| ||||||| | ||  ||| ||| ||||||||||||  |||||||||| ||||||||    
T  19230592 cgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttgttcc-cttgaaaatcgaatccggtattcccgagtacgtccttggaaggagct 19230690  T
Q  142 cctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||||||||||| ||||||||||    
T  19230691 ccttgccactggagcccaaacaacttggtt 19230720  T

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Target: chr6; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 29444757 - 29444928
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| |||| |||||| |||||| |  | ||| | |||| ||||| || ||||||||||||||| |||||||||||| ||||||| ||| |     
T  29444757 tttttggctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctaga 29444856  T
Q  101 aattgaacccggtat-tcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||  ||||| |||||| ||| ||||||||||| |||||| ||||||||| |||||||||    
T  29444857 aatcgaacccggtatcccccgggtacgtctttggaaggagctccttgccactagagcccaagtaacttggtt 29444928  T

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Target: chr6; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 10311515 - 10311633
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||| ||||| |||||||||||| ||||||| | || | || ||||||||||||||| |||||||| |||| ||||||||||| || |||||    
T  10311515 tcgtgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatacgttcttggaaggagctccttgctactgg 10311614  T
Q  154 agcccaagcaacttggttt 172  Q
    |||||||||||| ||||||    
T  10311615 agcccaagcaacatggttt 10311633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 12635932 - 12635792
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| | | ||||||||||| ||||| | |||||||||||||||| |||| ||||||| ||||| | ||||||    
T  12635932 tttttggctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctggg 12635833  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagc 140  Q
    |||  |||| |||||| |||||||||||||||| |||||||    
T  12635832 aatcaaacctggtattccccggatacgtccttggaaggagc 12635792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 30788845 - 30789010
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| |  |||||||||||| ||||| |||||| ||||||||||| |||||||||| | ||||||  | || |    
T  30788845 tttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgttc--catgag 30788942  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    |||  |||||| |||| ||||||||| |||||| ||||||||||| |||||||| | |||||||||||    
T  30788943 aatcaaacccgatattccccggatacatccttggaaggagctccttgccactggggtccaagcaactt 30789010  T

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Target: chr6; HSP #18
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 8932779 - 8932608
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||  |  |||||| || || ||||| || ||||||||||||||| |||| ||||||  ||||||| ||||||    
T  8932779 tttttggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctggg 8932680  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||| |||| ||||||||| |||||| ||||| ||||| ||||||||||  ||| ||||||||||    
T  8932679 aatcgaacccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8932608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 8944245 - 8944074
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||  |  |||||| || || ||||| || ||||||||||||||| |||| ||||||  ||||||| ||||||    
T  8944245 tttttggctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctggg 8944146  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||| |||| ||||||||| |||||| ||||| ||||| ||||||||||  ||| ||||||||||    
T  8944145 aatcgaacccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8944074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 29333188 - 29333301
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||| |||||||||| | ||||||| ||||| ||| ||||||||||||||| || |||||||||| ||||||||| | |||||| ||||    
T  29333188 tgcgtagaggcatgcgcactggccaaacgttgttcc-cctggaaatcgaacccggtattccctgggtacgtccttggaaggagctcattgccactagagc 29333286  T
Q  157 ccaagcaacttggtt 171  Q
    |||| ||||||||||    
T  29333287 ccaaacaacttggtt 29333301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 3601202 - 3601034
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| |  ||||| |||||| ||||| ||||| ||| |||||||| |||||||||||| ||||||| |||| |    
T  3601202 ttttttgctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgag 3601103  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    ||| ||| |||||||| |||| ||||||  ||| || |||||| | |||||| ||||||||||||||||    
T  3601102 aatcgaaaccggtattccccgaatacgtatttggaaagagctctttgccactagagcccaagcaacttg 3601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 42 - 172
Target Start/End: Original strand, 3587978 - 3588109
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagc 140  Q
    |||||| |||||||| |||||||||| |||  |||||||||||| ||||||| | ||||||| ||||||||||||| ||||||||||| ||| ||  | |    
T  3587978 cgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaacccggtattctccggatacgtctttggaataaac 3588077  T
Q  141 tcctcgccactggagcccaagcaacttggttt 172  Q
    |||| |||||| |||||||| |||||| ||||    
T  3588078 tccttgccacttgagcccaaacaacttagttt 3588109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 21016804 - 21016914
Alignment:
Q  62 tagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaa 160  Q
    ||||||||||||||||| | |||  ||||||  | | ||||| ||||||||||||||| || ||||||| || ||||||||||| |||||||||||||||    
T  21016804 tagaggcatgcacactgactaagtgttgttctccttaggaatcgaacccggtattccccgggtacgtccctggaaggagctccttgccactggagcccaa 21016903  T
Q  161 gcaacttggtt 171  Q
    |||||||||||    
T  21016904 gcaacttggtt 21016914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 95 - 172
Target Start/End: Original strand, 15643915 - 15643992
Alignment:
Q  95 cctgggaattgaacccggtattcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    |||| |||| ||||||| ||||||| |||||||||||| || |||||||| |||||||||||||||||||||||||||    
T  15643915 cctgtgaatcgaacccgttattcccagatacgtccttggaatgagctccttgccactggagcccaagcaacttggttt 15643992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 8938794 - 8938658
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    ||||| |||||| | ||| || |||||||| || ||| |||||| ||||  ||||||||||||||||| |||||  |||||||| ||||| ||| ||| |    
T  8938794 ggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcgaaccaagtattccccggatatgtctttgga 8938695  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| | ||||||||||||| ||||||||||    
T  8938694 aggagctccttgtcactggagcccaaacaacttggtt 8938658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 173
Target Start/End: Complemental strand, 5759660 - 5759573
Alignment:
Q  87 ttgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||||||||| |||||  |||||| |||||| ||| |||||||||| |||||| |||| ||||||||||||||||||||||||||||    
T  5759660 ttgttcctcctcggaatcaaacccgatattcctcgggtacgtccttggaaggagttccttgccactggagcccaagcaacttggttta 5759573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 9633617 - 9633708
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttc 92  Q
    |||||||| ||| ||| ||||||| |||||| |  |||||||||||| ||||| |||||||||||||||||| |||||||||||| ||||||    
T  9633617 tttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 33940088 - 33939958
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagc 140  Q
    |||||| ||||| ||||| |||||||||||| || |||  ||| ||||||||||||| ||||  ||||| ||||||| |||||||||||||  ||| |||    
T  33940088 cgactaatccggctcgtgtgtagaggcatgcgcaatggttaagtattgttcctcctgagaatcaaacccagtattcctcggatacgtccttagaagtagc 33939989  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    ||||  ||| ||||||| |||||||||||||    
T  33939988 tcctttccattggagccaaagcaacttggtt 33939958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 3030696 - 3030781
Alignment:
Q  87 ttgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||| ||||||||| ||||||| |||||||| | |||||||||| || |||||||| ||||||||||||||| ||||||||||    
T  3030696 ttgttccccctgggaatcgaacccgatattcccgaaatacgtccttggaatgagctccttgccactggagcccaaacaacttggtt 3030781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 17114924 - 17115060
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    |||||||||||| ||||| || ||||||||||||||  || ||||||||| |||||||| || ||||| |||  |  ||||| ||   |||||||||| |    
T  17114924 ggtgggcgactaatccggctcatgcgtagaggcatgtccattggccaagcgttgttccttctaggaatcgaattcaatattctccatgtacgtccttgga 17115023  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||| || ||||||||||||||||||| ||||||    
T  17115024 aggagcttcttgccactggagcccaagcaatttggtt 17115060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 164
Target Start/End: Original strand, 9366454 - 9366579
Alignment:
Q  40 ggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaagga 138  Q
    |||| ||| ||||| |||||||||||||||||| |||||||||||| || |||| |||   ||| ||||| | |||||||  | ||| |||||| |||||    
T  9366454 ggcgtctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatcgaacctgatattccccaagtacatccttggaagga 9366553  T
Q  139 gctcctcgccactggagcccaagcaa 164  Q
    |||||| | |||||||||||||||||    
T  9366554 gctccttgtcactggagcccaagcaa 9366579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 79 - 174
Target Start/End: Original strand, 26476433 - 26476529
Alignment:
Q  79 gccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    ||||||| ||||||||||||  ||| | ||||| ||||| || | |||||||||| |||||||||||||| |||| |||||||||||||| ||||||    
T  26476433 gccaagcgttgttcctcctgaaaatcgtacccgatattctccaggtacgtccttggaaggagctcctcgcaactgaagcccaagcaacttcgtttat 26476529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 58 - 168
Target Start/End: Complemental strand, 9147362 - 9147251
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||  |||||| ||||  | ||||| ||||||||| ||||||| |||||||  | |||||||||| || ||||||||  ||||||||||    
T  9147362 tgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccaggtacgtccttggaatgagctccttcccactggagc 9147263  T
Q  157 ccaagcaacttg 168  Q
    |||| |||||||    
T  9147262 ccaaacaacttg 9147251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 13391367 - 13391312
Alignment:
Q  38 tgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcc 93  Q
    |||||||||| ||||| |||||||||||||||||| |||||||||| |||||||||    
T  13391367 tgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgttcc 13391312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 14783412 - 14783494
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaa 83  Q
    |||||||| ||| ||| ||||||| |||||| | |||||| |||||| ||||| || |||||||||||||||||||| |||||    
T  14783412 tttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactagccaa 14783494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 36 - 160
Target Start/End: Original strand, 34954646 - 34954770
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaa 134  Q
    ||||| |||||| || || || |||||||||| |||  |||||||||| | ||||||| |||| |||| ||||| |||||||||  | |||||||||| |    
T  34954646 ggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaacctggtattccccaggtacgtccttgga 34954745  T
Q  135 aggagctcctcgccactggagcccaa 160  Q
    |||||||||| |||| ||||||||||    
T  34954746 aggagctccttgcca-tggagcccaa 34954770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Original strand, 7300211 - 7300261
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagc 85  Q
    ||||| ||||||  ||||| ||||||| |||||||||||||||||||||||    
T  7300211 tggtgagcgactcatccggctcgtgcgcagaggcatgcacactggccaagc 7300261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 424501 - 424460
Alignment:
Q  38 tgggcgactagtccggttcgtgcgtagaggcatgcacactgg 79  Q
    ||||||| || |||||||||||||||||| ||||||||||||    
T  424501 tgggcgattaatccggttcgtgcgtagagacatgcacactgg 424460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4596239 - 4596187
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccgg 53  Q
    ||||| || ||| |||||||||||||||||||| |||||| |||||| |||||    
T  4596239 ttttttgccttcgcactggtttccaacccactaatggtggacgactaatccgg 4596187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 3e-47; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7747388 - 7747217
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| ||||||||  ||||  |||||| ||||| || |||||||||||||||||||||||||| | ||||||||||| ||    
T  7747388 tttttggctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctagg 7747289  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  7747288 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 7747217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 41031898 - 41032068
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||||||||||| |||||| |  |||||| ||||| ||||| ||||||||||||||||||||||||||||||  ||||||| ||||||    
T  41031898 tttttagctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggg 41031997  T
Q  101 aattgaacccggtattcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||||| ||||| | |||||||||| ||||||||||| ||||||||||||||||||| ||||||    
T  41031998 aatcgaacccggtgttccctggtacgtccttggaaggagctccttgccactggagcccaagcaatttggtt 41032068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 331615 - 331444
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| |||| ||||||||||||||||| |  |||||||||||| ||||| || |||||||| |||||| |||||||||||  ||||||| ||||||    
T  331615 tttttggctttcatactggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctggg 331516  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||||| |||||||||| || |||||| | ||||||||||||||||||||||||||    
T  331515 aatcgaacccggtattccccgggtacgtccttggaaagagctcattgccactggagcccaagcaacttggtt 331444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 44139598 - 44139427
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| ||||||||||||||| ||||| ||||||||||||||| || |||||||||||| ||||||| ||||||    
T  44139598 ttttttgctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctggg 44139499  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||| ||| | |||||| |||||| ||||| |||||||||||||||||||||||||    
T  44139498 aatcgaacccggtattccccagatgcatccttggaaggagttcctcaccactggagcccaagcaacttggtt 44139427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 8410209 - 8410074
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaa 135  Q
    ||||||||||| ||||| |||||||||||||||||| |||||||||||  ||||||| ||||||||| ||||||| ||||| |||| |||||||||| ||    
T  8410209 gtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaa 8410110  T
Q  136 ggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||||| ||||||||||||||||||||||||||    
T  8410109 ggagctccttgccactggagcccaagcaacttggtt 8410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 2550946 - 2550811
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaa 135  Q
    ||||||||||| ||||| || ||||||||| ||||| ||||||| |||  ||||||||||||||||| ||||||| ||||||| ||||||||||||| ||    
T  2550946 gtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcgaacccgatattccccggatacgtccttgtaa 2550847  T
Q  136 ggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||||| ||||||||||||||||||||||||||    
T  2550846 ggagctccttgccactggagcccaagcaacttggtt 2550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 10823174 - 10823030
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| |  |||||||||||| ||||| |||||||||||||||||| |||||||||||| ||||||||||||||    
T  10823174 tttttggctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctggg 10823075  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcct 144  Q
    |||  ||||||||||| ||||| |||||||||| |||||||||||    
T  10823074 aatcaaacccggtattccccgggtacgtccttggaaggagctcct 10823030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 38962842 - 38962706
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    ||||| |||||| |||||||| ||||||||||||||| |||||||||||| ||||||||||||  ||| |||||||||||| ||||||||||||||||||    
T  38962842 ggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcgaacccggtattccccggatacgtccttgaa 38962743  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | ||||||||  ||||||||| |||| ||||||||||    
T  38962742 atgagctccttaccactggagtccaaacaacttggtt 38962706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 42770678 - 42770814
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaa 134  Q
    ||||| ||| || ||||| ||||||| |||||||||| |||||||||||| ||||||| |||| ||||||||||||||| ||| |||||||||||||| |    
T  42770678 ggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggtatttctcggatacgtccttgga 42770777  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||| | ||||||||||||||||||||||||||    
T  42770778 aggagctctttgccactggagcccaagcaacttggtt 42770814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 18902539 - 18902693
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| |  |||||||||||| || || |||||||||||| || || |||||| ||||| ||||||| | ||||||| |||||||||||||    
T  18902539 ggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaacccggtattc 18902638  T
Q  118 ccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || || |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  18902639 cccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 18902693  T

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Target: chr2; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 41220749 - 41220595
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| ||||||||  ||||  |||||| | ||| || ||||||||||||||| |||||||||||| ||||||||||||||    
T  41220749 tttttggctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggg 41220650  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactgga 154  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| |||||||||    
T  41220649 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgga 41220595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 38005481 - 38005345
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||||||||||| ||||| || || |||||||||||| |||||||||||| ||||||| | ||||||| |||||| ||||| ||||| |||||||||| |    
T  38005481 ggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccagtattccccgggtacgtccttgga 38005382  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  38005381 aggagctccttgccactggagcccaaacaacttggtt 38005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 10026608 - 10026779
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || |||||||| |||||| |||||| |  ||||| |||||| ||||| || ||||||||||||||| |||||||||| | ||||||| |||| |    
T  10026608 ttttttgctttcacactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgag 10026707  T
Q  101 aattgaacccggta-ttcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||| || |||  |||||||||| ||||||||||| |||| |||||||||||||||||||||    
T  10026708 aatcgaacccggtattttccgagtacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 10026779  T

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Target: chr2; HSP #14
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 21286541 - 21286390
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    |||||||||||||| | || || | ||||| ||| | |||||||||||||||||| |||||| ||||| ||||| | ||||||||| ||||||||||||     
T  21286541 ggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggtattc 21286442  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    |||||||||||||||| ||||||||||| ||||||||||| ||| |||||||    
T  21286441 cccggatacgtccttggaaggagctccttgccactggagctcaaacaacttg 21286390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 38 - 167
Target Start/End: Complemental strand, 7787133 - 7787003
Alignment:
Q  38 tgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaag 136  Q
    |||||||||| ||||| ||||||||||||||||||  |||||||||| |||||||| ||||| ||| |||||||||||| ||||| |||||||| |||||    
T  7787133 tgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggtattccccgggtacgtcctagaaag 7787034  T
Q  137 gagctcctcgccactggagcccaagcaactt 167  Q
    ||| |||| ||||||||||||||| ||||||    
T  7787033 gagttccttgccactggagcccaaccaactt 7787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 10 - 167
Target Start/End: Complemental strand, 27726045 - 27725887
Alignment:
Q  10 ttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacc 109  Q
    ||||||| ||||||| |||||| ||||||||||||||| ||||| | |||||||||||||||| ||||||||||||||||||||||||| ||||  |||     
T  27726045 ttcacaccggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttcctcctgagaatcaaact 27725946  T
Q  110 cggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    || ||||||| || ||||| |||||||| |||||||| |||| | || |||| ||||||    
T  27725945 cgatattccccgagtacgttcttgaaagaagctcctcaccacggaagtccaaacaactt 27725887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 171
Target Start/End: Complemental strand, 44945704 - 44945537
Alignment:
Q  4 ttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaat 103  Q
    ||||| ||| ||| ||||||| | ||||||  |||||||||||| ||||| |||||||||||||||||| ||||  |||||| |||||||| ||||||||    
T  44945704 ttggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgttcct-ctgggaat 44945606  T
Q  104 tgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
      ||||| |||||| |||  |||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  44945605 caaacccagtattctccgagtacgtccttggaaggagctccttgccacttgagcccaagcaacttggtt 44945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 3643914 - 3644052
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    ||||| |||||| ||| | || ||||||||||||||| |||||||||||| ||||||||| | | |||  |||||||||||||| ||||||||||||| |    
T  3643914 ggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaacccggtattccccggatacgtccttgga 3644013  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    | ||||||||  |||||||||||||||||||||||||||    
T  3644014 atgagctcctttccactggagcccaagcaacttggttta 3644052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 22593213 - 22593078
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    ||||| |||||| ||||| || ||||||||||||||| |||||||||| | ||||||| ||||||||| |||| | |||||||| || |||||||||| |    
T  22593213 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaactcagtattccccgggtacgtccttgga 22593115  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  22593114 aggagctccttgccactggagcacaagcaacttggtt 22593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 49 - 168
Target Start/End: Original strand, 45263707 - 45263827
Alignment:
Q  49 tccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgc 147  Q
    ||||| |||||||||||||||||| |||||||||||| |||||||  |||||||| |||||||||||| ||||||||  |  ||||||||||||||| ||    
T  45263707 tccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggataaatttttgaaaggagctccttgc 45263806  T
Q  148 cactggagcccaagcaacttg 168  Q
    ||||||||||||| |||||||    
T  45263807 cactggagcccaaacaacttg 45263827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 43 - 173
Target Start/End: Original strand, 13026445 - 13026576
Alignment:
Q  43 gactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagct 141  Q
    ||||| ||||| || ||||||||||||||| |||||||||| ||||||||||||||  ||| ||||||| ||||||| ||||||||||||| |||||| |    
T  13026445 gactaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatattccctggatacgtccttggaaggagtt 13026544  T
Q  142 cctcgccactggagcccaagcaacttggttta 173  Q
    ||| ||||||||||  ||| ||||||||||||    
T  13026545 ccttgccactggagttcaatcaacttggttta 13026576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 25540396 - 25540551
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| |  ||||| |||||| ||||| |||||||||||||||||| |||||||||||| ||||||| ||| ||    
T  25540396 ttttttgctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctagg 25540495  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggag 155  Q
    ||| |||||| ||||| ||| |||||||||||| || |||||||| ||||||||||    
T  25540496 aatcgaacccagtattccccagatacgtccttggaatgagctccttgccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 173
Target Start/End: Complemental strand, 35946834 - 35946680
Alignment:
Q  19 gtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-c 117  Q
    |||||| |||||| | |||||| |||||| ||||| ||||||||||||||||||||| ||||||||| ||||||| ||| ||||| |||| ||||||| |    
T  35946834 gtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttcc-cctaggaatcgaactcggtattcc 35946736  T
Q  118 ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||||||||||||  || ||||||||  |||| | ||||||||||||||| ||||    
T  35946735 ccggatacgtccttagaatgagctccttaccacggaagcccaagcaacttgtttta 35946680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 20612526 - 20612699
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtcc-ggttcgtgcgtagaggcatgcacactggccaagcattgttcc-tcctg 98  Q
    |||||||  ||| ||| ||||||| |||||| | |||||| |||||| ||| || || ||| ||||||||||| |||||||||||  ||||||| |||||    
T  20612526 tttttggttttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctg 20612625  T
Q  99 ggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
     |||| ||||||||||||||| || |||  ||||| ||||||||||| ||||||||||||||||||||||||||    
T  20612626 agaatcgaacccggtattccccgaatacaaccttggaaggagctccttgccactggagcccaagcaacttggtt 20612699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 33005808 - 33005693
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||| |||||||||||  ||||||| ||||||||  |||||||||||||| ||| |||||||| |||| |||||||| |||||||||||    
T  33005808 tgcgtagaggcatgcgcactggccaagtgttgttcc-cctgggaacagaacccggtattccacgggtacgtcctagaaatgagctccttgccactggagc 33005710  T
Q  157 ccaagcaacttggttta 173  Q
    |||||||| ||||||||    
T  33005709 ccaagcaatttggttta 33005693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 42 - 173
Target Start/End: Original strand, 39201541 - 39201673
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagc 140  Q
    |||||| ||||| || |||||||||||||||||||||||||| ||||||||| |||| |||| |||  ||||||||| ||  |||||||||| |||||||    
T  39201541 cgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaattcggtattcctcgagtacgtccttggaaggagc 39201640  T
Q  141 tcctcgccactggagcccaagcaacttggttta 173  Q
    |||| ||||||  ||||||| ||||||||||||    
T  39201641 tccttgccactatagcccaatcaacttggttta 39201673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 10046469 - 10046639
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||  |||||||| |||||| |||||| |  ||||| |||||| ||||| || ||||||||||||||| ||||| | || | ||||| | | || |    
T  10046469 tttttggttttcacactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactgtcaaa-cgttgtttcccttgag 10046567  T
Q  101 aattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||||||||| |||||||||| |||| ||||||||||| |||| |||||||||||||||||||||    
T  10046568 aatcgaacccggtattctccggatacgttcttggaaggagctccttgccattggagcccaagcaacttggtt 10046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 21180346 - 21180477
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggag 139  Q
    ||||||| ||||| |||||||||||||||||  |||||||||||  ||||||  | ||||||| ||| |||||||||  ||| |||||||||| ||||||    
T  21180346 gcgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggag 21180445  T
Q  140 ctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| ||||||||||||||| ||||||||||    
T  21180446 ctccttgccactggagcccaaacaacttggtt 21180477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 10 - 171
Target Start/End: Original strand, 6358152 - 6358314
Alignment:
Q  10 ttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacc 109  Q
    ||||||| ||||| | |||||| | |||||| |||||| ||||| || ||||||||||||||| |||||||||||  ||||||| ||||| ||| ||| |    
T  6358152 ttcacaccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaatc 6358251  T
Q  110 cggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
     |||||| |||||||||||||||  || ||||| || ||||||||||||||| ||||| ||||    
T  6358252 tggtattccccggatacgtcctttgaatgagcttcttgccactggagcccaaacaactcggtt 6358314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 35 - 168
Target Start/End: Complemental strand, 16035017 - 16034883
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttga 133  Q
    ||||| ||||||| ||||| |||| |||| ||||||||||||||| ||||| ||||||| ||||  ||| |||||||||||||| ||||||||||||||     
T  16035017 tggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcgaacccggtattcctcggatacgtccttgg 16034918  T
Q  134 aaggagctcctcgccactggagcccaagcaacttg 168  Q
    |||||| ||||  |||||| || ||||||||||||    
T  16034917 aaggagttccttaccactgaagtccaagcaacttg 16034883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 29422294 - 29422156
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    ||||| |||||| ||||| ||||||||| ||| |||| || ||||||||  |||||||  |||| ||| |||||| |||||||| || ||||||||||||    
T  29422294 ggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaacccagtattccccgggtacgtccttgaa 29422195  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||||||||| || |||||||||||| ||||||||||||    
T  29422194 aggagctccttgctactggagcccaaacaacttggttta 29422156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 15079543 - 15079426
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||| |||||||||||| ||||| ||||||| ||||| ||| |||||| ||||| ||||| |||||||||| |||| | |||| ||||| ||    
T  15079543 tcgtgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggtgttccttgccaccgg 15079444  T
Q  154 agcccaagcaacttggtt 171  Q
    ||||||||||||||||||    
T  15079443 agcccaagcaacttggtt 15079426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 172
Target Start/End: Original strand, 2528393 - 2528505
Alignment:
Q  61 gtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagccca 159  Q
    |||||||||||||||||| |||||| ||||||| ||||||||| ||||||||| |||| ||  |||||||||| ||||||||| | ||||||||||||||    
T  2528393 gtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaacccggtgttcctcgagtacgtccttggaaggagctcattgccactggagccca 2528492  T
Q  160 agcaacttggttt 172  Q
    | ||| |||||||    
T  2528493 aacaatttggttt 2528505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34356320 - 34356149
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| |||| |||||| |||||  | |||||  ||| || ||||| || ||| ||||||||||| ||||| |||||  ||||||| |||||     
T  34356320 tttttggcattcgcactcgtttccgacccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctgga 34356221  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||| |||||||||||| ||  ||||||| ||||||||||||||| ||||||||||    
T  34356220 aatcgaacccggtattccccagatacgtccttggaaatagctccttgccactggagcccaaacaacttggtt 34356149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 12455424 - 12455306
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| | ||||| ||||||| ||||| |||||||||||||||||| ||||||| |||| ||||| | |||||     
T  12455424 tttttggctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctgga 12455325  T
Q  101 aattgaacccggtattccc 119  Q
    ||| |||||||||||||||    
T  12455324 aatcgaacccggtattccc 12455306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 12864321 - 12864167
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| |||||| | |||||| |||||| || || || |||| |||||||||| ||||| |||||  ||||||| ||||| ||| ||| ||||||||     
T  12864321 ggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaatccggtattc 12864222  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||| ||||||| ||| ||||||||||| | ||||||||||||| ||||||||||    
T  12864221 cccgaatacgtcattggaaggagctccttgtcactggagcccaaacaacttggtt 12864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 23500755 - 23500844
Alignment:
Q  82 aagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||| ||||||||||||||||| ||||||| ||||||| |||||||| ||| ||||||||||| ||||| ||||||||| ||||||||||    
T  23500755 aagctttgttcctcctgggaatcgaacccgatattccccgatacgtctttggaaggagctccttgccaccggagcccaaacaacttggtt 23500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 11069975 - 11069821
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| |||||| |  ||||| |||||| | | | ||||||||||||| |||| |||||||||| | ||||||| ||| ||||| ||||| ||||||     
T  11069975 ggtttccgacccaccaacggtggacgactaattcagctcgtgcgtagaggtatgcgcactggccaaacgttgttccccctcggaatcgaacctggtattc 11069876  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| |||||||||| || |||||||| |||| ||||||| || ||||||||||    
T  11069875 cccgggtacgtccttggaatgagctcctagccattggagccaaaacaacttggtt 11069821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 18649035 - 18649189
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    |||||||||||||| |   ||| ||||||| ||||  || ||||||||||||||| ||||| ||||  ||||||||||||| |||| ||| |||||||||    
T  18649035 ggtttccaacccaccaaaagtgagcgactaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatcgaatccggtattc 18649134  T
Q  118 cc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || | || | |||||| ||| |||| || ||||||||||||||| ||||||||||    
T  18649135 cctgaatgcatccttggaagcagcttcttgccactggagcccaaacaacttggtt 18649189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 160
Target Start/End: Original strand, 39806931 - 39807037
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    ||||| |||||||||||| |||||||||| | ||||| ||| ||||||| |||||||||||| ||||| |||||||||| |||||||  || ||||||||    
T  39806931 tcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattccccgggtacgtccttgtaaggagcatcttgccactgg 39807030  T
Q  154 agcccaa 160  Q
    |||||||    
T  39807031 agcccaa 39807037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 168
Target Start/End: Complemental strand, 37560252 - 37560119
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaa 134  Q
    ||||| ||| || ||||| |||||||||||||||||| ||||| |||| | ||||||| | || |||| ||||| |||||||| ||| |||||||||| |    
T  37560252 ggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaacctggtattcctcgggtacgtccttgga 37560153  T
Q  135 aggagctcctcgccactggagcccaagcaacttg 168  Q
    ||||||| ||  |||||||||||||| |||||||    
T  37560152 aggagcttcttaccactggagcccaaacaacttg 37560119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 49 - 172
Target Start/End: Complemental strand, 5035354 - 5035230
Alignment:
Q  49 tccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaaggagctcctcgc 147  Q
    |||||||||||||||||| ||||| |||||| |||||||||||  | |||||||| ||||||  || || |||||||||| |||  ||| ||||||  ||    
T  5035354 tccggttcgtgcgtagagacatgcgcactggtcaagcattgttttttctgggaatcgaacccaatattttccggatacgttcttagaagcagctccgtgc 5035255  T
Q  148 cactggagcccaagcaacttggttt 172  Q
    ||||||||||||| |||||||||||    
T  5035254 cactggagcccaaacaacttggttt 5035230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 53 - 168
Target Start/End: Complemental strand, 29802872 - 29802757
Alignment:
Q  53 gttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagctcctcgccactg 152  Q
    ||||||| |||||||||||  |||||||||| | ||||| ||| ||||||||||| ||| ||||| |||||||||| ||| || |||||| | ||||| |    
T  29802872 gttcgtgtgtagaggcatgtgcactggccaaacgttgtttctcatgggaattgaatccgatattctcggatacgtctttggaaagagctcattgccaccg 29802773  T
Q  153 gagcccaagcaacttg 168  Q
    ||| ||||||||||||    
T  29802772 gagtccaagcaacttg 29802757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 2149240 - 2149358
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaac-ccggtattcccg-gatacgtccttgaaaggagctcctcgccactg 152  Q
    |||||||||||||||||| |||||||||| | || |||| || | |||| |||| |||||||||||  ||||| |||||||||| || |||| |||||||    
T  2149240 tcgtgcgtagaggcatgcgcactggccaaacgttattcccccagtgaatcgaactccggtattccccagatacatccttgaaagaagttccttgccactg 2149339  T
Q  153 gagcccaagcaacttggtt 171  Q
    |||||||| ||||||||||    
T  2149340 gagcccaaacaacttggtt 2149358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 9360757 - 9360911
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    |||||||  |||||||  |||||||||||| | ||| |||||||||||||||||| |||||||||| | ||||| |  || | ||| ||||| ||||||     
T  9360757 ggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaatcgaacctggtattc 9360856  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| |||||||||| || ||| |||| ||| ||| ||||||||||| ||||||    
T  9360857 cccgggtacgtccttggaatgagatccttgcccctgaagcccaagcaatttggtt 9360911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 14169618 - 14169772
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| | |||| | |||||| ||||| || ||||||||| ||||| |||||| ||||  ||||||| || | |||| ||||||| |||||    
T  14169618 ggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaacccgatattc 14169717  T
Q  118 ccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || || |||||||||| || || ||||| | ||||||||||||| ||||||||||    
T  14169718 cccgaatacgtccttggaaagatctccttgtcactggagcccaaacaacttggtt 14169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 41 - 170
Target Start/End: Complemental strand, 41187923 - 41187793
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggag 139  Q
    ||||||| ||||  || ||||||||||||||| |||||| ||||| |||||  ||||  ||||||||  ||||||||| |||||||||||||| ||||||    
T  41187923 gcgactaatccgtctcatgcgtagaggcatgcgcactggtcaagcgttgtttttcctaagaattgaattcggtattcctcggatacgtccttggaaggag 41187824  T
Q  140 ctcctcgccactggagcccaagcaacttggt 170  Q
    ||||| ||||| | ||||||  |||||||||    
T  41187823 ctccttgccaccgaagcccagacaacttggt 41187793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 174
Target Start/End: Original strand, 37804940 - 37805057
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||| ||||||| |||| ||||||| || |||| |||| |||| ||| |||||||| | ||| ||||||||||  ||||| |||| ||||||| |||    
T  37804940 tgcgtagcggcatgcgcactagccaagcgttattccccctgtgaatcgaatccggtatttctcgggtacgtccttgggaggagttccttgccactgtagc 37805039  T
Q  157 ccaagcaacttggtttat 174  Q
    ||||||||||||||||||    
T  37805040 ccaagcaacttggtttat 37805057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16325709 - 16325602
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| | |||||| |||||| || || || |||||||||||||||||||||||||||  ||||||| ||||||    
T  16325709 ttttttgctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctggg 16325610  T
Q  101 aattgaac 108  Q
    ||| ||||    
T  16325609 aatcgaac 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 19976856 - 19976970
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||| ||||| ||||| |||| | || |||| ||||  ||| ||||||||||||||| ||||||||||||| || ||||| || |||||||||||    
T  19976856 tgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatcgaacccggtattccccggatacgtccttggaaagagctacttgccactggagc 19976955  T
Q  157 ccaagcaacttggtt 171  Q
    |||| ||| ||||||    
T  19976956 ccaaacaatttggtt 19976970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 34738342 - 34738487
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| ||| || |||||||| |||||| ||||  ||||||||||||||||         |||||| ||||||  | ||||||| ||| || ||||||    
T  34738342 ggtttccgacctaccattggtggacgactaatccgactcgtgcgtagaggcat---------ccaagcgttgttctccatgggaatcgaatccagtattc 34738432  T
Q  118 c-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | |||||||||||||| ||||| ||||||||||||||||| |||| |||||||||    
T  34738433 ctcggatacgtccttggaaggaactcctcgccactggagctcaagtaacttggtt 34738487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 10669652 - 10669535
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||| ||||| |||||||||||| ||||||  |||||||||  |||||||||   ||| | |||||||||| |||||| ||||  || ||||    
T  10669652 tcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccggtagcccccaggtacgtccttggaaggagatccttacccctgg 10669553  T
Q  154 agcccaagcaacttggtt 171  Q
    || |||||||||||||||    
T  10669552 agtccaagcaacttggtt 10669535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 63 - 171
Target Start/End: Original strand, 14853421 - 14853530
Alignment:
Q  63 agaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaag 161  Q
    |||||||| | ||||||||||   ||||||| ||||  ||| ||| | ||||||||| |||||| ||||||||||||| |||| |||||||||||||||     
T  14853421 agaggcatacgcactggccaaaagttgttccccctgaaaatcgaatctggtattccccggatacatccttgaaaggagttccttgccactggagcccaaa 14853520  T
Q  162 caacttggtt 171  Q
    ||||||||||    
T  14853521 caacttggtt 14853530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 167
Target Start/End: Complemental strand, 24179641 - 24179518
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagct 141  Q
    |||||| ||||| || ||||||||||||||  |||||||||| | ||||||| |||| |||| ||| |||||||||  || |||||||||| ||||||||    
T  24179641 cgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgttcc-cctgagaatcgaa-ccggtattcatgggtacgtccttggaaggagct 24179544  T
Q  142 cctcgccactggagcccaagcaactt 167  Q
    | | |||||| |||||||| ||||||    
T  24179543 ctttgccactagagcccaaacaactt 24179518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 40 - 176
Target Start/End: Complemental strand, 29653702 - 29653566
Alignment:
Q  40 ggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaagga 138  Q
    |||||||| | ||| |||||||||||||||||| ||||| |||||| |||||   ||||| ||| ||| |||||||| ||||| |||||||||| ||| |    
T  29653702 ggcgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaatccggtatttccggagtacgtccttggaagaa 29653603  T
Q  139 gctcctcgccactggagcccaagcaacttggtttataa 176  Q
    | || | |||||||||| |||| |||||||||| ||||    
T  29653602 gttcattgccactggag-ccaaacaacttggttaataa 29653566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 3811718 - 3811854
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaa 134  Q
    ||||||||| || ||||| || ||||||||||||||| || || |||||  |||||||  |||||||| ||||||| |||||| ||  |||||||||| |    
T  3811718 ggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaacccgatattcctcgagtacgtccttgga 3811817  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| |||| |||| || || |||| ||||||||||    
T  3811818 aggagttccttgccattgaagaccaaacaacttggtt 3811854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 3848947 - 3849074
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagc 140  Q
    |||||| ||||  |||||||||||| ||||| | |||||||| | ||||| | ||||  ||| ||||||||||||| || ||||||||||||||| || |    
T  3848947 cgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaacccggtattctccagatacgtccttgaaatgaac 3849046  T
Q  141 tcctcgccactggagcccaagcaacttg 168  Q
    ||||   ||||||||| |||||||||||    
T  3849047 tccttatcactggagctcaagcaacttg 3849074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 178
Target Start/End: Original strand, 20963218 - 20963279
Alignment:
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttataaga 178  Q
    |||||||||||| ||| |||||| |||| ||||||||||||||| |||||| ||||||||||    
T  20963218 cccggatacgtcattggaaggaggtccttgccactggagcccaaacaactttgtttataaga 20963279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 28616371 - 28616540
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||  ||||||||  | |||||||||| || || |||||||||||||||||| ||||| |||||  || |||| ||||      
T  28616371 ttttttgctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaa 28616470  T
Q  101 aattgaacccggtattcc-cggatacgtccttgaaaggagctcc-tcgccactggagcccaagcaacttg 168  Q
    ||| ||||||| |||||| |||||| ||||||| |||||| ||| | | |||||||| |||| |||||||    
T  28616471 aatcgaacccgatattccgcggatatgtccttggaaggagttcctttgtcactggagtccaaacaacttg 28616540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 144
Target Start/End: Original strand, 15234109 - 15234197
Alignment:
Q  57 gtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcct 144  Q
    |||||||||||||||| |||||| ||||  ||||||| |||| |||| |||||  ||||| ||||| |||||||||| |||||||||||    
T  15234109 gtgcgtagaggcatgcgcactggtcaagtgttgttccccctgagaatcgaacctagtattccccgggtacgtccttggaaggagctcct 15234197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 28525447 - 28525530
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaag 84  Q
    |||||||| |||||||  |||||| ||||| ||  |||||  ||||| ||||| |||||||||||||||||| |||||||||||    
T  28525447 tttttggctttcacaccagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaag 28525530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 31596497 - 31596592
Alignment:
Q  74 cactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    |||||||||| ||||||||| ||||  ||| ||||| | |||||  |||||||||| ||| ||||||||||| |||||||||  ||||||||||||    
T  31596497 cactggccaaacattgttccccctgaaaatagaacctgatattctacggatacgtctttggaaggagctccttgccactggaatccaagcaacttg 31596592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 44193571 - 44193422
Alignment:
Q  26 acccactattggtgggcgactagtccggttcgtgcgtagagg---catgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cgg 121  Q
    |||||| | ||||||||||||| ||| | ||||  |||||||   ||| ||||| || ||||| ||||||| |||   ||| ||||| |||||||| |||    
T  44193571 acccaccaatggtgggcgactaatccagctcgtatgtagaggagacattcacacgggtcaagcgttgttccccctaaaaatcgaacctggtattcctcgg 44193472  T
Q  122 atacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||| ||| || |||||| | |||||||||| |||||||||||||||    
T  44193471 atacgtcattggaaagagctcattgccactggagtccaagcaacttggtt 44193422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 4080323 - 4080477
Alignment:
Q  15 actggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta 114  Q
    |||||||| | |||||| ||||||| || |||| || | ||||||||| |||||||||  ||||| ||||| |||||  |  |  |||| ||| || |||    
T  4080323 actggttttcgacccaccattggtgagcaactaatctgattcgtgcgtggaggcatgcgtactggtcaagcgttgttttttataagaatcgaatccagta 4080422  T
Q  115 tt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    || |||||||||||| ||| |||||||| |||| |||||||| |||| |||||||    
T  4080423 tttcccggatacgtcattggaaggagcttctcgtcactggagtccaaacaacttg 4080477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 40968964 - 40969078
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggata-cgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||| | ||||| |||| | |||||   ||||| ||| ||||||||||||||| || | |||||||| || || ||| | |||||| ||||    
T  40968964 tgcgtagaggcattcgcactgaccaaacgttgttttccctggaaatcgaacccggtattccctgagaacgtccttggaatgaactcattgccactagagc 40969063  T
Q  157 ccaagcaacttggtt 171  Q
    |||||||||||||||    
T  40969064 ccaagcaacttggtt 40969078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 117 - 171
Target Start/End: Complemental strand, 44773262 - 44773208
Alignment:
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||| ||||||||||||||||||| ||| |||||| ||| |||||||||||||||    
T  44773262 cccgaatacgtccttgaaaggagcgccttgccactagagtccaagcaacttggtt 44773208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 160
Target Start/End: Complemental strand, 34722759 - 34722635
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    |||||||||||| ||||| |||||||||||| ||||  ||||| |||||| ||||||  |||| |||| ||||||  |||||    | |||||||||| |    
T  34722759 ggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcgaaccc-atattcatttggtacgtccttgga 34722661  T
Q  135 aggagctcctcgccactggagcccaa 160  Q
    |||||||||| | |||||||||||||    
T  34722660 aggagctccttgtcactggagcccaa 34722635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 34346279 - 34346423
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| |  |||| |||| || || |  || |||||||||||||||||||||||||||  ||||||| ||||      
T  34346279 tttttggctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgttccccctgat 34346378  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcct 144  Q
    |||  ||||| ||||| ||| | |||||||||| || ||||||||    
T  34346379 aatcaaacccagtattccccaggtacgtccttggaatgagctcct 34346423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 173
Target Start/End: Complemental strand, 41187766 - 41187650
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    |||||||||||||| ||||||| ||||  ||||||| |||   ||| |||||||||||||  | |||||||||||  ||||||||||| || ||| | ||    
T  41187766 tgcgtagaggcatggacactggtcaagtgttgttccccctcataatcgaacccggtattcttcagatacgtccttagaaggagctccttgctacttgcgc 41187667  T
Q  157 ccaagcaacttggttta 173  Q
     ||||||||||| ||||    
T  41187666 gcaagcaacttgattta 41187650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 144
Target Start/End: Complemental strand, 10219531 - 10219441
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaaggagctcct 144  Q
    |||||||||||||||||   | |||| |||| |||||| || | ||||| ||| || ||| ||||| ||||||||||||||||||||||||    
T  10219531 tcgtgcgtagaggcatgtgtattggctaagcgttgttcttcttaggaatcgaatcccgtaattcccagatacgtccttgaaaggagctcct 10219441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 44548781 - 44548899
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||| | ||||||  ||||||||||| | | | |||||||||  | ||||||| || |||||||||| || ||||| ||  ||| || ||     
T  44548781 tgcgtagaggcatacgcactggttaagcattgttcttaccgagaattgaacttgatattccccgaatacgtccttggaatgagcttcttaccattgaagt 44548880  T
Q  157 ccaagcaacttggtttata 175  Q
    |||||||||||||||||||    
T  44548881 ccaagcaacttggtttata 44548899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 2784989 - 2784905
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctc 142  Q
    ||||||||||||||| ||||| ||||   ||||| | ||||  ||| |||| ||||||||| ||||||||||||||||||||||||    
T  2784989 tgcgtagaggcatgcgcactgaccaaatcttgtttc-cctgaaaatcgaactcggtattcctcggatacgtccttgaaaggagctc 2784905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 173
Target Start/End: Original strand, 16813198 - 16813329
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagc 140  Q
    |||||| ||||| |||||| |||||||||||  ||||| ||| | ||||||| ||||  | ||||||  ||||||| | || |||||||||| |||||||    
T  16813198 cgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcc-cctgaaagttgaacttggtattctccgagtacgtccttggaaggagc 16813296  T
Q  141 tcctcgccactggagcccaagcaacttggttta 173  Q
    |||| | || ||||||| || ||||| ||||||    
T  16813297 tccttgtcagtggagcctaaacaactaggttta 16813329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 173
Target Start/End: Original strand, 16852477 - 16852608
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagc 140  Q
    |||||| ||||| |||||| |||||||||||  ||||| ||| | ||||||| ||||  | ||||||  ||||||| | || |||||||||| |||||||    
T  16852477 cgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcc-cctgaaagttgaacttggtattctccgagtacgtccttggaaggagc 16852575  T
Q  141 tcctcgccactggagcccaagcaacttggttta 173  Q
    |||| | || ||||||| || ||||| ||||||    
T  16852576 tccttgtcagtggagcctaaacaactaggttta 16852608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 97
Target Start/End: Original strand, 20116604 - 20116700
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcct 97  Q
    |||||||| ||| ||| ||||||| |||||  |  ||||| || ||| ||||| || ||||||||||||||| || |||||| || |||||||||||    
T  20116604 tttttggctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatgcgttgttcctcct 20116700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 5e-46; HSPs: 58)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 22993359 - 22993532
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||  |||||| |  |||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  22993359 tttttggctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcgg 22993458  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| ||||||| |||| ||||| |||||||||| ||||||||||| |||||||||| |||||||||||||||||    
T  22993459 aatcgaacccgatattccccgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggttta 22993532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 48804800 - 48804629
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| | |||||| |||||| ||||| || ||||||||||||||| |||||||||||  ||||||| | ||||    
T  48804800 ttttttgctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttggg 48804701  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  48804700 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 48804629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 13095975 - 13095793
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||  ||| ||||||| |||||| |  |||| ||||||| ||||| || ||||||||||||||| |||||||||||  ||||||| ||||||    
T  13095975 tttttggcttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggg 13095876  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttataagatatt 182  Q
    ||| |||||||||||| ||||| |||||||||||||||||||||| ||||| |||||||||||||||||||||| | ||||||    
T  13095875 aatagaacccggtattccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaacttggtttagacgatatt 13095793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 1797536 - 1797409
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagc 140  Q
    |||||||||||| |||||||||||| ||||| |||||||||||| ||||| | ||||||||| |||||||||||||| |||||||||||||| |||||||    
T  1797536 cgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggtattcctcggatacgtccttggaaggagc 1797437  T
Q  141 tcctcgccactggagcccaagcaacttg 168  Q
    |||| |||||||||||||||||||||||    
T  1797436 tccttgccactggagcccaagcaacttg 1797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 10047868 - 10048039
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| | |||||| |||||| | | | || ||||||||||| ||| |||||||||||  ||||||| ||||||    
T  10047868 tttttggctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctggg 10047967  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||  ||||||||||||||    
T  10047968 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagttcaagcaacttggtt 10048039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 4195211 - 4195365
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    |||||||||||||| | |||||| || ||| ||||| || ||||||||||||||| |||| |||||   ||||||||||||| ||| |||| ||||||||    
T  4195211 ggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattc 4195310  T
Q  118 cc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || |||||||||||||  |||||||||| ||||||||||||||||||||||||||    
T  4195311 cccggatacgtccttggcaggagctccttgccactggagcccaagcaacttggtt 4195365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 5069807 - 5069975
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||  ||||||| |||||| |  |||||||||||| ||||| | ||||||||||||||||||||| || |||| |||||||||||||     
T  5069807 tttttggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctgga 5069906  T
Q  101 aattgaacccggta-ttcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    ||| |||||||||| ||||||| |||||||||  ||| ||||||| ||||||||||||||| |||||||    
T  5069907 aatcgaacccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaacttg 5069975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18785786 - 18785615
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| |  ||||  |||||| ||| |||| ||||||||||||||| |||||||||||  ||||||| ||| ||    
T  18785786 tttttggccttcgcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctagg 18785687  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||||| |||||||||| |||||||| || |||||||||||||| |||||||||||    
T  18785686 aatcgaacccggtattccccgggtacgtccttggaaggagcttcttgccactggagcccatgcaacttggtt 18785615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 22974049 - 22973911
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaa 134  Q
    ||||| |||||| || || || |||||||| ||||||||||||||||||| ||||||| |||| |||| ||||||||||||||| || |||||||||| |    
T  22974049 ggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaacccggtattccccgagtacgtccttgga 22973950  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||||||||||||| | |||||||| ||||||||||||    
T  22973949 aggagctcctcgccattagagcccaaacaacttggttta 22973911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 43925572 - 43925458
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||| ||||| |||||  ||||||| ||||||||| ||||||||||||||| || |||||||||| ||||||||||| |||||||||||    
T  43925572 tgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagc 43925473  T
Q  157 ccaagcaacttggtt 171  Q
    |||||||||||||||    
T  43925472 ccaagcaacttggtt 43925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 55 - 171
Target Start/End: Complemental strand, 47341939 - 47341822
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||||||||| |||||||||||  ||||||| ||||||||| |||| ||||||| ||||| |||||||||| || |||||||| ||||||||    
T  47341939 tcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagctccttgccactgg 47341840  T
Q  154 agcccaagcaacttggtt 171  Q
    ||||||||||||||||||    
T  47341839 agcccaagcaacttggtt 47341822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 17748409 - 17748545
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| |||| ||||||||||||| |||||||||||| ||||||| ||||||||| |||||||||||| |||| ||||||||||| |    
T  17748409 ggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgaatacgtccttgga 17748508  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || |||| || |||||| |||||||| ||||||||||    
T  17748509 agaagctgcttgccactagagcccaaacaacttggtt 17748545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 35 - 169
Target Start/End: Complemental strand, 34659309 - 34659174
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttga 133  Q
    ||||||||||||| ||||| |||||||||||||||||| |||||| ||||| ||||||| | || |||| |||||||||||| ||||| ||| ||| ||     
T  34659309 tggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaacccggtattccccgggtacatccctgg 34659210  T
Q  134 aaggagctcctcgccactggagcccaagcaacttgg 169  Q
    ||||||||||| ||||||||||||||| ||||||||    
T  34659209 aaggagctccttgccactggagcccaaacaacttgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 26 - 171
Target Start/End: Complemental strand, 16802215 - 16802069
Alignment:
Q  26 acccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggata 124  Q
    |||||| | ||||| ||||||| ||||| |||||||||||||||| | |||||||||| | |||||||||||  |||| ||| |||||||| ||||| ||    
T  16802215 acccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggtattccccgggta 16802116  T
Q  125 cgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||| ||||||||| | |||||||||||||| |||||||||||    
T  16802115 cgtccttggaaggagctcattgccactggagcccaggcaacttggtt 16802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 14650434 - 14650263
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||| |||||||| |  |||| |||||||  |||| || |||||||||||||   |||||| |||||||||||||||||||     
T  14650434 tttttggctttcgcaccggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctgga 14650335  T
Q  101 aattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||| ||||| |||| |||||||||| ||||||||||| |||||| ||| |||| ||||||||||    
T  14650334 aatcgaacccgatattctccgggtacgtccttggaaggagctccttgccactagagtccaaacaacttggtt 14650263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 43346784 - 43346942
Alignment:
Q  14 cactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggt 113  Q
    ||||||||||| |||||| |  | || ||||||| ||||| |||| ||||||||||||| ||| |||||||  ||||||| | || ||||||||||||||    
T  43346784 cactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaacccggt 43346883  T
Q  114 att-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||| |||||||| ||| ||||||||||| |||||||||| |||| ||||||||||    
T  43346884 attccccagatacgtctttggaaggagctccttgccactggagtccaaacaacttggtt 43346942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 36619246 - 36619419
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || |||||||||||||   |||||| | |||||| |||||| ||||| || |||||||||||||||||||||| ||||  ||||||| ||||||    
T  36619246 ttttttgctttcacactggtttttgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctggg 36619345  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||||||| |||  ||||||||||| |||||| |||| |||||| ||| ||||  |||||| ||||    
T  36619346 aatcgaacccggtattccccaaatacgtccttgcaaggagttccttgccactagagtccaaataacttgattta 36619419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 42210254 - 42210425
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||  ||||||| |||||| |  |||||| || || ||||| |||||||||||||||||| |||||||||| | |||||    |||||    
T  42210254 tttttggctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactggg 42210353  T
Q  101 aattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||| |||||||||| |||||||||||||| || |||||||| |||||||||| | |||||||||||||    
T  42210354 aatcgaagccggtattcctcggatacgtccttggaaagagctccttgccactggagtctaagcaacttggtt 42210425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 19914730 - 19914867
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaa 134  Q
    ||||||||| || || || || ||||||||||||||| || ||||||||| ||||||||  ||||||| |||||| |||||||   | |||||||||| |    
T  19914730 ggtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaagcgttgttcctt-tgggaatcgaacccagtattccttaggtacgtccttgga 19914828  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  19914829 aggagctccttgccactggagcccaagcaacttggttta 19914867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 42 - 167
Target Start/End: Complemental strand, 23658255 - 23658130
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagc 140  Q
    |||||| ||||| ||||| ||||||||||||||||||||||||| ||||||| ||||| ||| ||||  | ||||||| || |||||||||| |||||||    
T  23658255 cgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaactggatattccctgggtacgtccttg-aaggagc 23658157  T
Q  141 tcctcgccactggagcccaagcaactt 167  Q
    |||| ||||||||||||||| ||||||    
T  23658156 tccttgccactggagcccaaacaactt 23658130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 43 - 172
Target Start/End: Original strand, 43862006 - 43862136
Alignment:
Q  43 gactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagct 141  Q
    ||||| ||||| || ||||||||||||||| |||||||||| | ||||||| ||||||||| |||||||||||| ||| |||||||| ||| || |||||    
T  43862006 gactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaacccggtattccccagatacgtctttggaaagagct 43862105  T
Q  142 cctcgccactggagcccaagcaacttggttt 172  Q
    ||| ||| || |||||||| |||||||||||    
T  43862106 ccttgccgctagagcccaaacaacttggttt 43862136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 21530865 - 21530692
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| |||  || ||||||| |||||| |  |||| |||| || | ||| |||||||||||||||||  ||||| |||||  ||||||| ||||||    
T  21530865 tttttggctttcgaaccggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttccccctggg 21530766  T
Q  101 aattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||  ||||| ||||||||  | |||||||||| ||||||||||| |||||||||||| |||||||||||||||    
T  21530765 aatcaaacccagtattccccaggtacgtccttggaaggagctccttgccactggagccgaagcaacttggttta 21530692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 1606058 - 1605886
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| | |||| |  |||||||||||| ||||| ||  || ||||||||||  |||||||||||| ||||||| |||||     
T  1606058 tttttggctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctgga 1605959  T
Q  101 aattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||| ||||| ||||||| |||| |||||||||| ||||||||||| | || ||||| |||| |||||||||||    
T  1605958 aatcgaaccaggtattctccgggtacgtccttggaaggagctccttgtcattggagtccaaacaacttggttt 1605886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 172
Target Start/End: Original strand, 4228780 - 4228915
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttga 133  Q
    ||||||||||||| ||||| || ||||||| ||||||  |||||||||| | ||||||||   || ||| ||||| |||||||| ||||||||||||||     
T  4228780 tggtgggcgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgttcct---ggaaatcgaacctggtattcctcggatacgtccttgg 4228876  T
Q  134 aaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||||||||||| ||| ||||||||||| |||||||||||    
T  4228877 aaggagctccttgccgctggagcccaaacaacttggttt 4228915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 8734678 - 8734849
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| |  |||||||||||| || || |||||||| ||||||||| ||||| |||||||||||||| ||  |     
T  8734678 tttttagctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttcccccaaga 8734777  T
Q  101 aattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||| | |||||||| |||| ||||||| ||||||||||| |||||||  |||||| ||||||||||    
T  8734778 aatcgaacctgatattcccgagatatgtccttggaaggagctccttgccactgacgcccaaacaacttggtt 8734849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 38578876 - 38578991
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| |||||| |  |||||||||||| ||||| || ||||||||||||||| |||||||||||| ||||||| ||||||||| ||||||| ||||     
T  38578876 ggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattc 38578975  T
Q  117 cccggatacgtccttg 132  Q
    ||||| ||||||||||    
T  38578976 cccgggtacgtccttg 38578991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 35 - 160
Target Start/End: Complemental strand, 14535374 - 14535248
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttga 133  Q
    ||||||||||||| ||| | ||||||||||||||||||||||||||||||  ||||||  ||||  |||  ||||||||||||||||| ||||||||||     
T  14535374 tggtgggcgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttctccctgaaaatgaaacccggtattcccggagtacgtccttgg 14535275  T
Q  134 aaggagctcctcgccactggagcccaa 160  Q
    |||||| || | |||| ||||||||||    
T  14535274 aaggagttctttgccattggagcccaa 14535248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 21190772 - 21190914
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||| | |||||| |||| |||||||||| || |  |||||||||||||||||| |||| ||||||| ||| ||||||| ||    
T  21190772 ttttttgctttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctagg 21190871  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctc 142  Q
    ||| |||||||||||| |||||||| ||||||| |||||||||    
T  21190872 aatcgaacccggtattccccggataagtccttggaaggagctc 21190914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 26423320 - 26423450
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagc 140  Q
    |||||| || || ||||||||||||||| |  |||||||||||| ||||| | ||||||||| ||||||||||||||  || |||||||||| ||||||     
T  26423320 cgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaacccggtattccttgggtacgtccttggaaggagt 26423419  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    | || ||||||||||||||| ||||||||||    
T  26423420 ttcttgccactggagcccaaacaacttggtt 26423450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 39420913 - 39420784
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagc 140  Q
    |||||| ||||| || |||||||||||| || |||||||||||| |||||||   ||||| | ||||| ||||||||| || ||| ||||||||||||||    
T  39420913 cgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgttccctttgggattcgaacc-ggtattccccgggtacctccttgaaaggagc 39420815  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    |||| |||||| |||||||||||||||||||    
T  39420814 tccttgccactagagcccaagcaacttggtt 39420784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 87 - 173
Target Start/End: Original strand, 34127698 - 34127785
Alignment:
Q  87 ttgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||||||||| ||||| ||||||||||||||| || |||||||||| |||||| |||| |||| |||||||||||||||||||||||    
T  34127698 ttgttcctcctcggaatcgaacccggtattccccgggtacgtccttggaaggagttccttgccattggagcccaagcaacttggttta 34127785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 39475057 - 39474884
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||||||||| | ||||||||  ||||| |||||| ||||| || |||||||||| |||| ||||| |||||| ||||||| | | ||    
T  39475057 ttttttgctttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttccccatagg 39474958  T
Q  101 aattgaacccggtat--tcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||| |||||||||||   |||||||||||| ||| || ||||||||  ||||| ||| |||| |||||||||||    
T  39474957 aatcgaacccggtatacccccggatacgtctttggaaagagctccttaccactagagtccaaacaacttggttt 39474884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 5039445 - 5039582
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||| ||||||| ||||| || |||||||||| |||  ||||| |||||  ||||||||||| ||||| |||| ||||||| |||| |||| ||  || |    
T  5039445 ggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcggtattccccgaatacatctatgga 5039544  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttt 172  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  5039545 aggagctccttgccactggagcccaaacaacttggttt 5039582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 172
Target Start/End: Original strand, 22268088 - 22268193
Alignment:
Q  68 catgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaact 166  Q
    ||||| ||||||||||   ||||||| ||||||||| |||||||||||||||  | |||||||||| || |||||||| ||||||||||||||| |||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaact 22268187  T
Q  167 tggttt 172  Q
    ||||||    
T  22268188 tggttt 22268193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 46414738 - 46414625
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||||||||| || ||||||||| || ||| ||||| |||| ||||  |||||||| ||| ||||||||| |||||||||||| ||||| ||    
T  46414738 tcgtgcgtagaggcatgcgcattggccaagcgttattcatcctgagaatcgaacttggtattccacgggtacgtccttaaaaggagctccttgccacggg 46414639  T
Q  154 agcccaagcaactt 167  Q
    ||||||| ||||||    
T  46414638 agcccaaacaactt 46414625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 45960030 - 45960165
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaa 135  Q
    |||| ||||||| ||||| |  ||||||||||||||| ||||| |||||  ||||| | | |||||||  ||| |||||||||| |||||||||||| ||    
T  45960030 ggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcggtattccccgatacgtccttggaa 45960129  T
Q  136 ggagctcctcgccactggagcccaagcaacttggtt 171  Q
     |||||||| || |||||||| ||| ||||||||||    
T  45960130 agagctccttgctactggagctcaaacaacttggtt 45960165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 365200 - 365086
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||| |||||   |||| |||||||||||| |||| |||||||||||||| |||||||||  ||| ||||||||| |  ||||| ||||    
T  365200 tgcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaatcgaacccggtattcctcggatacgtttttggaaggagctctttaccactagagc 365101  T
Q  157 ccaagcaacttggtt 171  Q
    ||||| |||||||||    
T  365100 ccaaggaacttggtt 365086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 27875137 - 27875250
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||  |||||||||||  || |||| ||||||||| ||| |||||||| ||| ||||||| |||| |||||||| || |||||||||||    
T  27875137 tgcgtagaggcatgtgcactggccaagtgttattccccctgggaatcgaatccggtattccccagatacgt-cttggaaggagctacttgccactggagc 27875235  T
Q  157 ccaagcaacttggtt 171  Q
    |||| ||||||||||    
T  27875236 ccaaacaacttggtt 27875250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 45448070 - 45447916
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| ||||||||  |||||| ||||| || |  | ||| ||||||| |||| |||| ||||||| ||||||  ||||| ||| ||||| ||||||     
T  45448070 ggtttccgacccactaaaggtgggtgactaatctgactagtgtgtagagggatgcgcactagccaagcgttgttctccctggaaatcgaacctggtattt 45447971  T
Q  118 c-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | ||| |||||||||| ||||||||||| |||||| || ||||||||||||||||    
T  45447970 ctcgggtacgtccttggaaggagctccttgccactagaacccaagcaacttggtt 45447916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 27028379 - 27028222
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-tt 116  Q
    ||||||| |||||| |  |||| ||||||| ||| | || || |||||||||||| |||||||||||  ||||||| ||||| ||| ||||| |||| ||    
T  27028379 ggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaacctggtattt 27028280  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    ||| | ||||| |||| || |||||||| ||||| |||| |||| |||||||||||||    
T  27028279 cccaggtacgttcttggaatgagctccttgccaccggagtccaaacaacttggtttat 27028222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 49 - 168
Target Start/End: Complemental strand, 29152009 - 29151889
Alignment:
Q  49 tccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgc 147  Q
    ||||| ||||| |||||||||||| |||||| ||| | |||||| |||||||||| |||||||||||||| | | ||||||| |||||||| ||| | |     
T  29152009 tccggatcgtgtgtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaacccggtattcctcaggtacgtccatgaaaggaactcattgt 29151910  T
Q  148 cactggagcccaagcaacttg 168  Q
    |||| |||||||| |||||||    
T  29151909 cactagagcccaaacaacttg 29151889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 9685770 - 9685691
Alignment:
Q  87 ttgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaac 165  Q
    |||||||||||| |||| ||||||| ||||||| |||||||| |||| ||||||||||| ||||||||||||||| ||||    
T  9685770 ttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 9685691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Original strand, 49142696 - 49142779
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc 119  Q
    ||||||| |||| ||||| |||||||||||||||||  ||||||| |||| ||||||| ||| ||||| |||||||||||||||    
T  49142696 ggtgggcaactaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaacccggtattccc 49142779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 168
Target Start/End: Original strand, 24969377 - 24969484
Alignment:
Q  60 cgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagccc 158  Q
    |||||||||| || |||||||||||  |||||||  |||| ||| ||||||||||||  || |||||||||||||||  ||||||| |||||||||||||    
T  24969377 cgtagaggcacgcgcactggccaagtgttgttcc--ctggaaatcgaacccggtattttccagatacgtccttgaaaaaagctccttgccactggagccc 24969474  T
Q  159 aagcaacttg 168  Q
    || |||||||    
T  24969475 aaacaacttg 24969484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 3353506 - 3353371
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    ||||| |||||| ||||| |||||||||||||||||| ||||||||||   ||||| | |||| |||| || |||| |||||||  |||||||||||  |    
T  3353506 ggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtttc-cctgagaatcgatcccgatattccctagatacgtccttata 3353408  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | |||||||| ||||||| || |||||||| ||||||    
T  3353407 atgagctccttgccactgcaggccaagcaatttggtt 3353371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 10 - 172
Target Start/End: Complemental strand, 37515029 - 37514866
Alignment:
Q  10 ttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacc 109  Q
    ||||||| ||||||| |||||||| |||||  ||| || ||||| |||||||||||| ||||| ||||| |||| | |||||||  |||  ||| |||||    
T  37515029 ttcacaccggtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaacc 37514930  T
Q  110 cggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    | ||||| ||||| || ||||||| |||||||| || | || || || |||| |||||||||||    
T  37514929 cagtattccccgggtatgtccttggaaggagctacttgtcattgaagtccaaacaacttggttt 37514866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 167
Target Start/End: Complemental strand, 42032140 - 42032046
Alignment:
Q  74 cactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    |||||||||| | ||||||| | ||||||| ||||| ||||||||| || |||||||||| |||||||| || || |||||||||||| ||||||    
T  42032140 cactggccaaacgttgttccccgtgggaatcgaaccaggtattccccgggtacgtccttggaaggagcttcttgctactggagcccaaacaactt 42032046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 117 - 173
Target Start/End: Complemental strand, 11607131 - 11607075
Alignment:
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||| ||||||||||| |||||| |||| ||||||||||||||||||||||| ||||    
T  11607131 cccgaatacgtccttggaaggagttccttgccactggagcccaagcaacttgattta 11607075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 108
Target Start/End: Complemental strand, 32823320 - 32823253
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaac 108  Q
    ||||||| ||||| |||||||||||||||| ||||| |||||||  ||||||| ||||||||| ||||    
T  32823320 gcgactaatccggctcgtgcgtagaggcatacacaccggccaagtgttgttccccctgggaatcgaac 32823253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 4973143 - 4973273
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagc 140  Q
    |||||| ||||| |||| ||||||||||||| || ||| ||||  || |||| | | ||||| ||||||| |||| |||| ||| ||||||| ||| |||    
T  4973143 cgactaatccggctcgtacgtagaggcatgcgcattggtcaagtgttattccccgtaggaatcgaacccgatattccccgaataagtccttggaagaagc 4973242  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    |||| | || |||||||||| ||||||||||    
T  4973243 tccttgtcagtggagcccaaacaacttggtt 4973273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 134
Target Start/End: Original strand, 28396193 - 28396286
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaa 134  Q
    |||||| ||||| || |||||| |||||||| |||  || |||| ||||||| |||| |||||||||||| || ||||||||||||| ||||||    
T  28396193 cgactaatccggctcatgcgtaaaggcatgcgcaccagctaagcgttgttccccctgagaattgaacccgatatttcccggatacgttcttgaa 28396286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 41945555 - 41945506
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagc 85  Q
    ||||| |||||| ||||| |||||||||||||||||| ||||||||||||    
T  41945555 ggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagc 41945506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 135
Target Start/End: Original strand, 48244383 - 48244483
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||| ||||||| ||||| || ||||||||||||  | |||||  ||||||||||||| | | | |||||||||||||||| |||  |||||||||||||    
T  48244383 ggtgagcgactaatccggctcatgcgtagaggcaaacgcactgatcaagcattgttccccttagaaattgaacccggtattccccaaatacgtccttgaa 48244482  T
Q  135 a 135  Q
    |    
T  48244483 a 48244483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 29805489 - 29805603
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||| ||||| ||||| |||| | ||||||| | |  |||| |||| |||||||| ||| ||||||||||||||||| |||||  |||||||||     
T  29805489 tgcgtagagacatgcgcactgaccaaacgttgttcc-catatgaatcgaactcggtattctccgaatacgtccttgaaaggatctccttaccactggagt 29805587  T
Q  157 ccaagcaacttggttt 172  Q
    |||| |||||| ||||    
T  29805588 ccaaacaacttagttt 29805603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 44961684 - 44961802
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||| ||||||| |||||  ||||| |||||||||| || |||   ||||||| | | |||| | |||||||||||||||||||||||||| | |||||     
T  44961684 tcgtacgtagagacatgcgtactggtcaagcattgtcccccctaaaaattgaatctgatatttctcggatacgtccttgaaaggagctccttgtcactga 44961783  T
Q  154 agcccaagcaacttggttt 172  Q
    |  |||| |||||||||||    
T  44961784 aatccaaacaacttggttt 44961802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 28744279 - 28744178
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| |||  |||||| |||||| |  ||||| |||||| ||||| ||||  ||||||| ||||  ||||||||||||||||||| ||| ||    
T  28744279 tttttggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaagcattgttccccctagg 28744180  T
Q  101 aa 102  Q
    ||    
T  28744179 aa 28744178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 42 - 119
Target Start/End: Complemental strand, 30827368 - 30827291
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc 119  Q
    |||||| ||||| ||||||||||||||||||  ||||||||||  ||||||  ||||  ||| ||||| |||||||||    
T  30827368 cgactaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccctgaaaatcgaacctggtattccc 30827291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 170
Target Start/End: Original strand, 13845326 - 13845378
Alignment:
Q  118 ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggt 170  Q
    |||| |||||||||| ||||||||| | | |||||||||||||| ||||||||    
T  13845326 ccgggtacgtccttggaaggagctcattgtcactggagcccaagaaacttggt 13845378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 92; Significance: 8e-45; HSPs: 77)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 47078577 - 47078406
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||||||||||| |||||| | ||||| ||||||| ||||| |||||||||||||||||  |||||||||||| ||||||| ||||||    
T  47078577 ttttttgctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctggg 47078478  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| ||||||||| ||||||||||||||||    
T  47078477 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggaacccaagcaacttggtt 47078406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 29895906 - 29895735
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||| | ||| ||| ||||||| | |||| | |||||| |||||| ||||| || ||||||||||||||| |||||||||||  ||||||| ||||||    
T  29895906 tttttgcctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggg 29895807  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| |||||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  29895806 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 29895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 1446912 - 1446774
Alignment:
Q  34 ttggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttg 132  Q
    ||||||| |||||| ||||| || ||||||||||||||| |||||||||||  ||||||| ||||||||| |||||||||||| ||||||||||||||||    
T  1446912 ttggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttg 1446813  T
Q  133 aaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
     ||||||||||| ||||||||||||||||||||||||||    
T  1446812 gaaggagctccttgccactggagcccaagcaacttggtt 1446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 18 - 174
Target Start/End: Complemental strand, 38166129 - 38165972
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| |||||| |  |||||||||||| ||||| |||||||||||| ||||| |||||||||||| ||||||| |||||||||  ||||| |||||     
T  38166129 ggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaacccagtattc 38166030  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    |||||||||||||||| ||||||||||| |||| |||||||||| |||||||||||||    
T  38166029 cccggatacgtccttggaaggagctccttgccagtggagcccaaacaacttggtttat 38165972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 53599179 - 53599008
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| | ||||||  ||||  ||| || ||||| || ||||||||||||||| |||||||||| | ||||||||||||||    
T  53599179 tttttggctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctggg 53599080  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| |||| |||||||||| ||||||||||    
T  53599079 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccaatggagcccaaacaacttggtt 53599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 5472875 - 5473013
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||||||||||| ||||| |||||||||||||||||| |||||||||||| ||||| | |||| ||||  |||| |||||| ||||||||||||||||||    
T  5472875 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaacctggtattccccggatacgtccttgaa 5472974  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    | |||||||| ||||||||||||||| |||||| |||||    
T  5472975 atgagctccttgccactggagcccaaacaacttagttta 5473013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 3574473 - 3574610
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    |||| ||||||| ||||  |||||||||||||||||| |||||||||||  ||||||  |||||||||||||| ||||||||||  | |||||||||| |    
T  3574473 ggtgagcgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttgga 3574572  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttt 172  Q
    |||||||||| |||||||||||||||||||||||||||    
T  3574573 aggagctccttgccactggagcccaagcaacttggttt 3574610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 27248510 - 27248376
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    |||||||||||| || || || ||||||||||||||| |  ||||||||| ||||||||||||||| | ||||||||||||||| ||||||||||||| |    
T  27248510 ggtgggcgactaatctggctcctgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcgaacccggtattccccggatacgtccttgga 27248413  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||| | ||||||||||||||||||||||||||    
T  27248412 aggagctcgttgccactggagcccaagcaacttggtt 27248376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 41339421 - 41339558
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttga 133  Q
    ||||||||||||| ||||  |||||||||||||||| |||||||||||||| ||||||| | ||||| | ||||||||||||| |||| ||||||||||     
T  41339421 tggtgggcgactaatccgtctcgtgcgtagaggcatacacactggccaagcgttgttccccttgggagtcgaacccggtattctccgggtacgtccttgg 41339520  T
Q  134 aaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||||||| |||||| |||||||| ||||||||||    
T  41339521 aaggagctccttgccactagagcccaaacaacttggtt 41339558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 42722569 - 42722724
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||| | ||| ||| ||||| | ||||||||  ||||  |||||| ||||| || ||||||||||||||| |||||||||||| ||||||||||||||    
T  42722569 tttttgactttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggg 42722668  T
Q  101 aattgaacccggta-ttcccggatacgtccttgaaaggagctcctcgccactggag 155  Q
    |||||||||||||| ||||||| |||||||||| |||||||||||  |||||||||    
T  42722669 aattgaacccggtatttcccgggtacgtccttggaaggagctcctaaccactggag 42722724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 1940804 - 1940939
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||||||||||| ||||| |||||||||||||||||| |||   |||||| ||||||| ||||||||| ||||||| |||| ||||| |||||||||| |    
T  1940804 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatttcccgggtacgtccttgga 1940900  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||||||||| |||||| |||||||| ||||||||||||    
T  1940901 aggagctccttgccactagagcccaaacaacttggttta 1940939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 55921153 - 55920981
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| |  |||| |||| || ||||| || | ||||||||||||| ||||| |||||  ||||||| ||||||    
T  55921153 ttttttgctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctggg 55921054  T
Q  101 aattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||| ||||||||||||||| || | |||||||| ||||||||||| |||||||||||||||||||||||||||    
T  55921053 aatcgaacccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggttt 55920981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 33647799 - 33647669
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaaaggagc 140  Q
    |||||| || |||||||||||||||| |||  |||||| ||||| ||||||  ||||| ||| |||||||||||||||  ||||||||||||||||||||    
T  33647799 cgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaacccggtattccccagatacgtccttgaaaggagc 33647700  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    |||| |||||| |||||||||||||||||||    
T  33647699 tccttgccactagagcccaagcaacttggtt 33647669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 173
Target Start/End: Complemental strand, 2559409 - 2559253
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| |||||| |  ||||| ||| || ||||| | |||||||||||||||| |||||||||||| ||||||||||| | ||| ||| ||||||||     
T  2559409 ggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcgaatccggtattc 2559310  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| | |||||||||| ||||||||| | ||||||||||||||| ||||||||||||    
T  2559309 cccaggtacgtccttggaaggagctcgttgccactggagcccaaacaacttggttta 2559253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 24166534 - 24166398
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaa 134  Q
    |||||| ||||| || || |||||||||||||||||| |||||||||| | ||||| | | ||||||| |||||| |||||||| || |||||||||| |    
T  24166534 ggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattccccgagtacgtccttgga 24166435  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  24166434 aggagctccttgccactggagcccaatcaacttggtt 24166398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 43458697 - 43458561
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| |||| ||||||||||||| |||||||||||| || |||||||||||||| ||| || ||||| |||  ||||||||||| |    
T  43458697 ggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtccttgga 43458598  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | ||||| || ||||||||||||||||||||||||||    
T  43458597 atgagcttcttgccactggagcccaagcaacttggtt 43458561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 8889141 - 8888970
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| || |||| ||||||| |||||| |  ||||| |||||| ||||| || ||||||||| ||||| ||||| |||||  ||||||| ||| ||    
T  8889141 tttttggcttttacaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctagg 8889042  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| |||||||||||||||  ||||||||||| ||| || |||||||| ||||||||||    
T  8889041 aatcgaacccggtattccccggatacgtccttagaaggagctccttgccgctagagcccaaacaacttggtt 8888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 172
Target Start/End: Original strand, 48317280 - 48317439
Alignment:
Q  14 cactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggt 113  Q
    |||||||||||||||||  |  |||||||||||| ||||| |||||||||||||||| ||||||| |||||| ||||||||||||  ||| ||| || ||    
T  48317280 cactggtttccaacccatcaacggtgggcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccagt 48317379  T
Q  114 a-ttcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    | ||  || ||||||| ||| || |||||| | |||||||||||||||||||||||||||    
T  48317380 atttttcgaatacgtcattggaatgagctctttgccactggagcccaagcaacttggttt 48317439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 36262759 - 36262918
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| || |||||||  |||||| |  |||||||||||| ||||  |||||||||||||||||  |||||||||||| ||||||  ||||||    
T  36262759 tttttggctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgttc--cctggg 36262856  T
Q  101 aattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaag 161  Q
    ||| ||||||||||||| |||| |||||||||| |||||||| || ||||||||||| ||||    
T  36262857 aatcgaacccggtattctccgggtacgtccttggaaggagcttcttgccactggagctcaag 36262918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 52950184 - 52950030
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| |||||| |  ||||| |||||| || ||||| || |||||| ||||| |||||||||||| ||||||| ||||||||| ||||||| ||||     
T  52950184 ggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaacccgatattc 52950085  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| | |||||||||| ||||||||||| |||||| |||||||| ||||||||||    
T  52950084 cccaggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 52950030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 6779295 - 6779159
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| || ||| ||||||||||| ||||||||| |  ||||||| ||||||||| ||||||||||||| || | |||||||||| |    
T  6779295 ggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggtattctccaggtacgtccttgga 6779196  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || ||||||| ||||||||||||||| ||||||||||    
T  6779195 agaagctccttgccactggagcccaaacaacttggtt 6779159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 41162909 - 41163045
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||||||||||| | ||| || ||| |||| ||||| ||||||||||||  |||||||  |||| ||| |||| ||||||| |||||||||||||||| |    
T  41162909 ggtgggcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcccggatacgtccttgga 41163008  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| | ||||||||||||||||||||||||    
T  41163009 aggagctccttgtcactggagcccaagcaacttggtt 41163045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 14124118 - 14123963
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    |||||||||||||| | ||||| ||||||| ||||| ||||| |||||||||||| ||||||||||   ||||||| ||||||||| ||||| |||||||    
T  14124118 ggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaacctggtattc 14124019  T
Q  118 c-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    | |   ||||| |||| |||||||| || |||| |||||||||| |||||||||||    
T  14124018 ctcaagtacgttcttggaaggagcttcttgccattggagcccaaacaacttggttt 14123963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 20128428 - 20128273
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||  |||||| | |||||| |||||| ||  | ||||||||| |||||||| |||||||||||||||||||| |||| |    
T  20128428 tttttggctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgag 20128329  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggag 155  Q
    ||| |||||| ||||| |||||||||||||||| ||||| ||||| ||| ||||||    
T  20128328 aatcgaacccagtattccccggatacgtccttggaaggaactccttgccgctggag 20128273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 68 - 174
Target Start/End: Original strand, 27531717 - 27531823
Alignment:
Q  68 catgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaact 166  Q
    ||||| || ||||||||||||||||| | ||||||| ||||||||||||||| || |||||||||| ||||||||||| |||||||||| ||||||||||    
T  27531717 catgcgcattggccaagcattgttcc-catgggaatcgaacccggtattccctgggtacgtccttggaaggagctccttgccactggagtccaagcaact 27531815  T
Q  167 tggtttat 174  Q
    ||||||||    
T  27531816 tggtttat 27531823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 38075495 - 38075381
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||| |||||||||||| ||||| | |||| |||| ||||||||||||| ||| ||||||||||| ||||| ||||| ||| |||||||    
T  38075495 tgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggtattctccgaatacgtccttggaaggaactccttgccgctggagc 38075396  T
Q  157 ccaagcaacttggtt 171  Q
    |||| ||||||||||    
T  38075395 ccaaacaacttggtt 38075381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 19 - 171
Target Start/End: Complemental strand, 4736698 - 4736545
Alignment:
Q  19 gtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc 118  Q
    |||||| |||||| |  |||||||||||| | ||| | || |||||||||||||||| ||||||| | ||||| |  ||| |||||||||||||||||||    
T  4736698 gtttccgacccaccaacggtgggcgactaattcggcttgtacgtagaggcatgcacattggccaaacgttgtttccactgagaattgaacccggtattcc 4736599  T
Q  119 -cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
     ||| ||| |||||||||||||||| | ||||||||||| ||| ||||||||||    
T  4736598 tcgggtacatccttgaaaggagctcattgccactggagctcaaacaacttggtt 4736545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 44 - 168
Target Start/End: Complemental strand, 29588812 - 29588687
Alignment:
Q  44 actagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaaggagctc 142  Q
    |||| ||||| |||||||||||||||||| |||| ||||||| ||||| | ||||||||| |||||||||| |||||||  ||||| ||| || ||||||    
T  29588812 actaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggtatttcccgggcacgtctttggaatgagctc 29588713  T
Q  143 ctcgccactggagcccaagcaacttg 168  Q
    || ||||||||||||||| |||||||    
T  29588712 cttgccactggagcccaatcaacttg 29588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 38168375 - 38168227
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||||||||||||  ||||  |||||| ||||| || ||||||||||||||  |||||||||||| ||||||||| | ||    
T  38168375 tttttggctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatg-gcactggccaagcgttgttcctcttagg 38168277  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgcca 149  Q
    ||| ||||| |||||| ||||| |||||||||| ||||||||||| ||||    
T  38168276 aatcgaacctggtattccccgggtacgtccttggaaggagctccttgcca 38168227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 295542 - 295697
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    |||||| ||||||| |  ||||| |||||| || ||||||||||||||||||||| |||||||||| | |||||||| |||||||| ||| | ||||||     
T  295542 ggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgttcct-ctgggaatcgaatctggtattc 295640  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||||||||||||||  |||| | |||| ||||||||||||||| ||| ||| ||||    
T  295641 cccggatacgtccttagaaggtgttccttgccactggagcccaaacaatttgattta 295697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 42 - 173
Target Start/End: Complemental strand, 7742003 - 7741871
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagc 140  Q
    |||||| || || |||||||||||||||||  |||||||||||| ||||| | |||| || | ||||||| |||||| || |||||| ||||||||||||    
T  7742003 cgactaatctggatcgtgcgtagaggcatgtgcactggccaagcgttgttacccctgagattggaacccgatattcctcgaatacgtacttgaaaggagc 7741904  T
Q  141 tcctcgccactggagcccaagcaacttggttta 173  Q
    |||| |||||| ||||||||||||| |||||||    
T  7741903 tccttgccactagagcccaagcaacgtggttta 7741871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 20532436 - 20532572
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    |||||||||||  ||||| || ||||||||||||||| |||||||||||| ||||||||||||| ||| |||| |||||||| |||| || | ||||| |    
T  20532436 ggtgggcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattctccgggtatggccttgga 20532535  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | |||| ||| |||||||||| |||||||| ||||||    
T  20532536 atgagcaccttgccactggagtccaagcaatttggtt 20532572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 49260692 - 49260828
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| |||||||||||||||||| |||||||||||| ||||||| | |||||||||||  | ||||| ||||||||| |||||| |    
T  49260692 ggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccttgggaattgaattcagtattccccggatacatccttgga 49260791  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| |||| |||| || |  |||||||||||||||    
T  49260792 aggagttccttgccattgaaatccaagcaacttggtt 49260828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 132
Target Start/End: Original strand, 3159478 - 3159593
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| | ||||| ||||||| || || |||||||||||||||||| |||||||||||| ||||||| ||||| | | |||||||||||||    
T  3159478 ggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaacccggtattc 3159577  T
Q  118 -ccggatacgtccttg 132  Q
     |||||||||||||||    
T  3159578 tccggatacgtccttg 3159593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 42 - 172
Target Start/End: Complemental strand, 13073616 - 13073485
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagc 140  Q
    |||||| || ||||| |||||||||| |||| |||||||||| ||||||||| | ||||||| |||| |||||||| || | |||||||||| |||||||    
T  13073616 cgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaactcggtattctccaggtacgtccttggaaggagc 13073517  T
Q  141 tcctcgccactggagcccaagcaacttggttt 172  Q
    || | |||||| |||||||| |||||||||||    
T  13073516 tcattgccactagagcccaaacaacttggttt 13073485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 42 - 168
Target Start/End: Original strand, 6032676 - 6032800
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagc 140  Q
    |||||| ||||| || | ||||||||||||  |||||| |||||   || |||||||  ||||||||||||||||||| || |||||||||| |||||||    
T  6032676 cgactaatccggctcattcgtagaggcatgagcactggtcaagc---gtacctcctgaaaattgaacccggtattccccgggtacgtccttggaaggagc 6032772  T
Q  141 tcctcgccactggagcccaagcaacttg 168  Q
    |||| |||||||||||||||||||||||    
T  6032773 tccttgccactggagcccaagcaacttg 6032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 40780870 - 40781021
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-tt 116  Q
    ||||||| |||||| |  ||||| |||||| ||||| || ||||||||||||||| ||||| |||||| ||||||| | || |||| ||||||| || ||    
T  40780870 ggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaacccgatattt 40780969  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
     ||| |||||||||| |||| ||||||| ||||||||||||||  |||||||    
T  40780970 tccgaatacgtccttaaaagaagctccttgccactggagcccagacaacttg 40781021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 7000599 - 7000472
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggag 139  Q
    ||||||| || || ||||||||||||    ||||| ||||||||| |||||| |||||||||| |||| |||||||||| || |||||||||| ||||||    
T  7000599 gcgactaatctggctcgtgcgtagag----gcacattggccaagcgttgttcttcctgggaatcgaactcggtattccccgagtacgtccttggaaggag 7000504  T
Q  140 ctcctcgccactggagcccaagcaacttggtt 171  Q
    || || ||||||| ||||||| ||||||||||    
T  7000503 cttcttgccactgtagcccaaacaacttggtt 7000472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 166
Target Start/End: Complemental strand, 20421892 - 20421727
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| |||  |||||||||| |||||  | || ||| ||| || || || || ||||||||||||||| |||||||||||  ||||||| |||||     
T  20421892 tttttggctttcgaactggtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgga 20421793  T
Q  101 aattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgccactggagcccaagcaact 166  Q
    ||| ||||| | |||||||  |||||||| ||||||||||||||| ||||||| |||||||||||||    
T  20421792 aatcgaaccag-tattccccagatacgtctttgaaaggagctccttgccactgaagcccaagcaact 20421727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 18 - 138
Target Start/End: Original strand, 7246655 - 7246776
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| |||||| |  |||||||||||| ||||| || ||||||||||||||| |||||||||||| |||||||  || ||||| |||||| |||||     
T  7246655 ggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaacccagtattc 7246754  T
Q  117 cccggatacgtccttgaaagga 138  Q
    ||||| |||||||||| |||||    
T  7246755 cccgggtacgtccttggaagga 7246776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 33 - 173
Target Start/End: Complemental strand, 33109411 - 33109268
Alignment:
Q  33 attggtgggcgactagtccggttcgtgcgtagaggcatgcacactggcca--agcattgttcctcctgggaattgaacccggtat-tcccggatacgtcc 129  Q
    |||| ||||| |||| ||||| |||||||||||| |||||  ||||||||  ||| |||||| || ||||||||||||||| |||  ||||||||| |||    
T  33109411 attgatgggcaactaatccggctcgtgcgtagagacatgcgtactggccaagagcgttgttcttcatgggaattgaacccgatatcccccggatacctcc 33109312  T
Q  130 ttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||| ||||||||| |||||||| ||| ||| ||||    
T  33109311 ttggaaggagcttctcgccactagagcccaaacaatttgattta 33109268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 39 - 157
Target Start/End: Original strand, 15839965 - 15840083
Alignment:
Q  39 gggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaagg 137  Q
    ||||||||| ||||| || ||||||||||||||| |||||||||| | || || || || ||||| |||||||||||||||  | |||||||||| ||||    
T  15839965 gggcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttatt-cttctaggaatcgaacccggtattccccaagtacgtccttggaagg 15840063  T
Q  138 agctcctcgccactggagcc 157  Q
    ||||||| ||||||||||||    
T  15840064 agctccttgccactggagcc 15840083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 38 - 171
Target Start/End: Original strand, 12703574 - 12703708
Alignment:
Q  38 tgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaag 136  Q
    |||||||||| ||||| |  ||||||||| ||| |||||||| ||||| |||||||  |||| ||| |||| | |||||||  || |||||||||  |||    
T  12703574 tgggcgactaatccggcttatgcgtagagacatacacactggtcaagcgttgttcccactggaaatcgaactcagtattcctcgagtacgtcctttgaag 12703673  T
Q  137 gagctcctcgccactggagcccaagcaacttggtt 171  Q
    || ||||| ||||||||||||||||||||||||||    
T  12703674 gatctccttgccactggagcccaagcaacttggtt 12703708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 26 - 167
Target Start/End: Original strand, 42722396 - 42722537
Alignment:
Q  26 acccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggata 124  Q
    |||||| |||||||| |||||| ||||  || ||| |||||| |||| |||||| ||||  ||||||| |||||||||  |||||||||||||| || ||    
T  42722396 acccaccattggtggacgactaatccgactcatgcatagaggtatgcgcactggtcaagtgttgttcc-cctgggaatcaaacccggtattccccgggta 42722494  T
Q  125 cgtccttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    | || |||||||||||||||| ||||||||| |||| ||||||    
T  42722495 catctttgaaaggagctcctctccactggagtccaaacaactt 42722537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 172
Target Start/End: Original strand, 15732495 - 15732612
Alignment:
Q  56 cgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactgga 154  Q
    ||||||||||||||||  |||||||||||  ||||||| | |  |||| ||||||||||||| ||||||||||||||| ||| |  | || |||||||||    
T  15732495 cgtgcgtagaggcatgtgcactggccaagtgttgttccccatatgaatcgaacccggtattctccggatacgtccttggaagaattttcttgccactgga 15732594  T
Q  155 gcccaagcaacttggttt 172  Q
    |||||| |||||||||||    
T  15732595 gcccaaacaacttggttt 15732612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 43468441 - 43468348
Alignment:
Q  26 acccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc 119  Q
    |||||| | ||||||||||||| ||||| || |||||||||  |||  |||||||||||| ||||||| ||||||||| |||||||||||||||    
T  43468441 acccaccactggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaacccggtattccc 43468348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 38 - 138
Target Start/End: Original strand, 48015102 - 48015203
Alignment:
Q  38 tgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaag 136  Q
    ||||| |||| ||||| |||||||||||||| ||| |||||||||||| |||||||  |||||||| |||||||||||||| ||| |||||| ||| |||    
T  48015102 tgggctactaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaacccggtattcctcgggtacgtctttggaag 48015201  T
Q  137 ga 138  Q
    ||    
T  48015202 ga 48015203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 155
Target Start/End: Original strand, 36145242 - 36145362
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| || || |||||||||||| |||||  ||||| ||||| | ||||||||| |||||||||||| ||||| |||||||||| |    
T  36145242 ggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaacccggtattccccgggtacgtccttgga 36145341  T
Q  135 aggagctcctcgccactggag 155  Q
    | |||||||| ||||| ||||    
T  36145342 atgagctccttgccaccggag 36145362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 87 - 165
Target Start/End: Complemental strand, 13552147 - 13552068
Alignment:
Q  87 ttgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaac 165  Q
    |||||||||||| |||| ||||||| ||||||| |||||||| |||| ||||||||||| ||||||||||||||| ||||    
T  13552147 ttgttcctcctgagaatcgaacccgatattccccggatacgtgcttggaaggagctccttgccactggagcccaaacaac 13552068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 152
Target Start/End: Complemental strand, 30317335 - 30317200
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| |  |||||||||||| | ||| |||||||||||||||| |  ||||||||||| |||||||  ||| |||| ||||| | |||||    
T  30317335 ggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaacctgatattc 30317236  T
Q  118 ccgga-tacgtccttgaaaggagctcctcgccactg 152  Q
    || || ||||||||| |||||| ||||| |||||||    
T  30317235 cccgagtacgtccttaaaaggaactccttgccactg 30317200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 16645237 - 16645119
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| |  |||||||||||| || |  || || ||||||||||||||||||||||||| |||||| |||||      
T  16645237 ttttttgctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaa 16645138  T
Q  101 aattgaacccggtattccc 119  Q
    ||| |||||||||||||||    
T  16645137 aatcgaacccggtattccc 16645119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 171
Target Start/End: Complemental strand, 13436858 - 13436762
Alignment:
Q  74 cactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| |||||| |||||||  |||||||| ||||||||||||||| | ||||||||||||||||||||||  ||||   ||||||| ||||||||||    
T  13436858 cactgaccaagcgttgttccctctgggaatcgaacccggtattccccg-tacgtccttgaaaggagctccttaccacgaaagcccaaccaacttggtt 13436762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 172
Target Start/End: Complemental strand, 14567318 - 14567198
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagc 140  Q
    ||||||| ||||| |||||||||||||||||| |||||||||| ||| ||| |  |||||||||            ||||| |||||||||| || ||||    
T  14567318 gcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacatggtttccactgggaattc-----------cccgggtacgtccttggaatgagc 14567230  T
Q  141 tcctcgccactggagcccaagcaacttggttt 172  Q
    |||| |||||||||||||||||||||||||||    
T  14567229 tccttgccactggagcccaagcaacttggttt 14567198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 58 - 166
Target Start/End: Original strand, 40272380 - 40272489
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||| |||||||||||| ||||||| | ||| ||| ||||||| |||| ||||||||| || ||| || ||||||||  |||| |||||    
T  40272380 tgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattccccggatacatcattggaaagagctccttaccaccggagc 40272479  T
Q  157 ccaagcaact 166  Q
    |||| |||||    
T  40272480 ccaaacaact 40272489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 167
Target Start/End: Complemental strand, 3507354 - 3507223
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| ||||| ||||||||| || |||| ||||||| ||||||| | ||||||| ||||||| ||||| |||||||| | ||||||    
T  3507354 ggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgttcc-cttgggaatcgaacccgatattctccggatacattcttgaa 3507256  T
Q  135 aggagctcctcgccactggagcccaagcaactt 167  Q
    ||||||| ||    ||| |||||||||||||||    
T  3507255 aggagcttcttatgactagagcccaagcaactt 3507223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 55 - 118
Target Start/End: Complemental strand, 10541081 - 10541018
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc 118  Q
    ||||||||||||||||||||||||||||||| ||||| | ||||| ||| ||||||| ||||||    
T  10541081 tcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaacccgatattcc 10541018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 105 - 171
Target Start/End: Original strand, 34667698 - 34667765
Alignment:
Q  105 gaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||||||||||| || |||||||||| ||||||||||| |||||| |||||||| ||||||||||    
T  34667698 gaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 34667765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 50486045 - 50485991
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgc 72  Q
    ||||||| |||||||| ||||||||||||| ||||| ||||||||||||||||||    
T  50486045 ggtttccgacccactaatggtgggcgactaatccggctcgtgcgtagaggcatgc 50485991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 118 - 171
Target Start/End: Complemental strand, 15829700 - 15829647
Alignment:
Q  118 ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||||||||||||||| ||||||| | ||||||||||||| ||||||||||    
T  15829700 ccggatacgtccttgaaagaagctccttgtcactggagcccaaacaacttggtt 15829647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 43 - 167
Target Start/End: Complemental strand, 37382622 - 37382497
Alignment:
Q  43 gactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagct 141  Q
    ||||| |||||||||||| ||||||||||  || ||||||| | ||||||  ||||  ||||||||| ||||||| | ||||||| | ||  ||||||||    
T  37382622 gactaatccggttcgtgcatagaggcatgtgcattggccaatcgttgttctccctgaaaattgaacctggtattcactggatacgacatttgaaggagct 37382523  T
Q  142 cctcgccactggagcccaagcaactt 167  Q
    ||| ||||||| ||||||| ||||||    
T  37382522 ccttgccactgtagcccaaacaactt 37382497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 174
Target Start/End: Complemental strand, 48656276 - 48656163
Alignment:
Q  63 agaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttg-aaaggagctcctcgccactggagcccaa 160  Q
    |||||||||  ||| || ||||| |||||| ||||||||||||| |||| |||| | ||| |||||||||| ||||||||  || |||||||||||||||    
T  48656276 agaggcatgtgcacaggtcaagcgttgttcttcctgggaattgagcccgatatttctcgggtacgtccttggaaaggagcgtcttgccactggagcccaa 48656177  T
Q  161 gcaacttggtttat 174  Q
      ||||||||||||    
T  48656176 ataacttggtttat 48656163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 19651556 - 19651608
Alignment:
Q  119 cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||||||| ||||||||| | ||||||||||||||| ||||||||||    
T  19651556 cggatacgtccttggaaggagctcattgccactggagcccaaacaacttggtt 19651608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 18 - 141
Target Start/End: Complemental strand, 21429403 - 21429279
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| |  ||||| ||||||||| |  |||||||||||||||||| ||||||| || | ||||||| |||   ||| ||||||| |||||    
T  21429403 ggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatcgaacccgatattc 21429304  T
Q  118 c-cggatacgtccttgaaaggagct 141  Q
    | |||||||||| ||| ||||||||    
T  21429303 ctcggatacgtctttggaaggagct 21429279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 152
Target Start/End: Original strand, 24850676 - 24850770
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactg 152  Q
    ||||||||||||||| |||||| ||||  ||||||| ||||  ||||||| | |||||| |||||||||||||||| || |||||||| |||||||    
T  24850676 tgcgtagaggcatgcgcactggtcaagtgttgttcc-cctgataattgaatctggtatttcccggatacgtccttggaatgagctccttgccactg 24850770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 16450384 - 16450310
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaaccc 110  Q
    ||||| |||||| || || || ||||||||||||||  |||||||||||| ||||||| ||||||||| ||||||    
T  16450384 ggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaaccc 16450310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 17080127 - 17080061
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaa 102  Q
    |||| ||||||| ||||| || ||||||||||||||| |||||||||||| ||||||| | ||||||    
T  17080127 ggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccatgggaa 17080061  T

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Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 35 - 168
Target Start/End: Original strand, 8064824 - 8064957
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaa 134  Q
    |||||| |||||| ||||| || ||||||||||||||| |||||| ||||  || |||| | ||||||| |||||| |||||| | | ||||| |||  |    
T  8064824 tggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaacccagtattctcaggtacgttcttaga 8064923  T
Q  135 aggagctcctcgccactggagcccaagcaacttg 168  Q
    |||||||| | || ||| ||||| || |||||||    
T  8064924 aggagctctttgctactagagcctaaacaacttg 8064957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 11308156 - 11308241
Alignment:
Q  87 ttgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||||||||| |||||||||||||||||  ||| ||||| |||||||| ||||| | ||||  || |||||| ||||||||||    
T  11308156 ttgttcctcctggaaattgaacccggtattcgacgggtacgttcttgaaagtagctctttgccatgggtgcccaaacaacttggtt 11308241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 4738737 - 4738629
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| |  ||||| |||||| | | | || ||||||||| ||||| ||||||| |||| |||||||||||||     
T  4738737 tttttggctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgttcctcctgga 4738638  T
Q  101 aattgaacc 109  Q
    ||| |||||    
T  4738637 aatcgaacc 4738629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Original strand, 14597927 - 14597974
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaa 83  Q
    ||||| |||||| ||| |||||||||||||||||||| ||||||||||    
T  14597927 ggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaa 14597974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 176
Target Start/End: Original strand, 45789632 - 45789687
Alignment:
Q  121 gatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttataa 176  Q
    ||||| || ||||||||||||| | ||||| ||||||||| |||||||||||||||    
T  45789632 gatacttctttgaaaggagctcattgccaccggagcccaaacaacttggtttataa 45789687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 160
Target Start/End: Original strand, 55005335 - 55005458
Alignment:
Q  38 tgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaag 136  Q
    |||||||||| ||||  | |||||||||||||||| || ||| ||||| ||||| | |||| |||| |||  ||||| ||||| |||||||| ||| |||    
T  55005335 tgggcgactaatccgacttgtgcgtagaggcatgcgcaatggtcaagcgttgtttcccctgcgaatcgaattcggtatttcccagatacgtctttggaag 55005434  T
Q  137 gagctcctcgccactggagcccaa 160  Q
    |||||| | |||||  ||||||||    
T  55005435 gagctcattgccaccagagcccaa 55005458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 135
Target Start/End: Complemental strand, 6862286 - 6862209
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaa 135  Q
    ||||||||| ||||| ||||| ||||| ||| |||| |  |||||| ||||||||||||||| ||||||||||||||||    
T  6862286 tgcgtagagacatgcgcactgaccaagtattattccaca-gggaatcgaacccggtattccccggatacgtccttgaaa 6862209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 26479998 - 26480112
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagc 156  Q
    |||||||||||||||  ||||||||||  || |||| | |  |||| |||| ||||||||||    ||||| |||| ||||||||||| |||| ||||||    
T  26479998 tgcgtagaggcatgcgtactggccaagtgttattccccttaagaatcgaactcggtattccccatgtacgtacttggaaggagctccttgccagtggagc 26480097  T
Q  157 ccaagcaacttggtt 171  Q
    |||| ||||||||||    
T  26480098 ccaaacaacttggtt 26480112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 31588765 - 31588632
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggcca--agcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaagg 137  Q
    ||||||| ||||| || ||||||||| ||||| |||||||||  ||| ||||| |  ||||||||  |||||  |||| |||| ||||||||||  || |    
T  31588765 gcgactaatccggctcatgcgtagagacatgcgcactggccaagagcgttgtttcctctgggaatcaaacccaatattccccgaatacgtccttagaacg 31588666  T
Q  138 agctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||| | ||||| ||||||| ||||||||||    
T  31588665 agctccttgacactgaagcccaaacaacttggtt 31588632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 45721205 - 45721087
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||| | ||| ||| ||||||||||||| ||  ||||| |||||| ||||  | ||||||||||||| || || ||||||| |||| || | ||||      
T  45721205 tttttgactttcgcaccggtttccaacccattaaaggtggacgactaatccgacttgtgcgtagaggcacgcgcagtggccaaacattatttcccctgaa 45721106  T
Q  101 aattgaacccggtattccc 119  Q
    ||| |||||||||||||||    
T  45721105 aatggaacccggtattccc 45721087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 37369070 - 37369126
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcc 93  Q
    ||||||||||  ||||  ||||||||||||||||||||||||| ||| | |||||||    
T  37369070 gtgggcgacttatccgactcgtgcgtagaggcatgcacactggacaaacgttgttcc 37369126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 8e-45; HSPs: 74)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18915982 - 18915811
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| |||||||||||||| | ||||| ||||||| ||||| ||||||||||||||||||||||||||||||  ||||||| ||||||    
T  18915982 tttttggctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggg 18915883  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||||| |||||||||| ||| ||||||| ||||||| ||||||| ||||||||||    
T  18915882 aatcgaacccggtattccccgggtacgtccttggaagaagctccttgccactgaagcccaaacaacttggtt 18915811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 50503371 - 50503527
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| |||||| ||||||||||||| | ||||| |||||||||||||||||| |||||| ||||  ||||||| ||||||||| ||||||| ||||     
T  50503371 ggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaacccgatattc 50503470  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||||||||||||||||||||||||||||||||| ||| |||  ||||||||||||    
T  50503471 cccggatacgtccttgaaaggagctcctcgccactagagtccatacaacttggttta 50503527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 33004008 - 33004179
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||| | ||| ||| ||||| | |||||| ||||||||| ||||| ||||| |||||||||||||||||| |||||||||||||||||| | |||||     
T  33004008 tttttgcctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctgga 33004107  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||| ||| |||| |||||||||||||||| ||||||||||||  ||||||||||||||||||||||||    
T  33004108 aatcgaatccgatattccccggatacgtccttggaaggagctcctcatcactggagcccaagcaacttggtt 33004179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 43959815 - 43959986
Alignment:
Q  2 ttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggga 101  Q
    ||||||| ||| ||| ||||||| | ||||||  |||||||||||| ||||| |||||||||||||||||| |||||||||||| ||||||| |||||||    
T  43959815 ttttggctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggga 43959914  T
Q  102 attgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    |||||||||| |||| ||||| |||||| ||| ||||||| ||| ||||||||||||||| |||||| ||||    
T  43959915 attgaacccgatattccccgggtacgtcattggaaggagcaccttgccactggagcccaatcaacttagttt 43959986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 5855620 - 5855466
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| ||||||||  ||||  |||||| ||||  || ||||||||||||||| |||||||||||| ||||||||||||||||| ||||||||||||     
T  5855620 ggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattc 5855521  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||| ||||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  5855520 cccgaatacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 5855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 26325927 - 26325754
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||| ||| ||| ||| ||||||| |||||| | |||||| |||||| ||||| || ||||||||||||||| ||||| |||||  |||||||  |||||    
T  26325927 ttttaggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctggg 26325828  T
Q  101 aattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| ||||||| |||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  26325827 aatcgaacccgatattcctcggatacgtccttgaaaggagctccttgccactggagccctagcaacttggttta 26325754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 8764106 - 8763934
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| |  ||||| |||||| ||||| |||||||||||||||||| |||||||||||  ||||||| ||||||    
T  8764106 tttttggctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctggg 8764007  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||  ||||||| |||| ||||| |||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  8764006 aaacgaacccgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaacttggttt 8763934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 49078229 - 49078057
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| ||| || | |||||  |||||| ||||| || ||||||||||||||| |||||||||||  ||||| | ||||||    
T  49078229 tttttggctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctggg 49078130  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||| |||||||||||| |||||||||||||||  ||||||||||| |||||||||||||||||||||||||||    
T  49078129 aatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaagcaacttggttt 49078057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 41663849 - 41664019
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| | |||||| |||||| ||| | || ||||||||||||||| ||||| |||||  ||||||| ||||||    
T  41663849 tttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctggg 41663948  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggt 170  Q
    ||| |||||||||||| |||||||||||||||  ||||||||||| ||||||||||||||| |||||||||    
T  41663949 aatcgaacccggtattccccggatacgtccttagaaggagctccttgccactggagcccaaacaacttggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 2980965 - 2981095
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagc 140  Q
    |||||| ||||  ||||||||||||||||||||||||||||||  |||||||  |||||||| |||||| ||||| ||||||||||||| || |||||||    
T  2980965 cgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagc 2981064  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    |||| |||||| |||||||||||||||||||    
T  2981065 tccttgccactagagcccaagcaacttggtt 2981095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 17641997 - 17642171
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| |||  |||||| |||||| |  ||||| |||||| ||||| |||||||||||||||||| |||||||||||  ||||||| ||||||    
T  17641997 tttttggctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctggg 17642096  T
Q  101 aattgaacccggta-ttcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    ||| |||||| ||| |||| || ||||||| || ||||||||||| | ||||||||||||| |||||||||||||    
T  17642097 aatcgaacccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaacaacttggtttat 17642171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 40288483 - 40288641
Alignment:
Q  14 cactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggt 113  Q
    ||||||||||| |||||| |  | || ||||||| ||||| ||||| ||||||||||||| ||||||||| | ||||||| ||||| ||| |||||||||    
T  40288483 cactggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccggt 40288582  T
Q  114 att-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||| ||||||||||| || |||||||| |||||| |||||||||||||||||||    
T  40288583 attccccgaatacgtccttggaaagagctccttgccactcgagcccaagcaacttggtt 40288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 15238116 - 15238271
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    |||||||||||||| |  |||| ||||||| |  | ||||||||||||||||||| || ||||||||| ||| ||| ||||||||| ||||||| |||||    
T  15238116 ggtttccaacccaccaaaggtgagcgactaatatgattcgtgcgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaacccgatattc 15238215  T
Q  118 cc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||  | |||||||||| ||||||||||| |||| ||||||||||||||||||||||    
T  15238216 cctaggtacgtccttggaaggagctccttgccattggagcccaagcaacttggttt 15238271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 33418143 - 33418280
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| |||||| ||||||||||| |||||||||||| |||| || ||| ||||| ||| ||||||||| |||| |||||| ||| |    
T  33418143 ggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattctccgggtacgtctttgga 33418242  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttt 172  Q
    |||||||||| ||||||||||||||| |||||||||||    
T  33418243 aggagctccttgccactggagcccaaacaacttggttt 33418280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 168
Target Start/End: Original strand, 10172964 - 10173132
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| |  ||||||||| || ||||| || ||||||||||||||  |||||||||||| |||||| |  ||||    
T  10172964 ttttttgctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttctttatggg 10173063  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    ||||||| |||||||| ||| |||||||||||| ||||||| ||| ||||||||||||||| |||||||    
T  10173064 aattgaatccggtattccccagatacgtccttggaaggagcaccttgccactggagcccaaacaacttg 10173132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 10422868 - 10422732
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| || ||||||||||||||| |||||||||||  ||||||||||| | ||| |||||||||||| |||| ||||||| ||| |    
T  10422868 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaacccggtattccccgaatacgtcattgga 10422769  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| ||||||| ||||||| ||||||||||    
T  10422768 aggagctccttgccactgtagcccaaacaacttggtt 10422732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 45361875 - 45362035
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| ||||||||  ||||  |||||| ||||| |  ||||||| ||||||| |||||||||||| |||||||||||| |    
T  45361875 tttttagctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgag 45361974  T
Q  101 aattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaa 160  Q
    ||| ||||||||||||||| || |||||||||| ||||||||||| ||||||| |||||||    
T  45361975 aatcgaacccggtattcccagggtacgtccttggaaggagctccttgccactgaagcccaa 45362035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 11397917 - 11398052
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    ||||| |||||| ||||  || ||||||||||||| | || ||||||| | ||||||| ||| ||||| ||||||||||||| |||||||| |||||| |    
T  11397917 ggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcc-cctcggaatcgaacccggtattctccggatacatccttgga 11398015  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| ||||||||||||||||||||||||||    
T  11398016 aggagctccttgccactggagcccaagcaacttggtt 11398052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 34 - 171
Target Start/End: Original strand, 48798096 - 48798234
Alignment:
Q  34 ttggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttg 132  Q
    ||||| || ||||| ||||| || ||||||||||||||| |||| | ||||| ||||||| ||||| ||| ||||||| ||||||| ||||||||| |||    
T  48798096 ttggtaggtgactaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattg 48798195  T
Q  133 aaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
     ||||||||||| ||||||||||||| | ||||||||||    
T  48798196 gaaggagctccttgccactggagccccaacaacttggtt 48798234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 36 - 163
Target Start/End: Original strand, 33498867 - 33498995
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| || ||||||||||||||| |||||||||||| ||| |||||||| |||| |||||||||| || || | ||| ||||| ||    
T  33498867 ggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtattttccaggtacatccttaaa 33498966  T
Q  135 aggagctcctcgccactggagcccaagca 163  Q
    |||| ||||| ||||||||||||||||||    
T  33498967 aggaactccttgccactggagcccaagca 33498995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 55 - 174
Target Start/End: Complemental strand, 34878051 - 34877931
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactgg 153  Q
    ||||| |||||||||||| |||||||||||  ||||||| ||| ||||| ||||| ||||||||| || |||||||||| |||| |||||| |||||||     
T  34878051 tcgtgtgtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctccttgccactga 34877952  T
Q  154 agcccaagcaacttggtttat 174  Q
    ||||||| |||||||||||||    
T  34877951 agcccaaacaacttggtttat 34877931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 37339935 - 37339795
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgt-tcctcctgg 99  Q
    |||||||| ||| ||| |||||||||||||| |  |||||||||||| ||||| |||||||| ||||||||| |||||||||||| ||||  || |||||    
T  37339935 tttttggctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccctgg 37339836  T
Q  100 gaattgaacccggtatt-cccggatacgtccttgaaaggag 139  Q
    |||| |||||||||||| ||||| ||| |||||| ||||||    
T  37339835 gaatcgaacccggtattccccgggtacatccttggaaggag 37339795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 9659172 - 9659338
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| |||||||||||||| |  ||||| |||||| ||||| || |||||| |||||||| |||| | ||| | ||||||| ||||||    
T  9659172 ttttttgctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgttcc-cctggg 9659270  T
Q  101 aattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    ||| ||||||||||||||| || |||||||||  || |||||||| |||||||||||| |||||||||    
T  9659271 aatcgaacccggtattccccgagtacgtccttagaatgagctccttgccactggagcctaagcaactt 9659338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 55 - 172
Target Start/End: Original strand, 12036791 - 12036909
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||||||||| |||||||||||||||||||| ||| |||||  ||||| |||||| |  | |||||||||| |||||||| || ||||| ||    
T  12036791 tcgtgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaaacccagtattctctaggtacgtccttggaaggagcttcttgccaccgg 12036890  T
Q  154 agcccaagcaacttggttt 172  Q
    ||||||| |||||||||||    
T  12036891 agcccaaacaacttggttt 12036909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 96 - 172
Target Start/End: Complemental strand, 41743293 - 41743216
Alignment:
Q  96 ctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    |||||||| |||||||||||||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  41743293 ctgggaatcgaacccggtattcctcggatacgtccttggaaggagctccttgccaccggagcccaagcaacttggttt 41743216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 37 - 160
Target Start/End: Original strand, 30927756 - 30927880
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaa 135  Q
    |||| |||||| ||||| || |||||||||||||||||| ||||||||| |||||||  |||| ||| ||||||| || ||||| | |||||||||| ||    
T  30927756 gtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaacccgatatttcccaggtacgtccttggaa 30927855  T
Q  136 ggagctcctcgccactggagcccaa 160  Q
    ||||||||| |||||||||| ||||    
T  30927856 ggagctccttgccactggagtccaa 30927880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 167
Target Start/End: Complemental strand, 32929 - 32819
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||  ||||| |||||| ||||||||||||||||| | ||||| |||| ||| | |||||||||| ||||||||| | |||||||||||    
T  32929 tgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcggacccgatattcccccggtacgtccttggaaggagctcattgccactggagc 32830  T
Q  157 ccaagcaactt 167  Q
    |||| ||||||    
T  32829 ccaaacaactt 32819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 167
Target Start/End: Original strand, 892355 - 892457
Alignment:
Q  66 ggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaa 164  Q
    |||||||||| |||| |||  ||||||| ||| ||||| ||||||||||||||| || |||||||||||||||||||||| ||||||| ||||||| |||    
T  892355 ggcatgcacattggctaagtgttgttccccctaggaatcgaacccggtattccccgaatacgtccttgaaaggagctccttgccactgaagcccaaacaa 892454  T
Q  165 ctt 167  Q
    |||    
T  892455 ctt 892457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 17092505 - 17092643
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| |||||||||||||||| |||||||||||| | ||||| | ||||  ||| |||| || || |||||| |||||||| ||||    
T  17092505 ggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaactcgatatttcccgaatacgtccatgaa 17092604  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||||| || |||||| |||  ||||||||||||||||    
T  17092605 aggagcttcttgccactagagttcaagcaacttggttta 17092643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 18649362 - 18649516
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||||| ||||||  ||||||||| || || || |||| ||||||||||||| |||||| ||||| ||||||| ||||  ||| ||||||| |||||    
T  18649362 ggtttccaatccactaaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattc 18649461  T
Q  118 -ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
     || |||||||||||| ||||||||| |  ||||| |||  ||||||||||||||    
T  18649462 tccagatacgtccttggaaggagctcattaccactagagttcaagcaacttggtt 18649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 57 - 173
Target Start/End: Complemental strand, 45536767 - 45536651
Alignment:
Q  57 gtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggag 155  Q
    |||||||||||||||  |||||||||||| ||||||| | | | ||| ||||||||||||| |||| |||||| ||| ||| || ||||||||||| |||    
T  45536767 gtgcgtagaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtattctccgggtacgtcattggaag-agttcctcgccactagag 45536669  T
Q  156 cccaagcaacttggttta 173  Q
    ||||||||||||||||||    
T  45536668 cccaagcaacttggttta 45536651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 68 - 176
Target Start/End: Complemental strand, 51437517 - 51437408
Alignment:
Q  68 catgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaact 166  Q
    ||||| |||||| ||||| ||||||| | ||||||| ||||||| |||||| |||||||||||||||||||||||| | | ||||| ||||||| |||||    
T  51437517 catgcgcactggtcaagcgttgttccccatgggaatcgaacccgatattcctcggatacgtccttgaaaggagctcattgtcactgaagcccaaacaact 51437418  T
Q  167 tggtttataa 176  Q
    ||||| ||||    
T  51437417 tggttgataa 51437408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 36 - 159
Target Start/End: Complemental strand, 10336596 - 10336472
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaa 134  Q
    ||||| ||| || ||||| || ||||||||||||||| |||||| ||||| ||||||| ||||  ||| ||||||| ||||| ||||||||||| ||| |    
T  10336596 ggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccggatacgtctttgga 10336497  T
Q  135 aggagctcctcgccactggagccca 159  Q
    |||||||||| ||||||||| ||||    
T  10336496 aggagctccttgccactggaaccca 10336472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 136
Target Start/End: Complemental strand, 16263624 - 16263524
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaa 135  Q
    |||| |||||| ||||| |  ||||||||||||||| |||||||||||| ||||||||||||| ||| ||||| |||||| ||| |||||||||||||||    
T  16263624 gtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaacctggtattccccagatacgtccttgaaa 16263525  T
Q  136 g 136  Q
    |    
T  16263524 g 16263524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 37 - 172
Target Start/End: Complemental strand, 34697414 - 34697278
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaa 135  Q
    ||||||||||| ||||| || |||||||||||||||||||| ||||||  ||||||| |||  |||| ||||| |||||| |||| ||||||  ||| ||    
T  34697414 gtgggcgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaatcgaacctggtattccccgaatacgtttttggaa 34697315  T
Q  136 ggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||||||||| |||||   || ||||||||||||||||    
T  34697314 ggagctccttgccaccaaagtccaagcaacttggttt 34697278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 42744839 - 42744732
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||||||||| |||||||||||| |||||||||         ||||||||||||||| || |||||||||| ||||||||| | ||||||||    
T  42744839 tcgtgcgtagaggcatgctcactggccaagcgttgttcctc---------gaacccggtattccctgggtacgtccttggaaggagctcattgccactgg 42744749  T
Q  154 agcccaagcaacttggt 170  Q
    || ||||||||||||||    
T  42744748 agtccaagcaacttggt 42744732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 15466026 - 15465907
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||||||||  ||||| |||||| ||||||| ||||| ||| ||||| |||||| |||  ||||||||||| ||||||| | | | ||||||    
T  15466026 tcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtattccccaaatacgtccttggaaggagccctttgtcactgg 15465927  T
Q  154 agcccaagcaacttggttta 173  Q
    ||||||| ||||||||||||    
T  15465926 agcccaaacaacttggttta 15465907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 66 - 151
Target Start/End: Original strand, 34334353 - 34334439
Alignment:
Q  66 ggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccact 151  Q
    ||||||| |||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||||||| || |||||||| ||||||    
T  34334353 ggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaatgagctccttgccact 34334439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 6563502 - 6563393
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||| ||||  |||||||||||| ||||||| ||| ||||| ||||||||| |||  ||| ||| |||||| ||||||||||| ||||||||    
T  6563502 tcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctccttgccactgg 6563403  T
Q  154 agcccaagca 163  Q
    || |||||||    
T  6563402 agtccaagca 6563393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 52 - 172
Target Start/End: Original strand, 9853321 - 9853441
Alignment:
Q  52 ggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccac 150  Q
    |||||||| |||||||||||| ||||||  || | ||||| | ||| ||||| ||||||||||||  |||| ||| |||||| ||||||||||| |||||    
T  9853321 ggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaacccggtattttccgggtacatccttggaaggagctccttgccac 9853420  T
Q  151 tggagcccaagcaacttggttt 172  Q
    |||||||||| |||||||||||    
T  9853421 tggagcccaa-caacttggttt 9853441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 36 - 172
Target Start/End: Original strand, 14254296 - 14254433
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| || |||||| ||||||||  ||||||||||| ||||||| ||||  ||| |||| ||||||| |||| ||||||||||| |    
T  14254296 ggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattccccgaatacgtccttgga 14254395  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttt 172  Q
    | ||| |||| ||| |||||| | ||||||||||||||    
T  14254396 atgagttccttgcccctggaggctaagcaacttggttt 14254433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 16956581 - 16956432
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||||||||||| |||||| |  |||| | ||||| ||||| |||||||||||||||||| |||||| ||| | ||||| | |||| |    
T  16956581 ttttttgctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgag 16956482  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgcca 149  Q
    ||  |||| ||||||| ||||| |||||||||| ||||||||||| ||||    
T  16956481 aaccgaacacggtattccccgggtacgtccttggaaggagctccttgcca 16956432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 2567337 - 2567218
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    ||||| |||||||||||| |||||||||||| |||||   || |  ||| ||||||||||||| ||| ||||||||||| ||||||||||| |||| ||     
T  2567337 tcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcgaacccggtattctccgaatacgtccttggaaggagctccttgccagtga 2567238  T
Q  154 agcccaagcaacttggttta 173  Q
    ||||||| ||||||| ||||    
T  2567237 agcccaaacaacttgattta 2567218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 17 - 100
Target Start/End: Complemental strand, 10507797 - 10507714
Alignment:
Q  17 tggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| |||||| | |||||| |||||| ||||| || |||||||||| ||||||||||||||| | ||||||||||||||    
T  10507797 tggtttccgacccaccagtggtggacgactaatccggctcatgcgtagaggtatgcacactggccaaacgttgttcctcctggg 10507714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 32142874 - 32143005
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaa 135  Q
    |||| ||||||| | ||| || |||||| |||||||| |||||||||||  ||||||| ||||  ||| |||||||||||||| || |||||||||| ||    
T  32142874 ggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccggtattccagggtacgtccttggaa 32142973  T
Q  136 ggagctcctcgccactggagcccaagcaactt 167  Q
     |||||| | ||||||| || |||| ||||||    
T  32142974 tgagctctttgccactgaagtccaaacaactt 32143005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 44969779 - 44969665
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||||||| ||||||| | |||| | || ||| |||||| ||||| || ||||||| |||||||||||||||||||| ||||| |||||| |    
T  44969779 tttttggctttcacaccggtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgtt-ctcctgag 44969681  T
Q  101 aattgaacccggtatt 116  Q
    ||| ||||| ||||||    
T  44969680 aatcgaacctggtatt 44969665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 168
Target Start/End: Original strand, 47312949 - 47313059
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||| | |||||||||| | ||||||| ||| |||||  ||||||||||||||  |||||||||||| ||||| ||| | |||||||||||    
T  47312949 tgcgtagaggcatacgcactggccaaacgttgttcc-cctaggaatcaaacccggtattccccagatacgtccttggaaggatctcgttgccactggagc 47313047  T
Q  157 ccaagcaacttg 168  Q
    |||| |||||||    
T  47313048 ccaaacaacttg 47313059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 31152777 - 31152659
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactgg 153  Q
    ||||| ||||||||| || ||||| |||||| || |||| || || ||| ||||||||||||||| || ||| |||||| || |||||||| |||||| |    
T  31152777 tcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaacccggtattccctgggtacatccttggaaagagctccttgccactag 31152678  T
Q  154 agcccaagcaacttggttt 172  Q
    ||||||| |||||||||||    
T  31152677 agcccaaacaacttggttt 31152659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 31576597 - 31576711
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgg-atacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||  | || ||||||||||||||| | |||| |||| ||||||||||||  ||| ||||||||||  || |||||||| |||||| ||||    
T  31576597 tgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaacccggtattttcgggatacgtccttagaatgagctccttgccactagagc 31576696  T
Q  157 ccaagcaacttggtt 171  Q
    |||| ||||||||||    
T  31576697 ccaaacaacttggtt 31576711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 42 - 170
Target Start/End: Original strand, 45726467 - 45726596
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagc 140  Q
    |||||| ||||| || ||||||||| ||| | ||||||||||   || ||||||||| |||| ||||| |||||||| ||| |||||||||| | ||||     
T  45726467 cgactaatccggctcatgcgtagagacatacgcactggccaaatgttattcctcctgagaatcgaaccaggtattcctcgggtacgtccttggagggagg 45726566  T
Q  141 tcctcgccactggagcccaagcaacttggt 170  Q
    || | || ||||||||||||||||||||||    
T  45726567 tctttgcaactggagcccaagcaacttggt 45726596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 32150950 - 32151082
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaa 134  Q
    |||| ||||||| | ||| || |||||| |||||||| ||||| ||||   ||||||| ||||| ||| ||||| | |||||| || | ||||||||| |    
T  32150950 ggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaacctgatattcctcgaaaacgtccttgga 32151049  T
Q  135 aggagctcctcgccactggagcccaagcaactt 167  Q
    |||||||||| ||||||||||||||| ||||||    
T  32151050 aggagctccttgccactggagcccaaacaactt 32151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 41696626 - 41696761
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaa 134  Q
    |||| ||||||| || | ||||||||||||||||| |||||||| ||||  ||  ||| ||||| ||| ||||||| |||||| | |||||||||||| |    
T  41696626 ggtgagcgactaatctgattcgtgcgtagaggcatacacactggtcaagtgttaatccccctggaaatcgaacccg-tattcctcagatacgtccttgga 41696724  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||| | |||||| ||| | |||||||||||||    
T  41696725 aggagctcattgccactagagtctaagcaacttggtt 41696761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 34719891 - 34719720
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| |||  |||||| |||||| |  |||| ||||||| || |  |||||||||||||||||| |||||| ||||| || ||||   ||||    
T  34719891 tttttggctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtggg 34719792  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||| ||||| ||| | |||||||||| ||||||||||| |||| | ||||| |  ||||||||||    
T  34719791 aatcgaacccagtattccccaggtacgtccttggaaggagctccttgccattagagccaacacaacttggtt 34719720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 17389829 - 17389716
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||| ||||||||| |||||| ||| ||||||||| || |  ||| ||| ||| |||| |||||| ||||| ||||||||||||||| ||||||||||     
T  17389829 tgcgtggaggcatgcgcactggtcaaacattgttccccc-gaaaatcgaatccgatatttcccggaaacgtcattgaaaggagctccttgccactggagt 17389731  T
Q  157 ccaagcaacttggtt 171  Q
    |||||| ||||||||    
T  17389730 ccaagctacttggtt 17389716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 42 - 171
Target Start/End: Original strand, 17988694 - 17988823
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagc 140  Q
    |||||| |||||||| |||||||||| |||| |||||||||||||||||| | ||||  |||  |||| ||||||||| || |||||||||  |||||||    
T  17988694 cgactaatccggttcatgcgtagaggtatgcgcactggccaagcattgtttc-cctgaaaatcaaacctggtattcccggggtacgtccttagaaggagc 17988792  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    || | | |||| ||| |||||||| ||||||    
T  17988793 tcattggcactagagtccaagcaatttggtt 17988823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 41 - 111
Target Start/End: Original strand, 21849238 - 21849307
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccg 111  Q
    ||||||| ||||| |||||||||||||||||| |||| ||||||| ||||||| ||||||||| |||||||    
T  21849238 gcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttcc-cctgggaatcgaacccg 21849307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 65 - 173
Target Start/End: Complemental strand, 18808316 - 18808207
Alignment:
Q  65 aggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgccactggagcccaagca 163  Q
    |||||||| |||||| ||||| |||||||  ||| |||||||||| | ||||||   |||||||||||| ||| | ||| | ||||||||||||||| ||    
T  18808316 aggcatgcgcactggtcaagcgttgttccctctgagaattgaacctgttattccttagatacgtccttggaagaaactcattgccactggagcccaaaca 18808217  T
Q  164 acttggttta 173  Q
    ||||||||||    
T  18808216 acttggttta 18808207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 81 - 172
Target Start/End: Original strand, 937559 - 937650
Alignment:
Q  81 caagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||||| ||||||| ||||||||| ||||||| ||||||  || |||||||||||||| ||||| | | ||||||||||||| |||||||||||    
T  937559 caagcgttgttccccctgggaatcgaacccg-tattcctcgagtacgtccttgaaagaagctcattgtcactggagcccaaacaacttggttt 937650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 68 - 171
Target Start/End: Original strand, 8905211 - 8905314
Alignment:
Q  68 catgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaact 166  Q
    ||||| |||||||||||| ||||||| ||| | ||| | ||||| ||||| ||||||||||| ||| ||||||||||| |||||| ||| |||| |||||    
T  8905211 catgcgcactggccaagcgttgttcc-ccttgaaatcgtacccgatattctccggatacgtcattggaaggagctccttgccactagagtccaaacaact 8905309  T
Q  167 tggtt 171  Q
    |||||    
T  8905310 tggtt 8905314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 26660214 - 26660082
Alignment:
Q  40 ggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaagga 138  Q
    |||||||| ||||| || |||||||||||||||  ||||  |||   ||||||| | ||| ||| ||||||||||||||| || |||||| ||  ||| |    
T  26660214 ggcgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaacccggtattccccgaatacgtcattcgaagaa 26660115  T
Q  139 gctcctcgccactggagcccaagcaacttggtt 171  Q
     ||| | ||||||||||||||||||||||||||    
T  26660114 actctttgccactggagcccaagcaacttggtt 26660082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 37 - 172
Target Start/End: Original strand, 46929767 - 46929902
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaa 135  Q
    |||| |||||| ||||| || || || ||||||||| || ||||||||| |||||| |  ||| ||| |||| || ||||| || |||||||| ||| ||    
T  46929767 gtggacgactaatccggctcatgtgtggaggcatgcgcattggccaagcgttgttcttt-tggaaatcgaactcgatattctccagatacgtctttggaa 46929865  T
Q  136 ggagctcctcgccactggagcccaagcaacttggttt 172  Q
    |||||| || |||||| ||||||||||||||||||||    
T  46929866 ggagcttcttgccactagagcccaagcaacttggttt 46929902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 173
Target Start/End: Original strand, 50371864 - 50372000
Alignment:
Q  38 tgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaag 136  Q
    |||||||||| ||||| | ||||||||| ||||||  ||||||||||| |||||| |||||  ||| |||| || || ||  | ||||| |||||  |||    
T  50371864 tgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgttgttcttcctgaaaatcgaacacgctatttttcagatacatccttagaag 50371963  T
Q  137 gagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||||||| |||||| |||||||| ||| ||||||||    
T  50371964 gagctccttgccacttgagcccaaacaatttggttta 50372000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 4581675 - 4581758
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaag 84  Q
    ||||| || ||| ||| ||||||| |||||| |  ||||| |||||| ||||| |||||||||||||||||| |||||||||||    
T  4581675 ttttttgctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaag 4581758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 43 - 173
Target Start/End: Complemental strand, 25165473 - 25165344
Alignment:
Q  43 gactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaaaggagct 141  Q
    ||||| ||||| | |||| ||||||||||| |||||||  ||  ||||||| ||||  ||| ||| |||||||||||  | |||||| ||| ||||||||    
T  25165473 gactaatccggcttgtgcctagaggcatgcgcactggcagagtgttgttcc-cctgataatcgaatccggtattccccaggtacgtc-ttggaaggagct 25165376  T
Q  142 cctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||| |||||||||||||||||||||    
T  25165375 ccttgccactagagcccaagcaacttggttta 25165344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 151
Target Start/End: Original strand, 17358521 - 17358615
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccact 151  Q
    |||||| |||||||| || ||| ||||| ||||||  |||| |||| |||||||||||| |||  |||||||||||||| |||||||| ||||||    
T  17358521 tgcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaacccggtattccccaaatacgtccttgaaatgagctccttgccact 17358615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 35211165 - 35211275
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||||||| ||||||| |||||| |  ||||| |||||| | | | || |||||||||||||||  | |||| ||||||||||||| ||||     
T  35211165 tttttggctttcacaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagaggcatgcgtattggctaagcattgttccttctgga 35211264  T
Q  101 aattgaacccg 111  Q
    ||| |||||||    
T  35211265 aatcgaacccg 35211275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 5504111 - 5503975
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaa 134  Q
    ||||| |||||| ||||| || ||||||||||||||  ||||   ||||| |||||   |||| |||| ||||| | |||||||  ||||||| || | |    
T  5504111 ggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaacctgatattccccagatacgttctcgga 5504012  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| ||||||||| ||||| ||||||||||    
T  5504011 aggagctccttgccactggaacccaaacaacttggtt 5503975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 40226357 - 40226409
Alignment:
Q  122 atacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    ||||||||||| ||||||||||| ||||||| | ||||| |||||||||||||    
T  40226357 atacgtccttggaaggagctccttgccactgaaacccaatcaacttggtttat 40226409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 97 - 167
Target Start/End: Original strand, 1764278 - 1764349
Alignment:
Q  97 tgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    ||||||| ||| |||||||| ||||| |||||||||| ||||||||||| ||||| | ||||||| ||||||    
T  1764278 tgggaatcgaatccggtatttcccgggtacgtccttggaaggagctccttgccacagaagcccaaacaactt 1764349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 144
Target Start/End: Complemental strand, 26258792 - 26258667
Alignment:
Q  19 gtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-c 117  Q
    |||||||||||||||  ||||| ||| || ||||  || |||||| |||||||  ||||| |||||| ||| || ||||| |||| ||| |||||||| |    
T  26258792 gtttccaacccactaaaggtggacgattaatccgactcatgcgtaaaggcatgtgcactgaccaagcgttg-tcttcctgagaatcgaatccggtattcc 26258694  T
Q  118 ccggatacgtccttgaaaggagctcct 144  Q
    |||| |||||| ||| |||||||||||    
T  26258693 ccgggtacgtctttggaaggagctcct 26258667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 31734349 - 31734237
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||| ||||||||||||| |||||||||| | ||||| | ||| | ||| ||| || ||||||| ||| ||| |||||| |||| |||||| || ||||     
T  31734349 tcgtacgtagaggcatgcgcactggccaatcgttgtttcccctag-aatcgaatccagtattcctcgggtacatccttggaaggtgctccttgctactga 31734251  T
Q  154 agcccaagcaactt 167  Q
    ||||||||||||||    
T  31734250 agcccaagcaactt 31734237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 35 - 116
Target Start/End: Original strand, 42710165 - 42710246
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt 116  Q
    |||||| |||||| | |||||  ||||||||||||||| ||||||||||| |||||| | ||||  ||| ||||||| ||||    
T  42710165 tggtggacgactaattcggtttatgcgtagaggcatgcgcactggccaagtattgtttcccctgaaaatcgaacccgatatt 42710246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 43 - 119
Target Start/End: Original strand, 28324615 - 28324691
Alignment:
Q  43 gactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc 119  Q
    ||||| ||||| || ||||||||||||||| ||||| |||||  ||||| | || |||||| ||||||| |||||||    
T  28324615 gactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatattccc 28324691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 55 - 83
Target Start/End: Complemental strand, 50952294 - 50952266
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaa 83  Q
    |||||||||||||||||||||||||||||    
T  50952294 tcgtgcgtagaggcatgcacactggccaa 50952266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 3e-44; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 14 - 171
Target Start/End: Original strand, 51682960 - 51683118
Alignment:
Q  14 cactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggt 113  Q
    ||||||||||| |||||| ||||||||||||||| ||||| ||||| | |||||||||| |||||| ||||| ||||||| ||||||||| ||||| |||    
T  51682960 cactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggt 51683059  T
Q  114 att-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||    
T  51683060 attccccggatacgtctttggaaggagctcctcgccactggagcccaaacaacttggtt 51683118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 15320300 - 15320127
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||  |||||| |  |||||||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| |     
T  15320300 tttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcga 15320201  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||||||| ||||| |||||||||| ||||||||||| |||||||||| |||| ||||||||||||    
T  15320200 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggttta 15320127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 54261340 - 54261166
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||| | ||| ||| ||||||| ||||||||  ||||  |||||| ||||| || ||||||||||||||| |||||||||||| ||||||||||| ||    
T  54261340 tttttgactttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctagg 54261241  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    ||| |||||||||||| ||| | |||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  54261240 aatcgaacccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtttat 54261166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 29136027 - 29135855
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| |||  || |||||||||||||| | ||||||  ||||| ||||| || ||||||||||||||| |||||||||||  ||||||| ||||||    
T  29136027 tttttggctttcgtaccggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggg 29135928  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||| ||| |||||||| |||||||||||||||| ||| ||||||| ||||||||||||||||||| |||||||    
T  29135927 aatcgaatccggtattccccggatacgtccttggaagaagctccttgccactggagcccaagcaatttggttt 29135855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 25295074 - 25294903
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| |||||||||||||| | |||||| |||||| ||||| || ||| ||||||||||| |||||||||||  ||||| | || | |    
T  25295074 tttttggctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagag 25294975  T
Q  101 aattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||  |||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  25294974 aatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 25294903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 28572204 - 28572371
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| |  |||||||||||| ||||| ||||||||||||||||||| ||||||||||| ||||| | ||||||    
T  28572204 tttttggctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctggg 28572303  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    ||| |||||| ||||| ||||| | ||| |||||||||||||||| ||||||||||| ||||||||||    
T  28572304 aatcgaacccagtattccccgggtgcgttcttgaaaggagctccttgccactggagcacaagcaactt 28572371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 26207811 - 26207965
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| |||||||| |  ||| |||||| ||||| || |||||||||||||||||||||| ||||| ||||||| | ||||||| ||||||||||||     
T  26207811 ggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccggtattc 26207910  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| ||| |||||| ||||||||||| ||||||||||||||||||||||||||    
T  26207911 cccgggtacatccttggaaggagctccttgccactggagcccaagcaacttggtt 26207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 6462526 - 6462358
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||  ||| ||| |||||||||||||||| |  ||| |||||| ||||| || ||||||||||||||| |||||||||||| ||||||  |||| |    
T  6462526 tttttggttttcgcaccggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtg 6462427  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    ||| |||||||||||| ||| |||||||||||| ||||||||||| |||||| ||||||||||||||||    
T  6462426 aatcgaacccggtattccccagatacgtccttggaaggagctccttgccactagagcccaagcaacttg 6462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 37 - 172
Target Start/End: Complemental strand, 39849149 - 39849014
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaa 135  Q
    ||||||||||| ||||| || |||||||||||||||||||||||||||| |||||||| |||||||| |||||||  |||||| || |||||||||| ||    
T  39849149 gtgggcgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgttcct-ctgggaatcgaacccgaaattccctgagtacgtccttggaa 39849051  T
Q  136 ggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||||||||| ||||||||||||||||| |||||||||    
T  39849050 ggagctccttgccactggagcccaagcgacttggttt 39849014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 35 - 173
Target Start/End: Original strand, 42412801 - 42412940
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttga 133  Q
    ||||| ||||||| ||||| || ||||||||||||||  |||| ||||||| ||||||| || |||||| ||||||||||||||| |||||||||||||     
T  42412801 tggtgagcgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttgg 42412900  T
Q  134 aaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||||||||| |||| |||||||||||||||||||||||    
T  42412901 aaggagctccttgccattggagcccaagcaacttggttta 42412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 10040653 - 10040500
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    |||||||||||||| |  ||||| |||| | ||||| |||||||||||||||||| |||||||||||| ||||||| |||| |||| ||||||| ||||     
T  10040653 ggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcc-cctgagaatcgaacccgatattc 10040555  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| |||||||||  ||||||||||| ||||||||||||||||||||||||||    
T  10040554 cccgggtacgtccttagaaggagctccttgccactggagcccaagcaacttggtt 10040500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 30767253 - 30767407
Alignment:
Q  14 cactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggt 113  Q
    |||| |||||| |||||| |  |||||||||||| ||||| ||||||||||||||||||||||||||||||  ||||||| ||||| ||| ||||||| |    
T  30767253 cactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaacccgat 30767352  T
Q  114 att-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    ||| ||| | ||| |||||| ||||| ||||| ||||||||||||||||||||||    
T  30767353 attccccaggtacatccttggaaggaactccttgccactggagcccaagcaactt 30767407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 13894005 - 13893869
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||||||||||| ||||| ||||| |||||||||||| || || |||||| ||||||| ||||| |||  ||||||||||| |||||| ||||||||| |    
T  13894005 ggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaacccggtattccccggacacgtccttgga 13893906  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  13893905 aggagctccttgccactggagcccaaacaacttggtt 13893869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 174
Target Start/End: Complemental strand, 49543615 - 49543459
Alignment:
Q  19 gtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc 118  Q
    |||||| ||||||||  |||||||||||| | ||| |||||||||||||||||||||||| |||| | ||||||| | || |||| ||||||| ||||||    
T  49543615 gtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaacccgatattcc 49543516  T
Q  119 c-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    | ||||||||||||| ||||||||||| ||||||  ||||||| ||| |||||||||    
T  49543515 cgggatacgtccttggaaggagctccttgccactaaagcccaaacaaattggtttat 49543459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 35316034 - 35315899
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaa 135  Q
    ||||||||||| ||| | || ||||||||||||||| |||||||||||  ||||||| ||||||||| ||||||| ||||| |||| |||||||||| ||    
T  35316034 gtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaa 35315935  T
Q  136 ggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||| | ||||||||||||||| ||||||||||    
T  35315934 ggagctctttgccactggagcccaaacaacttggtt 35315899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 41630505 - 41630676
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| |||||||  |||||| ||| || |  |||||||||||| ||||| || || |||||||||||| |||||| ||||| ||||||| | ||||    
T  41630505 tttttggctttcacaccagtttccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttggg 41630604  T
Q  101 aattgaacccggta-ttcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||||||| || |||| ||||||| || ||||||||||| | ||||||||||||| ||||||||||    
T  41630605 aattgaacccggtattttccggttacgtccatggaaggagctccttgtcactggagcccaaacaacttggtt 41630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 48342093 - 48341963
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagc 140  Q
    |||||| || ||||| ||||||||||||||| |||| ||||||| ||||||| ||| ||||| |||||||||||| ||| | |||||||||| |||||||    
T  48342093 cgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaacccggtattccccaggtacgtccttggaaggagc 48341994  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    |||| ||||||||||||||| ||||||||||    
T  48341993 tccttgccactggagcccaaacaacttggtt 48341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 7328922 - 7328786
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||||||||||| ||||| || |||||| |||||||| |||||||||||  ||||||| ||||||||| |||||||||||| ||||| |||||||||| |    
T  7328922 ggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtatttcccgggtacgtccttgga 7328824  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttt 172  Q
    |||| ||||| |||||| |||| |||||||||||||||    
T  7328823 aggaactccttgccactagagcacaagcaacttggttt 7328786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 35 - 173
Target Start/End: Complemental strand, 3763130 - 3762992
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttga 133  Q
    |||||| |||||| ||| |||||||||||||| ||||||||||| |||||| |||||||| ||| |||| ||| |||||| |||||||||||||||||||    
T  3763130 tggtggacgactaatccagttcgtgcgtagagacatgcacactgaccaagcgttgttcct-ctgtgaatcgaatccggtatttcccggatacgtccttga 3763032  T
Q  134 aaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||||||| | | |||| |||| ||| ||||||||||||    
T  3763031 aaggagctctttgtcactagagctcaaacaacttggttta 3762992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 7650341 - 7650170
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| |||||||||||||| |  |||||||||||| ||||| |||||||||||| ||| |  ||||||||||  ||||||| |||||     
T  7650341 ttttttgctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctgga 7650242  T
Q  101 aattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||||||  | ||| |||||||||||| ||||| ||||||||| ||||| ||||||||||    
T  7650241 aatcgaacccggtattccctaagtacatccttgaaaggaactccttgccactggaacccaaacaacttggtt 7650170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 29128033 - 29127862
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||  ||||||| |||||| |  |||||||||||| ||||| || ||||||||||||||| ||||| |||||  ||||||  |||||     
T  29128033 tttttggctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctgga 29127934  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||| |||| ||| |||||||||||| ||||| ||||| ||||||||||||||| ||||||||||    
T  29127933 aatcgaacccgatattccccagatacgtccttggaaggatctccttgccactggagcccaaacaacttggtt 29127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 18 - 172
Target Start/End: Complemental strand, 47471928 - 47471774
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| |  ||||| |||||| | ||| || |||||||| |||||| |||| ||||||||||||||| ||||||||| |||||||||||||    
T  47471928 ggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttcc-cctgggaatcgaacccggtattc 47471830  T
Q  118 ccg-gatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||  | |||||||||| ||||||||| | |||||| ||||||||||||||||||||    
T  47471829 cctaggtacgtccttggaaggagctctttgccactagagcccaagcaacttggttt 47471774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 3755643 - 3755513
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagc 140  Q
    |||||| ||||| || ||||||||| ||||| |||||| ||| | ||||||||||||||||| |||  |||||||||| |||||||||||||||| ||||    
T  3755643 cgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtccttgaaaagagc 3755544  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    || | |||||||||| |||||||||||||||    
T  3755543 tctttgccactggagtccaagcaacttggtt 3755513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 45877527 - 45877397
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagc 140  Q
    |||||| ||||| || ||||||||||||||  |||||||||||  ||||| | ||||| ||| ||||||||||||||| ||||||||||||| |||| ||    
T  45877527 cgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtccttggaaggggc 45877428  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    |||| ||||||||||||||| ||||||||||    
T  45877427 tccttgccactggagcccaaacaacttggtt 45877397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 46529924 - 46530034
Alignment:
Q  62 tagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgccactggagcccaa 160  Q
    ||||||||||||||||||| |||||||||| |  ||| |||| |||||||||||||||  | |||||||||||||||||||||| |||||||||||||||    
T  46529924 tagaggcatgcacactggcgaagcattgtttcctctgagaatcgaacccggtattccccaggtacgtccttgaaaggagctccttgccactggagcccaa 46530023  T
Q  161 gcaacttggtt 171  Q
     ||||||||||    
T  46530024 acaacttggtt 46530034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 36 - 173
Target Start/End: Original strand, 32873577 - 32873714
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaa 135  Q
    |||||||||||| || || || | ||||||||||||  |||||| ||||| ||||||  ||| ||||| ||||| ||||||||||| |||||||||| ||    
T  32873577 ggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattcccgggtacgtccttggaa 32873676  T
Q  136 ggagctcctcgccactggagcccaagcaacttggttta 173  Q
     |||||||| ||||||||||||||| ||||||||||||    
T  32873677 tgagctccttgccactggagcccaaacaacttggttta 32873714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 49198431 - 49198294
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttga 133  Q
    |||||| |||||| ||||| || ||||||||||||||| |||||||||||  ||||||| ||| ||||| |||||||||||| |||||||| |||||||     
T  49198431 tggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccggatatgtccttgg 49198332  T
Q  134 aaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| | ||||| | ||||||||||||| ||||||||||    
T  49198331 aagaaactccttgtcactggagcccaaacaacttggtt 49198294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 40 - 171
Target Start/End: Complemental strand, 10855459 - 10855327
Alignment:
Q  40 ggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaagga 138  Q
    |||||||| | ||||||||||||||||||||||  ||||||||||| ||||||| ||||| |||  ||||||||| |||||   ||| |||||| |||||    
T  10855459 ggcgactaattcggttcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaagga 10855360  T
Q  139 gctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||| ||||||||||||||| ||||||||||    
T  10855359 gctccttgccactggagcccaaacaacttggtt 10855327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 60 - 171
Target Start/End: Original strand, 11687161 - 11687273
Alignment:
Q  60 cgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagccc 158  Q
    ||||||||||||| |||||||||||||||||||| |||| ||||  |||||||||||| || | |||||||||| |||||||| || |||||||||||||    
T  11687161 cgtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccaggtacgtccttggaaggagcttcttgccactggagccc 11687260  T
Q  159 aagcaacttggtt 171  Q
    || ||||||||||    
T  11687261 aaacaacttggtt 11687273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 31072992 - 31072824
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||||||| || |  ||||| ||| || || || |||||||||||||||||  ||||| |||||| ||||||| |||||     
T  31072992 ttttttgctttcgcaccggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctgga 31072893  T
Q  101 aattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    ||| ||||| ||||||| |||| |||||||||||||||||||||| |||| |||||||||| |||||||    
T  31072892 aatcgaacctggtattctccgggtacgtccttgaaaggagctccttgccattggagcccaaacaacttg 31072824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 37 - 172
Target Start/End: Complemental strand, 33251740 - 33251604
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaa 135  Q
    |||| |||||| ||||| || |||||||||||||||||||||||||| | |||||||  | |||||| |||||||||||| |||  ||||||||||| ||    
T  33251740 gtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcccctaatacgtccttggaa 33251641  T
Q  136 ggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||||||| | ||||| ||||||||| |||||||||||    
T  33251640 ggagctcattgccaccggagcccaaacaacttggttt 33251604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 47749133 - 47749268
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    |||||||||||| | ||| |||||||||||||||||| |||||||||||  ||||||| ||| ||||| ||||||||||||||| ||||||||||||| |    
T  47749133 ggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgttcc-cctaggaatcgaacccggtattccctggatacgtccttgga 47749231  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || ||||| |  |||||||||||||| ||| ||||||    
T  47749232 agaagctcattaccactggagcccaaacaatttggtt 47749268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 172
Target Start/End: Original strand, 29762165 - 29762320
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| | |||||| |||||| ||| | || ||| ||||||||||| |||||||||||  ||||| | |||| |||| | ||||| |||||    
T  29762165 ggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcggacccgatattc 29762264  T
Q  118 ccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    || || ||| |||||| ||||||||||| |||||||||||||||||||||||||||    
T  29762265 cccgaatacatccttggaaggagctccttgccactggagcccaagcaacttggttt 29762320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 51060274 - 51060445
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||| | |||||| |||||| ||| |||| ||||||||||||||| ||||| |||||  ||||||| |||| |    
T  51060274 tttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgag 51060373  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||| |||| ||||||||  |||||| ||||||||  | |||||||||| |||| ||||||||||    
T  51060374 aatcgaacccgatattccccggatagatccttggaaggagctatttgccactggagtccaaacaacttggtt 51060445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 26 - 149
Target Start/End: Original strand, 15795512 - 15795635
Alignment:
Q  26 acccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggata 124  Q
    |||||| ||||||||||||||| | | | |||||||||||||||||| ||||| |||||| ||||||| ||||||||| |||| ||||||| ||||| ||    
T  15795512 acccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgttcc-cctgggaatcgaactcggtattccccgggta 15795610  T
Q  125 cgtccttgaaaggagctcctcgcca 149  Q
    |||||||| ||||||||| ||||||    
T  15795611 cgtccttggaaggagctcatcgcca 15795635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 41 - 171
Target Start/End: Original strand, 7310736 - 7310867
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggag 139  Q
    ||||||| ||||| |||||||||||||||||||||| || ||||  |||||||  |||||||| |||||||||||||| | | ||||| |||| ||||||    
T  7310736 gcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaacccggtattcctcaggtacgttcttggaaggag 7310835  T
Q  140 ctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| | ||||| ||||||||| ||||||||||    
T  7310836 ctcattgccaccggagcccaatcaacttggtt 7310867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 55 - 176
Target Start/End: Complemental strand, 30045881 - 30045759
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||| ||||| |||||||||||| ||||||| ||| ||||| |||||||||||||||    ||||| ||| |||||||||| | |||||| |    
T  30045881 tcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaacccggtattccccatgtacgttcttaaaaggagctcattgccacttg 30045782  T
Q  154 agcccaagcaacttggtttataa 176  Q
    |||||||||||||||||| ||||    
T  30045781 agcccaagcaacttggttaataa 30045759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 40944940 - 40944826
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    |||||||||||||||| |||||  |||  ||||||| ||||||||| |||| |||||||| | ||||||||||||| |||||||| || ||||| |||||    
T  40944940 tgcgtagaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattctctggatacgtccttggaaggagcttcttgccaccggagc 40944841  T
Q  157 ccaagcaacttggtt 171  Q
    |||||||||||||||    
T  40944840 ccaagcaacttggtt 40944826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 41 - 173
Target Start/End: Complemental strand, 28242352 - 28242219
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggag 139  Q
    ||||||| ||||  || ||| ||||||||||  |||||||||| ||||||||||||||| |||  |||||||||||| ||||||||||| ||| ||||||    
T  28242352 gcgactaatccgcctcatgcatagaggcatgtgcactggccaaacattgttcctcctggcaatctaacccggtattctccggatacgtcattggaaggag 28242253  T
Q  140 ctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |  |||| ||||| ||||||||||||||||    
T  28242252 ctctttaccaccggagctcaagcaacttggttta 28242219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 55 - 170
Target Start/End: Complemental strand, 41219652 - 41219537
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagctcctcgccactgga 154  Q
    ||||||| |||||||| | |||||||||| | |||||||||||| |||| ||||  |||||||||| ||||||||||  ||||||||| | || || |||    
T  41219652 tcgtgcgcagaggcatacgcactggccaaacgttgttcctcctgagaatcgaacttggtattcccgtatacgtccttagaaggagctcattgcaacggga 41219553  T
Q  155 gcccaagcaacttggt 170  Q
    ||||||||||||||||    
T  41219552 gcccaagcaacttggt 41219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 49082903 - 49082772
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    |||||| ||||| || | |||||| ||||| |||||| ||||||| |||| ||||||  ||||||||| |||| |||||||||| ||||||||||||  |    
T  49082903 ggtgggtgactaatctgattcgtgtgtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttaga 49082804  T
Q  135 aggagctcctcgccactggagcccaagcaact 166  Q
    |||||||||  ||||||||||||||| |||||    
T  49082803 aggagctccctgccactggagcccaaacaact 49082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 4638251 - 4638097
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-tt 116  Q
    ||||||| ||||| ||  ||||||| |||| ||||| ||||||||||||| |||| |||||| ||||| ||||| ||||||||||| |||||   || ||    
T  4638251 ggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaacctattattt 4638152  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||  ||||||||||| |||||| ||||| ||||||| || |||| ||||||||||    
T  4638151 ccaagatacgtccttaaaaggaactccttgccactgaagtccaaacaacttggtt 4638097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 144
Target Start/End: Original strand, 52364847 - 52364937
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcct 144  Q
    |||||||||||||||||| |||||| ||||| |||||||| |||||||| |||| ||||||| ||||| |||||||||| |||||||||||    
T  52364847 tcgtgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattccccgggtacgtccttggaaggagctcct 52364937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 3136687 - 3136859
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| ||| || |  ||||| |||||| ||||  || ||||||||||||||| ||||| |||||  ||||||| ||||      
T  3136687 tttttggctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttcc-cctgaa 3136785  T
Q  101 aattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| ||| ||||||||||| || ||||||||||||||||||| || ||||| ||||||||| |||||| |||||    
T  3136786 aatcgaatccggtattccccgggtacgtccttgaaaggagcttcttgccacgggagcccaaacaactttgttta 3136859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 167
Target Start/End: Original strand, 3507543 - 3507694
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| |  |||| ||||||| ||||| |||||||||||||||||| |||||||||||  |||||||  || |||||  ||||||||||||    
T  3507543 ggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaacccggtattc 3507642  T
Q  118 cc-ggatacgtcc-ttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    || |  ||||||| ||  ||||||||||| |||||| ||| |||||||||||    
T  3507643 cctgtgtacgtccttttgaaggagctccttgccactagagtccaagcaactt 3507694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 26361960 - 26362118
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||||||| ||||||| |||||  |  |||| ||||||| ||||| |||||||||||||||||||||||| |||| | ||||||| | ||||    
T  26361960 tttttggctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttggg 26362059  T
Q  101 aattgaacccggtattcccggatacgtccttgaaaggagctcctcgccactggagcccaa 160  Q
    |||  |||| | ||||||  || ||||||||| ||||||||| | | |||||||| ||||    
T  26362060 aatcaaacctgatattcctcga-acgtccttggaaggagctcattgtcactggagtccaa 26362118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 55069689 - 55069843
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| |  |||| |||| || ||||| |||||||||||||||||  |||||||||| | |||||||   | |||||  ||||| ||||||    
T  55069689 ggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttccctataggaatcaaacccagtattc 55069788  T
Q  118 ccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || || ||||||||||||| |||||| | | ||||||||||||| ||||||||||    
T  55069789 cctgaatacgtccttgaaaagagctcattgtcactggagcccaaacaacttggtt 55069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 77 - 160
Target Start/End: Complemental strand, 10043187 - 10043104
Alignment:
Q  77 tggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaa 160  Q
    |||||||||||||||| || ||||||| ||||||| ||||||| ||||||||||||||||||||||| | |||| ||||||||||    
T  10043187 tggccaagcattgttc-tcttgggaatcgaacccgatattccccggatacgtccttgaaaggagctcattgccagtggagcccaa 10043104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 47219256 - 47219116
Alignment:
Q  3 tttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaa 102  Q
    |||||| ||| ||| ||||||| |||||  |  ||||| |||||| ||||| || ||||||||||||||| |||| ||||||| ||||| | | ||||||    
T  47219256 tttggctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaa 47219157  T
Q  103 ttgaacccggtatt-cccggatacgtccttgaaaggagctc 142  Q
    | ||||| |||||| |||||||||||||||| || ||||||    
T  47219156 tcgaacctggtattccccggatacgtccttggaaagagctc 47219116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 69 - 171
Target Start/End: Original strand, 7612987 - 7613090
Alignment:
Q  69 atgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    |||| |||| ||||||| ||||||| ||||||||| |||||||||||||||  | |||||||||| ||||||||||| ||||||| || |||| || |||    
T  7612987 atgcgcactagccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaaggagctccttgccactgaagtccaaacagctt 7613086  T
Q  168 ggtt 171  Q
    ||||    
T  7613087 ggtt 7613090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 119
Target Start/End: Complemental strand, 8164632 - 8164549
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc 119  Q
    |||||||||||| ||||  ||||||||| |||||||| |||||||||||| ||||||| | | | |||||||||||||||||||    
T  8164632 ggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttccccttagaaattgaacccggtattccc 8164549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 45450497 - 45450609
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||| |||||| ||||||||||||| ||||| |||  ||||| ||||||  ||||||||| |||| || ||||| || |||||||||||    
T  45450497 tgcgtagaggcatgcgcactggtcaagcattgttcc-cctggaaatcaaacccagtattctacggatacgt-cttggaatgagct-cttgccactggagc 45450593  T
Q  157 ccaagcaacttggttt 172  Q
    ||||||||||||||||    
T  45450594 ccaagcaacttggttt 45450609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 8362691 - 8362524
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||  | ||||||  ||||| |||||| |  || || |||||||||||||||  ||||||||| | ||||| |  |||||    
T  8362691 tttttggcattcgcaccggtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactggg 8362592  T
Q  101 aattgaacccggtattcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||||||||||||||||||| ||    |||||  |||||| |||| || ||||||||||||||||||| ||||    
T  8362591 aattgaacccggtattccccga----tccttagaaggagttccttgctactggagcccaagcaacttagttt 8362524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 61 - 172
Target Start/End: Complemental strand, 19873420 - 19873315
Alignment:
Q  61 gtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagctcctcgccactggagcccaa 160  Q
    |||||||||||| ||||||||||||||||||||| ||||||||  |||| ||||||||| | |||||| ||| ||||||||     ||||||||||||||    
T  19873420 gtagaggcatgcgcactggccaagcattgttcct-ctgggaatcaaacctggtattccccg-tacgtcattggaaggagct----accactggagcccaa 19873327  T
Q  161 gcaacttggttt 172  Q
     |||||||||||    
T  19873326 acaacttggttt 19873315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 173
Target Start/End: Original strand, 37092565 - 37092671
Alignment:
Q  68 catgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaact 166  Q
    ||||| |||||||||| | ||||||| | ||| |||  || ||| |||||| ||| |||||||||| ||| ||||||| |||||||||||||||||||||    
T  37092565 catgcgcactggccaaacgttgttccccttggaaatctaatccgatattccacgggtacgtccttggaagaagctccttgccactggagcccaagcaact 37092664  T
Q  167 tggttta 173  Q
    |||||||    
T  37092665 tggttta 37092671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 42 - 167
Target Start/End: Original strand, 47303523 - 47303649
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaaggagc 140  Q
    |||||| ||||| || || |||||||||||  ||||| |||||  |||||||||||||||||  |||||| || || ||||||||||||||| ||  |||    
T  47303523 cgactaatccggctcatgtgtagaggcatgtgcactgaccaagtgttgttcctcctgggaatcaaacccgatattttccggatacgtccttggaaaaagc 47303622  T
Q  141 tcctcgccactggagcccaagcaactt 167  Q
    ||||  |||| ||||||||||||||||    
T  47303623 tccttaccaccggagcccaagcaactt 47303649  T

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Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 54237562 - 54237421
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| |||||||| |||||| |||||  ||||| || ||||||||| ||||| ||||| |||||  ||||||  ||||      
T  54237562 tttttggctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgttgttctccctgaa 54237463  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagct 141  Q
    ||| || |||| |||| |||||||||||||||||||| ||||    
T  54237462 aatcgaccccgatatttcccggatacgtccttgaaagaagct 54237421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 170
Target Start/End: Original strand, 35923670 - 35923786
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||| ||||||||||| |||||||||| | ||||||| |||  |||| ||||| ||||||| || | |||||||||| || |||||| | |||||| |    
T  35923670 tcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctggtattctccaggtacgtccttggaatgagctcattgccactag 35923769  T
Q  154 agcccaagcaacttggt 170  Q
    ||||||| |||||||||    
T  35923770 agcccaaacaacttggt 35923786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 110
Target Start/End: Original strand, 50405613 - 50405705
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaaccc 110  Q
    ||||||| |||||| | ||||||||||||| ||||  |||||||||||||||||| |||||| ||||| ||||| | ||| ||||| ||||||    
T  50405613 ggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaaccc 50405705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 49 - 167
Target Start/End: Original strand, 22405584 - 22405703
Alignment:
Q  49 tccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgc 147  Q
    ||||| |||||| || |||||| | || |||  |||| |||||||||||| |||| ||| |||||||| | |||||||||| |||  |||||||||| ||    
T  22405584 tccggctcgtgcataaaggcattcgcattggttaagcgttgttcctcctgagaatagaatccggtatttcacggatacgtcattggtaggagctccttgc 22405683  T
Q  148 cactggagcccaagcaactt 167  Q
    ||||||||||||| ||||||    
T  22405684 cactggagcccaaacaactt 22405703  T

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Target: chr3; HSP #61
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 36 - 115
Target Start/End: Complemental strand, 26043891 - 26043812
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtat 115  Q
    |||| ||||||| ||||| || ||||||||||||||| |||||||||||  ||||||  ||||||||| |||||||||||    
T  26043891 ggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaacccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 42 - 144
Target Start/End: Complemental strand, 53649800 - 53649697
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagc 140  Q
    |||||| ||||| || ||||||||| || || |||||||||||  ||||||  |||| |||| |||||||||||| |||| ||||||||||| |||||||    
T  53649800 cgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaacccggtattccccgaatacgtccttggaaggagc 53649701  T
Q  141 tcct 144  Q
    ||||    
T  53649700 tcct 53649697  T

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Target: chr3; HSP #63
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 34 - 174
Target Start/End: Complemental strand, 7139833 - 7139692
Alignment:
Q  34 ttggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttg 132  Q
    ||||||||||| || ||| | ||||||||||||  ||| ||||||| ||||   ||||||  |||||||| ||||||||||||||| ||||||||||||     
T  7139833 ttggtgggcgattaatccagctcgtgcgtagagatatgtacactggtcaagtgatgttccctctgggaatcgaacccggtattccctggatacgtcctta 7139734  T
Q  133 aaaggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    ||| ||| |  | ||||||| | ||||||||| ||| |||||    
T  7139733 aaatgagttttttgccactgaaacccaagcaatttgatttat 7139692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 2668175 - 2668092
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaag 84  Q
    ||||| || ||| ||||| ||||||||||||||  |||| ||||||| ||| | || ||||||||||||||| |||||||||||    
T  2668175 ttttttgctttcgcactgatttccaacccactaaaggtgagcgactaatccagctcttgcgtagaggcatgcgcactggccaag 2668092  T

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Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 172
Target Start/End: Original strand, 11025439 - 11025536
Alignment:
Q  74 cactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    |||||||||||  |||| || ||| ||||| ||||| |||||||||  |||||||||||| |||| ||||||  ||||||||||||||||||||||||||    
T  11025439 cactggccaagtgttgtccc-cctcggaatcgaacctggtattccccagatacgtccttggaagg-gctccttaccactggagcccaagcaacttggttt 11025536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 132
Target Start/End: Complemental strand, 33689048 - 33688933
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    |||||||||||||| | ||||||  |||||  | || || ||||||||||||||| |||||||||||  || |||| | | ||||||||||||| ||||     
T  33689048 ggtttccaacccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcactggccaagtgttattccccttaggaattgaacccgatattc 33688949  T
Q  117 cccggatacgtccttg 132  Q
    ||| ||||||||||||    
T  33688948 ccccgatacgtccttg 33688933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 26590313 - 26590395
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaag 136  Q
    ||||| |||||||||||||||||| |||||| ||||||| |||| |||| ||||||  |||||  ||| ||||||||||||||    
T  26590313 tcgtgtgtagaggcatgcacactgaccaagcgttgttccccctgagaatcgaacccaatattcttcgggtacgtccttgaaag 26590395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 49021196 - 49021274
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactgg 79  Q
    |||||||| ||| ||| ||||||| |||||| | |||||| |||||| ||||| || ||||||||||||||| ||||||    
T  49021196 tttttggctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgg 49021274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 19147058 - 19146978
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctg 98  Q
    ||||||| |||||| |  ||||| |||||| ||| | |||||| |||||| || |||||||||||||| ||||||||||||    
T  19147058 ggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagcgttgttcctcctg 19146978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 49 - 124
Target Start/End: Original strand, 40660368 - 40660444
Alignment:
Q  49 tccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggata 124  Q
    |||||||| ||||||||||||||| ||||| ||||   ||||||||||| ||||| ||| |||||| ||||||||||    
T  40660368 tccggttcatgcgtagaggcatgcgcactgaccaaatgttgttcctcctaggaatcgaatccggtatttcccggata 40660444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 43330760 - 43330808
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaag 84  Q
    |||||||||||| ||||| |||||||||||||||||| |||||| ||||    
T  43330760 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaag 43330808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 98
Target Start/End: Complemental strand, 7648819 - 7648757
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctg 98  Q
    |||||||||||| ||||| ||||||||||||| |||| |||||| ||| | ||||||| ||||    
T  7648819 ggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgttgttccccctg 7648757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 164
Target Start/End: Original strand, 13167497 - 13167604
Alignment:
Q  62 tagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccgga----tacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||  |||||||||||| ||||||||  ||||||| ||||||| |||| ||| ||    |||||||||| ||||||||||| ||||||  | |    
T  13167497 tagaggcatgtgcactggccaagcgttgttccttttgggaatcgaacccgatattccccagatacgtacgtccttggaaggagctccttgccactaaatc 13167596  T
Q  157 ccaagcaa 164  Q
    ||||||||    
T  13167597 ccaagcaa 13167604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 33560888 - 33560808
Alignment:
Q  87 ttgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgccactggagcccaagcaact 166  Q
    ||||||| |||||| ||  ||||||||||||||  | ||| |||||| ||||||||||| ||||||| ||||||| |||||    
T  33560888 ttgttccccctggggatcaaacccggtattccccaggtacatccttggaaggagctccttgccactgaagcccaaacaact 33560808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 19 - 119
Target Start/End: Original strand, 45402362 - 45402462
Alignment:
Q  19 gtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc 118  Q
    |||||| ||||||||  ||||  |||||| ||||| || ||||||||||||||| ||| |||| ||  |||||||  || ||||| ||||||| ||||||    
T  45402362 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaacccgatattcc 45402461  T
Q  119 c 119  Q
    |    
T  45402462 c 45402462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 85; Significance: 1e-40; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 44893305 - 44893441
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||| |||| || ||||| ||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||| ||||| |||||||||| |    
T  44893305 ggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattccccgggtacgtccttgga 44893404  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  44893405 aggagctccttgccactggagcccaaacaacttggtt 44893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 6100590 - 6100419
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||  ||||| | ||||||||  ||||  |||||| ||||| || ||||||| ||||||| |||||||||||| ||||||||||||||    
T  6100590 tttttggctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctggg 6100491  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  6100490 aatcgaacccggtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaacttggtt 6100419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 10927724 - 10927553
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||  ||||||| ||||||||  ||||  |||||| ||||| || ||||||||||||||| |||||||||||| ||||||||||| ||    
T  10927724 tttttggctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctagg 10927625  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| |||||||||||| ||||| |||||||||||||| ||||||| ||||||| ||||||||||||||||||    
T  10927624 aatcgaacccggtattccccgggtacgtccttgaaagaagctccttgccactgaagcccaagcaacttggtt 10927553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 2467110 - 2467284
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||| || ||| | | |||| |||||| ||||| || ||| ||||| ||||| |||||||||||  ||||||| |||||     
T  2467110 tttttggctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctgga 2467209  T
Q  101 aattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    ||| ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  2467210 aatcgaacccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtttat 2467284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 2964194 - 2964021
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| ||||||  |||||| |  |||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||||||| | ||    
T  2964194 tttttggctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttcctcatcgg 2964095  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||| ||||||| ||||| ||||| |||| |||||||| || |||||| ||| |||||||||||||||||    
T  2964094 aatcgaacacggtattccccgggtacgttcttggaaggagctacttgccactagagtccaagcaacttggttta 2964021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 14666099 - 14666234
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaa 135  Q
    ||||||||||| || || | |||||||||||||||| |||||||||||  ||||| | ||||||||| |||||||||||| |||||||||||||||| ||    
T  14666099 gtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttggaa 14666198  T
Q  136 ggagctcctcgccactggagcccaagcaacttggtt 171  Q
     |||||||| ||||||||||||||||||||||||||    
T  14666199 tgagctccttgccactggagcccaagcaacttggtt 14666234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 15884548 - 15884720
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||  ||| ||| ||||||| |||||| |  |||||||||||| ||||| |||||||||||||||||| |||| ||||||  ||||||| ||||||    
T  15884548 tttttggttttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttcc-cctggg 15884646  T
Q  101 aattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||| |||||||||||| ||| | |||||||||| |||||||||||  |||||||||||||| ||||||||||||    
T  15884647 aatcgaacccggtattccccaggtacgtccttggaaggagctccttaccactggagcccaatcaacttggttta 15884720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 55 - 171
Target Start/End: Original strand, 38922460 - 38922577
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactgg 153  Q
    ||||||||| |||||||| |||||||||||| |||||||  |||||||| ||||||||||||||| || |||||||||| ||||||||||| ||||||||    
T  38922460 tcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactgg 38922559  T
Q  154 agcccaagcaacttggtt 171  Q
    ||||||||||||||||||    
T  38922560 agcccaagcaacttggtt 38922577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 55 - 173
Target Start/End: Complemental strand, 17981505 - 17981386
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    ||||||||||||||||||||||||| ||||  ||||||| ||||||||| |||||||||| ||||||| ||| |||||| ||||||||||| ||||||||    
T  17981505 tcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaacccggtatttcccgggtacatccttggaaggagctccttgccactgg 17981406  T
Q  154 agcccaagcaacttggttta 173  Q
    |||||||||||||| |||||    
T  17981405 agcccaagcaacttagttta 17981386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 36 - 174
Target Start/End: Complemental strand, 24837325 - 24837186
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    ||||| |||||| ||| | |||||| |||||||||| ||||||||||||| ||||||  ||||||||| |||| |||||||||| || ||||| |||| |    
T  24837325 ggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccctgggaatcgaacacggtattccccgggtacgtacttgga 24837226  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  24837225 aggagctccttgccactggagcccaagcaacttggtttat 24837186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 13085624 - 13085471
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| ||||||| ||| ||||||| || || || ||||||||||||| |||||||||||| || | |||||||  ||| |||| |||||||||||||    
T  13085624 ggtttccgacccact-ttgatgggcgattaatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattc 13085526  T
Q  118 cc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || ||||||||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  13085525 cccggatacgtccttggaaggagctcctcgccactggagcccaaacaagttggtt 13085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 34846875 - 34846761
Alignment:
Q  57 gtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||||| ||||||||||| ||||||  | ||||||| ||||||||||||||||| |||||||||| || |||||||| |||||||||||    
T  34846875 gtgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtattcccgggtacgtccttggaatgagctccttgccactggagc 34846776  T
Q  157 ccaagcaacttggtt 171  Q
    |||| ||||||||||    
T  34846775 ccaaacaacttggtt 34846761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 177
Target Start/End: Original strand, 1013026 - 1013146
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||   ||||||||||| ||||||| ||||||||| ||||||||||||||| ||||||||||||| ||  ||||||| |||||||||||    
T  1013026 tgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctccttgccactggagc 1013125  T
Q  157 ccaagcaacttggtttataag 177  Q
    ||||||||||||||| |||||    
T  1013126 ccaagcaacttggttaataag 1013146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 18 - 171
Target Start/End: Original strand, 9860004 - 9860159
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| | |||| | |||||| |||||| || || || || ||||||||||||||||||||||||  ||||||| ||||||||| ||||||||||||     
T  9860004 ggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaacccggtattc 9860103  T
Q  117 -cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
     |||||||||||||||| ||||||||| | ||||||||| ||||| ||||||||||    
T  9860104 ccccggatacgtccttggaaggagctctttgccactggatcccaaacaacttggtt 9860159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 33401826 - 33401958
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaa 134  Q
    |||||||||||| ||||  || |||||||||||||||||||||| ||||  ||||||| ||||  ||| ||||||||||||||| || ||||||||||||    
T  33401826 ggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgtccttgaa 33401925  T
Q  135 aggagctcctcgccactggagcccaagcaactt 167  Q
    |||||||||| ||||||||||||||| ||||||    
T  33401926 aggagctccttgccactggagcccaaacaactt 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 8141163 - 8141049
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||| |||||||||||| ||||| | ||||| ||| |||||||||||| |||| ||||||||||| ||| ||||||| |||||||||||    
T  8141163 tgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaagcagctccttgccactggagc 8141064  T
Q  157 ccaagcaacttggtt 171  Q
    |||| ||||||||||    
T  8141063 ccaaacaacttggtt 8141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 36 - 172
Target Start/End: Complemental strand, 26571007 - 26570870
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaa 134  Q
    ||||| |||||| ||||| || |||||||| |||| |||||||||||||| ||||||| ||| ||||||||||||| || ||||| ||||| ||||| ||    
T  26571007 ggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgttccccctaggaattgaacccgatatttcccagatacatccttaaa 26570908  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||  |||||| |||||| |||||||| |||||||||||    
T  26570907 agtcgctccttgccactagagcccaaacaacttggttt 26570870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 45521251 - 45521116
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    |||| ||||||| ||||| || ||||||||||||||| |||||  ||||  ||||||| ||||||||| ||||||||||||||| || ||| |||||| |    
T  45521251 ggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcc-cctgggaatcgaacccggtattccccgggtacatccttgga 45521153  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    | || ||||| ||||||||||||||||||||||||||    
T  45521152 atgaactccttgccactggagcccaagcaacttggtt 45521116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 36 - 166
Target Start/End: Complemental strand, 43032984 - 43032853
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaa 134  Q
    |||||||||||| ||||| ||||| |||||||||||| |||||||||||| ||||||| ||||||||| ||| ||| || ||||| ||||| |  ||| |    
T  43032984 ggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaatccgatatttcccagatacatttttgga 43032885  T
Q  135 aggagctcctcgccactggagcccaagcaact 166  Q
    |||| ||||| ||||||||||||||| |||||    
T  43032884 aggaactccttgccactggagcccaaacaact 43032853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 42 - 171
Target Start/End: Complemental strand, 43027382 - 43027252
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagc 140  Q
    |||||| ||||| || ||||||||||||||| || ||| ||| | ||||||||||||||||| |||||| ||||| |||  |||||| ||||||| ||||    
T  43027382 cgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaacccagtattccccaaatacgttcttgaaatgagc 43027283  T
Q  141 tcctcgccactggagcccaagcaacttggtt 171  Q
    || | ||||||||||||||| ||||||||||    
T  43027282 tcattgccactggagcccaaacaacttggtt 43027252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 3418505 - 3418679
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||  ||||||||  ||||| |||||| || |  || |||||||| |||||| |||||||||||  |||||||||||       
T  3418505 ttttttgctttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaa 3418604  T
Q  101 aattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtttat 174  Q
    ||| ||||||| |||||||  |||||||||||| ||||||||||| ||||| |||| |||| |||||||||||||    
T  3418605 aatcgaacccgatattccccagatacgtccttggaaggagctccttgccacgggagtccaaacaacttggtttat 3418679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 55 - 172
Target Start/End: Complemental strand, 13359086 - 13358968
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    ||||||||||||| |||| ||||| |||||| |||||||| ||| |||| |||||||||| || ||||| || || ||| |||||||||||  ||||||     
T  13359086 tcgtgcgtagaggtatgcgcactgtccaagcgttgttccttctgagaatcgaacccggtattttccggacacatctttggaaggagctccttaccactga 13358987  T
Q  154 agcccaagcaacttggttt 172  Q
    |||||||||||||||||||    
T  13358986 agcccaagcaacttggttt 13358968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 14846636 - 14846523
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||| ||||| |||| ||||||||| |||| |||| |||||||||||| ||||| |||||||||  |||||||| || |||| ||||||    
T  14846636 tgcgtagaggcatgcgcactgaccaatcattgttcc-cctgagaatcgaacccggtattccccgggtacgtccttagaaggagcttcttgccagtggagc 14846538  T
Q  157 ccaagcaacttggtt 171  Q
    |||| ||||||||||    
T  14846537 ccaaacaacttggtt 14846523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 583895 - 583761
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaa 134  Q
    |||||||||||| ||||  || ||||||||||||||| |||||| ||||| ||||||  ||| ||||| |||||||||| ||| ||  |||||||||| |    
T  583895 ggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttc--cctaggaatcgaacccggtatttctcgagtacgtccttgga 583798  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || ||||||| |||||| |||||||| ||||||||||    
T  583797 agtagctccttgccactagagcccaaacaacttggtt 583761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 18 - 168
Target Start/End: Original strand, 4479305 - 4479455
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| |  ||||| |||||| ||| | || ||||||||||||||| |||||||||||| ||||||| ||||||||| ||| |||||||||    
T  4479305 ggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcc-cctgggaatcgaatccggtattc 4479403  T
Q  118 -ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
      | | |||||||||||||||| || || ||||||| | ||||| |||||||    
T  4479404 tacaggtacgtccttgaaaggaacttcttgccactgaaacccaaacaacttg 4479455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 36 - 167
Target Start/End: Original strand, 35496282 - 35496413
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaa 135  Q
    ||||||||| || ||| | |||| ||||||||||||| ||||| |||||  ||||| |  |||  ||||||||| | ||||||  |||||||||||||||    
T  35496282 ggtgggcgattaatccagctcgtacgtagaggcatgcgcactgaccaagtgttgtttcctctgaaaattgaacctgatattcctcgatacgtccttgaaa 35496381  T
Q  136 ggagctcctcgccactggagcccaagcaactt 167  Q
     |||||||| ||||| ||||||||||||||||    
T  35496382 tgagctccttgccaccggagcccaagcaactt 35496413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 49 - 174
Target Start/End: Original strand, 68138 - 68264
Alignment:
Q  49 tccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgc 147  Q
    ||||| ||||| ||| ||||||||| ||||||||| | |||||||||||| |||| ||||||| | ||||| ||  ||||||||| ||||||||||| ||    
T  68138 tccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaacccgatcttccccgagcacgtccttggaaggagctccttgc 68237  T
Q  148 cactggagcccaagcaacttggtttat 174  Q
    ||| ||||| ||| ||||||| |||||    
T  68238 caccggagctcaaacaacttgatttat 68264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 16894019 - 16893882
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    |||||||||| | ||||| || |||||| |||||||   ||||||||||| || |||| |||| |||| ||||||| ||||||| ||||||||| ||| |    
T  16894019 ggtgggcgacaa-tccggctcatgcgtaaaggcatgtgtactggccaagcgttattccccctgtgaatcgaacccgatattccccggatacgtcattgga 16893921  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||| |||| ||||||  ||||||||||||||||||||    
T  16893920 aggagttccttgccactatagcccaagcaacttggttta 16893882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 26 - 119
Target Start/End: Complemental strand, 6042914 - 6042821
Alignment:
Q  26 acccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc 119  Q
    |||||| | ||||||||||||| ||||| || |||||  |||||||| |||||||||||| ||||||| | ||||||| |||||||||||||||    
T  6042914 acccaccagtggtgggcgactaatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtattccc 6042821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 49 - 171
Target Start/End: Original strand, 7673697 - 7673816
Alignment:
Q  49 tccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccg-gatacgtccttgaaaggagctcctcgc 147  Q
    ||||| ||||||||||||||||||||||| ||||| | ||||||| |||   ||| ||||  | |||||||  |||||||||||| ||||||||||| ||    
T  7673697 tccggctcgtgcgtagaggcatgcacactagccaaacgttgttccccct---aatcgaacttgatattccccagatacgtccttggaaggagctccttgc 7673793  T
Q  148 cactggagcccaagcaacttggtt 171  Q
    |||||||| |||||||||||||||    
T  7673794 cactggag-ccaagcaacttggtt 7673816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 42 - 174
Target Start/End: Complemental strand, 18374087 - 18373954
Alignment:
Q  42 cgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaaaggagc 140  Q
    |||||| ||||| || ||||||||||||||| |||||| ||||| ||||||  |||| |||| ||||| |||| ||||||||||  || ||| || ||||    
T  18374087 cgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctggtatttcccggatatatctttggaatgagc 18373988  T
Q  141 tcctcgccactggagcccaagcaacttggtttat 174  Q
    |||| |||| |||||||||| |||||| ||||||    
T  18373987 tccttgccattggagcccaaacaacttagtttat 18373954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 68 - 171
Target Start/End: Complemental strand, 22810130 - 22810027
Alignment:
Q  68 catgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaact 166  Q
    ||||| ||||| |||||| ||||||| || |||||| ||||||| | ||| ||||||||||||||| ||||||||||| |||||| |||||||| |||||    
T  22810130 catgcgcactgaccaagcgttgttcc-ccagggaatcgaacccgatgttctccggatacgtccttggaaggagctccttgccactagagcccaaacaact 22810032  T
Q  167 tggtt 171  Q
    |||||    
T  22810031 tggtt 22810027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 33935762 - 33935898
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaa 134  Q
    |||| ||||||| ||||  || |||||| |||||||| |||||||||||  ||||||  ||| ||||| ||| ||||||||||  || ||| ||||| ||    
T  33935762 ggtgagcgactaatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtattccttgggtacatccttaaa 33935861  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||||| || |||||||||||| ||||||||||    
T  33935862 aggagctccttgcaactggagcccaaacaacttggtt 33935898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 172
Target Start/End: Original strand, 8997593 - 8997708
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagc 156  Q
    |||||| ||||||||  |||||| || | ||||||| | | ||||| |||| |||||||||| || || |||||||||||||| |||| ||||||||||     
T  8997593 tgcgtataggcatgcgaactggcgaaacgttgttccccttaggaatcgaacacggtattccccgaatatgtccttgaaaggagttccttgccactggagt 8997692  T
Q  157 ccaagcaacttggttt 172  Q
    ||||||||||||||||    
T  8997693 ccaagcaacttggttt 8997708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 41 - 171
Target Start/End: Complemental strand, 29933850 - 29933720
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggag 139  Q
    ||||||| ||||| || | |||||||||||| ||||||| ||||  ||||||  ||||||||| |||||| |||||| |||||||| | |||  ||||||    
T  29933850 gcgactaatccggctcatacgtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaaccc-gtattctccggatacattcttagaaggag 29933752  T
Q  140 ctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| |||||||||| |||| ||||||||||    
T  29933751 ctccttgccactggagtccaaacaacttggtt 29933720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 18 - 168
Target Start/End: Complemental strand, 38236006 - 38235855
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-tt 116  Q
    |||||||||||||| |   ||||||||||| ||| | |||||| ||||  ||||  || |||||||||||||||    |||||||| ||| |||||| ||    
T  38236006 ggtttccaacccaccaacagtgggcgactaatcccgctcgtgcatagaatcatgtgcaatggccaagcattgttttctctgggaatcgaatccggtactt 38235907  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    ||| | |||||||||| ||| || |||| |||||||||||||||||||||||    
T  38235906 cccaggtacgtccttggaagaagttccttgccactggagcccaagcaacttg 38235855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 38 - 167
Target Start/End: Original strand, 44031464 - 44031599
Alignment:
Q  38 tgggcgactagtccggttcgtgcgtagaggcatgc-----acactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtcctt 131  Q
    |||||||||| ||||| ||||||| ||||||||||     ||||||||||||| ||||||| ||||| ||| ||||||| || ||||||| ||| |||||    
T  44031464 tgggcgactaatccggctcgtgcgcagaggcatgcacactacactggccaagcgttgttccccctggaaatcgaacccgatatttcccggttacatcctt 44031563  T
Q  132 gaaaggagctcctcgccactggagcccaagcaactt 167  Q
    | |||||| |||| |||||| |||| ||| ||||||    
T  44031564 ggaaggagttccttgccactagagctcaaacaactt 44031599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 171
Target Start/End: Original strand, 10535453 - 10535566
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||| ||| ||||| |||||| |||||  |||||| ||||  |||||||||  ||||||| |||||||||||||| ||||||||||| ||||||||||     
T  10535453 tgcgtggagacatgcgcactggtcaagcggtgttcc-cctgaaaattgaaccatgtattcctcggatacgtccttggaaggagctccttgccactggagt 10535551  T
Q  157 ccaagcaacttggtt 171  Q
    |||| ||||||||||    
T  10535552 ccaaacaacttggtt 10535566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 58 - 171
Target Start/End: Complemental strand, 11785976 - 11785864
Alignment:
Q  58 tgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||||||||||||| |||| | ||| ||| ||| ||||| ||| |||||||| ||||| |||||||||| || |||||||| | |||||||||    
T  11785976 tgcgtagaggcatgcacactgcccaaacgttgctcc-ccttggaatcgaatccggtattccccgggtacgtccttggaatgagctccttg-cactggagc 11785879  T
Q  157 ccaagcaacttggtt 171  Q
    ||| |||||||||||    
T  11785878 ccatgcaacttggtt 11785864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 171
Target Start/End: Original strand, 34613831 - 34613941
Alignment:
Q  62 tagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagctcctcgccactggagcccaa 160  Q
    |||||||||||  ||||||||  | ||||||||||||||||| ||||||| |||| ||||||||||   ||| ||||||||| | |||||||||||||||    
T  34613831 tagaggcatgcgtactggccagacgttgttcctcctgggaatcgaacccgatattccccggatacggttttggaaggagctcattgccactggagcccaa 34613930  T
Q  161 gcaacttggtt 171  Q
     ||| ||||||    
T  34613931 acaatttggtt 34613941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 69 - 173
Target Start/End: Complemental strand, 6940608 - 6940503
Alignment:
Q  69 atgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaactt 167  Q
    |||| |||| ||||||| ||||||| ||||| ||| ||||||| ||||  |||||||| |||||| || ||||||||  |||||||||||||| ||||||    
T  6940608 atgcgcactagccaagcgttgttccacctggaaatcgaacccgatattttccggatacctccttggaatgagctccttaccactggagcccaaacaactt 6940509  T
Q  168 ggttta 173  Q
    ||||||    
T  6940508 ggttta 6940503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 43 - 171
Target Start/End: Original strand, 24938596 - 24938725
Alignment:
Q  43 gactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagct 141  Q
    ||||| |||||||| ||||||||||||||| || || |||||  ||||| |  || | ||| ||||| ||||||| |||| || ||||||| | ||||||    
T  24938596 gactaatccggttcatgcgtagaggcatgcgcattgaccaagtgttgtttcatctagaaatcgaacctggtattctccgggtatgtccttggagggagct 24938695  T
Q  142 cctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||||||||||| ||||||||||    
T  24938696 ccttgccactggagcccaaacaacttggtt 24938725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 37 - 173
Target Start/End: Complemental strand, 36662486 - 36662349
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc-cggatacgtcctt-gaa 134  Q
    |||| |||||| |||||||| | ||||||||||||| ||||||| ||| |||||||| ||||  ||| ||||||| |||||| || |||||||||| |||    
T  36662486 gtggacgactaatccggttcatacgtagaggcatgcgcactggctaagtattgttcc-cctgaaaatcgaacccgatattcctcgtatacgtccttggaa 36662388  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||||||||   ||||| |||| ||  |||||||||||    
T  36662387 aggagctccttctcactgaagcctaaagaacttggttta 36662349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 98
Target Start/End: Original strand, 13357965 - 13358045
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctg 98  Q
    ||||||| ||||||||  || || |||||| ||||| |||||| |||||||||||||| ||||||| | ||||||| ||||    
T  13357965 ggtttccgacccactaaagggggacgactaatccggctcgtgcatagaggcatgcacattggccaaacgttgttccccctg 13358045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 27975984 - 27975900
Alignment:
Q  26 acccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaaccc 110  Q
    ||||||||  ||||||||| || ||||| ||  ||||||||||||||||||||  ||||  |||||||| |||||||| ||||||    
T  27975984 acccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaaccc 27975900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 28033253 - 28033169
Alignment:
Q  26 acccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaaccc 110  Q
    ||||||||  ||||||||| || ||||| ||  ||||||||||||||||||||  ||||  |||||||| |||||||| ||||||    
T  28033253 acccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaaccc 28033169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 121 - 172
Target Start/End: Original strand, 9395931 - 9395982
Alignment:
Q  121 gatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttt 172  Q
    ||||| ||||||||| |||||| | |||||||||| ||||||||||||||||    
T  9395931 gatacatccttgaaatgagctcattgccactggagtccaagcaacttggttt 9395982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 57 - 171
Target Start/End: Complemental strand, 17845793 - 17845680
Alignment:
Q  57 gtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggag 155  Q
    ||||||||||| |||  |||| ||||||  ||||||| |||||||||  |||| | ||||||| || ||| |||||| ||||||||| | ||||||||||    
T  17845793 gtgcgtagaggaatgtgcactagccaagtgttgttcc-cctgggaatcaaaccag-tattccccgagtacatccttggaaggagctcattgccactggag 17845696  T
Q  156 cccaagcaacttggtt 171  Q
    ||||| ||||||||||    
T  17845695 cccaaacaacttggtt 17845680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 103
Target Start/End: Original strand, 8586979 - 8587033
Alignment:
Q  49 tccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaat 103  Q
    ||||| || |||||||||| |||| |||||||||||| ||||||| |||||||||    
T  8586979 tccggctcatgcgtagaggtatgcgcactggccaagcgttgttccccctgggaat 8587033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 8803172 - 8803106
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagagg 67  Q
    |||||||| ||| ||  ||||||| |||||| |||| |||||||||| ||||| |||||||||||||    
T  8803172 tttttggctttcgcatcggtttccgacccaccattgatgggcgactaatccggctcgtgcgtagagg 8803106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 168
Target Start/End: Original strand, 34710573 - 34710727
Alignment:
Q  15 actggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta 114  Q
    |||||||| | |||||| | || ||| |||||||||||  | ||| ||| |||||||| |||| ||||||  ||||| | ||||||||| ||| ||||||    
T  34710573 actggttttcgacccaccaatgatggacgactagtccgacttgtgtgtaaaggcatgcgcactagccaagtgttgtttcccctgggaatcgaatccggta 34710672  T
Q  115 -ttcccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
     || |||  |||||||||| ||| | || || ||||| ||||||||| |||||||    
T  34710673 ttttccgagtacgtccttggaagaaacttcttgccaccggagcccaaacaacttg 34710727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 36 - 93
Target Start/End: Complemental strand, 22958853 - 22958796
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcc 93  Q
    ||||| |||||| ||||| || ||| ||||| ||||||||||| ||||||||||||||    
T  22958853 ggtggacgactaatccggctcatgcatagagacatgcacactgaccaagcattgttcc 22958796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 173
Target Start/End: Complemental strand, 30903393 - 30903281
Alignment:
Q  61 gtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagccca 159  Q
    |||| ||||||| |||||| ||||||||||| | ||||  ||| ||| ||||||||||| || |||||| ||| ||| |||||||  | |||||||| ||    
T  30903393 gtagcggcatgcgcactggtcaagcattgtttc-cctgaaaatcgaatccggtattccccgaatacgtcattggaagaagctccttactactggagcgca 30903295  T
Q  160 agcaacttggttta 173  Q
    | ||||||||||||    
T  30903294 aacaacttggttta 30903281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 12752 - 12614
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||  |||| |||||||||||| |||||  ||||||||| |    
T  12752 ggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaacccggtattccccgggcacgtccttgga 12653  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||||| || |||||| ||| |||||||||||||||||    
T  12652 aggagcttcttgccactagagtccaagcaacttggttta 12614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 69; Significance: 4e-31; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 36 - 173
Target Start/End: Complemental strand, 68596 - 68461
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||||||||||| ||||| |||||||||||||||||| |||   |||||| ||||||| ||||||||| ||||||| |||| ||||| |||||||||| |    
T  68596 ggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaacccgatatttcccgggtacgtccttgga 68500  T
Q  135 aggagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||||||||| |||||| |||||||| ||||||||||||    
T  68499 aggagctccttgccactagagcccaaacaacttggttta 68461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 38 - 171
Target Start/End: Complemental strand, 41124 - 40990
Alignment:
Q  38 tgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaag 136  Q
    |||||||||| ||||| |||||||||||||||||||||||| |||||  ||||||| | || |||| ||||||| ||||||| || ||||||| || |||    
T  41124 tgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgatattccctgagtacgtccatggaag 41025  T
Q  137 gagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||| ||||||||||||||| ||||||||||    
T  41024 gagctccttgccactggagcccaaacaacttggtt 40990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 67; Significance: 6e-30; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 38 - 171
Target Start/End: Original strand, 271103 - 271237
Alignment:
Q  38 tgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaag 136  Q
    ||||||||||  |||| |||||||||||| ||||| ||||| |||||| ||||||| ||||||||| ||||||| ||||| |||| |||||||||| |||    
T  271103 tgggcgactaacccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattctccgggtacgtccttggaag 271202  T
Q  137 gagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||| |||||  |||||||||||||||||||    
T  271203 gagctccttgccaccagagcccaagcaacttggtt 271237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 41 - 172
Target Start/End: Original strand, 250057 - 250177
Alignment:
Q  41 gcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagc 140  Q
    ||||||| ||||| |||||||||||||||||| |||||||||| ||| ||| |  |||||||||            ||||| |||||||||| || ||||    
T  250057 gcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacatggtttccactgggaattc-----------cccgggtacgtccttggaatgagc 250145  T
Q  141 tcctcgccactggagcccaagcaacttggttt 172  Q
    |||| |||||||||||||||||||||||||||    
T  250146 tccttgccactggagcccaagcaacttggttt 250177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 36 - 83
Target Start/End: Complemental strand, 219451 - 219404
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaa 83  Q
    ||||| |||||| ||| |||||||||||||||||||| ||||||||||    
T  219451 ggtggacgactaatccagttcgtgcgtagaggcatgcgcactggccaa 219404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0170 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 173
Target Start/End: Complemental strand, 9949 - 9789
Alignment:
Q  14 cactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggt 113  Q
    ||||||||||  |||||| |  ||||| |||||| ||||| |||||||||||||||||| |||||||||||| ||||||| ||||| ||| ||| |||||    
T  9949 cactggtttctgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggt 9850  T
Q  114 attcc-cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    ||||| | ||||| |||||| ||||||||||| | |||||||| | || ||||||||||||    
T  9849 attcctcagatacatccttggaaggagctccttgtcactggagtcaaaacaacttggttta 9789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 4e-28; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 687 - 516
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| |  |||| ||||||| || || || | |||||||||||||||||||  ||||  ||||||| |||| |    
T  687 ttttttgctttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcg 588  T
Q  101 aattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||| ||||||||||||||| || |||||||||| ||||||||||| |||||| |||||||||||||||||||    
T  587 aatcgaacccggtattccccgggtacgtccttggaaggagctccttgccactagagcccaagcaacttggtt 516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 319539 - 319367
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| |||||||  ||||| |  ||||| |||||| ||| | || ||| |||||| |||| |||||||||||| ||||||| ||| |     
T  319539 tttttggctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccctaga 319440  T
Q  101 aattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    |||  |||||||||||||| ||||||||||||| ||||||||||| |||||||||| || ||||||||||||||    
T  319439 aatcaaacccggtattccccggatacgtccttggaaggagctccttgccactggag-cctagcaacttggttta 319367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 74 - 171
Target Start/End: Original strand, 412091 - 412189
Alignment:
Q  74 cactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||| |||||| ||||||| |||| |||| |||| |||||||||| ||||||||||||| ||||||||| ||||||||| ||||||||||||||||||    
T  412091 cactgaccaagcgttgttccccctgtgaatcgaactcggtattccccggatacgtccttggaaggagctcatcgccactgaagcccaagcaacttggtt 412189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 164
Target Start/End: Complemental strand, 139491 - 139384
Alignment:
Q  62 tagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccgga----tacgtccttgaaaggagctcctcgccactggagc 156  Q
    ||||||||||  |||||||||||| ||||||||  ||||||| ||||||| |||| ||| ||    |||||||||| ||||||||||| ||||||  | |    
T  139491 tagaggcatgtgcactggccaagcgttgttccttttgggaatcgaacccgatattccccagatacgtacgtccttggaaggagctccttgccactaaatc 139392  T
Q  157 ccaagcaa 164  Q
    ||||||||    
T  139391 ccaagcaa 139384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 37 - 171
Target Start/End: Complemental strand, 26264 - 26129
Alignment:
Q  37 gtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaa 135  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||| ||||||| ||||| ||| |||||| ||||| ||| | || ||||||  ||    
T  26264 gtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaacccagtattccccaggtatgtccttagaa 26165  T
Q  136 ggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||| | || |||||| ||| |||||||||||||||    
T  26164 ggagtttcttgccactagagtccaagcaacttggtt 26129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 19 - 171
Target Start/End: Original strand, 8711 - 8873
Alignment:
Q  19 gtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcc 118  Q
    |||||| |||||| |  ||||| |||||| ||| | || |||||||||||| || |||||||||||| ||||||| ||||||||| ||||||||||||||    
T  8711 gtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaacccggtattcc 8810  T
Q  119 ----------cggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
              | |||||||||||| ||||||||||| ||||||||||||||| ||||||||||    
T  8811 tctgatacgtctgatacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 8873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 18 - 171
Target Start/End: Complemental strand, 6072 - 5919
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||| | |||||| |||||| | ||  || ||||||||||||||  |||||||||||| |||| || ||||| ||| |||||| ||||||    
T  6072 ggtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttgtccc-cctggaaatcgaacccagtattc 5974  T
Q  118 cc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || || |||| ||||||||||||||||| |||||| || ||||||||||||||||    
T  5973 cccgggtacgcccttgaaaggagctccttgccactagaacccaagcaacttggtt 5919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 75 - 171
Target Start/End: Complemental strand, 9479 - 9382
Alignment:
Q  75 actggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||||  | |||||||||||||||||||||| |  || ||||||||||||||||||||    
T  9479 actggccaagcgttgttccccctgggaatcgaacccggtattccccaagtacgtccttgaaaggagctccttgttaccggagcccaagcaacttggtt 9382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 166
Target Start/End: Original strand, 42841 - 42990
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt- 116  Q
    ||||||| |||||| |  |||||||||||| ||||| || || |||||||||||| ||||| |||||||||||||  ||| ||||| ||||||| ||||     
T  42841 ggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaacccgatattc 42940  T
Q  117 cccggatacgtccttgaaaggagctcctcgccactggagcccaagcaact 166  Q
    ||| | ||| | |||| ||| ||||| | |||||||||| ||||||||||    
T  42941 cccaggtacattcttggaagtagctcgttgccactggagtccaagcaact 42990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 6972 - 6854
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    ||||| || ||| ||| ||||||| |||||| |  |||| ||||||| ||||| || ||||||||||||||| |||||||||||  ||||||| ||||||    
T  6972 ttttttgctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggg 6873  T
Q  101 aattgaacccggtattccc 119  Q
    ||| |||||||||||||||    
T  6872 aatcgaacccggtattccc 6854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 36 - 171
Target Start/End: Complemental strand, 12655 - 12521
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggta-ttcccggatacgtccttgaa 134  Q
    |||||||||||| ||||  || ||||||||||||||| |||||| ||||| ||||||  ||| ||||| |||||||||| ||| ||  |||||||||| |    
T  12655 ggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttc--cctaggaatcgaacccggtatttctcgagtacgtccttgga 12558  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    || ||||||| |||||| |||||||| ||||||||||    
T  12557 agtagctccttgccactagagcccaaacaacttggtt 12521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 47; Significance: 5e-18; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 155703 - 155805
Alignment:
Q  1 tttttggcgttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctggg 100  Q
    |||||||| ||| ||| || |||| |||||| |  |||||||||||| ||||| |||||||||||||||||| |||| ||||||| ||||||| ||||||    
T  155703 tttttggctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccctggg 155802  T
Q  101 aat 103  Q
    |||    
T  155803 aat 155805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 36 - 171
Target Start/End: Original strand, 25811 - 25947
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccgga-tacgtccttgaa 134  Q
    |||||| ||||| || |||||  |||||||| ||||| |||||||||||| ||||||  ||| ||||| |||||  |||||||| || ||||| |||| |    
T  25811 ggtgggtgactaatctggttcacgcgtagagtcatgcgcactggccaagcgttgttctccctaggaatcgaaccttgtattccccgagtacgtacttgga 25910  T
Q  135 aggagctcctcgccactggagcccaagcaacttggtt 171  Q
    |||||||| | || |||||||||||| ||||||||||    
T  25911 aggagctctttgctactggagcccaaacaacttggtt 25947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 18695 - 18586
Alignment:
Q  55 tcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactgg 153  Q
    |||||||||||| ||||  |||||||||||| ||||||| ||| ||||| ||||||||| |||  ||| ||| |||||| ||||||||||| ||||||||    
T  18695 tcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggtgttcttcgggtacatccttggaaggagctccttgccactgg 18596  T
Q  154 agcccaagca 163  Q
    || |||||||    
T  18595 agtccaagca 18586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 64 - 144
Target Start/End: Complemental strand, 72686 - 72606
Alignment:
Q  64 gaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattcccggatacgtccttgaaaggagctcct 144  Q
    ||||||||| |||||| ||||| ||||||| | ||| ||| ||||||||||||||| |||||||||||| |||||||||||    
T  72686 gaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggtattccctgatacgtccttggaaggagctcct 72606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 165
Target Start/End: Original strand, 95007 - 95136
Alignment:
Q  35 tggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattccc-ggatacgtccttga 133  Q
    ||||||||||||| ||||| || |||||| |||||||| |||||| ||| | |||||  |||| | ||| ||||| ||||||||| |||||| | ||||     
T  95007 tggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgtt--tcctagaaatcgaacctggtattccccggatactttcttgg 95104  T
Q  134 aaggagctcctcgccactggagcccaagcaac 165  Q
    ||||||||||| |||| |||||||||||||||    
T  95105 aaggagctccttgccattggagcccaagcaac 95136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 36 - 132
Target Start/End: Original strand, 7862 - 7959
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttg 132  Q
    |||||||||||| ||| | |  ||||||||||||||| |||||||||||  || |||| | |||||||  ||||||||||| ||||| ||||||||||    
T  7862 ggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaagtgtttttccccttgggaatcaaacccggtattccccgggtacgtccttg 7959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0316 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 36 - 170
Target Start/End: Original strand, 1641 - 1776
Alignment:
Q  36 ggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaa 134  Q
    |||||||||||| |  || || ||||||||||||||| ||||||| || | ||||||| ||||| ||| ||||| |||||| ||| |  ||||| ||| |    
T  1641 ggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaacctggtattccccaggcacgtcattgga 1740  T
Q  135 aggagctcctcgccactggagcccaagcaacttggt 170  Q
    |||||||||| |||||| ||| ||||||||||||||    
T  1741 aggagctccttgccacttgagtccaagcaacttggt 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 61 - 141
Target Start/End: Complemental strand, 8231 - 8151
Alignment:
Q  61 gtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtatt-cccggatacgtccttgaaaggagct 141  Q
    |||||||||||| |||||||||||| ||||||| | ||||||| |||||||||||| ||||| |||||||||| ||||||||    
T  8231 gtagaggcatgcgcactggccaagcgttgttcc-cttgggaatcgaacccggtattccccgggtacgtccttggaaggagct 8151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 16979 - 16852
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    |||||||||||||| |  |||| ||||||| || || |||||||||||| ||| | ||||| |||||| ||||| | |||| |||||||||||  |||||    
T  16979 ggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtttcccctgagaattgaacccaatattc 16880  T
Q  118 cc-ggatacgtccttgaaaggagctcct 144  Q
    || | || | |||||| |||||||||||    
T  16879 cctgaatgcatccttggaaggagctcct 16852  T

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Target: scaffold0332 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 168
Target Start/End: Complemental strand, 15354 - 15280
Alignment:
Q  95 cctgggaattgaacccggtattccc-ggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttg 168  Q
    ||||| ||| ||||||||||||||| || ||| |||||| ||||||||||| |||||| |||||||| |||||||    
T  15354 cctggaaatcgaacccggtattccccgggtacttccttgtaaggagctccttgccactagagcccaaacaacttg 15280  T

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Target: scaffold0548 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0548
Description:

Target: scaffold0548; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 4646 - 4731
Alignment:
Q  87 ttgttcctcctgggaattgaacccggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggtt 171  Q
    ||||||||||||| |||||||||||||||||  ||| ||||| |||||||| ||||| | ||||  || |||||| ||||||||||    
T  4646 ttgttcctcctggaaattgaacccggtattcgacgggtacgttcttgaaagtagctctttgccatgggtgcccaaacaacttggtt 4731  T

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Target: scaffold0024 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 103
Target Start/End: Complemental strand, 149477 - 149400
Alignment:
Q  26 acccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaat 103  Q
    |||||| ||||||||||||||| ||    |||| |||||||||||||||||||| ||||| ||||||| |||| ||||    
T  149477 acccaccattggtgggcgactaatctacctcgtacgtagaggcatgcacactggtcaagcgttgttccccctgagaat 149400  T

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Target: scaffold0116 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 18 - 144
Target Start/End: Complemental strand, 17490 - 17363
Alignment:
Q  18 ggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacccggtattc 117  Q
    ||||||| |||||  | ||||||||||||| ||||| ||||| ||||| |||||| |||||| |||||||| || | |||| |||| ||| ||| || ||    
T  17490 ggtttccgacccatcaatggtgggcgactaatccggctcgtgtgtagaagcatgcgcactggtcaagcattttttcccctgagaatcgaatccgataatc 17391  T
Q  118 c-cggatacgtccttgaaaggagctcct 144  Q
    | ||||| |||| || ||||||| ||||    
T  17390 ctcggatccgtctttaaaaggagttcct 17363  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 173
Target Start/End: Complemental strand, 186625 - 186462
Alignment:
Q  10 ttcacactggtttccaacccactattggtgggcgactagtccggttcgtgcgtagaggcatgcacactggccaagcattgttcctcctgggaattgaacc 109  Q
    ||||||| ||||||| ||||||||  | ||  |||||| ||||| |||||||||||||||||  ||||| |||| |||| || ||||  | ||| |||||    
T  186625 ttcacaccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgaccaaacattatt-ctccctgaaatcgaacc 186527  T
Q  110 cggtattc-ccggatacgtccttgaaaggagctcctcgccactggagcccaagcaacttggttta 173  Q
    || ||||| ||  |||| |||||  |||| |||||| |||||| |||| ||| ||||||| ||||    
T  186526 cgatattctccaaatacatccttagaaggtgctccttgccactagagctcaaccaacttgattta 186462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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