View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6711_low_24 (Length: 240)

Name: NF6711_low_24
Description: NF6711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6711_low_24
NF6711_low_24
[»] chr7 (63 HSPs)
chr7 (13-240)||(39123854-39124081)
chr7 (62-226)||(40463855-40464013)
chr7 (64-225)||(47716438-47716596)
chr7 (63-226)||(42805502-42805662)
chr7 (62-226)||(21172007-21172164)
chr7 (63-226)||(43557450-43557611)
chr7 (63-226)||(32758239-32758395)
chr7 (63-222)||(42391099-42391251)
chr7 (64-226)||(10693073-10693228)
chr7 (75-226)||(2541030-2541177)
chr7 (63-237)||(19265782-19265949)
chr7 (76-226)||(33871922-33872066)
chr7 (75-226)||(22698978-22699127)
chr7 (63-226)||(27629612-27629770)
chr7 (63-226)||(42798647-42798805)
chr7 (63-226)||(34626207-34626364)
chr7 (64-226)||(48735122-48735278)
chr7 (65-226)||(11617589-11617745)
chr7 (63-152)||(27889315-27889402)
chr7 (83-237)||(13805069-13805217)
chr7 (83-237)||(28362164-28362313)
chr7 (63-198)||(7879644-7879774)
chr7 (102-226)||(46354172-46354293)
chr7 (79-237)||(3469190-3469347)
chr7 (65-226)||(29907395-29907552)
chr7 (77-198)||(18512466-18512581)
chr7 (75-226)||(35334827-35334971)
chr7 (65-226)||(16341256-16341413)
chr7 (65-218)||(18747472-18747621)
chr7 (63-226)||(19426889-19427046)
chr7 (75-226)||(47077866-47078010)
chr7 (64-237)||(23419674-23419842)
chr7 (63-221)||(32233134-32233286)
chr7 (76-151)||(45018935-45019012)
chr7 (84-173)||(38604558-38604641)
chr7 (84-224)||(28078152-28078286)
chr7 (75-226)||(14732832-14732979)
chr7 (85-226)||(19266428-19266564)
chr7 (76-226)||(42476851-42476994)
chr7 (153-226)||(42495919-42495992)
chr7 (63-127)||(13792149-13792213)
chr7 (75-151)||(21566485-21566560)
chr7 (62-149)||(31591107-31591192)
chr7 (89-145)||(33500569-33500625)
chr7 (62-173)||(35787267-35787372)
chr7 (64-149)||(23231609-23231692)
chr7 (94-226)||(14099036-14099163)
chr7 (94-226)||(14409053-14409180)
chr7 (153-226)||(18327012-18327085)
chr7 (162-226)||(7193063-7193127)
chr7 (89-237)||(7644923-7645066)
chr7 (65-225)||(11741774-11741927)
chr7 (82-237)||(48123502-48123652)
chr7 (75-213)||(38262207-38262340)
chr7 (64-226)||(6736868-6737022)
chr7 (84-198)||(35203445-35203556)
chr7 (94-127)||(1408529-1408562)
chr7 (62-107)||(25434112-25434157)
chr7 (111-226)||(5180202-5180314)
chr7 (76-115)||(42495874-42495913)
chr7 (160-226)||(7794597-7794663)
chr7 (153-226)||(44123705-44123778)
chr7 (63-111)||(36602535-36602583)
[»] chr2 (61 HSPs)
chr2 (64-237)||(10543664-10543835)
chr2 (63-226)||(24200622-24200782)
chr2 (64-226)||(14530296-14530455)
chr2 (60-231)||(5841001-5841169)
chr2 (62-226)||(8455314-8455473)
chr2 (61-226)||(9671158-9671317)
chr2 (95-226)||(12023950-12024075)
chr2 (63-226)||(25249737-25249894)
chr2 (63-226)||(17896237-17896396)
chr2 (62-224)||(21779259-21779414)
chr2 (63-226)||(21377073-21377230)
chr2 (63-213)||(14444720-14444864)
chr2 (63-213)||(10546153-10546299)
chr2 (76-226)||(7214512-7214659)
chr2 (63-226)||(17667980-17668138)
chr2 (64-226)||(25079717-25079875)
chr2 (64-226)||(23397744-23397899)
chr2 (62-226)||(11514414-11514572)
chr2 (63-188)||(36871509-36871627)
chr2 (64-226)||(14544041-14544201)
chr2 (63-226)||(17623542-17623700)
chr2 (95-226)||(22371035-22371158)
chr2 (67-237)||(4516354-4516519)
chr2 (62-237)||(44643489-44643660)
chr2 (62-137)||(23488545-23488620)
chr2 (84-226)||(99285-99420)
chr2 (84-226)||(31158459-31158598)
chr2 (64-149)||(40762234-40762317)
chr2 (64-237)||(17380238-17380404)
chr2 (126-226)||(29419945-29420046)
chr2 (101-226)||(5450263-5450384)
chr2 (75-226)||(24859999-24860143)
chr2 (75-219)||(25641487-25641625)
chr2 (65-125)||(40579750-40579810)
chr2 (76-215)||(19614981-19615116)
chr2 (63-226)||(27573599-27573756)
chr2 (83-237)||(32781307-32781456)
chr2 (62-226)||(39914304-39914463)
chr2 (67-226)||(45235820-45235975)
chr2 (63-149)||(15296405-15296490)
chr2 (83-226)||(33795263-33795401)
chr2 (62-124)||(34080176-34080238)
chr2 (78-124)||(34766330-34766376)
chr2 (76-224)||(19977726-19977869)
chr2 (77-149)||(24890463-24890533)
chr2 (88-149)||(44449407-44449467)
chr2 (153-226)||(44604832-44604905)
chr2 (84-144)||(19185763-19185823)
chr2 (76-119)||(8575975-8576018)
chr2 (66-125)||(41409936-41409995)
chr2 (64-118)||(3633708-3633762)
chr2 (62-112)||(22371199-22371249)
chr2 (64-149)||(25632561-25632644)
chr2 (84-125)||(24059016-24059057)
chr2 (162-226)||(17705473-17705537)
chr2 (75-127)||(26684631-26684683)
chr2 (75-112)||(124925-124962)
chr2 (102-226)||(23145736-23145855)
chr2 (102-226)||(23557526-23557645)
chr2 (63-111)||(760066-760114)
chr2 (63-111)||(23052964-23053012)
[»] chr3 (62 HSPs)
chr3 (62-225)||(13628788-13628948)
chr3 (61-226)||(29366717-29366879)
chr3 (63-226)||(26869707-26869864)
chr3 (84-226)||(46421055-46421194)
chr3 (63-226)||(13730601-13730761)
chr3 (84-226)||(8247707-8247846)
chr3 (65-237)||(22609755-22609921)
chr3 (63-226)||(40272811-40272969)
chr3 (63-226)||(34420642-34420801)
chr3 (63-225)||(5173718-5173876)
chr3 (62-226)||(16735441-16735599)
chr3 (64-226)||(39203516-39203671)
chr3 (65-226)||(22122918-22123072)
chr3 (63-218)||(516417-516570)
chr3 (66-237)||(26573116-26573282)
chr3 (63-226)||(1217090-1217246)
chr3 (76-198)||(10795435-10795554)
chr3 (63-226)||(53996564-53996723)
chr3 (63-226)||(25944469-25944628)
chr3 (64-149)||(45786214-45786299)
chr3 (74-226)||(6411832-6411978)
chr3 (63-149)||(54484765-54484849)
chr3 (84-226)||(9607203-9607342)
chr3 (66-149)||(353351-353434)
chr3 (75-190)||(14986993-14987105)
chr3 (63-149)||(34771363-34771447)
chr3 (63-226)||(52926218-52926367)
chr3 (135-226)||(10870021-10870108)
chr3 (83-224)||(30928166-30928302)
chr3 (65-215)||(45139479-45139624)
chr3 (63-149)||(49013472-49013558)
chr3 (64-197)||(31592878-31593004)
chr3 (75-226)||(7696903-7697042)
chr3 (63-149)||(15797294-15797378)
chr3 (61-147)||(25517167-25517251)
chr3 (61-226)||(12914032-12914192)
chr3 (84-215)||(33926094-33926220)
chr3 (95-173)||(47624095-47624167)
chr3 (63-149)||(54374344-54374429)
chr3 (75-144)||(829453-829521)
chr3 (63-127)||(24851300-24851364)
chr3 (75-237)||(45948849-45949009)
chr3 (128-237)||(45620890-45620997)
chr3 (62-124)||(30452892-30452954)
chr3 (62-119)||(10484614-10484671)
chr3 (63-128)||(44403554-44403619)
chr3 (68-145)||(55401254-55401330)
chr3 (77-223)||(7942993-7943134)
chr3 (85-219)||(12525414-12525543)
chr3 (62-128)||(40968611-40968677)
chr3 (153-226)||(53062038-53062112)
chr3 (114-226)||(4495714-4495821)
chr3 (63-112)||(47624208-47624257)
chr3 (63-124)||(50624952-50625013)
chr3 (62-117)||(45416932-45416986)
chr3 (84-149)||(9276338-9276400)
chr3 (85-127)||(46169988-46170030)
chr3 (61-107)||(54032568-54032614)
chr3 (160-237)||(35417905-35417982)
chr3 (63-107)||(4495675-4495719)
chr3 (67-127)||(35417998-35418058)
chr3 (63-107)||(43956471-43956515)
[»] chr5 (59 HSPs)
chr5 (62-226)||(38879559-38879720)
chr5 (63-226)||(43334180-43334340)
chr5 (84-226)||(27328730-27328869)
chr5 (62-226)||(41014297-41014455)
chr5 (62-226)||(4619102-4619263)
chr5 (63-226)||(24448868-24449026)
chr5 (61-217)||(32703411-32703560)
chr5 (63-226)||(8169983-8170139)
chr5 (63-237)||(19142942-19143110)
chr5 (63-226)||(35710291-35710447)
chr5 (64-144)||(12575660-12575739)
chr5 (75-237)||(43574564-43574730)
chr5 (64-195)||(13801767-13801895)
chr5 (75-237)||(39301090-39301247)
chr5 (78-226)||(2838756-2838899)
chr5 (64-173)||(7097760-7097863)
chr5 (62-127)||(16957386-16957451)
chr5 (75-135)||(25622524-25622584)
chr5 (62-226)||(208925-209084)
chr5 (62-149)||(29334447-29334533)
chr5 (62-229)||(22861667-22861826)
chr5 (65-137)||(12006329-12006401)
chr5 (65-149)||(20135656-20135740)
chr5 (84-226)||(22600432-22600569)
chr5 (62-124)||(3771414-3771476)
chr5 (75-189)||(7368413-7368520)
chr5 (63-149)||(12477119-12477204)
chr5 (64-149)||(34154814-34154897)
chr5 (84-137)||(10306494-10306546)
chr5 (67-128)||(21784335-21784396)
chr5 (161-226)||(37024646-37024711)
chr5 (64-226)||(1565409-1565566)
chr5 (75-149)||(16880658-16880730)
chr5 (63-226)||(28516432-28516591)
chr5 (75-220)||(1850624-1850763)
chr5 (63-128)||(19093884-19093949)
chr5 (160-237)||(23974747-23974824)
chr5 (63-123)||(16028623-16028683)
chr5 (64-123)||(30877564-30877623)
chr5 (61-124)||(39801591-39801654)
chr5 (63-149)||(11657698-11657783)
chr5 (63-120)||(10943844-10943900)
chr5 (86-127)||(21542489-21542530)
chr5 (62-115)||(32354211-32354264)
chr5 (112-219)||(22907913-22908014)
chr5 (70-128)||(4654421-4654479)
chr5 (160-226)||(22187263-22187329)
chr5 (66-115)||(13774949-13774998)
chr5 (63-124)||(24903695-24903756)
chr5 (202-231)||(28208240-28208269)
chr5 (68-137)||(39079755-39079823)
chr5 (75-149)||(42924841-42924917)
chr5 (177-237)||(10634254-10634314)
chr5 (202-234)||(12622192-12622224)
chr5 (62-137)||(24313570-24313645)
chr5 (62-137)||(24355907-24355982)
chr5 (75-127)||(30006397-30006449)
chr5 (160-224)||(34074653-34074717)
chr5 (185-237)||(39079882-39079934)
[»] chr6 (36 HSPs)
chr6 (63-221)||(29355854-29356009)
chr6 (63-226)||(12221913-12222074)
chr6 (63-226)||(9161101-9161260)
chr6 (62-226)||(1354755-1354912)
chr6 (63-226)||(1346942-1347098)
chr6 (63-226)||(2166409-2166569)
chr6 (63-226)||(2178042-2178202)
chr6 (62-145)||(12885967-12886050)
chr6 (63-144)||(12892064-12892145)
chr6 (67-237)||(13904984-13905147)
chr6 (64-149)||(7947371-7947455)
chr6 (75-226)||(3815088-3815234)
chr6 (63-126)||(6808468-6808531)
chr6 (62-125)||(23930125-23930188)
chr6 (75-137)||(3116140-3116202)
chr6 (102-226)||(6024211-6024332)
chr6 (64-124)||(10734905-10734965)
chr6 (63-127)||(13267797-13267861)
chr6 (64-212)||(17432332-17432483)
chr6 (63-149)||(26097210-26097294)
chr6 (64-124)||(11395836-11395895)
chr6 (86-226)||(14553490-14553626)
chr6 (84-127)||(24097649-24097692)
chr6 (94-149)||(24734694-24734749)
chr6 (63-149)||(25557775-25557859)
chr6 (160-226)||(8409221-8409287)
chr6 (75-137)||(14975101-14975163)
chr6 (160-226)||(14975171-14975237)
chr6 (66-226)||(15866041-15866194)
chr6 (160-229)||(12063442-12063511)
chr6 (84-127)||(32579497-32579540)
chr6 (64-226)||(12889404-12889562)
chr6 (176-226)||(33922935-33922985)
chr6 (108-149)||(2755466-2755507)
chr6 (64-143)||(383760-383837)
chr6 (202-237)||(19649300-19649336)
[»] chr8 (54 HSPs)
chr8 (64-226)||(13160680-13160836)
chr8 (62-226)||(39460992-39461153)
chr8 (75-226)||(21070708-21070859)
chr8 (75-226)||(20284080-20284230)
chr8 (62-226)||(36720774-36720933)
chr8 (63-226)||(28817625-28817783)
chr8 (63-226)||(35261657-35261815)
chr8 (75-226)||(12670261-12670405)
chr8 (65-226)||(45071243-45071398)
chr8 (75-226)||(7136538-7136686)
chr8 (63-226)||(30454096-30454252)
chr8 (66-237)||(44781506-44781674)
chr8 (83-226)||(24365078-24365217)
chr8 (63-226)||(6760800-6760960)
chr8 (75-224)||(18164771-18164914)
chr8 (75-237)||(29521696-29521854)
chr8 (64-226)||(17823554-17823711)
chr8 (62-226)||(26954110-26954272)
chr8 (62-226)||(44530127-44530286)
chr8 (63-186)||(20869941-20870061)
chr8 (63-198)||(5135289-5135418)
chr8 (87-226)||(20869523-20869653)
chr8 (76-226)||(2626497-2626645)
chr8 (63-226)||(25250500-25250660)
chr8 (65-237)||(42083699-42083867)
chr8 (84-226)||(24245429-24245564)
chr8 (66-149)||(29877146-29877227)
chr8 (62-226)||(12625867-12626027)
chr8 (153-226)||(28407394-28407467)
chr8 (63-226)||(8897763-8897921)
chr8 (77-149)||(17250888-17250960)
chr8 (75-145)||(16225075-16225145)
chr8 (75-144)||(16013511-16013580)
chr8 (63-120)||(40444845-40444902)
chr8 (63-127)||(26102589-26102653)
chr8 (62-222)||(31457155-31457309)
chr8 (75-149)||(5689683-5689755)
chr8 (64-127)||(28407475-28407538)
chr8 (75-124)||(27507985-27508034)
chr8 (108-149)||(43942376-43942417)
chr8 (63-127)||(35107310-35107374)
chr8 (75-149)||(8483949-8484021)
chr8 (94-221)||(11748282-11748406)
chr8 (105-218)||(23000260-23000365)
chr8 (63-113)||(27468091-27468141)
chr8 (75-149)||(44742529-44742602)
chr8 (77-149)||(19729392-19729462)
chr8 (101-225)||(35105902-35106022)
chr8 (75-149)||(26457781-26457851)
chr8 (99-237)||(14018003-14018137)
chr8 (78-131)||(18595906-18595959)
chr8 (160-225)||(30962864-30962929)
chr8 (75-198)||(389649-389769)
chr8 (65-125)||(36486567-36486627)
[»] chr1 (71 HSPs)
chr1 (62-226)||(30395724-30395885)
chr1 (78-231)||(27201643-27201793)
chr1 (63-226)||(18944644-18944805)
chr1 (83-237)||(11596503-11596651)
chr1 (62-226)||(34725096-34725253)
chr1 (63-226)||(46247952-46248110)
chr1 (62-226)||(20004088-20004249)
chr1 (62-226)||(27474282-27474440)
chr1 (62-213)||(10668239-10668387)
chr1 (64-226)||(35117765-35117925)
chr1 (63-226)||(38478281-38478437)
chr1 (76-226)||(32632569-32632713)
chr1 (62-211)||(35005139-35005285)
chr1 (75-226)||(46991805-46991951)
chr1 (67-237)||(18724549-18724713)
chr1 (76-226)||(47214512-47214655)
chr1 (62-226)||(14617039-14617198)
chr1 (63-226)||(6925101-6925259)
chr1 (62-226)||(19414440-19414597)
chr1 (62-237)||(6983809-6983977)
chr1 (75-226)||(18741968-18742118)
chr1 (78-226)||(23768334-23768477)
chr1 (62-225)||(9939463-9939624)
chr1 (60-226)||(41319802-41319963)
chr1 (75-237)||(45812548-45812704)
chr1 (75-237)||(2435797-2435955)
chr1 (64-149)||(4349713-4349796)
chr1 (75-213)||(35253198-35253329)
chr1 (75-149)||(42304218-42304292)
chr1 (75-226)||(45402096-45402243)
chr1 (63-137)||(50606488-50606562)
chr1 (63-237)||(20036210-20036379)
chr1 (94-149)||(19932783-19932838)
chr1 (66-237)||(15511150-15511319)
chr1 (63-226)||(19701571-19701730)
chr1 (66-195)||(22324925-22325049)
chr1 (63-226)||(12126836-12126992)
chr1 (63-224)||(8197046-8197202)
chr1 (75-149)||(31442400-31442473)
chr1 (78-226)||(17470361-17470503)
chr1 (86-226)||(25468285-25468420)
chr1 (63-237)||(50811929-50812099)
chr1 (67-149)||(10378738-10378818)
chr1 (63-145)||(15505643-15505722)
chr1 (99-226)||(22930104-22930224)
chr1 (63-186)||(31382213-31382330)
chr1 (94-226)||(25290164-25290300)
chr1 (62-149)||(20999848-20999933)
chr1 (63-127)||(30555210-30555274)
chr1 (113-226)||(33222985-33223093)
chr1 (83-226)||(44485128-44485266)
chr1 (63-149)||(1517310-1517394)
chr1 (63-149)||(23796540-23796624)
chr1 (63-149)||(43768214-43768298)
chr1 (62-124)||(33594129-33594191)
chr1 (63-225)||(22327101-22327255)
chr1 (75-127)||(4587574-4587626)
chr1 (83-127)||(30682907-30682951)
chr1 (62-149)||(19974072-19974158)
chr1 (67-149)||(39214961-39215042)
chr1 (76-137)||(45264411-45264471)
chr1 (128-237)||(50760288-50760394)
chr1 (94-146)||(6358199-6358250)
chr1 (150-237)||(25554803-25554890)
chr1 (63-149)||(35019305-35019388)
chr1 (183-226)||(40424743-40424786)
chr1 (160-226)||(2435984-2436050)
chr1 (64-118)||(25554742-25554796)
chr1 (94-122)||(3060003-3060031)
chr1 (63-119)||(16120819-16120875)
chr1 (63-111)||(50760239-50760287)
[»] chr4 (81 HSPs)
chr4 (63-226)||(5648237-5648394)
chr4 (65-226)||(6430627-6430782)
chr4 (62-226)||(16911540-16911701)
chr4 (63-237)||(54175031-54175201)
chr4 (64-226)||(44363130-44363289)
chr4 (63-226)||(16408600-16408760)
chr4 (63-226)||(30639358-30639515)
chr4 (74-226)||(54730227-54730377)
chr4 (63-226)||(30352579-30352748)
chr4 (75-226)||(40915807-40915952)
chr4 (63-226)||(47528529-47528685)
chr4 (63-226)||(48598824-48598980)
chr4 (64-226)||(20224962-20225117)
chr4 (94-226)||(5306694-5306820)
chr4 (63-226)||(23501771-23501925)
chr4 (63-226)||(11054147-11054303)
chr4 (62-132)||(47482848-47482918)
chr4 (63-187)||(20639657-20639777)
chr4 (75-226)||(21646942-21647090)
chr4 (63-226)||(35567148-35567306)
chr4 (67-237)||(25343154-25343321)
chr4 (66-212)||(29207900-29208039)
chr4 (84-224)||(17043414-17043549)
chr4 (64-149)||(20225126-20225211)
chr4 (63-227)||(9832312-9832469)
chr4 (75-234)||(19027818-19027972)
chr4 (63-226)||(23580207-23580365)
chr4 (75-237)||(47441541-47441698)
chr4 (63-149)||(20908635-20908720)
chr4 (63-137)||(33836486-33836560)
chr4 (64-226)||(30690176-30690340)
chr4 (62-149)||(51865036-51865121)
chr4 (83-230)||(32478810-32478946)
chr4 (65-186)||(7909281-7909397)
chr4 (63-226)||(13256398-13256554)
chr4 (83-218)||(25463108-25463238)
chr4 (64-126)||(38755908-38755970)
chr4 (63-198)||(47443963-47444093)
chr4 (64-127)||(11394924-11394987)
chr4 (64-127)||(11404651-11404714)
chr4 (63-149)||(25629101-25629185)
chr4 (74-225)||(30496332-30496476)
chr4 (84-225)||(49938613-49938746)
chr4 (63-125)||(32484307-32484369)
chr4 (62-127)||(14983906-14983971)
chr4 (64-125)||(40553937-40553998)
chr4 (85-149)||(49796849-49796911)
chr4 (78-226)||(20405071-20405210)
chr4 (77-145)||(21489143-21489210)
chr4 (63-147)||(36816383-36816466)
chr4 (63-127)||(38786681-38786745)
chr4 (75-223)||(39077807-39077948)
chr4 (77-221)||(41018807-41018945)
chr4 (153-237)||(42164232-42164316)
chr4 (63-126)||(50555655-50555718)
chr4 (160-226)||(14590815-14590881)
chr4 (64-126)||(25388249-25388311)
chr4 (66-226)||(487128-487292)
chr4 (153-226)||(17315382-17315455)
chr4 (67-128)||(36589815-36589876)
chr4 (78-226)||(37494829-37494972)
chr4 (87-221)||(7385499-7385628)
chr4 (75-146)||(16494272-16494343)
chr4 (84-237)||(30581485-30581635)
chr4 (63-114)||(35532077-35532128)
chr4 (67-237)||(54966988-54967151)
chr4 (64-226)||(55766466-55766623)
chr4 (83-226)||(3580859-3580993)
chr4 (88-219)||(32629293-32629418)
chr4 (84-226)||(39029080-39029218)
chr4 (63-124)||(19027986-19028047)
chr4 (84-125)||(44718641-44718682)
chr4 (63-127)||(28494223-28494287)
chr4 (65-149)||(8473621-8473705)
chr4 (63-149)||(9987833-9987917)
chr4 (62-216)||(7038041-7038189)
chr4 (84-145)||(2813181-2813242)
chr4 (95-144)||(35894492-35894540)
chr4 (160-237)||(54640430-54640507)
chr4 (94-126)||(8820581-8820613)
chr4 (177-237)||(50856344-50856404)
[»] scaffold0168 (1 HSPs)
scaffold0168 (63-226)||(30557-30713)
[»] scaffold0258 (1 HSPs)
scaffold0258 (63-226)||(13023-13180)
[»] scaffold0049 (1 HSPs)
scaffold0049 (64-218)||(58963-59114)
[»] scaffold0057 (4 HSPs)
scaffold0057 (63-226)||(46809-46967)
scaffold0057 (78-226)||(24786-24924)
scaffold0057 (62-149)||(43709-43795)
scaffold0057 (84-128)||(46727-46771)
[»] scaffold0311 (1 HSPs)
scaffold0311 (77-226)||(10788-10932)
[»] scaffold0187 (2 HSPs)
scaffold0187 (94-226)||(10080-10205)
scaffold0187 (94-226)||(20408-20533)
[»] scaffold1176 (1 HSPs)
scaffold1176 (76-226)||(1599-1742)
[»] scaffold0015 (1 HSPs)
scaffold0015 (62-149)||(48632-48717)
[»] scaffold0254 (1 HSPs)
scaffold0254 (101-226)||(4135-4258)
[»] scaffold0180 (1 HSPs)
scaffold0180 (75-149)||(24144-24216)
[»] scaffold0223 (1 HSPs)
scaffold0223 (76-226)||(11110-11252)
[»] scaffold0018 (1 HSPs)
scaffold0018 (76-198)||(72879-72997)
[»] scaffold0954 (1 HSPs)
scaffold0954 (64-149)||(3596-3679)
[»] scaffold0005 (1 HSPs)
scaffold0005 (160-226)||(226497-226563)
[»] scaffold0036 (1 HSPs)
scaffold0036 (95-218)||(35048-35167)
[»] scaffold0031 (1 HSPs)
scaffold0031 (157-226)||(43107-43176)
[»] scaffold0024 (1 HSPs)
scaffold0024 (185-226)||(83853-83894)
[»] scaffold0194 (1 HSPs)
scaffold0194 (177-229)||(24639-24691)
[»] scaffold0167 (1 HSPs)
scaffold0167 (83-127)||(23671-23715)


Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 39124081 - 39123854
Alignment:
Q  13 atatactgttaacccttcaagagcgtaaatacacaacaccacatgggcctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaa 112  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  39124081 atatactgttaactcttcaagagcataaatacacaacaccacatgggcctaaaagggcagcttggtgcaccaaagctccctcatacgcagggtccgggaa 39123982  T
Q  113 ggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcaca 212  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  39123981 ggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttgaacccgtgtcgtttcagtcaca 39123882  T
Q  213 tgacaacaactttatcattgcgccaccc 240  Q
    |||||||||||||| |||||||||||||    
T  39123881 tgacaacaactttaccattgcgccaccc 39123854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 40464013 - 40463855
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||| ||||||||||  |||||||| ||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||    |||| |||    
T  40464013 taaaagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccattt--ggtgtattatacgcagcctt----acccagtt 40463920  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| ||||||| |||||| ||||||| | || ||||||||||||||||||||||    
T  40463919 tttacacaagagactgtttctatgacttgaacccgtgaccttacagtcacatgacaacaacttta 40463855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 64 - 225
Target Start/End: Complemental strand, 47716596 - 47716438
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 162  Q
    |||||||| | |||||||||||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |||    
T  47716596 aaagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtttt 47716501  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 225  Q
    ||||||||||| | ||||| |||||||| ||||||| | || |||||||||| ||||||||||    
T  47716500 ttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatggcaacaacttt 47716438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 42805662 - 42805502
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||| ||||||    ||||||| ||    
T  42805662 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagcct----taccctgttt 42805567  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  42805566 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 42805502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 21172007 - 21172164
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| |    
T  21172007 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-t 21172099  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | ||||||| |||||||||||||||||    
T  21172100 tttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaacttta 21172164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 43557611 - 43557450
Alignment:
Q  63 aaaagggcagctcggtgcaccaaa-gctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    ||||||||| | |||||||| ||| |||||| ||||||||| |||||||| |||||||||||||| |||||||||| ||||||||||    ||| ||| |    
T  43557611 aaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagcct----tactctgtt 43557516  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| | ||||| |||||||| |||| || | |||||||||||||||||||||||||    
T  43557515 ttttacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaacttta 43557450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 32758395 - 32758239
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||| ||||||    ||||||| ||    
T  32758395 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacacagcct----taccctg-tt 32758303  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||    
T  32758302 ttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 32758239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 222
Target Start/End: Original strand, 42391099 - 42391251
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| ||    
T  42391099 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-tt 42391191  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaac 222  Q
    ||||||||||  | ||||| |||||||| ||||||| | |||||||||||||||||||||    
T  42391192 ttacacaagaagctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaac 42391251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 10693073 - 10693228
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| | | |||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||  |||    
T  10693073 aaagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccct-cttt 10693165  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  10693166 tacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 10693228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 2541030 - 2541177
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagag 173  Q
    |||||||| ||||||||| ||||||||||| |||||||||||||||||||  ||||||||||  ||||||||||    ||||||| ||||||||||||||    
T  2541030 cggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccacca--tttggtgtatagtacgcagcct----taccctgttttttacacaagag 2541123  T
Q  174 accgtttctaggacttggacccgtgtcgttt-cagtcacatgacaacaacttta 226  Q
     | ||||| |||||||| ||||||| | ||| ||||||||||||||||||||||    
T  2541124 gctgtttccaggacttgaacccgtgacctttccagtcacatgacaacaacttta 2541177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 237
Target Start/End: Complemental strand, 19265949 - 19265782
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||||| |||||||| ||||||||| |||| | ||| |||||||||||||||||||||||  |||||||| |||||||||||    ||||| |||    
T  19265949 aaaagggcagcccggtgcactaaagctcccacatatgtagg-tccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctcttt 19265857  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||||||| | | || || | |||||| ||||||| | |||||||||| |||||||||||||| | ||||||||    
T  19265856 ttacacaagcggctgtatccaagacttgaacccgtgacctttcagtcacgtgacaacaactttaccgttgcgcca 19265782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 33871922 - 33872066
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 175  Q
    ||||||| ||||||| | ||||| ||||||| ||||||||||||||||||||  |||||||| |||||||||||    | ||||||||||||||||||      
T  33871922 ggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----atcctgtttttacacaagaggt 33872015  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     ||||| |||||||| ||||| | | |||||||||||||||||||||||||    
T  33872016 tgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttta 33872066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 22698978 - 22699127
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaag-gggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaaga 172  Q
    |||||||| | ||||||| ||||| |||||||||||||  |||||||||||||||||||||||| ||||||| |||    |||||||||| |||||||||    
T  22698978 cggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtctt----accctgttttttacacaaga 22699073  T
Q  173 gaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||  |||| |||||||| |||| |  | |||||||||||||||||||||||||    
T  22699074 gactatttccaggacttgaacccataacctttcagtcacatgacaacaacttta 22699127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 27629770 - 27629612
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | ||||||||  ||||| || |||| |||||| ||||||||||||||||||||||  ||||||||||||||| ||||    |||||||||    
T  27629770 aaaagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccattt--ggtgtattttacgcaacctt----accctgttt 27629677  T
Q  163 tt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    || ||||||||| | ||||| |||||||| ||||||| | |||| |||| |||||||||||||||    
T  27629676 tttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcaaatgacaacaacttta 27629612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 42798805 - 42798647
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | || ||||| | ||||||| |||| |||||||||||||| |||||||||||  ||||||||||| ||||||||||    |||| || ||    
T  42798805 aaaagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccacca--tttggtgtattgtacgcagcct----taccttgttt 42798712  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| ||||| | |||||| ||||||| | || ||||||||||||||||||||||    
T  42798711 tttacacaagagactgtttccaagacttgaacccgtgaccttccagtcacatgacaacaacttta 42798647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 34626207 - 34626364
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | || || || ||||||||| |||||||||||||||||||||| ||||||||  |||||||||||  |||||||||    ||||||||||    
T  34626207 aaaagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccacca--tttggtgtattgaacgcagcct----taccctgttt 34626300  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||| ||| | ||||| |||||||| | | ||| | ||||| |||||||||||||||||||    
T  34626301 ttacacaggaggctgtttccaggacttgaatctgtggcctttcaatcacatgacaacaacttta 34626364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 48735122 - 48735278
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    |||| || |||    
T  48735122 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccgtg-ttt 48735214  T
Q  164 tacacaagagaccgttt-ctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||   |||| | |||||||| ||||||| | |||||||||||||||||||||||||    
T  48735215 tacacaagaggttgtttccaaggacttgaacccgtgacctttcagtcacatgacaacaacttta 48735278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 11617589 - 11617745
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttt 163  Q
    ||||||| | |||||||| |||| |||  |||||||||||||| ||||||||||||||||  ||||||||||| ||||||| ||    ||||||| ||||    
T  11617589 aagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccacca--tttggtgtattgtacgcagtct----taccctgttttt 11617682  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||   ||||| |||||||| ||| ||| | |||||||||||||||||||||||||    
T  11617683 tacacaagaggttgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 11617745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 63 - 152
Target Start/End: Original strand, 27889315 - 27889402
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccc 152  Q
    ||||||||| | ||||| |||||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||    
T  27889315 aaaagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttccc 27889402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 13805217 - 13805069
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 182  Q
    |||||||||| |||||||||||||| ||||| |||||||||||||  |||||||| ||| ||||||| ||   |||||||| |||| |||| |  ||||     
T  13805217 caaagctcccgcatacgcagggtccaggaagtggtcccaccattt--ggtgtattgtacacagccttacc---cctgtttt-acaccagaggctatttcc 13805124  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||| ||||||  | ||||||||||||||||||||||||| ||||||||||    
T  13805123 aggacttgaacccgttacctttcagtcacatgacaacaactttaccattgcgcca 13805069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 28362164 - 28362313
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 182  Q
    |||||||||| |||| ||| |||| ||||||||||||||||||||  |||||||| ||||||||||| || |     |||||||||||||| | ||||||    
T  28362164 caaagctcccacatatgcaaggtctgggaaggggtcccaccattt--ggtgtattgtacgcagccttaccaagt---tttttacacaagaggcagtttct 28362258  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||| ||| ||| | |||||| |||||||||||||||||| | ||||||||    
T  28362259 aggacttgaacctgtgacctttcagccacatgacaacaactttaccgttgcgcca 28362313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 198
Target Start/End: Complemental strand, 7879774 - 7879644
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | ||||||||  |||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    |||| || ||    
T  7879774 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccttgttt 7879681  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtg 198  Q
    |||||||||||||  ||||| |||||||| |||||||    
T  7879680 tttacacaagagattgtttccaggacttgaacccgtg 7879644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 46354293 - 46354172
Alignment:
Q  102 gggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttggacccgtgtc 200  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| ||||||||||||||   ||||| |||||||| ||||||| |    
T  46354293 gggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgttttttacacaagaggttgtttccaggacttgaacccgtgac 46354198  T
Q  201 gtttcagtcacatgacaacaacttta 226  Q
     || || |||||||||||||||||||    
T  46354197 cttccaatcacatgacaacaacttta 46354172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 79 - 237
Target Start/End: Original strand, 3469190 - 3469347
Alignment:
Q  79 gcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg---tttttacacaagagac 175  Q
    |||| ||||||||| ||||| |||||||  |||||||||||| |||||||||||||||| ||||||     || |||||||   |||||||||||||||     
T  3469190 gcactaaagctcccgcatacacagggtctaggaaggggtcccgccatttttggtgtattgtacgca----accgtaccctgttttttttacacaagagaa 3469285  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
     ||||||||||||||   | ||| | ||||||||||||||||||||||||| | ||||||||    
T  3469286 tgtttctaggacttgagtctgtgacctttcagtcacatgacaacaactttaccgttgcgcca 3469347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 29907552 - 29907395
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 164  Q
    ||||||| | |||||||| ||||||||| |||||  ||||||||||| |||||||||||||||| ||||||||  |||||||||| |  ||  | |||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccatttt-ggtgtattgaacgcagccttac--actat-ttttt 29907459  T
Q  165 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatg--acaacaacttta 226  Q
    ||||||||| | |||||||||||||| ||||||| | |||||||||||||  ||||||||||||    
T  29907458 acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgatacaacaacttta 29907395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 18512466 - 18512581
Alignment:
Q  77 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagacc 176  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||  || |||||||| ||||||||||    |||||| |||||||||||||        
T  18512466 gtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacgcagcct----taccctatttttacacaagatgtt 18512559  T
Q  177 gtttctaggacttggacccgtg 198  Q
    ||||| |||||||| |||||||    
T  18512560 gtttccaggacttgaacccgtg 18512581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 35334827 - 35334971
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| ||||||||  |||||||||||||||||||||||||||||||  || |||||||| ||| ||| ||    ||||||||||||  ||| ||||    
T  35334827 cggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacacagtct----taccctgttttt-tacacgaga 35334919  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||| |||||||| || |||| | || ||||||||||||||||||||||    
T  35334920 ctgtttccaggacttgaactcgtgaccttccagtcacatgacaacaacttta 35334971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 16341413 - 16341256
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttt 163  Q
    ||||||||| |||||||||||||||||| |||| |   ||||||||||| || ||||||| |||||||||||| |||| |||||    ||||||| ||||    
T  16341413 aagggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccacca-ttttggtgtattgtacgtagcct----taccctgttttt 16341319  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||| | |||||||| ||||| ||||||| | |||||   |||||| ||||||||||    
T  16341318 tacacaagaggctgtttctagaacttgaacccgtgacctttcaaatacatgataacaacttta 16341256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 65 - 218
Target Start/End: Complemental strand, 18747621 - 18747472
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--ttt 162  Q
    ||||||||| |||||||| ||||||||| |||||||||||| | |||||||||||||||| ||  |||||||| |||||||||||    ||||||  |||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaatt--ggtgtattatacgcagcctt----accctgctttt 18747528  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaa 218  Q
    |||||||| || | ||||| | ||||||  |||||| | |||||||||| ||||||    
T  18747527 ttacacaaaaggctgtttccaagacttgatcccgtgacctttcagtcacgtgacaa 18747472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 19426889 - 19427046
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | ||||||||  |||||| | |||| |||||||||| |||||| |||||||||||  |||||||| ||||||| |||    ||||| |||    
T  19426889 aaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaaggg-tcccaccattt--ggtgtattgtacgcagtctt----accctattt 19426981  T
Q  163 t-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | |||||||||| | ||||| |||||||| ||||||| | |||| ||||||||||||||||||||    
T  19426982 tttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaacttta 19427046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 47077866 - 47078010
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| | ||||||| |||| | |||||  |||||||||||||||||||||  ||||||| |||||| | ||    || || |||| ||||||||||    
T  47077866 cggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccatttt--gtgtattgtacgcaacttt----actctatttt-acacaagaga 47077958  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  47077959 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 47078010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 23419674 - 23419842
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||||| || ||||| ||||| ||| || ||||| ||||  |||||||||||||||||||  |||||||| ||||||| |||    ||||||||||    
T  23419674 aaagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccattt--ggtgtattgtacgcagtctt----accctgtttt 23419767  T
Q  164 -tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
     |||||||||| | ||||| || ||||| ||| ||| | ||| |||||||||||| |||||||| | ||||||||    
T  23419768 ttacacaagaggctgtttccagaacttgaacctgtgaccttttagtcacatgacagcaactttaccgttgcgcca 23419842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 221
Target Start/End: Original strand, 32233134 - 32233286
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||  |||||||  ||||||||  ||||||||| | ||||| ||||    ||||||||||    
T  32233134 aaaagggcagcccggtgcactgaagctccctcatatgcagggtttgggaaggaatcccacca--tttggtgtaatatacgctgcct----taccctgttt 32233227  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaa 221  Q
    |||||||||||   ||||| |||||||| |||| || | |||||||||  |||||||||    
T  32233228 ttacacaagaggttgtttccaggacttgaacccatgacctttcagtcaggtgacaacaa 32233286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 76 - 151
Target Start/End: Original strand, 45018935 - 45019012
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca--tttttggtgtattttacgcagccttcc 151  Q
    ||||||| ||||||||| |||||||||||||||||||||||| ||||||  |||||||| |||| |||||||||||||    
T  45018935 ggtgcactaaagctcccgcatacgcagggtccgggaaggggttccaccagttttttggtatattgtacgcagccttcc 45019012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 173
Target Start/End: Complemental strand, 38604641 - 38604558
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagag 173  Q
    ||||||||| |||||||||||||||| |||||||| |||||  ||||||||||| ||||||||||    |||||||||||||||||||||    
T  38604641 aaagctcccgcatacgcagggtccggaaaggggtctcacca--tttggtgtattgtacgcagcct----taccctgtttttacacaagag 38604558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 84 - 224
Target Start/End: Original strand, 28078152 - 28078286
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttcta 183  Q
    ||||||| | |||| ||||| | |||||||||||||||||||||  ||||||||  | ||| ||||    |||||||||||  ||| ||||| |||||||    
T  28078152 aaagctctcgcatatgcaggattcgggaaggggtcccaccattt--ggtgtattgcatgcaacctt----accctgtttttttacacgagactgtttcta 28078245  T
Q  184 ggacttggacccgtgtcgtttcagtcacatgacaacaactt 224  Q
    ||||||| ||||||| | || ||||||||||||||||||||    
T  28078246 ggacttgaacccgtgaccttacagtcacatgacaacaactt 28078286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 14732832 - 14732979
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagag 173  Q
    |||||||| ||||||||| ||||  |||||| |||||||| ||  |||||||||||||||| || |||||||||    ||||||| ||||||||   |||    
T  14732832 cggtgcactaaagctcccgcataaacagggttcgggaaggagtttcaccatttttggtgta-ttgacgcagcct----taccctgttttttacatgggag 14732926  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     | ||||| |||||||| |||| || | |||||||||||||||||||||||||    
T  14732927 gctgtttccaggacttgaacccatgacttttcagtcacatgacaacaacttta 14732979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 226
Target Start/End: Complemental strand, 19266564 - 19266428
Alignment:
Q  85 aagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttcta 183  Q
    |||||||| |||||||||||||||||||||| |||||| |  ||||||||||| ||||||||||    ||||||| ||||||| |||| | |  |||  |    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaa--tttggtgtattgtacgcagcct----taccctgttttttacgcaagtggctattttca 19266471  T
Q  184 ggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||| ||||  | | |||||||||||||||||||||||||    
T  19266470 ggacttgaacccacgacctttcagtcacatgacaacaacttta 19266428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 42476994 - 42476851
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 175  Q
    ||||||| | ||||||| |||| |||| | |  ||||||||||||||||  ||||||||||| ||||||||||    |||| || |||||||||||||||    
T  42476994 ggtgcactagagctcccgcatatgcagagcctaggaaggggtcccacca--tttggtgtattgtacgcagcct----taccttg-ttttacacaagagac 42476902  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     ||||| || ||||| | ||||| | ||| |||||||||||||||||||||    
T  42476901 tgtttccagaacttgaatccgtgaccttttagtcacatgacaacaacttta 42476851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 42495919 - 42495992
Alignment:
Q  153 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| ||||||| | ||||| |||||||| ||||||| | ||||||||| |||||||||||||||    
T  42495919 taccctgtttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcatatgacaacaacttta 42495992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 13792149 - 13792213
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||||||||||||||| ||||||||  |||||||||||| || ||||||||||| ||||||    
T  13792149 aaaagggcagctcggtgcacaaaagctccagcatacgcagggttcgagaaggggtcccgccattt 13792213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 151
Target Start/End: Complemental strand, 21566560 - 21566485
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttcc 151  Q
    |||||||| ||||||||| |||| ||||||| ||||||||||||| |||| |||||||||||| ||||||| |||||    
T  21566560 cggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctacca-ttttggtgtattgtacgcagtcttcc 21566485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 31591107 - 31591192
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||| | |||||||| | ||||||| |||| ||| ||||||||||||||||||||||||| |  |||||| |||||||||||    
T  31591107 taaaagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttat--tgtattgtacgcagcctt 31591192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 89 - 145
Target Start/End: Complemental strand, 33500625 - 33500569
Alignment:
Q  89 tccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 145  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||  |||||||    
T  33500625 tcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcag 33500569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 173
Target Start/End: Original strand, 35787267 - 35787372
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||| | |||||||   |||||||| |||||||| |||||||||||||||||| |||  ||||||||||| |||||| |||    |||| ||||    
T  35787267 taaaagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgcca--tttggtgtattgtacgcaacct----taccatgtt 35787360  T
Q  162 tttacacaagag 173  Q
    ||||||||||||    
T  35787361 tttacacaagag 35787372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 23231692 - 23231609
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||| | |||||||||| |||||| || |||||||||||| ||||||||||||||| ||  || |||||||| |||||||||||    
T  23231692 aaagggaaactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatca--ttcggtgtattatacgcagcctt 23231609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 226
Target Start/End: Original strand, 14099036 - 14099163
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttgga 192  Q
    |||||| ||||| ||||||||||||||||||  ||||||||||| ||||||| ||    || |||| ||||||||||| || |  |||| |||||||  |    
T  14099036 catacgtagggttcgggaaggggtcccacca--tttggtgtattgtacgcagtct----taacctgttttttacacaaaaggctatttccaggacttcaa 14099129  T
Q  193 cccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||| || | |||||||||||||||||||||||||    
T  14099130 cccatgacctttcagtcacatgacaacaacttta 14099163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 94 - 226
Target Start/End: Original strand, 14409053 - 14409180
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttgga 192  Q
    |||||| ||||| ||||||||||||||||||  ||||||||||| ||||||| ||    || |||| ||||||||||| || |  |||| |||||||  |    
T  14409053 catacgtagggttcgggaaggggtcccacca--tttggtgtattgtacgcagtct----taacctgttttttacacaaaaggctatttccaggacttcaa 14409146  T
Q  193 cccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||| || | |||||||||||||||||||||||||    
T  14409147 cccatgacctttcagtcacatgacaacaacttta 14409180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 18327085 - 18327012
Alignment:
Q  153 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||||||||||| | |||||  ||||||| ||||||| | ||  |||||||||||||||||||||    
T  18327085 taccctgtttttacacaagaggctgtttccgggacttgaacccgtgaccttcaagtcacatgacaacaacttta 18327012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 7193127 - 7193063
Alignment:
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||   ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  7193127 tttacacaagaggttgtttcgaggacttgaacccgtgacctttcagtcacatgacaacaacttta 7193063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 237
Target Start/End: Complemental strand, 7645066 - 7644923
Alignment:
Q  89 tccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttctaggac 187  Q
    |||| ||||||||||||| || |||||||||||| ||||| |||||||| |||||   |||    ||||||||||| ||||||||| | ||||| |||||    
T  7645066 tcccgcatacgcagggtcagg-aaggggtcccacaatttt-ggtgtattgtacgctatctt----accctgttttttacacaagaggctgtttccaggac 7644973  T
Q  188 ttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||| ||||||| | |||||||||| | ||||||| |||| || |||||||    
T  7644972 ttgaacccgtgacctttcagtcacgttacaacaaatttaccactgcgcca 7644923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 65 - 225
Target Start/End: Complemental strand, 11741927 - 11741774
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 164  Q
    ||||||| | |||||||| | ||||||| |||  ||||  ||||||||||| ||||||||  ||||||||||| ||||||||||    ||||||  ||||    
T  11741927 aagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccacca--tttggtgtattgtacgcagcct----taccct-atttt 11741835  T
Q  165 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 225  Q
    |||| |||  | ||||  |||||||| |||| || | ||||||||||||||||||||||||    
T  11741834 acactagaagctgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttt 11741774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 82 - 237
Target Start/End: Original strand, 48123502 - 48123652
Alignment:
Q  82 ccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt-tttacacaagagaccgttt 180  Q
    ||||| ||||| |||| ||| ||||| | |||||||||||||||||  |||||||| || ||||  ||    |||||||| |||||||||||| | ||||    
T  48123502 ccaaacctcccgcatatgcatggtccagaaaggggtcccaccattt--ggtgtattgtatgcagtttt----accctgttatttacacaagaggctgttt 48123595  T
Q  181 ctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    | |||||||| |||| || | |||||| ||||||| |||||||||| | ||||||||    
T  48123596 ccaggacttgaacccatgacctttcagacacatgataacaactttaccgttgcgcca 48123652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 38262207 - 38262340
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagag 173  Q
    |||||||| ||||||||| ||||||||| || ||||||||||||||| ||  ||||||||||| || ||| | || || ||     ||||||||||||||    
T  38262207 cggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatca--tttggtgtattgtatgcaacattaccata----ttttttacacaagag 38262300  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacat 213  Q
    || ||||| |||||||| ||||||| | || |||||||||    
T  38262301 actgtttccaggacttgaacccgtgaccttccagtcacat 38262340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 6737022 - 6736868
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||||| |||||||| |||| ||| || |||||| |||||||||| || ||| |||||||  |||||||| || |||| ||| |||    ||||||    
T  6737022 aaagggcagcccggtgcac-aaaggtccttcgtacgcaaggtccgggaaaggctcc-accattt--ggtgtattgtatgcagtcttacct----tgtttt 6736931  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    || |||||||   ||||  |||||||| ||||||| | |||||||| ||||||||||||||||    
T  6736930 tatacaagaggttgttttgaggacttgaacccgtgacctttcagtcgcatgacaacaacttta 6736868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 198
Target Start/End: Complemental strand, 35203556 - 35203445
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 182  Q
    ||||||||| |||||| || || | ||||||| |||||||||||||||| |||| ||||||| ||    || |||| |||||||||||||||  |||||     
T  35203556 aaagctcccgcatacgtagagttcaggaagggatcccaccatttttggtatattgtacgcagtct----tatcctgttttttacacaagagaatgtttcc 35203461  T
Q  183 aggacttggacccgtg 198  Q
    |||||||| |||||||    
T  35203460 aggacttgaacccgtg 35203445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 94 - 127
Target Start/End: Complemental strand, 1408562 - 1408529
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccattt 127  Q
    ||||||||||||||||||||||||||||||||||    
T  1408562 catacgcagggtccgggaaggggtcccaccattt 1408529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 107
Target Start/End: Complemental strand, 25434157 - 25434112
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtcc 107  Q
    ||||||| ||||||||||||| ||||||||| ||||||||||||||    
T  25434157 taaaaggacagctcggtgcactaaagctcccgcatacgcagggtcc 25434112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 226
Target Start/End: Original strand, 5180202 - 5180314
Alignment:
Q  111 aaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtc 209  Q
    ||||||||| | |||||||||||| || ||| ||| |||    ||||||||||| ||||||||| | ||||| || | ||| |||| || | ||||||||    
T  5180202 aaggggtccaatcatttttggtgtgttgtacacagtctt----accctgtttttgacacaagaggctgtttccagaagttgaacccttgacctttcagtc 5180297  T
Q  210 acatgacaacaacttta 226  Q
    |||||||||||||||||    
T  5180298 acatgacaacaacttta 5180314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 76 - 115
Target Start/End: Original strand, 42495874 - 42495913
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggg 115  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  42495874 ggtgcactaaagctcccgcatacgcagggtccgggaaggg 42495913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 7794597 - 7794663
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||| ||||| | ||||| |||||||| ||||||| | || ||||||||| ||||||||||||    
T  7794597 tttttacataagaggctgtttccaggacttgaacccgtgaccttccagtcacataacaacaacttta 7794663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 44123705 - 44123778
Alignment:
Q  153 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||| |||||||||||||||| | ||||| || ||||| ||||||    |||||||||||||||| ||||||||    
T  44123705 taccttgtttttacacaagaggctgtttccagtacttgaacccgtaatctttcagtcacatgacaccaacttta 44123778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 36602583 - 36602535
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccggga 111  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||| ||||    
T  36602583 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtctggga 36602535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 103; Significance: 2e-51; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 64 - 237
Target Start/End: Complemental strand, 10543835 - 10543664
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 162  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||    ||||||| |||    
T  10543835 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgtttt 10543740  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatca-ttgcgcca 237  Q
    ||||||||||| ||||||| |||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||    
T  10543739 ttacacaagaggccgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttatcagttgcgcca 10543664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 24200622 - 24200782
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||| | ||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||    ||||||| ||    
T  24200622 aaaagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagcct----taccctgttt 24200717  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  24200718 tttacacaagaggctgtttccaggacttgaacccgtgacttttcagtcacatgacaacaacttta 24200782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 14530455 - 14530296
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 162  Q
    |||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||    ||||||| |||    
T  14530455 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagcct----taccctgtttt 14530360  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||| ||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  14530359 ttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 14530296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 60 - 231
Target Start/End: Complemental strand, 5841169 - 5841001
Alignment:
Q  60 cctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccct 158  Q
    |||||||||||| |||||||||| ||||||||| |||| || ||||||||||||||||||||||||| ||| |||||| |||||| |||| |||||        
T  5841169 cctaaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttacccta---- 5841074  T
Q  159 gtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcatt 231  Q
     ||||||||||| || | |||||||||||||| ||||||| | || |||||||||||||||||||||||||||    
T  5841073 ttttttacacaaaaggctgtttctaggacttgaacccgtgaccttccagtcacatgacaacaactttatcatt 5841001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 8455314 - 8455473
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt- 160  Q
    |||||||||| | |||||||| ||||||||  |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||||     
T  8455314 taaaagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgtg 8455407  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  8455408 ttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 8455473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 61 - 226
Target Start/End: Complemental strand, 9671317 - 9671158
Alignment:
Q  61 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt 160  Q
    ||||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    |||||||     
T  9671317 ctaaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg- 9671225  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgttt-cagtcacatgacaacaacttta 226  Q
    ||||||||||||| | ||||| |||| ||| ||||||| | ||| ||||||||||||||||||||||    
T  9671224 ttttacacaagaggctgtttccaggatttgaacccgtgacatttccagtcacatgacaacaacttta 9671158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 95 - 226
Target Start/End: Original strand, 12023950 - 12024075
Alignment:
Q  95 atacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacc 194  Q
    ||||||||||||||||| |||||||||||||||  |||||||| |||||||||||    |||||||||||||||||||| | ||||| |||||||| |||    
T  12023950 atacgcagggtccgggagggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttttacacaagaggctgtttccaggacttgaacc 12024043  T
Q  195 cgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||| | |||||||||||||||||||||||||    
T  12024044 cgtgacctttcagtcacatgacaacaacttta 12024075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 25249737 - 25249894
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| ||||||| | |||||||||||| ||||||||| |||||||||||  |||||||| |||||||||||    |||||||||    
T  25249737 aaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccattt--ggtgtattgtacgcagcctt----accctgttt 25249830  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     |||||||||||| ||||| | |||||| ||||||| | || ||||||||||||||||||||||    
T  25249831 gtacacaagagactgtttccatgacttgaacccgtgaccttacagtcacatgacaacaacttta 25249894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 17896396 - 17896237
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtt 161  Q
    ||||||||| |||| ||||| ||||||||| ||||||||||||||| |||||||||||||||  |||||| |||| ||||||||||| |||||   | ||    
T  17896396 aaaagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccacca--tttggtatattgtacgcagccttacccta---tttt 17896302  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||   |||||||||||||| | ||||| | |||| ||||||||||||||||||||    
T  17896301 tttacacaagaggttgtttctaggacttgaatccgtgacctttcggtcacatgacaacaacttta 17896237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 62 - 224
Target Start/End: Original strand, 21779259 - 21779414
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||||| |||    ||||||| |    
T  21779259 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcaacct----taccctg-t 21779351  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactt 224  Q
    |||||||||||| | || || |||||||| ||||||| | |||||||||||||||||||||||    
T  21779352 tttacacaagaggctgtctccaggacttgaacccgtgacctttcagtcacatgacaacaactt 21779414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 21377073 - 21377230
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    |||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||||  ||||||| ||| ||| ||||||    ||||||| ||    
T  21377073 aaaagggcagctcggtgcac-aaagctcccacatacgcagggttcgggaaggggtcccacca--tttggtgcattgtacccagcct----taccctgttt 21377165  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||   ||||||| |||||| || |||  | |||||||||||||||||||||||||    
T  21377166 tttacacaagaggatgtttctatgacttgaactcgtaacctttcagtcacatgacaacaacttta 21377230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 14444864 - 14444720
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| |  ||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||  ||| ||||||    ||||||||||    
T  14444864 aaaagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtatcgtacacagcct----taccctgttt 14444771  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacat 213  Q
    ||||||||||| | ||||| |||||||| ||||||| | || |||||||||    
T  14444770 ttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacat 14444720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 63 - 213
Target Start/End: Complemental strand, 10546299 - 10546153
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--t 160  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    |||||||  |    
T  10546299 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgttt 10546206  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacat 213  Q
    ||||| |||||||   ||||| |||||||| ||||||| | ||||||||||||    
T  10546205 ttttatacaagaggatgtttccaggacttgaacccgtgacctttcagtcacat 10546153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 7214659 - 7214512
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttttacacaagaga 174  Q
    ||||||| ||| ||| | ||||||||| ||||| |||||| || |||||||||| ||||||| |||||||||||    ||||||| ||||||||||||||    
T  7214659 ggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagcctt----accctgtattttacacaagaga 7214564  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||| | |||||| |||| || | |||||||||||||||||||||||||    
T  7214563 ctgtttccaagacttgaacccatgacctttcagtcacatgacaacaacttta 7214512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 17668138 - 17667980
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| |||||||||  ||||||||||| || |||||||| ||||||  ||||||||||| ||||||||||    ||||||| ||    
T  17668138 aaaagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccacca--tttggtgtattgtacgcagcct----taccctgatt 17668045  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||    |||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  17668044 tttacacaagaggttctttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 17667980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 25079717 - 25079875
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| | |||||||| |||||||   |||||||||||||||||||||||||||||||  || |||||||| |||||| |||| |||    | ||||    
T  25079717 aaagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacgcatccttacct--tgtttttt 25079812  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||   ||||||| |||||| ||||||| | || ||||||||||||||||||||||    
T  25079813 tacacaagaggttgtttctaagacttgaacccgtgaccttccagtcacatgacaacaacttta 25079875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 23397899 - 23397744
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| | |||||||| | ||||||| |||| | |||||||| |||||||||||||||  ||||||||||| |||| |||||    ||||||  |||    
T  23397899 aaagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccacca--tttggtgtattgtacgtagcct----taccct-attt 23397807  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||| | ||||| |||||||| |||| || | |||||||||||||||||||||||||    
T  23397806 tacacaagaggctgtttccaggacttgaacccatgacctttcagtcacatgacaacaacttta 23397744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 11514572 - 11514414
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    ||||||||||   |||||||| ||||||||| ||||||||||||| ||||| |||||||||||  ||||||||||| ||||||||||    |||  || |    
T  11514572 taaaagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaa-gggtcccacca--tttggtgtattgtacgcagcct----tactttgtt 11514480  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| | ||||| |||| ||| ||||||| | || ||||||||||||||||||||||    
T  11514479 ttttacacaagaggctgtttccaggagttgaacccgtgaccttccagtcacatgacaacaacttta 11514414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 188
Target Start/End: Complemental strand, 36871627 - 36871509
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| ||||||||| |||||||||| ||||||||||||||||||||  ||||||||||| ||||||||||    ||||||||||    
T  36871627 aaaagggcaacccggtgcactaaagctcccgcatacgcagg-tccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgttt 36871535  T
Q  163 ttacacaagagaccgtttctaggact 188  Q
    | ||||||||| | ||||| ||||||    
T  36871534 tcacacaagaggctgtttccaggact 36871509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 14544201 - 14544041
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| || ||||||| ||||||||| |||||||||||||| ||||||||||| ||||||||| |  ||||  |||||| ||    |||||||||||    
T  14544201 aaagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtct----taccctgtttt 14544106  T
Q  164 --tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
      |||||||||| | ||||| || || |||||| ||  | |||||||||||||||||||||||||    
T  14544105 tctacacaagaggctgtttccagtacctggacctgtaacctttcagtcacatgacaacaacttta 14544041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 17623700 - 17623542
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | | |||||| |||||| || |||||||||| | ||||||||||| |||||||||  |||||||| |||||||||||    |||||| ||    
T  17623700 aaaagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccattt--ggtgtattgtacgcagcctt----accctgatt 17623607  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||   ||||| |||||||| ||||||| | || ||||| ||||||||||||||||    
T  17623606 tttacacaagaggttgtttcgaggacttgaacccgtgaccttccagtcgcatgacaacaacttta 17623542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 95 - 226
Target Start/End: Complemental strand, 22371158 - 22371035
Alignment:
Q  95 atacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacc 194  Q
    |||| |||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||||||||||||  ||| | ||||| |||||||| |||    
T  22371158 atacacagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgtttttacac--gaggctgtttccaggacttgaacc 22371067  T
Q  195 cgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||| | |  ||||||||||||||||||||||    
T  22371066 cgtgacctcccagtcacatgacaacaacttta 22371035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 4516354 - 4516519
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttttta 165  Q
    ||||||| |||| ||| |||||| || |||||||||||||||||||||||||||||||   |||||||||| |||||||| |    | ||||| ||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccacca--attggtgtattgtacgcagcgt----tgccctgtttttta 4516447  T
Q  166 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||| | |||||||| ||||| |   ||| | |||||||||| |||||||||||||| | ||||||||    
T  4516448 cacaagaggctgtttctagaacttgaatatgtgacctttcagtcacgtgacaacaactttaccgttgcgcca 4516519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 237
Target Start/End: Complemental strand, 44643660 - 44643489
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-- 159  Q
    |||||||||||| |||||||| || |||||| ||||||||||||| |||||||||||||||||  ||||||  ||| ||||||||||    ||| |||      
T  44643660 taaaagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccacca--tttggtacattgtacgcagcct----tactctgtt 44643567  T
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||  ||||| |  ||||||| ||||| || |||| | ||||||||||||||  ||||||||| ||||||||||    
T  44643566 tttttacggaagaggctctttctagaacttgaacacgtgacctttcagtcacatgatgacaactttaccattgcgcca 44643489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 137
Target Start/End: Complemental strand, 23488620 - 23488545
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 137  Q
    |||||| ||| | |||||||| ||||||| | |||||||||||||||||||||||||||||||||||| |||||||    
T  23488620 taaaagagcaacccggtgcactaaagctctcgcatacgcagggtccgggaaggggtcccaccattttttgtgtatt 23488545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 99285 - 99420
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttcta 183  Q
    ||||||||| ||||| ||||||| | |||||||| |||||||||  |||||||| ||||||||||| ||     |||||||  ||||||| | |||||||    
T  99285 aaagctcccgcatacacagggtctgagaaggggttccaccattt--ggtgtattgtacgcagccttgcca----tgtttttt-acaagaggctgtttcta 99377  T
Q  184 ggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||| ||||||| | |||||||||| ||||||||||||||    
T  99378 ggacttgaacccgtgacctttcagtcacgtgacaacaacttta 99420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 31158459 - 31158598
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 182  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||| |||| || |||  ||    ||||||| ||||||| |||||| | ||||      
T  31158459 aaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatct----taccctgttttttacgcaagaggctgttttg 31158554  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | |||||  |||| || | |||||||||||||||||||||||||    
T  31158555 aagactttaacccttgacctttcagtcacatgacaacaacttta 31158598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 40762234 - 40762317
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| | |||||||| ||||||||| |||||||||||||| |||| |||||||||||  ||||||||||| |||| ||||||    
T  40762234 aaagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccacca--tttggtgtattgtacgtagcctt 40762317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 237
Target Start/End: Original strand, 17380238 - 17380404
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||| ||| |||||||| ||||||||| ||| |||||||||| ||||||||| ||| |||||  ||||||||  || || ||||    |||||||||     
T  17380238 aaagggaagcccggtgcac-aaagctcccgcatccgcagggtccaggaaggggttccatcattt--ggtgtattgcacacaacctt----accctgttta 17380330  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||||||||   ||||| | |||||| ||||||| | |||| ||||||||||||||||||   ||||||||||    
T  17380331 tacacaagaggttgtttccaagacttgaacccgtgacctttcggtcacatgacaacaacttcgccattgcgcca 17380404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 226
Target Start/End: Original strand, 29419945 - 29420046
Alignment:
Q  126 ttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactt 224  Q
    |||||||||||| ||||||||||| | ||||||| ||||||||||||||   ||||| |||||||| || |||| | |||||||||  ||||||||||||    
T  29419945 ttttggtgtattgtacgcagccttacttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttcagtcatgtgacaacaactt 29420044  T
Q  225 ta 226  Q
    ||    
T  29420045 ta 29420046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 226
Target Start/End: Complemental strand, 5450384 - 5450263
Alignment:
Q  101 agggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--tttttacacaagagaccgtttctaggacttggacccgtg 198  Q
    ||||||| ||||||||||||||| |||  |||||||| ||||||||||    |||| ||  ||||||||||||||   ||||| |||| ||| |||||||    
T  5450384 agggtccaggaaggggtcccacccttt--ggtgtattgtacgcagcct----taccatgtttttttacacaagaggttgtttccaggaattgaacccgtg 5450291  T
Q  199 tcgtttcagtcacatgacaacaacttta 226  Q
     | |||||||||||||||||||||||||    
T  5450290 acctttcagtcacatgacaacaacttta 5450263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 24859999 - 24860143
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| ||||||||| ||||||||||||||| |||||||| | |||||||  |||||||| ||||||||||     ||| ||||||||||| ||||     
T  24859999 cggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccattt--ggtgtattgtacgcagcct-----accatgtttttacaccagagg 24860091  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
      ||||| ||| |||  ||||||  | || ||||||||||||||||| ||||    
T  24860092 ttgtttccagggcttaaacccgtaaccttccagtcacatgacaacaatttta 24860143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 219
Target Start/End: Complemental strand, 25641625 - 25641487
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||| ||| ||||||| | |||||||||| | |||||||||||||||| ||||  |||||||| |||||| | ||    |||||||||| |||||| |      
T  25641625 cggttcactaaagctctcgcatacgcaggattcgggaaggggtcccacaattt--ggtgtattgtacgcaacttt----accctgttttcacacaaaatg 25641532  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaac 219  Q
    | ||||| |||||||| ||||||| | ||||||||||||||||||    
T  25641531 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaac 25641487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 40579750 - 40579810
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 125  Q
    ||||||| | |||||||| ||||||||| ||||| ||||||||||||||||||||||||||    
T  40579750 aagggcaacccggtgcactaaagctcccgcatactcagggtccgggaaggggtcccaccat 40579810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 76 - 215
Target Start/End: Complemental strand, 19615116 - 19614981
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagaga 174  Q
    ||||||| ||||||||  |||||||||||| ||||||||||| |||| ||| ||||| |||| ||||||| ||    ||||||| |||||| |||||||     
T  19615116 ggtgcactaaagctcctgcatacgcagggttcgggaaggggt-ccactattattggtatattgtacgcagtct----taccctgttttttatacaagagg 19615022  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatga 215  Q
      ||||| |||||||| ||||||| | ||||||||||||||    
T  19615021 atgtttcaaggacttgaacccgtgacctttcagtcacatga 19614981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 27573756 - 27573599
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | || ||||| ||||||||| ||||| ||||||  |||||  ||| |||||||||  |||||||| |||||||||||    ||| |||||    
T  27573756 aaaagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccattt--ggtgtattgtacgcagcctt----accatgttt 27573663  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     |||||||||| | ||| |  ||||||| |||  || | |||||||||||||||||||||||||    
T  27573662 atacacaagaggctgttgcccggacttgaaccaatgacctttcagtcacatgacaacaacttta 27573599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 83 - 237
Target Start/End: Original strand, 32781307 - 32781456
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttc 181  Q
    |||||||||| ||||| ||||||| |||||||||||||||||  ||||||||||| ||||||| ||    ||||||| ||||||||||||||   |||||    
T  32781307 caaagctcccgcatacacagggtctgggaaggggtcccacca--tttggtgtattgtacgcagtct----taccctgttttttacacaagaggttgtttc 32781400  T
Q  182 taggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
       |||||| || |||| | ||||||  ||||  ||||||||||| ||||||||||    
T  32781401 cgagacttgaactcgtgacctttcagcaacattgcaacaactttaccattgcgcca 32781456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 39914304 - 39914463
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-- 159  Q
    |||||||||| | || ||||| ||||||||| |||||||||||| | ||||||||||||||||  || |||||||| ||| ||    ||| |||||||      
T  39914304 taaaagggcaacccgatgcactaaagctcccgcatacgcagggt-caggaaggggtcccacca--ttcggtgtattgtacaca----tccttaccctgtt 39914396  T
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||||   ||||| || |||||  |||||| | || ||||||||||||||||||||||    
T  39914397 tttttacacaagaggttgtttccagtacttgatcccgtgaccttccagtcacatgacaacaacttta 39914463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 226
Target Start/End: Original strand, 45235820 - 45235975
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgttttta 165  Q
    ||||| || ||| ||| ||||||||  |||||| |||||| || ||||||||||||||||||  |||||||  ||| |||||| |||||   |  |||||    
T  45235820 gggcaacttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccatttt--gtgtattacacgtagccttacccta---ttatttta 45235914  T
Q  166 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    || ||||||| |||||||||||||| || ||||   |||||||||||||| ||||||||||    
T  45235915 cagaagagactgtttctaggacttgaactcgtgatctttcagtcacatgagaacaacttta 45235975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 15296405 - 15296490
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||||  || ||||||||||| || ||||||||||||||| |||||| |||||| | ||||||| |||| |||||||||||    
T  15296405 aaaagggcagcctggcgcaccaaagcttccacatacgcagggtccgagaagggatcccacta-ttttggtatattgtacgcagcctt 15296490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 83 - 226
Target Start/End: Complemental strand, 33795401 - 33795263
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattt-tacgcagccttccctaccctg-tttttacacaagagaccgttt 180  Q
    |||||||||| ||||| ||||||| |||||||||||||||||   | ||||||||| ||||||||||    ||||||| ||||||| ||||||   ||||    
T  33795401 caaagctcccgcatacacagggtctgggaaggggtcccacca---taggtgtatttgtacgcagcct----taccctgttttttacccaagaggttgttt 33795309  T
Q  181 ctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |  ||||||| ||||||| | ||||| |||| ||||||||||||||    
T  33795308 ccgggacttgaacccgtgacctttcaatcacgtgacaacaacttta 33795263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 34080238 - 34080176
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    |||||||||| | |||||||| ||| ||||| |||| ||||||||||||||||||||||||||    
T  34080238 taaaagggcaacccggtgcactaaaactcccgcatatgcagggtccgggaaggggtcccacca 34080176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 78 - 124
Target Start/End: Complemental strand, 34766376 - 34766330
Alignment:
Q  78 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||||    
T  34766376 tgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca 34766330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 224
Target Start/End: Original strand, 19977726 - 19977869
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagaga 174  Q
    ||||||| ||||||||| ||||| || ||| ||||||||| ||||||||  ||||||||||| |||||| ||||  ||||     |||||||| |||||     
T  19977726 ggtgcactaaagctcccgcatacacaaggttcgggaagggatcccacca--tttggtgtattgtacgcaaccttatccta----ttttttacaaaagagg 19977819  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactt 224  Q
    | ||||| || ||||| ||||||| | |||| ||||||||||||||||||    
T  19977820 ctgtttccagaacttgaacccgtgacctttcggtcacatgacaacaactt 19977869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 24890533 - 24890463
Alignment:
Q  77 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||| ||||||||  |||||||||||||||||||||||||||||||   |||||||||| || ||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgcagcctt 24890463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 44449407 - 44449467
Alignment:
Q  88 ctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||| || |||||||||||||||||||||||||| | |||||||||||| |||||||||||    
T  44449407 ctcccacaaacgcagggtccgggaaggggtcccacta-ttttggtgtattgtacgcagcctt 44449467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 44604905 - 44604832
Alignment:
Q  153 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||||||||||   ||||| |||||||| ||| ||| | || ||||||||||||||||||||||    
T  44604905 taccctgtttttacacaagaggttgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 44604832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 144
Target Start/End: Original strand, 19185763 - 19185823
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 144  Q
    ||||||||| |||||||||||||| ||||||||| ||||||||||| ||| ||| ||||||    
T  19185763 aaagctcccgcatacgcagggtccaggaaggggttccaccattttttgtgcattgtacgca 19185823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 119
Target Start/End: Complemental strand, 8576018 - 8575975
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcc 119  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||    
T  8576018 ggtgcactaaagctcccacatacgcagggtccgggaaggggtcc 8575975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 125
Target Start/End: Complemental strand, 41409995 - 41409936
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 125  Q
    |||||| | ||||||||  |||||||| |||| |||||||||||||||||||||||||||    
T  41409995 agggcaacccggtgcactgaagctcccgcatatgcagggtccgggaaggggtcccaccat 41409936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 3633708 - 3633762
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtc 118  Q
    |||||||| |||||||||| ||||||||| |||| || |||||||||||||||||    
T  3633708 aaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtc 3633762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 112
Target Start/End: Complemental strand, 22371249 - 22371199
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaa 112  Q
    |||||||||| | |||||||| ||||||||| |||||||||||||||||||    
T  22371249 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 22371199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 25632644 - 25632561
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| | |||||||| ||||||||| |||||| | ||| ||||||||  ||||||||  ||||||||||| |||||||||||    
T  25632644 aaagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccacca--tttggtgtattgtacgcagcctt 25632561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 125
Target Start/End: Original strand, 24059016 - 24059057
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccat 125  Q
    ||||||||| |||||||||||||||| |||||||||||||||    
T  24059016 aaagctcccacatacgcagggtccggaaaggggtcccaccat 24059057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 226
Target Start/End: Complemental strand, 17705537 - 17705473
Alignment:
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | ||  |||||||||||||||||||||    
T  17705537 tttacacaagaggcggtttccaggacttgaacccgtgaccttctagtcacatgacaacaacttta 17705473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 26684631 - 26684683
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||  ||||||||| |||||||||||| ||||||| |||||||||||||    
T  26684631 cggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccattt 26684683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 112
Target Start/End: Original strand, 124925 - 124962
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaa 112  Q
    |||||||| ||||||||| |||||||||||||||||||    
T  124925 cggtgcactaaagctcccgcatacgcagggtccgggaa 124962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 23145736 - 23145855
Alignment:
Q  102 gggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttggacccgtgtc 200  Q
    ||||||||||| |||||||||||   |||||||||| ||||||||||    ||| ||| |||||||||||||| | ||||  | |||||| ||||||| |    
T  23145736 gggtccgggaaagggtcccacca--attggtgtattgtacgcagcct----tacactgttttttacacaagagtctgttttcaagacttgaacccgtgac 23145829  T
Q  201 gtttcagtcacatgacaacaacttta 226  Q
     ||||||||||   ||||||||||||    
T  23145830 ctttcagtcacgctacaacaacttta 23145855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 102 - 226
Target Start/End: Original strand, 23557526 - 23557645
Alignment:
Q  102 gggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttggacccgtgtc 200  Q
    ||||||||||| |||||||||||   |||||||||| ||||||||||    ||| ||| |||||||||||||| | ||||  | |||||| ||||||| |    
T  23557526 gggtccgggaaagggtcccacca--attggtgtattgtacgcagcct----tacactgttttttacacaagagtctgttttcaagacttgaacccgtgac 23557619  T
Q  201 gtttcagtcacatgacaacaacttta 226  Q
     ||||||||||   ||||||||||||    
T  23557620 ctttcagtcacgctacaacaacttta 23557645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Complemental strand, 760114 - 760066
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccggga 111  Q
    |||||| ||||  ||||||||||||||||| |||||||||||| |||||    
T  760114 aaaaggacagcctggtgcaccaaagctcccacatacgcagggttcggga 760066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 23052964 - 23053012
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccggga 111  Q
    ||||||||||| |||||||| ||||||||  ||||||||||||| ||||    
T  23052964 aaaagggcagcccggtgcacaaaagctcctgcatacgcagggtctggga 23053012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 8e-45; HSPs: 62)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 62 - 225
Target Start/End: Original strand, 13628788 - 13628948
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    |||||||||    
T  13628788 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 13628883  T
Q  162 t-ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 225  Q
    | ||||||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  13628884 tcttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 13628948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 29366717 - 29366879
Alignment:
Q  61 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg- 159  Q
    ||||||||||| | | |||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    |||||||     
T  29366717 ctaaaagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgt 29366812  T
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||| ||||||| | ||||| |||||||| ||||||| | ||| |||||||||||||||||||||    
T  29366813 tttttatacaagaggctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaacttta 29366879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 26869864 - 26869707
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||||||||||||| |||||||| ||||||| ||||||||||||||  ||||||||||| ||||||||||    ||||||||||    
T  26869864 aaaagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgttt 26869771  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||| |||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||    
T  26869770 ttacaccagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 26869707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 46421055 - 46421194
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 182  Q
    ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |||||||||||||| | |||||     
T  46421055 aaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgttttttacacaagaggctgtttcc 46421150  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||| ||||||| | ||| |||||||||||||||||||||    
T  46421151 aggacttgaacccgtgacctttaagtcacatgacaacaacttta 46421194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 13730601 - 13730761
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||| ||||||    ||||||| ||    
T  13730601 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagcct----taccctgttt 13730696  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  13730697 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 13730761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 8247707 - 8247846
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 182  Q
    ||||||||| ||||||||||||||||||||| ||||||||||| |||||||||| |||||| |||    ||||||| |||||||||||||| | |||||     
T  8247707 aaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaacct----taccctgttttttacacaagaggctgtttcc 8247802  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||| ||||||| | |||||||||||||||||||||||||    
T  8247803 aggacttgaacccgtgacctttcagtcacatgacaacaacttta 8247846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 65 - 237
Target Start/End: Complemental strand, 22609921 - 22609755
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 164  Q
    ||||||| | ||||||||  |||||||| |||||||| |||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||||    
T  22609921 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttttt 22609828  T
Q  165 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||||||| | ||||| | |||||| ||||||  | || |||||||||||||||||||||| | ||||||||    
T  22609827 acacaagaggctgtttccaagacttgaacccgttaccttacagtcacatgacaacaactttaccgttgcgcca 22609755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 40272811 - 40272969
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| ||    
T  40272811 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgttt 40272904  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||   ||||| |||||||| |||| || | || ||||||||||||||||||||||    
T  40272905 tttacacaagaggttgtttccaggacttgaacccatgaccttccagtcacatgacaacaacttta 40272969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 34420642 - 34420801
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    |||||||||||   |||||| ||||||||| |||||||| |||||||||||||||||||||| |||||||||||  ||||||||||    ||||||| ||    
T  34420642 aaaagggcagccatgtgcactaaagctcccacatacgcaaggtccgggaaggggtcccacca-ttttggtgtatggtacgcagcct----taccctgttt 34420736  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | |||||||||| ||||||||||||||    
T  34420737 tttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaacttta 34420801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 63 - 225
Target Start/End: Original strand, 5173718 - 5173876
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| ||||||||| |||||||| |||||||||||||| ||||||||||||||||||||  | ||| |||    |||  |||||    
T  5173718 aaaagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaacct----tactttgttt 5173813  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 225  Q
    |||||||||||   ||||| |||||||| ||||||| | ||||||||||||||||||||||||    
T  5173814 ttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttt 5173876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 16735599 - 16735441
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||| | | ||||||  ||||| || ||||||||| ||||||||||||||||||||||||  |||||||| |||||||||||    ||||||||    
T  16735599 taaaagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtt 16735506  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||  ||||||| | ||||| |||||||| ||||||| |||| ||||||||||||||||||||||    
T  16735505 tttctacaagaggctgtttcgaggacttgaacccgtgacgttacagtcacatgacaacaacttta 16735441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 39203671 - 39203516
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| | |||||||| ||||||||| |||| ||| ||||||||||||||||||||||  ||||||||||| |||||| |||    ||||||| |||    
T  39203671 aaagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccacca--tttggtgtattgtacgcaacct----taccctg-ttt 39203579  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||    
T  39203578 tacacaagaggctgtttcaaggacttgaacctgtgacctttcagtcacatgacaacaacttta 39203516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 22122918 - 22123072
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 164  Q
    ||||||| | |||||||| | ||||| | |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||    ||||||||||     
T  22122918 aagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttt- 22123010  T
Q  165 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| ||||| |||||||| ||||| | | |||||||||||||||||||| ||||    
T  22123011 acacaagagactgtttccaggacttgaacccgcgacctttcagtcacatgacaacaaattta 22123072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 218
Target Start/End: Complemental strand, 516570 - 516417
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca-tttttggtgtattttacgcagccttccctaccctg-t 160  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||| ||||||||||||| ||| |||||||| |||| | ||||||||    ||||||| |    
T  516570 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagcct----taccctgtt 516475  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaa 218  Q
    ||||||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||    
T  516474 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 516417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 66 - 237
Target Start/End: Complemental strand, 26573282 - 26573116
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt- 164  Q
    ||||||||  ||||||| ||||||| | |||||||||||||||||| |||||||||||| ||  |||||||| |||||||||||    |||||||||||     
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaatt--ggtgtattgtacgcagcctt----accctgtttttt 26573189  T
Q  165 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||| ||| | ||||| |||||||| ||||||| | |||||||||| |||||||||||||| | ||||||||    
T  26573188 acacaggaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccgttgcgcca 26573116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 1217246 - 1217090
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||| |||  ||||||||||| ||||||||||    ||||||| ||    
T  1217246 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgcca--tttggtgtattgtacgcagcct----taccctg-tt 1217154  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| | ||||| |||||||| ||||||| | ||||||| ||||||| |||||||||    
T  1217153 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtgacatgactacaacttta 1217090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 198
Target Start/End: Original strand, 10795435 - 10795554
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttttacacaagaga 174  Q
    |||||||  |||||||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||||||    |||||||| |||||||||||||     
T  10795435 ggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgtcttttacacaagagg 10795530  T
Q  175 ccgtttctaggacttggacccgtg 198  Q
    | ||||| |||||||| |||||||    
T  10795531 ctgtttccaggacttgaacccgtg 10795554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 53996564 - 53996723
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||||| |||||||| ||||||||| ||||||||| ||| ||||||||||||||||| |||||||||||| || |||||||    ||||||| ||    
T  53996564 aaaagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccacca-ttttggtgtattgtaagcagcct----taccctgttt 53996658  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||   ||||| | |||||| || |||| | ||||||||| |||||||||| ||||    
T  53996659 tttacacaagaggttgtttccacgacttgaacacgtgacctttcagtcaaatgacaacaaattta 53996723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 25944628 - 25944469
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    |||||||||||  ||||| | ||||||||| ||||||||||||| ||||||||||||||||| |||||||||||| ||| ||||||| |   ||   |||    
T  25944628 aaaagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccacca-ttttggtgtattgtactcagccttgc---ccagtttt 25944533  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||| |||| | ||||| |||||||| |||| || | |||||||||| ||||||||||||||    
T  25944532 ttacacgagaggcggtttccaggacttgaacccatgacctttcagtcacgtgacaacaacttta 25944469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 45786214 - 45786299
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| | |||||||| ||||||||  ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  45786214 aaagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcctt 45786299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 74 - 226
Target Start/End: Original strand, 6411832 - 6411978
Alignment:
Q  74 tcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagag 173  Q
    ||||||||| ||||||||| |||||||| |||| |||||||||||||| ||  ||||||||||| ||||||||||    |||||||||||||||||||||    
T  6411832 tcggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatca--tttggtgtattgtacgcagcct----taccctgtttttacacaagag 6411925  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     | ||||  | |||||| |||| || | | ||||| |||||||||||||||||    
T  6411926 gctgtttacaagacttgaacccatgacctatcagttacatgacaacaacttta 6411978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 54484849 - 54484765
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  54484849 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 54484765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 9607342 - 9607203
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 182  Q
    ||||||||| |||| || ||||| |||||||||||||| |||| |||||||||| ||||||||||    ||||||| ||||||| |||||| | |||||     
T  9607342 aaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagcct----taccctgttttttacgcaagaggctgtttcc 9607247  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||| |||  || | |||||||||||||||||||||||||    
T  9607246 aggacttgaaccgatgacctttcagtcacatgacaacaacttta 9607203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 66 - 149
Target Start/End: Original strand, 353351 - 353434
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctt 353434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 190
Target Start/End: Complemental strand, 14987105 - 14986993
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagag 173  Q
    |||||||| ||||||||| |||| ||| |||||||||| ||||||||||||| |||||||||| ||||||||||    ||||||| ||||||||||||||    
T  14987105 cggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagcct----taccctgttttttacacaagag 14987010  T
Q  174 accgtttctaggacttg 190  Q
     | ||||| ||||||||    
T  14987009 gctgtttccaggacttg 14986993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 34771363 - 34771447
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||||| |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  34771363 aaaagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 34771447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 52926218 - 52926367
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||| | ||||||||| ||||||||||||||||||||| |||||||||  ||||||||||| ||||||||||| |               
T  52926218 aaaagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccacca--tttggtgtattgtacgcagccttac----------- 52926304  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     |||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  52926305 -tacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 52926367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 10870021 - 10870108
Alignment:
Q  135 attttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||||    |||||||||||||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  10870021 attttacgcagcctt----accctgtttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 10870108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 83 - 224
Target Start/End: Original strand, 30928166 - 30928302
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttc 181  Q
    |||||||||| |||| |||||||||||||||||||||| |||   |||||||||||||| || |||    |||| || |||||||||||||| | |||||    
T  30928166 caaagctcccacatatgcagggtccgggaaggggtcccgcca--attggtgtattttacacaacct----taccttgttttttacacaagaggctgtttc 30928259  T
Q  182 taggacttggacccgtgtcgtttcagtcacatgacaacaactt 224  Q
     |||||||| ||||||| | ||||||||||||||||| |||||    
T  30928260 caggacttgaacccgtgacctttcagtcacatgacaagaactt 30928302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 215
Target Start/End: Original strand, 45139479 - 45139624
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttt 163  Q
    ||||||||| |||||||| |||| |||| |||||||||| || |||||||||||||||||||||||||||||| || |||||||    |||||||| |||    
T  45139479 aagggcagcccggtgcac-aaagttcccgcatacgcagg-tctgggaaggggtcccaccatttttggtgtattgtatgcagcct----taccctgtgttt 45139572  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatga 215  Q
    ||||||||||   ||||| |  ||||| ||||||| | ||||||||||||||    
T  45139573 tacacaagaggttgtttccaaaacttgaacccgtgacctttcagtcacatga 45139624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 49013472 - 49013558
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||| | |||||||| ||||||||| | || || ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  49013472 aaaagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctt 49013558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 197
Target Start/End: Complemental strand, 31593004 - 31592878
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| | |||||||| | ||||||| |||| |||||||||||||||| |||||||||  ||||||||||| ||||||||||    ||||||| |||    
T  31593004 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccacca--tttggtgtattgtacgcagcct----taccctg-ttt 31592912  T
Q  164 tacacaagagaccgtttctaggacttggacccgt 197  Q
    |||||||||| | ||||| |||||||| ||||||    
T  31592911 tacacaagaggctgtttccaggacttgaacccgt 31592878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 7696903 - 7697042
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| | ||||||| |||| |||| |||||||||||||     ||||||  |||||||| |||||||||||    |||||||||| ||||||||||    
T  7696903 cggtgcactagagctcccacatatgcagtgtccgggaagggg-----ccattt--ggtgtattgtacgcagcctt----accctgtttt-acacaagaga 7696990  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||| |||||||| ||||||| | ||| |||||||||||||||||||||    
T  7696991 ctgtttccaggacttgaacccgtgaccttttagtcacatgacaacaacttta 7697042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 15797378 - 15797294
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  15797378 aaaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 15797294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 61 - 147
Target Start/End: Original strand, 25517167 - 25517251
Alignment:
Q  61 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcc 147  Q
    ||||||||||| | |||||||| ||||||||  |||||||||| ||||||||||||||||||||||||  ||||||| |||||||||    
T  25517167 ctaaaagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccatttt--gtgtattgtacgcagcc 25517251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 226
Target Start/End: Original strand, 12914032 - 12914192
Alignment:
Q  61 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg- 159  Q
    ||||||||||| | |||||||   |||||||| |||| |||||||| ||||||||||| |||||  ||||||||||| ||||| ||||    |||||||     
T  12914032 ctaaaagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcacca--tttggtgtattgtacgccgcct----taccctgt 12914125  T
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| | ||||| |||||||| ||  ||| | |||| ||||||| ||||||||||||    
T  12914126 tttttacacaagaggctgtttccaggacttgaacttgtgacctttcggtcacattacaacaacttta 12914192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 84 - 215
Target Start/End: Complemental strand, 33926220 - 33926094
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttcta 183  Q
    ||||||| | |||| ||||||||| |||||||||||||||||| | |||||||| ||| |||||||    |||||||||||||||||||| |  |||| |    
T  33926220 aaagctctcgcatatgcagggtccaggaaggggtcccaccattat-ggtgtattgtacacagcctt----accctgtttttacacaagaggctatttcca 33926126  T
Q  184 ggacttggacccgtgtcgtttcagtcacatga 215  Q
    ||||||| |||| || | ||||||||||||||    
T  33926125 ggacttgaacccatgacctttcagtcacatga 33926094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 95 - 173
Target Start/End: Complemental strand, 47624167 - 47624095
Alignment:
Q  95 atacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagag 173  Q
    |||| |||||||||||||||||||||||||  ||||||||||| ||||||||||    |||||||||||||||||||||    
T  47624167 atacacagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgtttttacacaagag 47624095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 54374344 - 54374429
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||| ||||||  |||| || ||||||||| |||| |||||||||||||||||||||||||| |||||||| ||| |||||||||||    
T  54374344 aaaatggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccacca-ttttggtggattgtacgcagcctt 54374429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 144
Target Start/End: Original strand, 829453 - 829521
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 144  Q
    |||||||| ||||||||  |||||||||||| |||||||||||||||||| |||||||||||| ||||||    
T  829453 cggtgcactaaagctcctgcatacgcagggttcgggaaggggtcccacca-ttttggtgtattgtacgca 829521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 24851300 - 24851364
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    ||||||||| | |||||||| ||||||||| |||| ||||| |||||||||||||||||||||||    
T  24851300 aaaagggcaacccggtgcactaaagctcccgcatatgcaggatccgggaaggggtcccaccattt 24851364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 45948849 - 45949009
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagag 173  Q
    |||||||| ||||||||| ||||||||||||||| |||||||||||||||   |||||||||| || |||||||| |||||     ||||||||||||||    
T  45948849 cggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccacca--attggtgtattgtatgcagccttacccta----ttttttacacaagag 45948942  T
Q  174 accgtttctaggacttggacccgtgtcgt---ttcagtcacatgacaacaactttatcattgcgcca 237  Q
       ||||| |||| ||| ||||||| | |   ||||||||||||| |||||||| | | ||||||||    
T  45948943 gttgtttccaggaattgaacccgtgaccttccttcagtcacatgaaaacaacttcaccgttgcgcca 45949009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 45620890 - 45620997
Alignment:
Q  128 ttggtgtattttacgcagccttccctaccctgtttt--tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 225  Q
    |||||||||| |||||||||||    ||||||||||  |||||||||| | ||||| || ||||| ||||||| | |||||||||| |||||||||||||    
T  45620890 ttggtgtattgtacgcagcctt----accctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttcagtcacgtgacaacaacttt 45620985  T
Q  226 atcattgcgcca 237  Q
    | | ||||||||    
T  45620986 accgttgcgcca 45620997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 30452954 - 30452892
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    |||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||    
T  30452954 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca 30452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 119
Target Start/End: Original strand, 10484614 - 10484671
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcc 119  Q
    |||||||||| | |||||||| ||||||||| |||||||||||||| |||||||||||    
T  10484614 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcc 10484671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Original strand, 44403554 - 44403619
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 128  Q
    |||| |||||| |||||||| |||||| |  |||||| ||||||||||||||||||||||||||||    
T  44403554 aaaaaggcagcccggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccatttt 44403619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 68 - 145
Target Start/End: Complemental strand, 55401330 - 55401254
Alignment:
Q  68 ggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 145  Q
    |||||| |||||||  ||||||||| |||||| | |||||| ||||||||||||||| |||||||||||| |||||||    
T  55401330 ggcagcccggtgcaaaaaagctcccgcatacggaaggtccgagaaggggtcccacca-ttttggtgtattatacgcag 55401254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 223
Target Start/End: Complemental strand, 7943134 - 7942993
Alignment:
Q  77 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagac 175  Q
    |||||| ||||||||| |||||||| |||| || ||||| ||||||||  |||| |||||| ||||||| ||    ||||||| |||||| ||||||  |    
T  7943134 gtgcactaaagctcccgcatacgcatggtctggaaagggatcccacca--tttgatgtattgtacgcagtct----taccctgttttttagacaagatgc 7943041  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaact 223  Q
     ||||| |||||||| | ||||| | || |||||||||||||||||||    
T  7943040 tgtttccaggacttgaatccgtgaccttccagtcacatgacaacaact 7942993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 85 - 219
Target Start/End: Complemental strand, 12525543 - 12525414
Alignment:
Q  85 aagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttcta 183  Q
    ||||||||  |||| |||||||  |||||| |||||||||||||||||||| ||  ||||||||    ||||||| |||||||||||||| | ||||| |    
T  12525543 aagctcccgtatacacagggtctaggaaggtgtcccaccatttttggtgtactt--cgcagcct----taccctgatttttacacaagaggctgtttcca 12525450  T
Q  184 ggacttggacccgtgtcgtttcagtcacatgacaac 219  Q
    ||||| | ||| ||| | ||||||||| ||||||||    
T  12525449 ggactcgaacctgtgacctttcagtcatatgacaac 12525414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 62 - 128
Target Start/End: Complemental strand, 40968677 - 40968611
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 128  Q
    ||||||||||||||| ||||| ||||||||| |||| | ||||||  |||||||||| |||||||||    
T  40968677 taaaagggcagctcgatgcactaaagctcccgcatatgtagggtctaggaaggggtctcaccatttt 40968611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 53062112 - 53062038
Alignment:
Q  153 taccctgttttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| ||||| ||| | ||||| |||||||| || |||| | |||||||||||||||||||||||||    
T  53062112 taccctgtttttgacacaggaggctgtttccaggacttgaacacgtgacctttcagtcacatgacaacaacttta 53062038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 114 - 226
Target Start/End: Original strand, 4495714 - 4495821
Alignment:
Q  114 gggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcaca 212  Q
    ||||||||||||||  |||||||| |||||||||||    ||||||||||| |||||| || |  |||  |||||||| ||||||| | || ||||||||    
T  4495714 gggtcccaccattt--ggtgtattgtacgcagcctt----accctgttttttacacaataggctattttcaggacttgaacccgtgaccttccagtcaca 4495807  T
Q  213 tgacaacaacttta 226  Q
    ||||||||||||||    
T  4495808 tgacaacaacttta 4495821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 112
Target Start/End: Complemental strand, 47624257 - 47624208
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaa 112  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||    
T  47624257 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaa 47624208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 50624952 - 50625013
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    ||||||||||| |||||||| ||||||||| | ||||||||| || |||||| |||||||||    
T  50624952 aaaagggcagcccggtgcactaaagctcccacttacgcagggcccaggaaggcgtcccacca 50625013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 45416932 - 45416986
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggt 117  Q
    |||||||||||| |||||||| |||||| |  ||||||||||||||||||||||||    
T  45416932 taaaagggcagcccggtgcac-aaagcttctgcatacgcagggtccgggaaggggt 45416986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 149
Target Start/End: Complemental strand, 9276400 - 9276338
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||| |||| ||||||||||||||||||| |||| ||||||  ||||||||||| |||||||||||    
T  9276400 aaagttcccgcatacgcagggtccgggaaagggt-ccacca--tttggtgtattgtacgcagcctt 9276338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 127
Target Start/End: Original strand, 46169988 - 46170030
Alignment:
Q  85 aagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||| |||| ||||||||||||||||||||| |||||||    
T  46169988 aagctcccacatatgcagggtccgggaaggggtcctaccattt 46170030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 54032568 - 54032614
Alignment:
Q  61 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtcc 107  Q
    ||||||||||| | |||||||| ||||||||| ||||||||||||||    
T  54032568 ctaaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 54032614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 35417982 - 35417905
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||||||||| | ||||| |||| ||| || |||| | | |||||||||||| |||||||||| | ||||||||    
T  35417982 tttttacacaagaggctgtttccaggatttgaactcgtgacctctcagtcacatgataacaactttaccgttgcgcca 35417905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 4495675 - 4495719
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtcc 107  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||    
T  4495675 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtcc 4495719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 127
Target Start/End: Complemental strand, 35418058 - 35417998
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    ||||||| || ||||| ||||||| | |||  || ||||||||||||||||||||||||||    
T  35418058 gggcagcccgatgcactaaagctctcgcatttgcggggtccgggaaggggtcccaccattt 35417998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 107
Target Start/End: Original strand, 43956471 - 43956515
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtcc 107  Q
    ||||||||||| |||||||| ||||||||| ||||||| ||||||    
T  43956471 aaaagggcagcccggtgcactaaagctcccgcatacgctgggtcc 43956515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 89; Significance: 5e-43; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 38879720 - 38879559
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  38879720 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 38879625  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||| ||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  38879624 ttttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 38879559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 43334340 - 43334180
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--t 160  Q
    ||||||||| | |||||||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    |||||||  |    
T  43334340 aaaagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgttt 43334246  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||| ||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  43334245 ttttacacaggaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 43334180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 27328869 - 27328730
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 182  Q
    ||||||||| |||||||||||| |||||||||||||||||||| |||||||||| ||||||||||    ||||||| |||||||||||||||| |||||     
T  27328869 aaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgttttttacacaagagactgtttcc 27328774  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||| ||| ||| | |||||||||||||||||||||||||    
T  27328773 aggacttgaacctgtgacctttcagtcacatgacaacaacttta 27328730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 41014455 - 41014297
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||| | |||||||| ||||||||| |||| || |||||| |||||||||||||||||||  |||||||| |||||||||||    ||||||||    
T  41014455 taaaagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtt 41014362  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  41014361 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 41014297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 4619102 - 4619263
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    |||||||||| | |||||||| ||||||| | |||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  4619102 taaaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 4619197  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| |  |||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  4619198 ttttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 4619263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 24449026 - 24448868
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtt 161  Q
    ||||||||| | |||||||| ||||||||  |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| |||||     ||    
T  24449026 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagccttacccta----ttt 24448933  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||| || | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  24448932 tttacacaaaaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 24448868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 61 - 217
Target Start/End: Complemental strand, 32703560 - 32703411
Alignment:
Q  61 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt 160  Q
    ||||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    |||||||     
T  32703560 ctaaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg- 32703468  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgaca 217  Q
    ||||||||||||| | ||||| |||||||| ||||||| | ||||||||||||||||    
T  32703467 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgaca 32703411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 8169983 - 8170139
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | ||||||||  || ||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| ||    
T  8169983 aaaagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-tt 8170075  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||| || | ||||| |||||||| ||||||| | |||| ||||||||||||||||||||    
T  8170076 ttacacaaaaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaacttta 8170139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 237
Target Start/End: Original strand, 19142942 - 19143110
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||||  | |||||| ||| ||||| |||||||| ||||||||||||||||||||||  ||||||||| | ||||||||||    ||||||||||    
T  19142942 aaaagggcaggccagtgcactaaatctcccgcatacgcatggtccgggaaggggtcccacca--tttggtgtactgtacgcagcct----taccctgttt 19143035  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||||||   ||||| |||||||| ||| ||| | ||| |||||| ||||||||| |||| ||||||||||    
T  19143036 ttacacaagaggttgtttccaggacttgaacctgtggcattttagtcacgtgacaacaattttaccattgcgcca 19143110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 35710447 - 35710291
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||| |||| ||| | ||||||||||||||||||||  |||||||||||  |||||||||    ||||||  ||    
T  35710447 aaaagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccacca--tttggtgtattgaacgcagcct----taccct-att 35710355  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| | ||||| |||||||| ||||||| | ||||||| |||||||||||||||||    
T  35710354 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagttacatgacaacaacttta 35710291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 64 - 144
Target Start/End: Original strand, 12575660 - 12575739
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 144  Q
    |||||||||| |||||||||||||||||  |||||||||||||| |||||||||||||||| |||||||||||| ||||||    
T  12575660 aaagggcagcccggtgcaccaaagctcctgcatacgcagggtccaggaaggggtcccacca-ttttggtgtattgtacgca 12575739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 43574730 - 43574564
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaagag 173  Q
    |||||| | ||||||||| |||||||||||||||||||||||||||||||  |||||| |||| ||||||||||    ||||||||||| ||||||||||    
T  43574730 cggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtatattgtacgcagcct----taccctgttttctacacaagag 43574637  T
Q  174 accgtttctaggacttggaccc---------gtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |  ||||| |||||||| || |         ||| | |||||||||| |||||||||||||||||||||||||    
T  43574636 attgtttccaggacttgaacacgtgaccgaagtgacctttcagtcacgtgacaacaactttatcattgcgcca 43574564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 195
Target Start/End: Original strand, 13801767 - 13801895
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 162  Q
    |||||||| | |||||||| ||||||| | |||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |||    
T  13801767 aaagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtttt 13801862  T
Q  163 ttacacaagagaccgtttctaggacttggaccc 195  Q
    ||||||||||| | | ||| |||||||| ||||    
T  13801863 ttacacaagaggctgcttccaggacttgaaccc 13801895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 75 - 237
Target Start/End: Complemental strand, 39301247 - 39301090
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaagag 173  Q
    |||||||| ||| ||||| |||||| ||||||||||||||||||||||| ||||||||| ||| |||||| ||||    |||||||||| ||||||||||    
T  39301247 cggtgcactaaa-ctcccacatacggagggtccgggaaggggtcccacc-tttttggtgcattatacgcatcctt----accctgttttatacacaagag 39301154  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
       ||| | | |||||| ||||||| | ||||||| ||||||||||||||||| | ||||||||    
T  39301153 gttgttcccaagacttgaacccgtgacctttcagtaacatgacaacaactttaccgttgcgcca 39301090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 2838899 - 2838756
Alignment:
Q  78 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccg 177  Q
    |||||| | |||||| ||||||||||||||| |||||| ||||||||  ||||||||||| ||||||||||    ||||||||||||||||||||  | |    
T  2838899 tgcaccgatgctcccgcatacgcagggtccgagaagggatcccacca--tttggtgtattgtacgcagcct----taccctgtttttacacaagatgctg 2838806  T
Q  178 tttctaggacttggacccgtgtcgttt-cagtcacatgacaacaacttta 226  Q
    |||||  ||||||  | |||| | ||| ||||||||||||||||||||||    
T  2838805 tttctgagacttgacctcgtgacctttacagtcacatgacaacaacttta 2838756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 173
Target Start/End: Original strand, 7097760 - 7097863
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    ||||||||||  ||||||| ||||||||| |||||||||||| |||||||||||| |||||  ||||||||||| |||||| |||    |||||||||||    
T  7097760 aaagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcacca--tttggtgtattgtacgcaacct----taccctgtttt 7097853  T
Q  164 tacacaagag 173  Q
    ||||||||||    
T  7097854 tacacaagag 7097863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 16957451 - 16957386
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  16957451 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 16957386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 135
Target Start/End: Complemental strand, 25622584 - 25622524
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgta 135  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||    
T  25622584 cggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgta 25622524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 208925 - 209084
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||| || || |||||||| |||||||   ||||| |||||||| |||||||||||||||| ||||||||||||  | |||||||    |||||||||    
T  208925 taaaagtgccgcccggtgcactaaagctcttgcatacccagggtccaggaaggggtcccacca-ttttggtgtattgaatgcagcct----taccctgtt 209019  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||   ||| | |||||||| ||  ||| | ||| |||||||||||||||||||||    
T  209020 tttacacaagaggttgttgccaggacttgaacttgtgaccttttagtcacatgacaacaacttta 209084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 29334533 - 29334447
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||||| |||||||  |||| |||| ||||||||||||||||||| ||||||||||| || ||||||||| |||||||||||    
T  29334533 taaaagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccacca-ttctggtgtattgtacgcagcctt 29334447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 229
Target Start/End: Original strand, 22861667 - 22861826
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    ||||||||||  ||||||||| | ||||||| |||| ||||||| || ||||||||||||||||||  | |||||| |  |||| ||| | |       |    
T  22861667 taaaagggcaattcggtgcactagagctcccgcatatgcagggttcgagaaggggtcccaccattt--gatgtattgtgagcagtcttacttg------t 22861758  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatca 229  Q
    |||||||||||||| | |||||||||||| | ||||| | ||||||||||||||||||||||||||||    
T  22861759 tttacacaagagactgcttctaggacttgaatccgtgacctttcagtcacatgacaacaactttatca 22861826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 137
Target Start/End: Original strand, 12006329 - 12006401
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 137  Q
    ||||||| | |||||||| ||||||||| |||| |||||||| ||||||||||||||||||| ||||||||||    
T  12006329 aagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtatt 12006401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 65 - 149
Target Start/End: Complemental strand, 20135740 - 20135656
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||| | ||||||||  |||||||  |||| || ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctt 20135656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 22600569 - 22600432
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttttacacaagagaccgtttct 182  Q
    ||||||||| |||||||||| ||||||||||| ||||||||  ||||||||||| ||| ||||||    |||||||| |||||||||| | |  |||||     
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccacca--tttggtgtattgtacacagcct----taccctgtgttttacacaaaatattgtttcc 22600476  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||| ||||||  | || ||||||||||| ||||||||||    
T  22600475 aggacttgaacccgtaaccttccagtcacatgataacaacttta 22600432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 3771476 - 3771414
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    |||||||||||| |||||||| ||||||||| ||||| ||| |||||||||||||||||||||    
T  3771476 taaaagggcagcccggtgcactaaagctcccacatacacagagtccgggaaggggtcccacca 3771414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 7368520 - 7368413
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| | ||||||| |||| ||||||||||||||||||||||||||   |||||||||| ||||||||||    ||||||| |||||||||||||     
T  7368520 cggtgcactagagctcccacatatgcagggtccgggaaggggtcccacca--attggtgtattgtacgcagcct----taccctg-ttttacacaagagg 7368428  T
Q  175 ccgtttctaggactt 189  Q
    | ||||| |||||||    
T  7368427 ctgtttccaggactt 7368413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 12477119 - 12477204
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||| | ||||||| |||||||   |||||||||  |||||||||||||||||||| |||||||||||| |||||||||||    
T  12477119 aaaagggcagttgggtgcactaaagctcttgcatacgcagaatccgggaaggggtcccacca-ttttggtgtattgtacgcagcctt 12477204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 34154814 - 34154897
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| | |||||||| | |||| || |||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  34154814 aaagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 34154897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 84 - 137
Target Start/End: Original strand, 10306494 - 10306546
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 137  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  10306494 aaagctcccgcatacgcagggtccgggaaggggtcccacca-ttttggtgtatt 10306546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 67 - 128
Target Start/End: Original strand, 21784335 - 21784396
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 128  Q
    ||||| |||||||||| ||| ||||| |||||||||||||||| ||||||||||||||||||    
T  21784335 gggcaactcggtgcactaaacctcccgcatacgcagggtccggaaaggggtcccaccatttt 21784396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 226
Target Start/End: Original strand, 37024646 - 37024711
Alignment:
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  37024646 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 37024711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 1565566 - 1565409
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| | |||||||| || |||||| |||| |||||||||||||||||||||| |||  ||||||| ||| |||||||||||   ||   | ||||    
T  1565566 aaagggcaacccggtgcactaa-gctcccacatatgcagggtccgggaaggggtcccgcca--tttggtgcattgtacgcagcctt-aata-tgtttttt 1565472  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||| ||||||   ||||| |||||||| ||||| | | |||||||||||||||||||||||||    
T  1565471 tactcaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttta 1565409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 16880658 - 16880730
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| ||||||||| |||||||| ||||||||||| |||| |||||  ||||||||||| |||||||||||    
T  16880658 cggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacacca--tttggtgtattgtacgcagcctt 16880730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 28516432 - 28516591
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| |  ||| ||| ||||||||  ||| ||||||||| ||||| ||||||||||||||| | |||||| |||||||||    ||| |||||||    
T  28516432 aaaagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccatttt-gatgtattgtacgcagcc----ctagcctgttt 28516526  T
Q  163 t-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||||||||   ||||| | |||||| ||||||| | |||||| ||| ||||||||||||||    
T  28516527 tttacacaagaggatgtttccaagacttgaacccgtgacctttcagccacctgacaacaacttta 28516591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 220
Target Start/End: Complemental strand, 1850763 - 1850624
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| |||||| || ||| |||||||||| ||||| ||||||||||  |||| |||||| |||||| |||    ||  |||||||||||||||||     
T  1850763 cggtgcactaaagcttccgcatccgcagggtccaggaagtggtcccacca--tttgatgtattgtacgcaccct----tattctgtttttacacaagagg 1850670  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaaca 220  Q
       ||||  ||||||| ||||||| | |||||||||||||||||||    
T  1850669 ttatttccgggacttgaacccgtgacctttcagtcacatgacaaca 1850624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 128
Target Start/End: Complemental strand, 19093949 - 19093884
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 128  Q
    ||||||||||| |||||||| ||||||||  ||||||||||||||||| |||||||  ||||||||    
T  19093949 aaaagggcagcccggtgcactaaagctccaacatacgcagggtccgggtaggggtcataccatttt 19093884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 237
Target Start/End: Complemental strand, 23974824 - 23974747
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||||||||||||   ||||| |||||||| ||||||| | || |||||||||||||||||||||| | ||||||||    
T  23974824 tttttacacaagaggttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaactttaccgttgcgcca 23974747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 123
Target Start/End: Original strand, 16028623 - 16028683
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacc 123  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  16028623 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacc 16028683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 123
Target Start/End: Original strand, 30877564 - 30877623
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacc 123  Q
    |||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||    
T  30877564 aaagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccacc 30877623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 61 - 124
Target Start/End: Complemental strand, 39801654 - 39801591
Alignment:
Q  61 ctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    |||||| |||| | |||||||| ||||||||| |||||| |||||| |||||||||||||||||    
T  39801654 ctaaaatggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 11657698 - 11657783
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||||| ||||| || |||| |||| | |  ||||||| |||||||||||||||||| |||||||||||| || ||||||||    
T  11657698 aaaagggcagcccggtgaactaaagttcccgcgtgtgcagggttcgggaaggggtcccacca-ttttggtgtattgtatgcagcctt 11657783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 120
Target Start/End: Original strand, 10943844 - 10943900
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtccc 120  Q
    ||||||||||| |||||||| ||||||||| |||  ||||||||||||||||||||||    
T  10943844 aaaagggcagcccggtgcactaaagctcccgcat-tgcagggtccgggaaggggtccc 10943900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 127
Target Start/End: Original strand, 21542489 - 21542530
Alignment:
Q  86 agctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    ||||||| ||||||||| ||||||||||||||||||||||||    
T  21542489 agctcccgcatacgcagagtccgggaaggggtcccaccattt 21542530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 115
Target Start/End: Complemental strand, 32354264 - 32354211
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggg 115  Q
    |||||||||| | |||||||| ||||||||| ||||| ||||||||||||||||    
T  32354264 taaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggg 32354211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 112 - 219
Target Start/End: Original strand, 22907913 - 22908014
Alignment:
Q  112 aggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcac 211  Q
    ||||||||||||||||  |||||||| || ||| ||||    || ||||||||||||||||| | |||||| ||||||| |||| || | ||||||||||    
T  22907913 aggggtcccaccattt--ggtgtattgtatgcaacctt----actctgtttttacacaagaggctgtttcttggacttgaacccttgacctttcagtcac 22908006  T
Q  212 atgacaac 219  Q
    || |||||    
T  22908007 ataacaac 22908014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 70 - 128
Target Start/End: Original strand, 4654421 - 4654479
Alignment:
Q  70 cagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 128  Q
    ||||| ||||||| ||||||||| |||| ||||||| || |||||| ||||||||||||    
T  4654421 cagcttggtgcactaaagctcccgcatatgcagggttcgagaagggatcccaccatttt 4654479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 22187329 - 22187263
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| | ||||| |||||||  ||| ||| | ||||||||| |||||||||||||||    
T  22187329 tttttacacaagaggctgtttccaggacttaaaccggtgacctttcagtcaaatgacaacaacttta 22187263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 115
Target Start/End: Complemental strand, 13774998 - 13774949
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggg 115  Q
    |||| ||| |||||||| ||||||||| |||||||||||||||| |||||    
T  13774998 agggtagcccggtgcactaaagctcccgcatacgcagggtccggaaaggg 13774949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 63 - 124
Target Start/End: Original strand, 24903695 - 24903756
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    |||||| |||| ||||||||||||| |||| | || |||| ||||||||||||||| |||||    
T  24903695 aaaaggacagcccggtgcaccaaagttcccgcgtatgcagtgtccgggaaggggtctcacca 24903756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 231
Target Start/End: Original strand, 28208240 - 28208269
Alignment:
Q  202 tttcagtcacatgacaacaactttatcatt 231  Q
    ||||||||||||||||||||||||||||||    
T  28208240 tttcagtcacatgacaacaactttatcatt 28208269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 39079755 - 39079823
Alignment:
Q  68 ggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 137  Q
    |||||| | |||||| ||| |||||  |||| || |||||||||||||||||||||| ||||||||||||    
T  39079755 ggcagccctgtgcactaaaactcccgtatacacatggtccgggaaggggtcccacca-ttttggtgtatt 39079823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 42924841 - 42924917
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggt--ccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| |||||| || ||||||||||||  | |||||||| | ||| ||||||||||||||| |||||| ||||    
T  42924841 cggtgcactaaagcttccgcatacgcagggtgtctgggaagggattccatcatttttggtgtattgtacgcaacctt 42924917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 10634254 - 10634314
Alignment:
Q  177 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||||||||| |||| || | |||||||||| |||||||||||| | | ||||||||    
T  10634254 gtttctaggacttgaacccatgacctttcagtcacttgacaacaacttcaccgttgcgcca 10634314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 234
Target Start/End: Original strand, 12622192 - 12622224
Alignment:
Q  202 tttcagtcacatgacaacaactttatcattgcg 234  Q
    |||||||||| ||||||||||||||||||||||    
T  12622192 tttcagtcacgtgacaacaactttatcattgcg 12622224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 24313570 - 24313645
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggt-ccgggaaggggtcccaccatttttggtgtatt 137  Q
    |||||||||||| |||||||| |||||| |  ||||| || ||  ||||||||||||||||||| ||||||||||||    
T  24313570 taaaagggcagcccggtgcactaaagctacagcatacacatggcgccgggaaggggtcccacca-ttttggtgtatt 24313645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 137
Target Start/End: Original strand, 24355907 - 24355982
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggt-ccgggaaggggtcccaccatttttggtgtatt 137  Q
    |||||||||||| |||||||| |||||| |  ||||| || ||  ||||||||||||||||||| ||||||||||||    
T  24355907 taaaagggcagcccggtgcactaaagctacagcatacacatggcgccgggaaggggtcccacca-ttttggtgtatt 24355982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 30006449 - 30006397
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||| ||||||||| |||||  |||  ||||||||||||||||||||||    
T  30006449 cggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccattt 30006397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 224
Target Start/End: Original strand, 34074653 - 34074717
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactt 224  Q
    |||||||||||||| | |||||||||||||| ||  ||| | |||||||||  ||||||||||||    
T  34074653 tttttacacaagaggctgtttctaggacttgaacttgtgacctttcagtcatgtgacaacaactt 34074717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 39079882 - 39079934
Alignment:
Q  185 gacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||| ||||||| | |||| |||||||||||||||||||| | ||||||||    
T  39079882 gacttgaacccgtgacctttctgtcacatgacaacaactttaccgttgcgcca 39079934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 87; Significance: 8e-42; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 63 - 221
Target Start/End: Original strand, 29355854 - 29356009
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||||||    
T  29355854 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgttt 29355949  T
Q  163 -ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaa 221  Q
     ||||||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||    
T  29355950 cttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaa 29356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 12221913 - 12222074
Alignment:
Q  63 aaaagggcagctcggtgcaccaaa-gctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    ||||||||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  12221913 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 12222008  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| | ||||| | |||||| ||||||| | |||||||||||||||||||||||||    
T  12222009 ttttacacaagaggctgtttccaagacttgaacccgtgacctttcagtcacatgacaacaacttta 12222074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 9161260 - 9161101
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| |  ||||||| |||||| || ||||||||||||||| ||||||||||||||||| ||| |||||| ||||||||||    ||| ||||||    
T  9161260 aaaagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagcct----tactctgttt 9161165  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||    
T  9161164 ttacacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 9161101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 1354755 - 1354912
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| |    
T  1354755 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-t 1354847  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||    
T  1354848 tttacacaagaggctgtttccaggacttgaaccagtgacctttcagtcacatgacaacaacttta 1354912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 1347098 - 1346942
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| ||    
T  1347098 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-tt 1347006  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||| | | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  1347005 ttacacaagtggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 1346942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 2166409 - 2166569
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-t 161  Q
    ||||||||| | |||||||| |||||||||  |||   |||||||||||||||||||||||||| |||||||||| |||||| |||    || ||||| |    
T  2166409 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaacct----tatcctgtat 2166504  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||   ||||| |||||||| ||||||| | |||||||||||| ||||||||||||    
T  2166505 tttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaacttta 2166569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 2178042 - 2178202
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-t 161  Q
    ||||||||| | |||||||| |||||||||  |||   |||||||||||||||||||||||||| |||||||||| |||||| |||    || ||||| |    
T  2178042 aaaagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaacct----tatcctgtat 2178137  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||   ||||| |||||||| ||||||| | |||||||||||| ||||||||||||    
T  2178138 tttacacaagaggttgtttccaggacttgaacccgtgacctttcagtcacataacaacaacttta 2178202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 62 - 145
Target Start/End: Complemental strand, 12886050 - 12885967
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 145  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||| |||||||||||||||||||||| ||||||| |||||||    
T  12886050 taaaagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 12892145 - 12892064
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 144  Q
    ||||||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||||||    
T  12892145 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattatacgca 12892064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 13904984 - 13905147
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-ta 165  Q
    ||||||| |||||||| |||||||| | ||||||||||| |||||| |||||| |||||||  |||| ||| || ||||||||    |||||||||| ||    
T  13904984 gggcagcccggtgcac-aaagctccgtgatacgcagggttcgggaaagggtcc-accattt--ggtgaattgtatgcagcctt----accctgtttttta 13905075  T
Q  166 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||||||  |||||  ||||||||  |||||| | ||||||||||||||||||||||||| | ||||||||    
T  13905076 cacaagaggtcgttttcaggacttgagcccgtgacctttcagtcacatgacaacaactttaccgttgcgcca 13905147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 64 - 149
Target Start/End: Original strand, 7947371 - 7947455
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||||   |||||| ||||||||| |||||||| |||||||||||||| ||||||| |||||||||||| |||||||||||    
T  7947371 aaagggcagccaagtgcactaaagctcccacatacgcaaggtccgggaagggggcccacca-ttttggtgtattgtacgcagcctt 7947455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 3815088 - 3815234
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccc-taccctgtttttacacaagag 173  Q
    |||||||| |||||| || |||||| ||||| |||||| ||||||||||||||  |||||||| ||||||| | | || ||     ||||||||||| ||    
T  3815088 cggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccattt--ggtgtattgtacgcagtcgtaccatat----tttttacacaatag 3815181  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  3815182 tctgtttccaggacttgaacccgtgacatttcagtcacatgacaacaacttta 3815234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 126
Target Start/End: Complemental strand, 6808531 - 6808468
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatt 126  Q
    ||||||||| | |||||||| ||||||||| ||||| |||||||||||||||||||||||||||    
T  6808531 aaaagggcaacccggtgcactaaagctcccgcatacacagggtccgggaaggggtcccaccatt 6808468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 62 - 125
Target Start/End: Original strand, 23930125 - 23930188
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 125  Q
    |||||||||| |||||||||| ||||||||| |||| |||||||||| ||||||||||||||||    
T  23930125 taaaagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccat 23930188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 3116140 - 3116202
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 137  Q
    ||||| || ||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  3116140 cggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtatt 3116202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 102 - 226
Target Start/End: Complemental strand, 6024332 - 6024211
Alignment:
Q  102 gggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttggacccgtgtc 200  Q
    |||||||||||| ||||||| |||| |||||||||| ||||||| ||    |||| || |||||||||||||| | |||||||||| ||| | ||||| |    
T  6024332 gggtccgggaagaggtcccatcattattggtgtattgtacgcagtct----taccatgttttttacacaagaggctgtttctaggatttgaaaccgtgac 6024237  T
Q  201 gtttcagtcacatgacaacaacttta 226  Q
     || || |||||||||||||||||||    
T  6024236 cttccaatcacatgacaacaacttta 6024211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 124
Target Start/End: Original strand, 10734905 - 10734965
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    |||||||||| ||||| || ||||||||| ||||||||||||||||||||||| |||||||    
T  10734905 aaagggcagcccggtggactaaagctcccgcatacgcagggtccgggaagggggcccacca 10734965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 13267861 - 13267797
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    ||||||||| | ||||||||  |||||||| |||||||||||||| |||||||||||||||||||    
T  13267861 aaaagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccattt 13267797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 64 - 212
Target Start/End: Complemental strand, 17432483 - 17432332
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccc--taccctgtt 161  Q
    |||||||| | |||||||| ||||||||| ||| | |||| ||||||||  |||| |||||||||| ||||||| ||| ||||||| ||  |||||||||    
T  17432483 aaagggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacccttaccctgtt 17432384  T
Q  162 ttt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcaca 212  Q
    ||| ||||||||    ||||| |||||||| ||| ||| | |||||||||||    
T  17432383 ttttacacaagatgttgtttccaggacttgaacctgtgacctttcagtcaca 17432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 26097294 - 26097210
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||  ||  ||||||||||| |||||||||||    
T  26097294 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttca--tttggtgtattgtacgcagcctt 26097210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 64 - 124
Target Start/End: Complemental strand, 11395895 - 11395836
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    |||||||||| ||||| || ||||||||| |||||||||| ||||||||||||||||||||    
T  11395895 aaagggcagc-cggtggactaaagctcccgcatacgcaggatccgggaaggggtcccacca 11395836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 86 - 226
Target Start/End: Complemental strand, 14553626 - 14553490
Alignment:
Q  86 agctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagagaccgtttctag 184  Q
    ||||||| ||||| |||||||   ||||||||||||||| |||||||||||| ||| ||||||| |||||     |||||||||||||  |  |||| ||    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttacccta----ttttttacacaagaagctatttccag 14553531  T
Q  185 gacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||| ||| ||| | ||| |||||||||||||||||||||    
T  14553530 gacttgaacctgtgaccttt-agtcacatgacaacaacttta 14553490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 24097692 - 24097649
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||| || ||||||||||||||||||||||||||||||||||    
T  24097692 aaagcttccgcatacgcagggtccgggaaggggtcccaccattt 24097649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 149
Target Start/End: Complemental strand, 24734749 - 24734694
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||| ||||||||||||||||||| |||||| |||||| |||||| ||||    
T  24734749 catacgcaggatccgggaaggggtcccaccttttttgttgtattgtacgcaacctt 24734694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 25557859 - 25557775
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||| ||  ||  ||||||||||| |||||||||||    
T  25557859 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttca--tttggtgtattgtacgcagcctt 25557775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 8409287 - 8409221
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| | ||||| |||||||| | ||||| | |||||||||||| ||||||||||||    
T  8409287 tttttacacaagaggcagtttccaggacttgaatccgtgacctttcagtcacattacaacaacttta 8409221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 137
Target Start/End: Original strand, 14975101 - 14975163
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 137  Q
    |||||||| ||| ||||| |||| || |||| |||||||||||||||||||| ||||||||||    
T  14975101 cggtgcactaaaactcccgcatatgcggggttcgggaaggggtcccaccattattggtgtatt 14975163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 14975171 - 14975237
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| | ||||| |||||||| | ||||| | || ||||||||||||||||||||||    
T  14975171 tttttacacaagaggctgtttccaggacttgaatccgtgaccttccagtcacatgacaacaacttta 14975237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 15866041 - 15866194
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt- 164  Q
    |||||| ||| |||||| | || |||| || |||||||||||||||||||||||||||||||  ||||||||  ||||||| ||    |||||||||||     
T  15866041 agggcaactcagtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccattt--ggtgtatt--acgcagcttt----accctgtttttt 15866132  T
Q  165 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||  ||||| | ||||| |||| ||| |||| || | ||||| ||||||| |||||||||||    
T  15866133 acttaagaggctgtttccaggaattgaacccatgacctttcaatcacatgccaacaacttta 15866194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 12063511 - 12063442
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatca 229  Q
    |||||| ||||||| |  ||||||||||||| ||||||| | |||||||| ||||| |||||||||||||    
T  12063511 tttttatacaagaggctatttctaggacttgaacccgtgacctttcagtctcatgataacaactttatca 12063442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 84 - 127
Target Start/End: Complemental strand, 32579540 - 32579497
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    ||||||||| |||| |||||||| ||||||||||||||||||||    
T  32579540 aaagctcccgcatatgcagggtctgggaaggggtcccaccattt 32579497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 12889562 - 12889404
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||||| || ||||| ||||||||| || ||  ||||||||| ||||||||||| |  ||| |||||||| || |||||||    | |||||||||    
T  12889562 aaagggcagcccgatgcactaaagctcccacacacagagggtccggaaaggggtcccatc-gtttaggtgtattgtatgcagcct----tgccctgtttt 12889468  T
Q  164 t-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||||||| | ||||  | |||||| ||| ||| | ||||| |||| ||||||||||||||    
T  12889467 taacacaagaggctgttttcaagacttgaacctgtgacctttcactcacgtgacaacaacttta 12889404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 176 - 226
Target Start/End: Original strand, 33922935 - 33922985
Alignment:
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||||| ||| ||| | ||||||||| |||||||||||||||    
T  33922935 cgtttctaggacttgaacctgtgacttttcagtcaaatgacaacaacttta 33922985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 2755466 - 2755507
Alignment:
Q  108 gggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||  ||||||||||||||||||||| |||||||||||    
T  2755466 gggaaggactcccaccatttttggtgtattgtacgcagcctt 2755507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 64 - 143
Target Start/End: Original strand, 383760 - 383837
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgc 143  Q
    |||||||| | ||||| ||  |||||||| ||||||||||||| | ||||||||||||| |  ||||||||||| |||||    
T  383760 aaagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaa--tttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 202 - 237
Target Start/End: Original strand, 19649300 - 19649336
Alignment:
Q  202 tttcagtcacatgacaacaactttatca-ttgcgcca 237  Q
    |||||||||||||||||||||||||||| ||||||||    
T  19649300 tttcagtcacatgacaacaactttatcagttgcgcca 19649336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 13160836 - 13160680
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| | ||| ||||  |||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    ||||||||||    
T  13160836 aaagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttt 13160743  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||| | |||||||||||||| ||||||| | || ||||||||||||||||||||||    
T  13160742 tacacaagaggctgtttctaggacttgaacccgtgaccttacagtcacatgacaacaacttta 13160680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 39460992 - 39461153
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    |||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||    ||| ||| |    
T  39460992 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagcct----tactctgtt 39461087  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| | ||||| |||||||| ||||||| | |||||||| ||||||||||||||||    
T  39461088 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtctcatgacaacaacttta 39461153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 21070708 - 21070859
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||     | |||||| |||||||     
T  21070708 cggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttatacaagagg 21070807  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  21070808 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 21070859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 20284080 - 20284230
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagag 173  Q
    |||||||| ||| ||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| ||||    | |||||| |||||||    
T  20284080 cggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccct--tttttttttatacaagag 20284177  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  20284178 gctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 20284230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 36720933 - 36720774
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    |||||||||| |  ||||||| |||||| || |||||||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| |    
T  36720933 taaaagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgtt 36720840  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  36720839 ttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 36720774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 28817625 - 28817783
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | || ||||| ||||||||| |||||||||||||||||||||||||||||||  || |||||||| ||||||||||    ||||||| ||    
T  28817625 aaaagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--ttgggtgtattgtacgcagcct----taccctgttt 28817718  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  28817719 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 28817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 35261815 - 35261657
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||| ||||||||||||||||  ||||||||||| |||||| |||    ||||||| ||    
T  35261815 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccacca--tttggtgtattgtacgcaacct----taccctgttt 35261722  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| ||||| ||| |||| ||||||| | || ||||||||||||||||||||||    
T  35261721 tttacacaagagactgtttccagggcttgaacccgtgaccttccagtcacatgacaacaacttta 35261657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 12670261 - 12670405
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| | ||||||| |||| |||||||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||| |||||||||     
T  12670261 cggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttt-acacaagagg 12670353  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  12670354 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 12670405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 65 - 226
Target Start/End: Complemental strand, 45071398 - 45071243
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 164  Q
    ||||||| | ||||||||  |||||||| |||||||| ||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||||||||    
T  45071398 aagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgttttt 45071305  T
Q  165 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||| | ||||| || ||||| ||||||| | || || |||||||||||||||||||    
T  45071304 acacaagaggctgtttccagaacttgaacccgtgaccttacaatcacatgacaacaacttta 45071243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 7136538 - 7136686
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccct-gtttttacacaagag 173  Q
    |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    |||||| |||||||||||||||    
T  7136538 cggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctggtttttacacaagag 7136633  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
       ||||| |||||||| |||| || | || ||||||||||||||||||||||    
T  7136634 gttgtttccaggacttgaacccatgaccttccagtcacatgacaacaacttta 7136686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 30454096 - 30454252
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||  ||||||||||    |||| || ||    
T  30454096 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtatcgtacgcagcct----taccttg-tt 30454188  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  30454189 ttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 30454252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 44781506 - 44781674
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-tttt 164  Q
    |||||||| | |||||| ||||||||| ||||||||||||| |||| ||||||||| ||||||||||||||| ||| ||||||    |||||||| ||||    
T  44781506 agggcagcacagtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagcct----taccctgtctttt 44781601  T
Q  165 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||||   ||||| |||||||| |||||||   |||||||||| |||||||||||||| | ||||||||    
T  44781602 acacaagaggttgtttccaggacttgaacccgtgaactttcagtcacgtgacaacaactttaccgttgcgcca 44781674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 24365078 - 24365217
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--tttttacacaagagaccgttt 180  Q
    |||||||||| |||||||||||||||||||||||||||||||  ||||||||||| | ||||||||    |||||||  |||||||||||||| | ||||    
T  24365078 caaagctcccacatacgcagggtccgggaaggggtcccacca--tttggtgtattgttcgcagcct----taccctgattttttacacaagaggctgttt 24365171  T
Q  181 ctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||| |||| ||||||| | ||| |||||||||||||||||||||    
T  24365172 ctagggcttgaacccgtgacattttagtcacatgacaacaacttta 24365217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 6760960 - 6760800
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||||| |||| || ||||||| ||||||||||||||||| |||||||||| |||| |||||    ||||||| ||    
T  6760960 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagcct----taccctgttt 6760865  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | ||  ||||| |||||||||||||||    
T  6760864 tttacacaagaggctgtttccaggacttgaacccgtgaccttctagtcatatgacaacaacttta 6760800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 75 - 224
Target Start/End: Original strand, 18164771 - 18164914
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| ||||||||| |||||||||||||||||||  |||| || |   ||||||||||| |||||| |||    |||||||||||||||||||||     
T  18164771 cggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatc--ctttggtgtattgtacgcaacct----taccctgtttttacacaagagg 18164864  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactt 224  Q
    | ||||| |||||||| ||||||| | |||||||||||||||||||||||    
T  18164865 ctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactt 18164914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 29521696 - 29521854
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagag 173  Q
    |||||||| ||||||||| ||||||||||||| |||| ||| |||||||||||  |||||||| |||||||||||    ||||||||||| | |||||||    
T  29521696 cggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccattt--ggtgtattgtacgcagcctt----accctgttttttaaacaagag 29521789  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatca-ttgcgcca 237  Q
     | ||||| |||||||| ||||||| | || |||||||| |||||||||||||||| ||||||||    
T  29521790 gctgtttccaggacttgaacccgtgaccttccagtcacacgacaacaactttatcagttgcgcca 29521854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 17823711 - 17823554
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 162  Q
    |||||||| | |||||||| ||||||||  |||| ||||||| ||||||||||| |||||||||  |||||||||||||||| |||    | |||| |||    
T  17823711 aaagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccattt--ggtgtattttacgcagtctt----atcctggttt 17823618  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| | ||||| |||||||| ||||||| | |||| ||||||||||||||||||||    
T  17823617 ttacacaagaggctgtttccaggacttgaacccgtgacctttcggtcacatgacaacaacttta 17823554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 26954272 - 26954110
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-- 159  Q
    |||||||||| | | |||||| ||||||||| |||| ||  |||| ||||||||||||||||||| |||||||||| ||||||||||    |||||||      
T  26954272 taaaagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 26954177  T
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| | ||||| |||||||| ||||||| | ||  | |||||||||||||||||||    
T  26954176 tttttacacaagaggctgtttccaggacttgaacccgtgaccttctaatcacatgacaacaacttta 26954110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 44530286 - 44530127
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    ||||||| || | |||||||| ||||||||| |||||||||||||| ||||||||||||||||  ||||||||||| ||||||||||    ||||||| |    
T  44530286 taaaaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgtt 44530193  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||   ||||| | |||||| ||||||| | ||  |||||||||||| ||||||||    
T  44530192 ttttacacaagaggttgtttccaagacttgaacccgtgaccttctagtcacatgacagcaacttta 44530127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 63 - 186
Target Start/End: Complemental strand, 20870061 - 20869941
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||||| |||| || |||||| |||||||||||||||||| |||||||||| ||||||||||    ||||||| ||    
T  20870061 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgttt 20869966  T
Q  162 tttacacaagagaccgtttctagga 186  Q
    |||||||||||||| ||||| ||||    
T  20869965 tttacacaagagactgtttccagga 20869941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 63 - 198
Target Start/End: Original strand, 5135289 - 5135418
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||||| |||||||| ||||||||  |||||||||||||||||||||||||||||||  ||||||||||| ||| ||||||| ||  | || |||    
T  5135289 aaaagggcagcccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacacagccttacc--ctct-ttt 5135382  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtg 198  Q
    ||||||||||| | ||||| |||||||| |||||||    
T  5135383 ttacacaagaggctgtttccaggacttgaacccgtg 5135418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 87 - 226
Target Start/End: Original strand, 20869523 - 20869653
Alignment:
Q  87 gctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctagga 186  Q
    |||||| |||| |||||||||||||||||||| ||||    |||||||||| ||| |||||||    |||||||||| ||||||||| | ||||| ||||    
T  20869523 gctcccgcatatgcagggtccgggaaggggtctcacc----ttggtgtattgtacacagcctt----accctgtttt-acacaagaggctgtttccagga 20869613  T
Q  187 cttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||| ||||||| | |||||||||||||||||||||||||    
T  20869614 cttgaacccgtgacctttcagtcacatgacaacaacttta 20869653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 2626645 - 2626497
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 175  Q
    |||||||  |||||||| |||| |||||||| |||||||||||||| ||  ||||||||||| ||||||| ||| ||     | |||||||||||||| |    
T  2626645 ggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatca--tttggtgtattgtacgcagtcttaccctgtttttttttacacaagaggc 2626548  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     ||||| |||||||| ||||||| | |||| ||||||||||||||||||||    
T  2626547 tgtttccaggacttgaacccgtgacctttcggtcacatgacaacaacttta 2626497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 25250660 - 25250500
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcc-ttccctaccctgtt 161  Q
    ||||||||| | |||||||| ||| ||||| |||| || |||| |||||||||||||||||||| |||||||||| ||||||||| | |||||     ||    
T  25250660 aaaagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccatacccta----ttt 25250565  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||| || | ||||| |||||||| ||  ||| | || ||||||||||||||||||||||    
T  25250564 tttacacaataggctgtttccaggacttgaacatgtgaccttccagtcacatgacaacaacttta 25250500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 65 - 237
Target Start/End: Original strand, 42083699 - 42083867
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 164  Q
    ||||||||| |  ||||| ||||||||| | ||| |||||| |||||||||||||||||||||| ||| || | ||||||||||| ||   ||  |||||    
T  42083699 aagggcagcccaatgcactaaagctcccacgtacacagggttcgggaaggggtcccaccatttt-ggtatactgtacgcagccttgcc---ccatttttt 42083794  T
Q  165 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||| || | ||||| |||||||| ||||||| | |||||||||| ||||||||| |||| | ||||||||    
T  42083795 acacaaaaggctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaattttaccgttgcgcca 42083867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 84 - 226
Target Start/End: Complemental strand, 24245564 - 24245429
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccattttt-ggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 182  Q
    ||||||||| |||||||||||||| |||||||||||||| |||||| |||| ||| |||| || |||    ||||||||   ||| ||||||| |||||     
T  24245564 aaagctcccgcatacgcagggtccaggaaggggtcccacaattttttggtgcattgtacgtagtctt----accctgtt---acataagagac-gtttcc 24245473  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||| ||||||| | |||||||||||||||||||||||||    
T  24245472 aggacttgaacccgtgacctttcagtcacatgacaacaacttta 24245429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 149
Target Start/End: Complemental strand, 29877227 - 29877146
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||  ||||||| || |||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 29877146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 12626027 - 12625867
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-- 159  Q
    |||||||||| | |||||||| ||||||||| |||||||||||||||||| ||||||||||||  ||||||||||| || |||| ||    |||||||      
T  12626027 taaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccacca--tttggtgtattgtatgcagtct----taccctgtt 12625934  T
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||||   ||||| ||||||||  |||||| | |   ||||||| |||||||||||||    
T  12625933 tttttacacaagaggttgtttccaggacttgagcccgtgacctacaagtcacacgacaacaacttta 12625867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 153 - 226
Target Start/End: Complemental strand, 28407467 - 28407394
Alignment:
Q  153 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  28407467 taccctgtttttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 28407394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 8897763 - 8897921
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtt 161  Q
    ||||||||| |  ||||||  ||||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||| |||||| |||||     ||    
T  8897763 aaaagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgtagccttacccta----ttt 8897856  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||| |   ||||| |||||||  ||||||| | || | ||||||||||||||||||||    
T  8897857 tttacacaagcggttgtttccaggacttcaacccgtgaccttgctgtcacatgacaacaacttta 8897921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 77 - 149
Target Start/End: Original strand, 17250888 - 17250960
Alignment:
Q  77 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||| |||||||| ||||||||||||| |||||| ||||||||||||| |||||||||| ||||| |||||    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgcctt 17250960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 145
Target Start/End: Complemental strand, 16225145 - 16225075
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 145  Q
    |||||||| ||||||||| |||| || |||||||||||||| |||||||||| |||||||||| |||||||    
T  16225145 cggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcag 16225075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 144
Target Start/End: Complemental strand, 16013580 - 16013511
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 144  Q
    |||||||| ||||||||| |||| |||||||| ||||||||||| |||||||||| ||||||| ||||||    
T  16013580 cggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 63 - 120
Target Start/End: Complemental strand, 40444902 - 40444845
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtccc 120  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||| ||||||||||    
T  40444902 aaaagggcagctcggtgcactaaagctccaacatacgcagggtccggcaaggggtccc 40444845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 26102653 - 26102589
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  26102653 aaaagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccattt 26102589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 222
Target Start/End: Complemental strand, 31457309 - 31457155
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    ||||||||||   |||||||| | ||||||| ||||||||||||  |||||||||||| ||||  |||| |||||| ||||||||||    |  ||| ||    
T  31457309 taaaagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctacca--tttgatgtattgtacgcagcct----tttcctatt 31457216  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaac 222  Q
    ||||||||||||   ||||  |||||||| ||||||| | |||||| ||||||||||||||    
T  31457215 tttacacaagaggttgtttacaggacttgaacccgtgacctttcagccacatgacaacaac 31457155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 5689755 - 5689683
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| ||||||||| |||||||| ||| ||||||||||| ||||||  ||||||||||| |||||||||||    
T  5689755 cggtgcactaaagctcccacatacgcatggttcgggaaggggttccacca--tttggtgtattgtacgcagcctt 5689683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 28407538 - 28407475
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||| | |||||||  ||||||||| |||||| |||||||||||||||||||||||||||    
T  28407538 aaagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 27508034 - 27507985
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    |||||||| ||||||||| |||||||||||| ||||||||||||||||||    
T  27508034 cggtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca 27507985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 43942417 - 43942376
Alignment:
Q  108 gggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||||||||||||||||||||||| |||||||||||    
T  43942417 gggaaggggtcccaccatttttggtgtattgtacgcagcctt 43942376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 63 - 127
Target Start/End: Original strand, 35107310 - 35107374
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    ||||||||| | |||||||| |||||| || ||||| ||| ||||||||||||||||||||||||    
T  35107310 aaaagggcaacccggtgcactaaagcttccgcatacacagcgtccgggaaggggtcccaccattt 35107374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 8483949 - 8484021
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||| | ||||||||| ||||||||||||| |||| ||||||||||||   |||||||||| |||||||||||    
T  8483949 cggtgccctaaagctcccgcatacgcagggtctgggatggggtcccacca--attggtgtattgtacgcagcctt 8484021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 221
Target Start/End: Complemental strand, 11748406 - 11748282
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctaggacttgga 192  Q
    |||| ||||| | ||||||||||||| ||||||||| || |||| ||||| | ||    ||||||| |||||||| ||||| | ||||| | |||||| |    
T  11748406 catatgcaggattcgggaaggggtcctaccattttttgtatattgtacgctgtct----taccctgctttttacaaaagaggctgtttccaagacttgaa 11748311  T
Q  193 cccgtgtcgtttcagtcacatgacaacaa 221  Q
    |||||| | ||||||||||||||||||||    
T  11748310 cccgtgacatttcagtcacatgacaacaa 11748282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 105 - 218
Target Start/End: Original strand, 23000260 - 23000365
Alignment:
Q  105 tccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgttt 204  Q
    |||||||||||||||||||||||  |||||||| || | | ||||    ||| |||||||||||||||| | ||||| |||||||  ||||||| | |||    
T  23000260 tccgggaaggggtcccaccattt--ggtgtattgtatggaacctt----accgtgtttttacacaagaggctgtttccaggactt--acccgtgaccttt 23000351  T
Q  205 cagtcacatgacaa 218  Q
    ||||||||||||||    
T  23000352 cagtcacatgacaa 23000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 63 - 113
Target Start/End: Original strand, 27468091 - 27468141
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaag 113  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||||||||    
T  27468091 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaag 27468141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 44742529 - 44742602
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| || |||||| ||| || |||||||  ||||||||||||||| |||||||||||| |||||||||||    
T  44742529 cggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccacca-ttttggtgtattgtacgcagcctt 44742602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 77 - 149
Target Start/End: Complemental strand, 19729462 - 19729392
Alignment:
Q  77 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||| | |||||||  ||| ||||||||||||||||||||||||||  ||||||||||| ||| |||||||    
T  19729462 gtgcactagagctcccgtatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacacagcctt 19729392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 101 - 225
Target Start/End: Complemental strand, 35106022 - 35105902
Alignment:
Q  101 agggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtc 200  Q
    ||||||| ||||| |||||||||||| | |||||||| ||||||||||| |  || || |||| |||||||||   ||||| |||||||| ||||||| |    
T  35106022 agggtccaggaagaggtcccaccattct-ggtgtattgtacgcagccttac--actctctttt-acacaagaggttgtttccaggacttgaacccgtgac 35105927  T
Q  201 gtttcagtcacatgacaacaacttt 225  Q
     |||||| ||| |||||||||||||    
T  35105926 ctttcagccacgtgacaacaacttt 35105902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 149
Target Start/End: Complemental strand, 26457851 - 26457781
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| |||||||||||||||||| |||| ||  |||||||||||||   |||||||||| |||||||||||    
T  26457851 cggtgcactaaagctccctcatacgcaaggtcagg--aggggtcccacca--attggtgtattgtacgcagcctt 26457781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 237
Target Start/End: Original strand, 14018003 - 14018137
Alignment:
Q  99 gcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaagagaccgtttctaggacttggacccgt 197  Q
    ||||||||| ||||| |||||||||| ||| | |||||| ||||||| ||     |||||||||| |||||||||||| ||||| | |||||| |||| |    
T  14018003 gcagggtccaggaagtggtcccaccaatttag-tgtattgtacgcagtctc----accctgttttttacacaagagactgtttccaagacttgaacccat 14018097  T
Q  198 gtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    | | ||||| |||| |||||||||| ||| | ||||||||    
T  14018098 gacctttcaatcacgtgacaacaacattaccgttgcgcca 14018137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 131
Target Start/End: Complemental strand, 18595959 - 18595906
Alignment:
Q  78 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttgg 131  Q
    ||||| ||| ||||| ||||| |||||||||||||||||||| | |||||||||    
T  18595959 tgcactaaaactcccgcatacacagggtccgggaaggggtcctatcatttttgg 18595906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 225
Target Start/End: Original strand, 30962864 - 30962929
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 225  Q
    |||||||||||||| | ||||| |||||||| |  |||| | ||||| ||||||||||||||||||    
T  30962864 tttttacacaagaggctgtttccaggacttgaagtcgtgacctttcaatcacatgacaacaacttt 30962929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 198
Target Start/End: Complemental strand, 389769 - 389649
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt---acacaag 171  Q
    |||||||| ||||||| | ||||||||||||| || ||||| ||||| ||  ||||||||||| |||||| |||    ||||||||||||   |||||||    
T  389769 cggtgcactaaagctctcgcatacgcagggtcaggaaagggatcccatca--tttggtgtattgtacgcaacct----taccctgtttttttgacacaag 389676  T
Q  172 agaccgtttctaggacttggacccgtg 198  Q
    ||   ||||| |||||||| |||||||    
T  389675 agggtgtttccaggacttgaacccgtg 389649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Original strand, 36486567 - 36486627
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 125  Q
    ||||||| | ||| |||| ||||||||  |||||||| ||||||||||| |||||||||||    
T  36486567 aagggcaacccggggcactaaagctcctgcatacgcaaggtccgggaagaggtcccaccat 36486627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 71)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 30395724 - 30395885
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    |||||||||| |||||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  30395724 taaaagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgtt 30395819  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| | ||||| |||||||| ||||||| | ||  |||||||||||||||||||||    
T  30395820 ttttacacaagaggctgtttccaggacttgaacccgtgaccttaaagtcacatgacaacaacttta 30395885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 78 - 231
Target Start/End: Complemental strand, 27201793 - 27201643
Alignment:
Q  78 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt-ttacacaagagacc 176  Q
    ||||| ||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||||||||||    |||||||||| | ||||||||| |     
T  27201793 tgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgtttctgacacaagaggct 27201698  T
Q  177 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcatt 231  Q
    ||||| |||||||| |||| || | ||||||||||||||||||||||||| ||||    
T  27201697 gtttccaggacttgaacccatgacctttcagtcacatgacaacaactttaccatt 27201643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 18944805 - 18944644
Alignment:
Q  63 aaaagggcagctcggtgcaccaaa-gctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    ||||||||| | |||||||| ||| |||||| ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  18944805 aaaagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagcct----taccctgtt 18944710  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||| | ||||| ||| |||| ||| ||| | |||||||||||||||||||||||||    
T  18944709 ttttacacaagaggctgtttccaggccttgaacctgtgacctttcagtcacatgacaacaacttta 18944644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 83 - 237
Target Start/End: Complemental strand, 11596651 - 11596503
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 182  Q
    |||||||||| |||||||||||||| |||||||||||||||||||  |||||||| |||||||||||    ||||||||||||||||||||   ||||||    
T  11596651 caaagctcccgcatacgcagggtccaggaaggggtcccaccattt--ggtgtattatacgcagcctt----accctgtttttacacaagaggttgtttct 11596558  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||| ||||||| | |||||||||||||||| | |||||| | ||||||||    
T  11596557 aggacttgaacccgtgacatttcagtcacatgacagccactttaccgttgcgcca 11596503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 34725096 - 34725253
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||| ||||||| ||||||||||    ||||||| |    
T  34725096 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttagtgtattgtacgcagcct----taccctg-t 34725188  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  34725189 tttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 34725253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 46247952 - 46248110
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||| ||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| ||||||| ||    ||||||| ||    
T  46247952 aaaagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagtct----taccctgttt 46248045  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| | |||||| ||||||| | |||||||||||||||||||||||||    
T  46248046 tttacacaagaggctgtttccaagacttgaacccgtgacatttcagtcacatgacaacaacttta 46248110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 226
Target Start/End: Original strand, 20004088 - 20004249
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    |||||||||| | |||||||| ||||||||| |||| || ||||| ||||||||||||||||||| |||||||||| ||||||||||    |||| || |    
T  20004088 taaaagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagcct----taccttgtt 20004183  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||| |||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  20004184 ttttacacgagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 20004249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 27474440 - 27474282
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    ||||||||||   |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||  ||||||| |||||||| |    | |||||||    
T  27474440 taaaagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--ttcagtgtattgtacgcagctt----tgccctgtt 27474347  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| ||||| | |||||| ||| ||| | |||||||||||||||||||||||||    
T  27474346 tttacacaagagactgtttccaagacttgaacctgtgacctttcagtcacatgacaacaacttta 27474282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 213
Target Start/End: Complemental strand, 10668387 - 10668239
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    |||||||||| | |||||||| ||||||||| ||||||||||| ||||||||||||||||||||| |||||||||| |||||| |||    |||| || |    
T  10668387 taaaagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaacct----taccttgtt 10668292  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacat 213  Q
    ||||||||||||| | ||||| |||||||| ||||||| | ||||||||||||    
T  10668291 ttttacacaagaggctgtttccaggacttgaacccgtgacctttcagtcacat 10668239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 35117765 - 35117925
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcat-acgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-t 161  Q
    |||||| ||| |||||||| ||||||||  ||| ||||||||||||||||||||||||| ||||||||||||||| ||| ||||||    |||||||| |    
T  35117765 aaagggaagcccggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagcct----taccctgtat 35117860  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| |  |||| |||||||| ||||||| | |||||||||| ||||||||||||||    
T  35117861 tttacacaagaggctatttccaggacttgaacccgtgacctttcagtcacgtgacaacaacttta 35117925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 38478281 - 38478437
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||| |||||||| |||||||||  |||||||| |||||||||||    |||||||||    
T  38478281 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccattt--ggtgtattgtacgcagcctt----accctgttt 38478374  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||||||| | |||||||||||||| ||||||| | |||||||||||||||||||| ||||    
T  38478375 t-acacaagaggctgtttctaggacttgaacccgtgacctttcagtcacatgacaacaagttta 38478437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 32632569 - 32632713
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 175  Q
    |||||||  |||||||| |||| |||||||  ||||||||||||||||||||  |||||||| |||||||||||    |||||||||||||||||||| |    
T  32632569 ggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtttttacacaagaggc 32632662  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     ||||| |||||||| ||||||| | ||||||||| |||||||||||||||    
T  32632663 tgtttccaggacttgaacccgtgacctttcagtcatatgacaacaacttta 32632713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 62 - 211
Target Start/End: Complemental strand, 35005285 - 35005139
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    |||||||||| | |||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||    ||||||| |    
T  35005285 taaaagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagcct----taccctgtt 35005190  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcac 211  Q
    ||||||||||||| | ||||  | |||||| ||||||| | ||||||||||    
T  35005189 ttttacacaagaggctgttttcaagacttgaacccgtgacctttcagtcac 35005139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 46991951 - 46991805
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagag 173  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||  || |||||||| ||| ||||||    ||||||| ||||||||||||||    
T  46991951 cggtgcactaaagctcccacatacgcagggtccgggaaggggtcccacca--ttcggtgtattgtacacagcct----taccctgttttttacacaagag 46991858  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
       ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  46991857 gttgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 46991805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 67 - 237
Target Start/End: Original strand, 18724549 - 18724713
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-ta 165  Q
    |||||||| ||||||| ||||||||| |||| | |||||||||||||||||||||  ||||  |||||||| ||| |||||||    |||||||||| ||    
T  18724549 gggcagcttggtgcac-aaagctcccgcatatgtagggtccgggaaggggtcccaagattt--ggtgtattgtacacagcctt----accctgtttttta 18724641  T
Q  166 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||| | ||||| |||||||| ||||||| | ||||||||||||||||||||||||| | ||||||||    
T  18724642 cacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccgttgcgcca 18724713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 47214655 - 47214512
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 175  Q
    ||||||| | ||||||| |||| |||||||| ||||||||||||||||||||  |||||||| |||||| ||||    |||||||||| | |||||||||    
T  47214655 ggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccattt--ggtgtattgtacgcaacctt----accctgttttaa-acaagagac 47214563  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  47214562 tgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 47214512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 14617198 - 14617039
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||| | | |||||||| ||||||||| |||| ||||||||||||||||| |||||||||||  |||||||| |||||| |||| |||    ||||    
T  14617198 taaaagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccattt--ggtgtattgtacgcaaccttacct----tgtt 14617105  T
Q  162 -tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     |||||||||||| | ||||| |||||||| || |||| | |||||||||||||||||||||||||    
T  14617104 atttacacaagaggctgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttta 14617039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 6925259 - 6925101
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtt 161  Q
    |||| |||| |||||||||| ||||||||| ||||||||||| |||||||||||||||||||  || |||||||| | ||||||||| |||||     ||    
T  6925259 aaaaaggcaactcggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccacca--ttcggtgtattgtccgcagccttacccta----ttt 6925166  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| |  |||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  6925165 tttacacaagaggctatttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 6925101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 19414597 - 19414440
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||| | |||||||| | ||||||| |||| ||||||| ||||||||||||||||||  ||||||||||| ||||||||||    || |||| |    
T  19414597 taaaagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccacca--tttggtgtattgtacgcagcct----taacctg-t 19414505  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||| ||||| |  ||||||||||||| ||||||| | ||||||||| |||||||||||||||    
T  19414504 tttacataagaggctctttctaggacttgaacccgtgacctttcagtcatatgacaacaacttta 19414440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 62 - 237
Target Start/End: Original strand, 6983809 - 6983977
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    |||||||||||| |||||||||||||||||  | |||||||||||||| ||||||||||||||  ||||||||||| ||||||    | | |||||||||    
T  6983809 taaaagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccacca--tttggtgtattgtacgca----tacttaccctgtt 6983902  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||  | | ||| | ||||| |||||||| ||| ||| | |||||||||| |||||||||||||| ||||||||||    
T  6983903 ttt-tatacgaggctgtttccaggacttgaacctgtgacctttcagtcacgtgacaacaactttaccattgcgcca 6983977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 226
Target Start/End: Original strand, 18741968 - 18742118
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--tttttacacaaga 172  Q
    |||||||| ||||||| | ||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    |||||||  |||||| |||| |    
T  18741968 cggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagcct----taccctgtttttttatacaaaa 18742063  T
Q  173 gaccgttt-ctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||| |||| | | || ||| |||| || | |||||||||||||||||||||||||    
T  18742064 gactgtttcccaagatttgaacccttgacctttcagtcacatgacaacaacttta 18742118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 23768334 - 23768477
Alignment:
Q  78 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagacc 176  Q
    ||||| ||||||||| ||||||||||||| ||||||| |||||||||  ||||||||||| ||||||||||    ||||||| |||||||||||||| |     
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccacca--tttggtgtattgtacgcagcct----taccctgttttttacacaagaggct 23768427  T
Q  177 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||| | |||||| ||| ||| | || ||||||||||||||||||||||    
T  23768428 gtttccatgacttgaacctgtgaccttacagtcacatgacaacaacttta 23768477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 225
Target Start/End: Complemental strand, 9939624 - 9939463
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaa-ggggtcccaccatttttggtgtattttacgcagccttccctaccctgt 160  Q
    |||||||| | | |||||||| ||||||||| ||||||||||||||| ||| |||||||||||||||||||||||||  ||||| |||    |||| |||    
T  9939624 taaaagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaacct----taccatgt 9939529  T
Q  161 tt-ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 225  Q
    || ||| |||||||   ||||| |||||||| || |||| | ||||||||||||||||||||||||    
T  9939528 ttcttaaacaagaggttgtttccaggacttgaactcgtgacctttcagtcacatgacaacaacttt 9939463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 60 - 226
Target Start/End: Original strand, 41319802 - 41319963
Alignment:
Q  60 cctaaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg 159  Q
    |||||||||||| | | ||||||  || ||||| |||| | ||||| ||||||||||||||| |||||  |||||||| |||||||||||    ||||||    
T  41319802 cctaaaagggcaacccagtgcactgaaactcccgcatatgaagggttcgggaaggggtcccatcattt--ggtgtattgtacgcagcctt----accctg 41319895  T
Q  160 tttt-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||| |||||||||||| ||||| |||||||  ||| ||| | |||||||||||||||||||||||||    
T  41319896 ttttttacacaagagactgtttccaggacttaaacctgtgacctttcagtcacatgacaacaacttta 41319963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 45812548 - 45812704
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| | ||||||| |||| |||||||  |||||||||||||||||  ||||||||||| || |||||||    ||||||  ||||||||||||||    
T  45812548 cggtgcactagagctcccgcatatgcagggtttgggaaggggtcccacca--tttggtgtattgtatgcagcct----taccct-cttttacacaagaga 45812640  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatca-ttgcgcca 237  Q
    | ||||  |||||||| ||| ||| | |||||||||||||||||||||||||||| ||||||||    
T  45812641 ctgttttcaggacttgaacctgtgacctttcagtcacatgacaacaactttatcagttgcgcca 45812704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 2435797 - 2435955
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagag 173  Q
    |||||||| ||||||||| ||| || ||||| ||| |||||||||||||||||| |||||||| ||||||| |||    ||||| ||||| ||||| |||    
T  2435797 cggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccatttt-ggtgtattgtacgcaggctt----accctatttttcacacaggag 2435891  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
     | ||||| |||||||| ||||||| | |||||||||| |||||||||||||| | ||||||||    
T  2435892 gctgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactttaccgttgcgcca 2435955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 4349796 - 4349713
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  4349796 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 4349713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 213
Target Start/End: Original strand, 35253198 - 35253329
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| |||||||||||||     
T  35253198 cggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-ttttacacaagagg 35253290  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacat 213  Q
    | ||||| |||||||| |||||||   ||||||||||||    
T  35253291 ctgtttcgaggacttgaacccgtgatctttcagtcacat 35253329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 42304218 - 42304292
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| ||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||||| ||||    
T  42304218 cggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaacctt 42304292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 45402243 - 45402096
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag-ccttccctaccctgtttttacacaagag 173  Q
    |||||||| ||||||||| ||||||||||||| |||||||||||||||||  ||||||||||| |||||||  |||    ||||||||||||||||||||    
T  45402243 cggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca--tttggtgtattgtacgcagaactt--gaaccctgtttttacacaagag 45402148  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     | ||||| |||||||| ||||||  | || || |||||||||||||||||||    
T  45402147 gctgtttccaggacttgaacccgttaccttcca-tcacatgacaacaacttta 45402096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 63 - 137
Target Start/End: Complemental strand, 50606562 - 50606488
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 137  Q
    ||||||||| | |||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||    
T  50606562 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccatttttggtgtatt 50606488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 237
Target Start/End: Complemental strand, 20036379 - 20036210
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||| ||||| |||||||| ||| ||||  |||||||||||||||||||||||| |||||||||  ||||||||  |||||  ||| ||  |  | | |    
T  20036379 aaaagagcagcccggtgcacaaaa-ctcctgcatacgcagggtccgggaaggggttccaccattt--ggtgtattgaacgcaatcttacc--ctttctct 20036285  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||||||   ||||| |||||||| ||||||| | ||||||||||||||||||||||||| ||||||||||    
T  20036284 ttacacaagagtttgtttccaggacttgaacccgtgacctttcagtcacatgacaacaactttaccattgcgcca 20036210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 94 - 149
Target Start/End: Original strand, 19932783 - 19932838
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  19932783 catacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagcctt 19932838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 66 - 237
Target Start/End: Original strand, 15511150 - 15511319
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatttta--cgcagccttccctaccctg-ttt 162  Q
    |||||||| |||||||| ||||||| | |||||||||||||| ||||||||| |||||| |||||||||||| ||  ||||||||    ||||||| |||    
T  15511150 agggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccacca-ttttggtgtattgtatccgcagcct----taccctgtttt 15511244  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||||||||| | ||||| |||||||  |   ||| | |||||| ||||| |||||||||||| ||||||||||    
T  15511245 ttacacaagaggcggtttccaggacttcaatatgtgacctttcagccacattacaacaactttaccattgcgcca 15511319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 19701730 - 19701571
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||| |||  ||||||| ||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| ||| || |||| || |     |||    
T  19701730 aaaagggtagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccacca-ttttggtgtattgtacccatccttaccaa---gtttt 19701635  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| | ||||  | |||||  ||||||| | ||||||||||| |||||||||||||    
T  19701634 ttacacaagaggctgttttcatgacttaaacccgtgacatttcagtcacacgacaacaacttta 19701571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 66 - 195
Target Start/End: Complemental strand, 22325049 - 22324925
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttta 165  Q
    ||||||||  ||||||| ||||||||| |||||||||||| ||||| ||||  ||||||||||||||||||| || |||||||    |||||||||||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggt-cgggacggggctccaccatttttggtgtattgtatgcagcct----taccctgttttta 22324955  T
Q  166 cacaagagaccgtttctaggacttggaccc 195  Q
    |||||||| | ||||| | |||||| ||||    
T  22324954 cacaagaggctgtttccaagacttgaaccc 22324925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 12126836 - 12126992
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | | |||||| | ||||||| |||| |||||||||||||||||||||||| |  ||||||||||| ||||||||||    ||||||| ||    
T  12126836 aaaagggcaacgcagtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaa--tttggtgtattgtacgcagcct----taccctg-tt 12126928  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||  | ||||| || ||||  ||||||| | ||||| | |||||||||||||||||    
T  12126929 ttacacaagaagctgtttccagaacttaaacccgtgacctttcaattacatgacaacaacttta 12126992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 224
Target Start/End: Complemental strand, 8197202 - 8197046
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||| ||| ||||||||  ||||||||||||||| |||||||||| |||||||  |||||| | |||| ||||||    ||| |||||    
T  8197202 aaaagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccattt--ggtgtactgtacgtagcctt----accatgttt 8197109  T
Q  163 tt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactt 224  Q
    || ||||||||| |  || | |||||||| ||||||| | |||||||||||||||||||||||    
T  8197108 tttacacaagaggcaattaccaggacttgaacccgtgacctttcagtcacatgacaacaactt 8197046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 31442400 - 31442473
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||||||||||| ||||| ||| ||||||||||||||||||||| |||||||||||| |||||| ||||    
T  31442400 cggtgcaccaaagctcccacatacacagtgtccgggaaggggtcccacca-ttttggtgtattgtacgcatcctt 31442473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 17470361 - 17470503
Alignment:
Q  78 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt-tacacaagagacc 176  Q
    ||||| ||||||||| ||||||||||   | |||| ||||||||| ||||| |||||||| |||||||||||    |||||||||| |||||||||| |     
T  17470361 tgcactaaagctcccacatacgcaggt--caggaacgggtcccactatttt-ggtgtattgtacgcagcctt----accctgttttttacacaagaggct 17470453  T
Q  177 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| |||| || |  ||||||||| ||||||||||||||    
T  17470454 gtttctaggacttgaacccatgaccattcagtcacgtgacaacaacttta 17470503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 86 - 226
Target Start/End: Original strand, 25468285 - 25468420
Alignment:
Q  86 agctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttctag 184  Q
    ||||||| ||||||||||||| |||||| ||||| |||||||  |||||||| |||||| ||||    |||||| ||||||||||||||   ||||| ||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccattt--ggtgtattgtacgcaacctt----accctgatttttacacaagaggttgtttccag 25468378  T
Q  185 gacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||| |||| || | ||||| |||||||||||||||||||    
T  25468379 gacttgaacccatgacctttcaatcacatgacaacaacttta 25468420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 237
Target Start/End: Complemental strand, 50812099 - 50811929
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--t 160  Q
    ||||||||||| | |||||  ||||||||| |||||||||||  ||||||||||| |||||| |||||||||||| |||||| |||    |||||||  |    
T  50812099 aaaagggcagcccagtgcattaaagctcccgcatacgcagggcgcgggaaggggt-ccacca-ttttggtgtattgtacgcaacct----taccctgttt 50812006  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||||||||||  | ||||| ||||| ||   ||||| | |||||||||| |||||||||||||| | ||||||||    
T  50812005 ttttacacaagaagctgtttccaggacatgattccgtgacctttcagtcacgtgacaacaactttaccgttgcgcca 50811929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 10378738 - 10378818
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||| |||||||| ||||||||| |||| |||||||||  |||||||||||||||  ||||||||||| |||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccacca--tttggtgtattgtacgcagcctt 10378818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 15505722 - 15505643
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 145  Q
    |||| ||||| ||||||||| ||||||||| |||||||||||| ||||||||||||||||||  ||||||||||| |||||||    
T  15505722 aaaaaggcagttcggtgcac-aaagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcag 15505643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 226
Target Start/End: Original strand, 22930104 - 22930224
Alignment:
Q  99 gcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtg 198  Q
    ||||||||| |||||||||||||||||||  |||||||| | | || ||||    ||||||||||||||||| || | ||||| |||||||| |||| ||    
T  22930104 gcagggtccaggaaggggtcccaccattt--ggtgtattgt-cacaacctt----accctgtttttacacaaaaggctgtttccaggacttgaacccatg 22930196  T
Q  199 tcgtttcagtcacatgacaacaacttta 226  Q
     | |||||||||||||||||||||||||    
T  22930197 acctttcagtcacatgacaacaacttta 22930224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 186
Target Start/End: Original strand, 31382213 - 31382330
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||| ||  ||||||||| |||| ||||||||| ||||||||||||||||  ||||||||||| ||||||||||    || |||||||    
T  31382213 aaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccacca--tttggtgtattgtacgcagcct----tatcctgttt 31382306  T
Q  163 ttacacaagagaccgtttctagga 186  Q
    ||||||||||| | ||||| ||||    
T  31382307 ttacacaagaggctgtttccagga 31382330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 94 - 226
Target Start/End: Complemental strand, 25290300 - 25290164
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccct-accctgttttt-acacaagagaccgt--ttctaggactt 189  Q
    |||| |||| ||| |||||||||||| | ||||||||||||||| ||| || |||| ||| ||||||||||| ||||||||| | ||  ||| | |||||    
T  25290300 catatgcagagtctgggaaggggtcctatcatttttggtgtattgtacacaaccttgccttaccctgttttttacacaagaggctgtgtttccaagactt 25290201  T
Q  190 ggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | || |||| | |||||||||||||||||||||||||    
T  25290200 gaacacgtgacctttcagtcacatgacaacaacttta 25290164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 20999848 - 20999933
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||||| |||||||| ||||||||| | |||||||||| | |||||||| |||| ||  ||||||||||| |||||||||||    
T  20999848 taaaagggcagcccggtgcactaaagctcccgcgtacgcagggtgccggaaggggccccatca--tttggtgtattgtacgcagcctt 20999933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 30555274 - 30555210
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||| |||| |||||||| ||||||| | ||||||||||||||| ||||||||||||||||||    
T  30555274 aaaaggtcagcccggtgcactaaagctctcgcatacgcagggtccgtgaaggggtcccaccattt 30555210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 113 - 226
Target Start/End: Complemental strand, 33223093 - 33222985
Alignment:
Q  113 ggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcaca 212  Q
    |||||||||||||||| |||||||| |||||| |||| ||    ||||||||||||||||| | ||||| | |||||  | ||||| | |||||||||||    
T  33223093 ggggtcccaccatttt-ggtgtattgtacgcaacctttcc----ctgtttttacacaagaggctgtttccatgacttaaatccgtgacctttcagtcaca 33222999  T
Q  213 tgacaacaacttta 226  Q
    ||||||||||||||    
T  33222998 tgacaacaacttta 33222985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 44485128 - 44485266
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttttacacaagagaccgtttc 181  Q
    |||||||||| |||||| ||| ||||||||||||||| ||||  ||||||||||| ||||||||||    |||| ||| ||||||||||| |   |||||    
T  44485128 caaagctcccgcatacgtaggatccgggaaggggtccaacca--tttggtgtattgtacgcagcct----taccatgtcttttacacaagtggttgtttc 44485221  T
Q  182 taggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     ||||||   ||||||| | ||||| |||||||||||||||||||    
T  44485222 caggactataacccgtgacctttcaatcacatgacaacaacttta 44485266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 1517310 - 1517394
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||| | |||||||| ||||||||  ||||||||||||| | |||||||||||||||   |||||||||| |||||||||||    
T  1517310 aaaagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccacca--attggtgtattgtacgcagcctt 1517394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 23796624 - 23796540
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||||| |||||||| ||||||||  |||| |||||||| ||||||||||| |||||  ||||||||||| |||||| ||||    
T  23796624 aaaagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcacca--tttggtgtattgtacgcaacctt 23796540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 43768298 - 43768214
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||||| |||||||  |||||||||  |||||||||||| |||||||||||||||||   |||||||||| || ||||||||    
T  43768298 aaaagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccacca--attggtgtattgtaggcagcctt 43768214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 124
Target Start/End: Original strand, 33594129 - 33594191
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    |||||||| ||| | |||||| ||||||||| ||||||||||||| |||||||||||||||||    
T  33594129 taaaagggtagcccagtgcactaaagctcccgcatacgcagggtctgggaaggggtcccacca 33594191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 63 - 225
Target Start/End: Complemental strand, 22327255 - 22327101
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    |||| |||||| |||||||||||||||||| ||||| ||| || ||||||     ||||||||||| |||| ||  ||| |||||||    |||||||||    
T  22327255 aaaaaggcagcccggtgcaccaaagctcccgcatacacagagttcgggaac----cccaccatttt-ggtgcatcgtacacagcctt----accctgttt 22327165  T
Q  163 tt-acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 225  Q
    || |||||||||   ||||| |||||||| ||||| | | ||||||||||||||||||||||||    
T  22327164 tttacacaagaggttgtttccaggacttgaacccgcgacctttcagtcacatgacaacaacttt 22327101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 4587574 - 4587626
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    ||||||||  |||||||| |||| |||||||||||||||||||||||||||||    
T  4587574 cggtgcactgaagctcccgcataggcagggtccgggaaggggtcccaccattt 4587626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 30682951 - 30682907
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||||| |||||||| |||||||||||||||||||||||||    
T  30682951 caaagctcccgcatacgcacggtccgggaaggggtcccaccattt 30682907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 19974072 - 19974158
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||||| | |||||| ||||||||| |||||  || ||||||||| |||||||| || |||||||||||| |||||| ||||    
T  19974072 taaaagggcagccccgtgcactaaagctcccgcatacatagagtccgggaatgggtcccatca-ttttggtgtattgtacgcaacctt 19974158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 67 - 149
Target Start/End: Original strand, 39214961 - 39215042
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||| |||||||| |||||| || ||||||||||||  ||||||||| ||||||| ||||||  |||| |||||||||||    
T  39214961 gggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccacca-ttttggaatattgtacgcagcctt 39215042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 137
Target Start/End: Original strand, 45264411 - 45264471
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 137  Q
    ||||||| ||||||||| |||| |||||||| | ||||||||||||||| ||||||||||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccacca-ttttggtgtatt 45264471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 50760288 - 50760394
Alignment:
Q  128 ttggtgtattttacgcagccttccctaccctgtttt-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||| |||||||||||    |||| ||||| |||||||||| | ||||  |||||||| ||||||| | | |||||||||||||||| ||||||    
T  50760288 ttggtgtattatacgcagcctt----acccagttttatacacaagaggctgttttcaggacttgaacccgtgacctctcagtcacatgacaactacttta 50760383  T
Q  227 tcattgcgcca 237  Q
     | ||||||||    
T  50760384 cctttgcgcca 50760394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Complemental strand, 6358250 - 6358199
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagc 146  Q
    ||||||||||||| ||||||||||||||||| ||||||||| || ||||||||    
T  6358250 catacgcagggtctgggaaggggtcccacca-ttttggtgttttgtacgcagc 6358199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 150 - 237
Target Start/End: Original strand, 25554803 - 25554890
Alignment:
Q  150 ccctaccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||||| ||||| ||||||||||   ||||| |||||||  || |||| | ||| |||||| |||||||||||||| ||||||||||    
T  25554803 ccctaccgtgtttctacacaagaggttgtttccaggacttaaacacgtggccttttagtcacgtgacaacaactttaccattgcgcca 25554890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 35019388 - 35019305
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||| |||||| |||||||| ||||||| | ||||||||||||| ||| |||||||||||||   |||||||||| || ||||||||    
T  35019388 aaaatggcagcccggtgcactaaagctctcgcatacgcagggtctggg-aggggtcccacca--attggtgtattgtatgcagcctt 35019305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 226
Target Start/End: Complemental strand, 40424786 - 40424743
Alignment:
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||| ||||||| | |||||||||||||||||||||||||    
T  40424786 aggacttgaacccgtggcctttcagtcacatgacaacaacttta 40424743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 2435984 - 2436050
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||| |||   ||||| |||||||| ||||||| | |||||||||| ||||||||||||||    
T  2435984 tttttacacaggaggttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaacttta 2436050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 25554742 - 25554796
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtc 118  Q
    |||||||||  |||||||| || |||||| |||||||||||| ||||||||||||    
T  25554742 aaagggcagtccggtgcactaatgctcccgcatacgcagggttcgggaaggggtc 25554796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 122
Target Start/End: Original strand, 3060003 - 3060031
Alignment:
Q  94 catacgcagggtccgggaaggggtcccac 122  Q
    |||||||||||||||||||||||||||||    
T  3060003 catacgcagggtccgggaaggggtcccac 3060031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 119
Target Start/End: Complemental strand, 16120875 - 16120819
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcc 119  Q
    |||||||||||  ||||||  ||||||||| |||| |||||| ||||||||||||||    
T  16120875 aaaagggcagcctggtgcattaaagctcccgcatatgcaggggccgggaaggggtcc 16120819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 63 - 111
Target Start/End: Original strand, 50760239 - 50760287
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccggga 111  Q
    ||||||||||| |||||||  ||||||||| |||||||||||| |||||    
T  50760239 aaaagggcagcccggtgcattaaagctcccgcatacgcagggttcggga 50760287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 80; Significance: 1e-37; HSPs: 81)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 5648394 - 5648237
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | | ||||||  |||||||| ||||||||||||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||    
T  5648394 aaaagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttt 5648301  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  5648300 ttacacaagaggctgtttccaggacttgaacccgtgaccttacagtcacatgacaacaacttta 5648237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 65 - 226
Target Start/End: Original strand, 6430627 - 6430782
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt 164  Q
    ||||||| | |||||| | ||||||||| |||||||||||||||||||| |||||||||||||  |||||||| |||||||||||    |||||||||||    
T  6430627 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccattt--ggtgtattgtacgcagcctt----accctgttttt 6430720  T
Q  165 acacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||| | ||||| | |||||| ||||||| | |||||||||||||||||||||||||    
T  6430721 acacaagaggctgtttccatgacttgaacccgtgacctttcagtcacatgacaacaacttta 6430782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 62 - 226
Target Start/End: Complemental strand, 16911701 - 16911540
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-t 160  Q
    |||||||||| | ||||  || ||||||||| | ||||||||||||||||||||||||||||||| |||||||||| ||||||||||    ||||||| |    
T  16911701 taaaagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagcct----taccctgat 16911606  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    || |||||||||| | |||||||||||||| ||||||| | ||| |||||||||||||||||||||    
T  16911605 ttgtacacaagaggctgtttctaggacttgaacccgtgacctttaagtcacatgacaacaacttta 16911540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 63 - 237
Target Start/End: Complemental strand, 54175201 - 54175031
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtcc-gggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtt 161  Q
    ||||||||||| |||||||| ||||||||| |||| ||||||||| ||||||||||||||||| |||||||||||| ||||||||||    |||||||||    
T  54175201 aaaagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccacca-ttttggtgtattgtacgcagcct----taccctgtt 54175107  T
Q  162 tttacacaagagaccg-tttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||||||| | | |||| |||||||| | ||||| | ||||||||||||||||||||| ||||| ||||||||    
T  54175106 tttacacaagaggctgttttccaggacttgaatccgtgacatttcagtcacatgacaacaac-ttatcgttgcgcca 54175031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 44363130 - 44363289
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 162  Q
    |||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||  || |||||||    |||||||||| |||    
T  44363130 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcag----ccctaccctgtttt 44363225  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||| ||| | ||||  |||||||| || |||| | |||||||||||||||||||||||||    
T  44363226 ttacacacgaggctgttttcaggacttgaactcgtgacctttcagtcacatgacaacaacttta 44363289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 16408600 - 16408760
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||||| |||| || |||||||||||||||| |||||||| |||||||||| ||||||| ||    ||||||| ||    
T  16408600 aaaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtct----taccctgttt 16408695  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||||| |||||||| ||||||| | || ||||||||||||||||||||||    
T  16408696 tttacacaagaggctgtttccaggacttgaacccgtgaccttccagtcacatgacaacaacttta 16408760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 30639515 - 30639358
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | | |||||| ||||||||| |||| |||||||||||||||||||| ||||||||  |||||||| |||||||||||    |||||||||    
T  30639515 aaaagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccattt--ggtgtattgtacgcagcctt----accctgttt 30639422  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| | ||||| |||||||| ||| ||| | ||||||||||| |||||||||||||    
T  30639421 ttacacaagagtctgtttccaggacttgaaccagtgacctttcagtcacaagacaacaacttta 30639358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 74 - 226
Target Start/End: Complemental strand, 54730377 - 54730227
Alignment:
Q  74 tcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaaga 172  Q
    ||||||||| ||||||||| |||||||||||||||||||||||| ||| |||| |||||||||| |||||||||||  ||||   | |||||||||||||    
T  54730377 tcggtgcactaaagctcccgcatacgcagggtccgggaaggggttccatcattattggtgtattatacgcagccttatccta---tttttttacacaaga 54730281  T
Q  173 gaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | | |||||||||||||| ||||||| | |||  ||||||||||||||||||||    
T  54730280 ggctgtttctaggacttgaacccgtgaccttttggtcacatgacaacaacttta 54730227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 30352579 - 30352748
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--- 159  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||| || | |||||||       
T  30352579 aaaagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcagctttacttaccctgttt 30352678  T
Q  160 ---tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
       |||||||||||||| | ||||| ||||||   ||||||| | |||| ||||| ||||||||||||||    
T  30352679 ttttttttacacaagaggctgtttccaggactctaacccgtgacctttcggtcacttgacaacaacttta 30352748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 40915952 - 40915807
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    ||||||||  |||||||| |||||||||||||||||||||| |||||||||||  |||||||| ||||||||||| |||    ||||||||||||||||     
T  40915952 cggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccattt--ggtgtattgtacgcagccttacct----tgtttttacacaagagg 40915859  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||| |||||||| ||||||| | ||  |||||||||||||||||||||    
T  40915858 ctgtttccaggacttgaacccgtgaccttatagtcacatgacaacaacttta 40915807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 47528529 - 47528685
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||| ||||  ||||||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||    
T  47528529 aaaagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttt 47528622  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||||||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||    
T  47528623 t-acacaagaggctgtttccaggacttgaacctgtgacctttcagtcacatgacaacaacttta 47528685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 48598824 - 48598980
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||  |||| ||| |||||||||||||||||||||||||  |||||||| |||||||||||    |||||||||    
T  48598824 aaaagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgttt 48598917  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||||||| | ||||| |||||||| ||||||| | |||||||||||||||||||||||||    
T  48598918 t-acacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaacaacttta 48598980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 226
Target Start/End: Complemental strand, 20225117 - 20224962
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| |||    
T  20225117 aaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-ttt 20225025  T
Q  164 tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||   ||||| |||||||| |||| || | |||||||||||||||||||||||||    
T  20225024 tacacaagaggttgtttccaggacttgaacccatgacctttcagtcacatgacaacaacttta 20224962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 94 - 226
Target Start/End: Original strand, 5306694 - 5306820
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggac 193  Q
    ||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||    |||||| ||||||||||||| | ||||| |||||||| ||    
T  5306694 catacgcagggtccgggaaggggtcccaccattt--ggtgtattgtacgcaacctt----accctgattttacacaagaggctgtttccaggacttgaac 5306787  T
Q  194 ccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||| | |||||||||||||||| ||||||||    
T  5306788 ccgtgacctttcagtcacatgacatcaacttta 5306820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 23501925 - 23501771
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||||| |||| |||||||||||||||||||||||||||| |||||||||| |||||| |||    ||||||| ||    
T  23501925 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaacct----taccctgttt 23501830  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| | ||      |||||| ||||||| | |||||||||||||||||||||||||    
T  23501829 tttacacaagaggctgt------gacttgaacccgtgacctttcagtcacatgacaacaacttta 23501771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 11054147 - 11054303
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||| || ||||||  |||||||| ||||||| |||    |||||||||    
T  11054147 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccattt--ggtgtattgtacgcagtctt----accctgttt 11054240  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | ||||||||||| ||||  |||||||| ||||||| | |||||||||||||||||||||||||    
T  11054241 t-acacaagagactgttttcaggacttgaacccgtgacctttcagtcacatgacaacaacttta 11054303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 132
Target Start/End: Original strand, 47482848 - 47482918
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggt 132  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  47482848 taaaagggcagctcgttgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggt 47482918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 187
Target Start/End: Original strand, 20639657 - 20639777
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||| ||||||||||    ||||||| ||    
T  20639657 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca-ttttggtgtattgtacgcagcct----taccctgttt 20639751  T
Q  162 tttacacaagagaccgtttctaggac 187  Q
    |||||||||||| | ||||| |||||    
T  20639752 tttacacaagaggctgtttccaggac 20639777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 75 - 226
Target Start/End: Complemental strand, 21647090 - 21646942
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtttttacacaagag 173  Q
    |||||||| ||||||||| |||| || ||||| ||||||||||||||||||| ||||| |||| ||||||||||| |||||     ||||||||||||||    
T  21647090 cggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttacccta----ttttttacacaagag 21646995  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     | ||||| |||||||| ||| ||| | || ||||||||||||||||||||||    
T  21646994 gctgtttccaggacttgaacctgtgaccttccagtcacatgacaacaacttta 21646942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 35567306 - 35567148
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||||| |||||||| ||||||||| || ||||||||| ||||||||||||||||||  |||||||| || ||| ||||||    ||||||| ||    
T  35567306 aaaagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccacca--tttggtgtgttgtacacagcct----taccctgttt 35567213  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||| | | ||||| | |||||| |||| || | ||||||| |||||||||||||||||    
T  35567212 tttacacaagtggctgtttccaagacttgaacccatgacctttcagttacatgacaacaacttta 35567148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 67 - 237
Target Start/End: Complemental strand, 25343321 - 25343154
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttttta 165  Q
    |||||||  ||||| | ||||||| | |||||||||| ||  ||||||||||| ||| ||||||||||||| ||||||||||    ||||||| ||||||    
T  25343321 gggcagccgggtgctctaaagctctcacatacgcaggatctaggaaggggtccaaccctttttggtgtattgtacgcagcct----taccctgtttttta 25343226  T
Q  166 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||||||||  |||| || ||||| ||| ||| | | |||||||| |||||||||||||| ||||||||||    
T  25343225 cacaagagactatttccagaacttgaacctgtgacctatcagtcacgtgacaacaactttaccattgcgcca 25343154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 66 - 212
Target Start/End: Original strand, 29207900 - 29208039
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttta 165  Q
    |||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| |||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-tttta 29207992  T
Q  166 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcaca 212  Q
    |||||||| |  |||| |||||||| ||||||| | |||||||||||    
T  29207993 cacaagaggcaatttccaggacttgaacccgtgacctttcagtcaca 29208039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 84 - 224
Target Start/End: Original strand, 17043414 - 17043549
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgt-ttttacacaagagaccgtttct 182  Q
    ||||||||  |||| |||||||| ||||||||||||||||||||  |||||||| |||||||||||    ||||||| ||||||||||||| | |||||     
T  17043414 aaagctccagcatatgcagggtctgggaaggggtcccaccattt--ggtgtattgtacgcagcctt----accctgtattttacacaagaggctgtttcc 17043507  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaactt 224  Q
    |||||||| ||| ||| | |||||||||| ||||||||||||    
T  17043508 aggacttgaacctgtgacctttcagtcacttgacaacaactt 17043549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 20225211 - 20225126
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| | |||||||| ||||||||| |||| || ||||||||||||||||||||||||| |||||||||| |||||||||||    
T  20225211 aaagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagcctt 20225126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 63 - 227
Target Start/End: Original strand, 9832312 - 9832469
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | || |||  |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| ||    
T  9832312 aaaagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctg-tt 9832404  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttat 227  Q
    ||||||||||| | ||||  |||||||| ||||||| | ||||||||| || ||||||| |||||    
T  9832405 ttacacaagaggctgttttcaggacttgaacccgtgacctttcagtcagatcacaacaattttat 9832469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 19027972 - 19027818
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagag 173  Q
    |||||||| ||||||||| ||||||||| ||| || |||||||||||||| ||  |||||||| |||||||||||    ||||||||||| ||||||||     
T  19027972 cggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaatt--ggtgtattgtacgcagcctt----accctgttttttacacaagat 19027879  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcg 234  Q
       ||||| |||||||| ||||||| | |||||||||| ||||||||||| || |||||||    
T  19027878 gttgtttccaggacttgaacccgtgacctttcagtcacgtgacaacaactctaccattgcg 19027818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 23580207 - 23580365
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    |||||||||||||||||||| ||||||||| ||||| |||| |||  ||||||||| | ||||||| |||||||  ||||||| ||||||    ||||||    
T  23580207 aaaagggcagctcggtgcactaaagctcccacatacacagg-tccaagaaggggtctcgccatttt-ggtgtatcctacgcagtcttccc----ctgttt 23580300  T
Q  163 t-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | |||||||||| |  ||||||| ||||| ||||||| | |||||||||| ||||||||||||||    
T  23580301 tttacacaagaggctctttctagaacttgaacccgtgacctttcagtcacgtgacaacaacttta 23580365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 75 - 237
Target Start/End: Original strand, 47441541 - 47441698
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagag 173  Q
    ||||| || ||||||||  | ||| |||||||||||||||||||| |||||||  |||||||| ||| |||||||    |||||| |||||||| |||||    
T  47441541 cggtggacgaaagctcctgcttactcagggtccgggaaggggtccaaccattt--ggtgtattgtacacagcctt----accctgatttttacaaaagag 47441634  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    || |||||| ||||||| ||| ||| | |||||||||| |||||||||||||| | ||||||||    
T  47441635 actgtttcttggacttgaacctgtgacctttcagtcacgtgacaacaactttaccgttgcgcca 47441698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 20908635 - 20908720
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||||   |||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||||||| |||||||||||    
T  20908635 aaaagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca-ttttggtgtattgtacgcagcctt 20908720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 63 - 137
Target Start/End: Original strand, 33836486 - 33836560
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtatt 137  Q
    ||||||||| | || ||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  33836486 aaaagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtatt 33836560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 30690176 - 30690340
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccct---g 159  Q
    ||||||||||  ||||||| ||||||||| |||||||||||||||||||||||||||||||   |||||||||| || |||||||| ||||    |        
T  30690176 aaagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--attggtgtattgtatgcagccttaccctgttttttat 30690273  T
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||||| |  |||| |||||||| ||||||| | |||||||||| ||||||| ||||||    
T  30690274 tttttacacaagaggctttttccaggacttgaacccgtgacctttcagtcacttgacaaccacttta 30690340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 51865036 - 51865121
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||||  |||||||  ||||||||| ||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||    
T  51865036 taaaagggcagtccggtgcaataaagctcccgcatacgcagggtccgggaaggggccccacca--tttggtgtattgtacgcagcctt 51865121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 83 - 230
Target Start/End: Original strand, 32478810 - 32478946
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 182  Q
    |||||||||| ||||||| |||||||||||||||||||||||  |||||||||||     ||||||    |||||||||||||||| ||||   |||||     
T  32478810 caaagctcccgcatacgctgggtccgggaaggggtcccacca--tttggtgtatt-----cagcct----taccctgtttttacactagaggttgtttcc 32478898  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaactttatcat 230  Q
    |||||||| ||| ||| | | || ||||||||||||||||||||||||    
T  32478899 aggacttgaacctgtgacctctcggtcacatgacaacaactttatcat 32478946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 65 - 186
Target Start/End: Original strand, 7909281 - 7909397
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccct-catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    ||||||| | || ||||| |||||||||  |||||||||||| ||||||||||||||||||  ||||||||||| |||||| |||    |||||||||||    
T  7909281 aagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcaacct----taccctgtttt 7909374  T
Q  164 tacacaagagaccgtttctagga 186  Q
    |||||||||||| ||||| ||||    
T  7909375 tacacaagagactgtttccagga 7909397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 13256398 - 13256554
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | |||||||| ||||||||| || | || |||| |||||||||||||||| ||| |||||||||| ||||||||||    ||||||| ||    
T  13256398 aaaagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagcct----taccctgttt 13256493  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||||||||| |    || |||||||| |||  || | || ||||||||||||||||||||||    
T  13256494 tttacacaagaggc----tccaggacttgaacctatgaccttccagtcacatgacaacaacttta 13256554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 83 - 218
Target Start/End: Complemental strand, 25463238 - 25463108
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttct 182  Q
    |||||||||| |||| ||||||||||||||||||||||||||  |||||||| || |||||| ||||   | ||   ||||||||||||||   |||||     
T  25463238 caaagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtgttgtacgcaacctt---tcccagttttttacacaagaggttgtttcc 25463144  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaa 218  Q
    |||||||| ||||||| | |||||||||||||||||    
T  25463143 aggacttgaacccgtgacctttcagtcacatgacaa 25463108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 64 - 126
Target Start/End: Original strand, 38755908 - 38755970
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatt 126  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  38755908 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 198
Target Start/End: Complemental strand, 47444093 - 47443963
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tt 161  Q
    ||||||||| | | ||||||  |||||||  |||| ||||||||||||||||||||||||||  ||||||||||| ||||||||||    ||||||| ||    
T  47444093 aaaagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcct----taccctgttt 47444000  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtg 198  Q
    ||||| |||||| | ||||| |||||||| |||||||    
T  47443999 tttacgcaagaggctgtttccaggacttgaacccgtg 47443963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 11394987 - 11394924
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  11394987 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11394924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 64 - 127
Target Start/End: Complemental strand, 11404714 - 11404651
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||| | |||||||| ||||||||| |||||||||||||||| |||||||||||||||||    
T  11404714 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccggaaaggggtcccaccattt 11404651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 63 - 149
Target Start/End: Complemental strand, 25629185 - 25629101
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||||| | |||||||| ||||||||| |||| | ||||||||||||||||||||||||  ||||||||||| ||| |||||||    
T  25629185 aaaagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccacca--tttggtgtattgtacacagcctt 25629101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 74 - 225
Target Start/End: Original strand, 30496332 - 30496476
Alignment:
Q  74 tcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagag 173  Q
    ||||||||| |||||||| ||||| ||| |||||||||||| ||||| |||  ||||||||||| || |||||||    ||||| || ||||||||||||    
T  30496332 tcggtgcactaaagctccatcataagcacggtccgggaaggagtcccccca--tttggtgtattgtatgcagcct----taccc-gtgtttacacaagag 30496424  T
Q  174 accgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttt 225  Q
     | ||||| | |||||| || |||| | |||||||||| |||||||||||||    
T  30496425 gctgtttccatgacttgaacacgtgacctttcagtcacgtgacaacaacttt 30496476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 84 - 225
Target Start/End: Original strand, 49938613 - 49938746
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttcta 183  Q
    ||||||||| |||| |||||||  ||||||||||||||||||||| |||||||| ||| |       | ||||| ||||||||||||||| | ||||| |    
T  49938613 aaagctcccgcatatgcagggtatgggaaggggtcccaccatttt-ggtgtattgtacac-------cttaccccgtttttacacaagaggctgtttcca 49938704  T
Q  184 ggacttggacccgtgtcgtttcagtcacatgacaacaacttt 225  Q
    ||||||| ||| ||| | |||||||||| |||||||||||||    
T  49938705 ggacttgaacctgtgacctttcagtcacgtgacaacaacttt 49938746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 63 - 125
Target Start/End: Complemental strand, 32484369 - 32484307
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 125  Q
    ||||||||| | |||||||| ||||||||| |||| |||||||||||||||||||||||||||    
T  32484369 aaaagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccat 32484307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 127
Target Start/End: Complemental strand, 14983971 - 14983906
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||||| |  ||| ||| ||||||||| ||||||||||||||||||||||||||||||||||    
T  14983971 taaaagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccattt 14983906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 64 - 125
Target Start/End: Original strand, 40553937 - 40553998
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat 125  Q
    |||||||| | |||||||| ||||||||| ||||||||||||||||||||||||| ||||||    
T  40553937 aaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcacaccat 40553998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 149
Target Start/End: Complemental strand, 49796911 - 49796849
Alignment:
Q  85 aagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| |||||||||||| ||||||||||||||||||  ||||||||||| |||||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtattgtacgcagcctt 49796849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 20405210 - 20405071
Alignment:
Q  78 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--tttttacacaagagac 175  Q
    ||||| ||||||||| |||| || ||||||||||||||||||||||||| || ||||||| ||||||  ||    |||||||  |||||||||||||| |    
T  20405210 tgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatct----taccctgtttttttacacaagaggc 20405115  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     |||||||||       |||||| | || ||||||||||||||||||||||    
T  20405114 tgtttctagg-------cccgtgaccttccagtcacatgacaacaacttta 20405071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 145
Target Start/End: Complemental strand, 21489210 - 21489143
Alignment:
Q  77 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 145  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||| |||||||| ||| |||||||    
T  21489210 gtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccacca-ttttggtgcattgtacgcag 21489143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 36816383 - 36816466
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcc 147  Q
    ||||||||| | |||| ||| ||||||||| ||||| |||||||| |||||| |||||||| ||||||||||||| |||||||||    
T  36816383 aaaagggcaacccggtacactaaagctcccgcatacacagggtccaggaaggagtcccacc-tttttggtgtattgtacgcagcc 36816466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 38786745 - 38786681
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    ||||||||| | |||||||| | ||||||| |||| |||||||||||||||||||||||||||||    
T  38786745 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccattt 38786681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 75 - 223
Target Start/End: Original strand, 39077807 - 39077948
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagaga 174  Q
    |||||||| | ||||||| |||| ||||||||||| |||  ||| ||||||||  ||| |||| |||||| ||||    |||||||||| |||||||||     
T  39077807 cggtgcactagagctcccgcatatgcagggtccggaaagatgtctcaccattt--ggtatattgtacgcaacctt----accctgtttt-acacaagagg 39077899  T
Q  175 ccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaact 223  Q
    | ||||| |||||||| ||||||| | ||||| ||||||||||||||||    
T  39077900 ctgtttccaggacttgaacccgtgacctttcaatcacatgacaacaact 39077948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 77 - 221
Target Start/End: Original strand, 41018807 - 41018945
Alignment:
Q  77 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagacc 176  Q
    |||||| ||||| ||  |||||||| |||| ||||||||||||||| ||||  |||||||| |||| ||||||    |||||  |||||||||||||       
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactattt--ggtgtattgtacgtagcctt----accctaattttacacaagaggtt 41018900  T
Q  177 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaa 221  Q
    ||||| |||||||| ||||||| | |||||||||| |||||||||    
T  41018901 gtttccaggacttgaacccgtgacctttcagtcacgtgacaacaa 41018945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 153 - 237
Target Start/End: Original strand, 42164232 - 42164316
Alignment:
Q  153 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||||||||||||||||   ||||| | |||||| ||||||| | |||||||||||||||||||| |||| | ||||||||    
T  42164232 taccctgtttttacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaattttaccgttgcgcca 42164316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 50555655 - 50555718
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatt 126  Q
    ||||||||||| |||||||| ||| ||||  |||||||||||||||||||||||| ||||||||    
T  50555655 aaaagggcagcccggtgcactaaaactcctgcatacgcagggtccgggaaggggttccaccatt 50555718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 226
Target Start/End: Complemental strand, 14590881 - 14590815
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||| ||||||| | |||||||||||||| | ||||| | |||||||||||||||||||||||||    
T  14590881 tttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaacttta 14590815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 25388311 - 25388249
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatt 126  Q
    |||||||| | |||||||| |||||||   |||||||||||||||||||||||||||||||||    
T  25388311 aaagggcaacccggtgcactaaagctcatgcatacgcagggtccgggaaggggtcccaccatt 25388249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 226
Target Start/End: Original strand, 487128 - 487292
Alignment:
Q  66 agggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccat-------ttttggtgtattttacgcagccttccctaccct 158  Q
    ||||| || |||||||| ||||||||| ||| |||||  |||||||||||||||| ||||       |||| ||||||| |||||||| || |||    |    
T  487128 agggctgcccggtgcactaaagctcccgcattcgcagaatccgggaaggggtcccgccatcccaccattttagtgtattgtacgcagctttacct----t 487223  T
Q  159 gtttt-tacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||| ||||||||||   ||||| | |||||| ||||||| | |||||||||||||||||||||||||    
T  487224 gttttatacacaagaggttgtttccaagacttgaacccgtgacctttcagtcacatgacaacaacttta 487292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 153 - 226
Target Start/End: Original strand, 17315382 - 17315455
Alignment:
Q  153 taccctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||| ||||||||||||||||   ||||| |||| ||| ||||||| | |||||||||||||||||||||||||    
T  17315382 taccttgtttttacacaagaggttgtttcgaggaattgaacccgtgacctttcagtcacatgacaacaacttta 17315455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 128
Target Start/End: Complemental strand, 36589876 - 36589815
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttt 128  Q
    ||||||| |||||||||||||||||| |||||  ||||| | ||||||||||||||||||||    
T  36589876 gggcagcccggtgcaccaaagctcccgcatacatagggttcaggaaggggtcccaccatttt 36589815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 226
Target Start/End: Complemental strand, 37494972 - 37494829
Alignment:
Q  78 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagacc 176  Q
    ||||| ||||||||  |||||||||||||| | ||||||||||||||  |||||| |||| || ||| |||    ||||||| ||||||||||||||       
T  37494972 tgcactaaagctcctgcatacgcagggtcccgaaaggggtcccacca--tttggtatattgtatgcaacct----taccctgttttttacacaagaggtt 37494879  T
Q  177 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||| |||||||| ||| ||| | |||||||| |||| |||||||||||    
T  37494878 gtttccaggacttgaacctgtgacctttcagtcgcatggcaacaacttta 37494829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 87 - 221
Target Start/End: Original strand, 7385499 - 7385628
Alignment:
Q  87 gctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttttt-acacaagagaccgtttctagg 185  Q
    |||||| ||||| ||||||||||||| ||||||||||||||  ||||||||  || || ||||    ||||| ||||| ||||| ||| | ||||| |||    
T  7385499 gctcccgcatacacagggtccgggaaagggtcccaccattt--ggtgtattgcacacaacctt----accctattttttacacatgaggctgtttccagg 7385592  T
Q  186 acttggacccgtgtcgtttcagtcacatgacaacaa 221  Q
     |||| ||||||| | ||||||||||||||||||||    
T  7385593 gcttgaacccgtgacctttcagtcacatgacaacaa 7385628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 16494343 - 16494272
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagc 146  Q
    |||| ||| |||||| || ||||| ||||||| ||||| |||||||||||||||||||||||| || |||||    
T  16494343 cggtacactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagc 16494272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 84 - 237
Target Start/End: Original strand, 30581485 - 30581635
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg--tttttacacaagagaccgtttc 181  Q
    ||||||||  |||| |||||||||||||||||||||||||| |||||||||||| ||| || |||    |||||||  ||||||||||||||   |||||    
T  30581485 aaagctcctacatatgcagggtccgggaaggggtcccacca-ttttggtgtattgtacacaccct----taccctgtttttttacacaagaggttgtttc 30581579  T
Q  182 taggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
     | |||||| |||| || | ||| ||| |  |||||||||||||| | ||||||||    
T  30581580 cacgacttgaacccttgaccttttagtgatgtgacaacaactttagcgttgcgcca 30581635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 114
Target Start/End: Complemental strand, 35532128 - 35532077
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaagg 114  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||||    
T  35532128 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaagg 35532077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 237
Target Start/End: Complemental strand, 54967151 - 54966988
Alignment:
Q  67 gggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttttta 165  Q
    ||||||| |||||||| ||||||||| |||| | ||||| ||||||||||||||||||  |||||| |||| || ||| |||    ||||||| ||||||    
T  54967151 gggcagcccggtgcac-aaagctcccgcatatgtagggtacgggaaggggtcccacca--tttggtatattgta-gcaacct----taccctgtttttta 54967060  T
Q  166 cacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    ||||||||    |||| || ||||| ||  ||| | ||||||||||||||||||||||||| | ||||||||    
T  54967059 cacaagaggttctttccagaacttgaacatgtgacctttcagtcacatgacaacaactttaccgttgcgcca 54966988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 226
Target Start/End: Original strand, 55766466 - 55766623
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttt 163  Q
    |||||||| | |||||||| ||||||| | |||||||| ||||||||| ||||| ||||||||    ||||||| |||||||||||    |||||||||     
T  55766466 aaagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattca--gtgtattgtacgcagcctt----accctgttta 55766559  T
Q  164 tacacaagagaccgtttctaggacttggaccc-gtgtcgtttcagtcacatgacaacaacttta 226  Q
     |||||||| || ||||| |  ||||| |||| ||| | || | ||||||||||||||||||||    
T  55766560 cacacaagaaactgtttccaaaacttgaaccccgtgaccttccggtcacatgacaacaacttta 55766623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 83 - 226
Target Start/End: Original strand, 3580859 - 3580993
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccct-gtttttacacaagagaccgtttc 181  Q
    |||||||||| |||| ||||||||||||||||||||| | ||  |||||||||||  || ||||||    |||| | |||||||||||||||   |||||    
T  3580859 caaagctcccacatatgcagggtccgggaaggggtcctagca--tttggtgtattgcacacagcct----taccatggtttttacacaagag---gtttc 3580949  T
Q  182 taggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     | |||||| || |||| | |||||||||||||||||||||||||    
T  3580950 ca-gacttgaactcgtgacttttcagtcacatgacaacaacttta 3580993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 219
Target Start/End: Original strand, 32629293 - 32629418
Alignment:
Q  88 ctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggac 187  Q
    ||||| |||||||| |||||||||||||||||| ||| ||| ||||||| | | || |||||    |||||||||||  ||||||| | ||||| ||||     
T  32629293 ctcccacatacgcaaggtccgggaaggggtcccgccaattt-ggtgtatgt-aggcggcctt----accctgtttttttacaagaggctgtttcgaggat 32629386  T
Q  188 ttggacccgtgtcgtttcagtcacatgacaac 219  Q
    ||| ||||||| | ||||||||||||||||||    
T  32629387 ttgaacccgtgacctttcagtcacatgacaac 32629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 84 - 226
Target Start/End: Original strand, 39029080 - 39029218
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagaccgtttct 182  Q
    ||||||||| |||| ||||||||||| ||| |||||||||| |||| ||||||| ||| ||||||    ||||||| |||||||||||||| | |||||     
T  39029080 aaagctcccgcatatgcagggtccggaaagtggtcccacca-ttttcgtgtattgtacacagcct----taccctgttttttacacaagaggctgtttcc 39029174  T
Q  183 aggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    | | |||| |||  || | ||| ||||||| |||||||||||||    
T  39029175 aaggcttgaacctatgaccttttagtcacacgacaacaacttta 39029218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 63 - 124
Target Start/End: Complemental strand, 19028047 - 19027986
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccacca 124  Q
    ||||||||||| |||||||| ||||||||| |||| |  ||||||||||||| |||||||||    
T  19028047 aaaagggcagcccggtgcactaaagctcccgcataagtggggtccgggaaggagtcccacca 19027986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 44718682 - 44718641
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccat 125  Q
    ||||||||| ||||||||||||| ||||||||||||||||||    
T  44718682 aaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 127
Target Start/End: Complemental strand, 28494287 - 28494223
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||| |||||| |||||||| | ||||||| |||| ||||| || ||||||||||||||||||||    
T  28494287 aaaaaggcagcccggtgcactagagctcccgcatatgcaggatctgggaaggggtcccaccattt 28494223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 65 - 149
Target Start/End: Original strand, 8473621 - 8473705
Alignment:
Q  65 aagggcagctcggtgcaccaaagctccctcatacgcaggg-tccggg-aaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    ||||||| | |||||||| ||||||||| |||| |||||| |||||| ||||||||||||||  ||||||||||| || ||||||||    
T  8473621 aagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccacca--tttggtgtattgtatgcagcctt 8473705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 149
Target Start/End: Original strand, 9987833 - 9987917
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||| |||||| |||||||  ||||||||| |||| ||| ||||  ||||||||||||||||  ||||||||||| || ||||||||    
T  9987833 aaaaaggcagcccggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccacca--tttggtgtattgtatgcagcctt 9987917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 216
Target Start/End: Complemental strand, 7038189 - 7038041
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgt 160  Q
    |||||||||| | | |||||| |||||||| | |||||||||||||||| ||| | ||||||| |||||||||||| |||| || ||| |||||     |    
T  7038189 taaaagggcaacccagtgcactaaagctccgt-atacgcagggtccgggtaggtgccccacca-ttttggtgtattgtacgaagtcttacccta----tt 7038096  T
Q  161 ttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgac 216  Q
    ||||||||||||  | ||||| |||||||| ||| ||| | |||||||||||||||    
T  7038095 ttttacacaagaagctgtttc-aggacttgaacctgtgacctttcagtcacatgac 7038041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 2813242 - 2813181
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcag 145  Q
    ||||||||| ||||||||  || |||||| ||||||||||||| ||| |||||| |||||||    
T  2813242 aaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgcag 2813181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 95 - 144
Target Start/End: Original strand, 35894492 - 35894540
Alignment:
Q  95 atacgcagggtccgggaaggggtcccaccatttttggtgtattttacgca 144  Q
    ||||||| | |||||||||||||||||||| |||||||||||| ||||||    
T  35894492 atacgcatgatccgggaaggggtcccacca-ttttggtgtattgtacgca 35894540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 237
Target Start/End: Original strand, 54640430 - 54640507
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||||||||| | ||||| | |||||| ||||||| | |||||| ||| ||||||||| |||| | ||||||||    
T  54640430 tttttacacaagaggctgtttccaagacttgaacccgtgacctttcagccacgtgacaacaattttaccgttgcgcca 54640507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 94 - 126
Target Start/End: Complemental strand, 8820613 - 8820581
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatt 126  Q
    ||||||||||||| |||||||||||||||||||    
T  8820613 catacgcagggtctgggaaggggtcccaccatt 8820581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 237
Target Start/End: Original strand, 50856344 - 50856404
Alignment:
Q  177 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatcattgcgcca 237  Q
    |||||||||||||| ||||||| | ||||| |||  |||||||||||||| | ||||||||    
T  50856344 gtttctaggacttgaacccgtgacctttcaatcatgtgacaacaactttaccgttgcgcca 50856404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 72; Significance: 7e-33; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 30713 - 30557
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||||||    |||||||||| ||    
T  30713 aaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcag----ccctaccctg-tt 30621  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||    
T  30620 ttacacaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaacttta 30557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 63 - 226
Target Start/End: Original strand, 13023 - 13180
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgttt 162  Q
    ||||||||| | |||||||| ||||| ||| ||||||||||||| |||||||||||||||||  || |||||||| ||||||||||    |||| |||||    
T  13023 aaaagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccacca--ttcggtgtattgtacgcagcct----taccttgttt 13116  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||| |||||| | ||||| |||||||| ||| ||| | |||||||||||||||||||||||||    
T  13117 ttacgcaagaggctgtttccaggacttgaaccggtgacctttcagtcacatgacaacaacttta 13180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 64 - 218
Target Start/End: Complemental strand, 59114 - 58963
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-ttt 162  Q
    |||||||| | || ||||| ||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||| ||    ||||||| |||    
T  59114 aaagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtct----taccctgtttt 59019  T
Q  163 ttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaa 218  Q
    ||| ||||||| | ||||| |||||||| ||||||| | |||||||||||||||||    
T  59018 ttatacaagaggctgtttccaggacttgaacccgtgacctttcagtcacatgacaa 58963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 63 - 226
Target Start/End: Complemental strand, 46967 - 46809
Alignment:
Q  63 aaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt-ccctaccctgtt 161  Q
    ||||||||| | |||||||| ||||||||| |||||||||||||||||||||||||||||||  ||||||||||| |||||| |||| |||||     ||    
T  46967 aaaagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcaaccttacccta----ttt 46874  T
Q  162 tttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||   ||||| || ||||| ||||||| | ||  |||||||||||||||||||||    
T  46873 tttacacaagaggttgtttccagcacttgaacccgtgaccttctagtcacatgacaacaacttta 46809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 78 - 226
Target Start/End: Original strand, 24786 - 24924
Alignment:
Q  78 tgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagacc 176  Q
    ||||| ||||||||| |||||||||||| ||||||||||||||||||  |||||||| || ||||||||||    ||||||| |||||||||||||| |     
T  24786 tgcactaaagctcccgcatacgcagggttcgggaaggggtcccacca--tttggtgtgttgtacgcagcct----taccctgttttttacacaagaggct 24879  T
Q  177 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||     |||||| |||| || | |||||||||||||||||||||||||    
T  24880 gtt-----gacttgaacccatgacctttcagtcacatgacaacaacttta 24924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 149
Target Start/End: Complemental strand, 43795 - 43709
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaa-ggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||| ||| |||||| | ||||||| |||| |||||||||| ||| |||||||||||||||  |||||||| |||||||||||    
T  43795 taaaagggcaactcagtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccattt--ggtgtattgtacgcagcctt 43709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 46727 - 46771
Alignment:
Q  84 aaagctccctcatacgcagggtccgggaaggggtcccaccatttt 128  Q
    ||||||||| ||||||||||||| |||||||||||||||||||||    
T  46727 aaagctcccgcatacgcagggtctgggaaggggtcccaccatttt 46771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 77 - 226
Target Start/End: Complemental strand, 10932 - 10788
Alignment:
Q  77 gtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagagac 175  Q
    |||||| ||||||||| |||||||||||||||||||||||||||||||  |||||||||||  ||||||    |||||||||| ||||||||||||||      
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccacca--tttggtgtattggacgcag----ccctaccctgttttttacacaagaggt 10839  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     ||||  ||  |||| ||||||| | || ||||||||||||||||||||||    
T  10838 tgttttcagaccttgaacccgtgaccttccagtcacatgacaacaacttta 10788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 226
Target Start/End: Original strand, 10080 - 10205
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggac 193  Q
    |||| ||||||||||||||||||||||||  | ||||||||||| ||||||| ||    ||| ||| ||||||||||||| | ||||| |||||||| ||    
T  10080 catatgcagggtccgggaaggggtcccac--tatttggtgtattgtacgcagtct----tactctg-ttttacacaagaggctgtttccaggacttgaac 10172  T
Q  194 ccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||| | |||||||||||||||||||||||||    
T  10173 ccgtgacctttcagtcacatgacaacaacttta 10205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 94 - 226
Target Start/End: Original strand, 20408 - 20533
Alignment:
Q  94 catacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagaccgtttctaggacttggac 193  Q
    |||| ||||||||||||||||||||||||  | ||||||||||| ||||||| ||    ||| ||| ||||||||||||| | ||||| |||||||| ||    
T  20408 catatgcagggtccgggaaggggtcccac--tatttggtgtattgtacgcagtct----tactctg-ttttacacaagaggctgtttccaggacttgaac 20500  T
Q  194 ccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||| | |||||||||||||||||||||||||    
T  20501 ccgtgacctttcagtcacatgacaacaacttta 20533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1176 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 226
Target Start/End: Original strand, 1599 - 1742
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 175  Q
    ||||||| ||||||||| ||||||| |||||||||||||||||||| ||  ||||||||||| || |||||||    || |||| |||||||||||||      
T  1599 ggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatca--tttggtgtattgtatgcagcct----tatcctg-ttttacacaagaggt 1691  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     ||||  |||||||| |||| || | |||||||||||||||||||||||||    
T  1692 tgttttcaggacttgaacccatgacctttcagtcacatgacaacaacttta 1742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 149
Target Start/End: Original strand, 48632 - 48717
Alignment:
Q  62 taaaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||||| | |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  48632 taaaagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 48717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 101 - 226
Target Start/End: Complemental strand, 4258 - 4135
Alignment:
Q  101 agggtccgggaaggggtcccaccattt-ttggtgtattttacgcagccttccctaccctgt-ttttacacaagagaccgtttctaggacttggacccgtg 198  Q
    |||||||||||||||||||||||| || |||||||||| |||||| ||||    | ||||| |||||||||||||   ||||| |||||||| |||||||    
T  4258 agggtccgggaaggggtcccaccaattattggtgtattgtacgcaacctt----atcctgtattttacacaagaggttgtttccaggacttgaacccgtg 4163  T
Q  199 tcgtttcagtcacatgacaacaacttta 226  Q
     | |||||||||||| ||||||||||||    
T  4162 acctttcagtcacataacaacaacttta 4135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 149
Target Start/End: Original strand, 24144 - 24216
Alignment:
Q  75 cggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||||| | ||||||| |||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||    
T  24144 cggtgcactagagctcccgcatatgcagggtccgggaaggggtcccacca--tttggtgtattgtacgcagcctt 24216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 226
Target Start/End: Complemental strand, 11252 - 11110
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacacaagagac 175  Q
    ||||||| | ||||||| |||| |||||||||||||||| |||||||||  ||||||||||| || |||||||    |||  || ||||||||||||| |    
T  11252 ggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccacca--tttggtgtattgtaagcagcct----tactttg-ttttacacaagaggc 11160  T
Q  176 cgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
     ||||| |||||||| ||||||| | |||||||||||| | ||||||||||    
T  11159 tgtttccaggacttgaacccgtgacctttcagtcacat-agaacaacttta 11110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 76 - 198
Target Start/End: Original strand, 72879 - 72997
Alignment:
Q  76 ggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctg-tttttacacaagaga 174  Q
    ||||||| ||||||||| |||||||||| ||||||||||||| | ||||  ||||||||||| || |||||||    |||| || |||||||||||||||    
T  72879 ggtgcactaaagctcccgcatacgcaggttccgggaaggggtactacca--tttggtgtattgtaggcagcct----taccgtgttttttacacaagaga 72972  T
Q  175 c-cgtttctaggacttggacccgtg 198  Q
    |  |||||||||||||| |||||||    
T  72973 cttgtttctaggacttgaacccgtg 72997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 149
Target Start/End: Complemental strand, 3679 - 3596
Alignment:
Q  64 aaagggcagctcggtgcaccaaagctccctcatacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagcctt 149  Q
    |||||| | |||||||||| |||||| || |||||||||||| ||||||||||||||| ||  || |||||||| |||||||||||    
T  3679 aaagggaaactcggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatca--ttcggtgtattatacgcagcctt 3596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 160 - 226
Target Start/End: Original strand, 226497 - 226563
Alignment:
Q  160 tttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||| ||||||| | |||||||||||||| | ||||| | |||||||||||||||||||||||||    
T  226497 tttttagacaagaggctgtttctaggacttgaatccgtgacctttcagtcacatgacaacaacttta 226563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 95 - 218
Target Start/End: Original strand, 35048 - 35167
Alignment:
Q  95 atacgcagggtccgggaaggggtcccaccatttttggtgtattttacgcagccttccctaccctgtttttacac--aagagaccgtttctaggacttgga 192  Q
    ||||||| | ||| |||| ||||||||||||||  |||||||| |||||||||||    |||||||||| ||||  ||||||| ||||  |||||||| |    
T  35048 atacgcaagatccaggaaagggtcccaccattt--ggtgtattgtacgcagcctt----accctgttttcacacacaagagactgttttcaggacttgaa 35141  T
Q  193 cccgtgtcgtttcagtcacatgacaa 218  Q
    |||||| | || ||||||||||||||    
T  35142 cccgtgaccttacagtcacatgacaa 35167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 226
Target Start/End: Complemental strand, 43176 - 43107
Alignment:
Q  157 ctgtttttacacaagagaccgtttctaggacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    ||||||||||||||||| | ||||||||||| || || |||| | ||||| ||||||||||| |||||||    
T  43176 ctgtttttacacaagaggctgtttctaggacctgaactcgtgacctttcaatcacatgacaataacttta 43107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 185 - 226
Target Start/End: Complemental strand, 83894 - 83853
Alignment:
Q  185 gacttggacccgtgtcgtttcagtcacatgacaacaacttta 226  Q
    |||||| ||||||| | |||||||||||||||||||||||||    
T  83894 gacttgaacccgtgacctttcagtcacatgacaacaacttta 83853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 177 - 229
Target Start/End: Complemental strand, 24691 - 24639
Alignment:
Q  177 gtttctaggacttggacccgtgtcgtttcagtcacatgacaacaactttatca 229  Q
    ||||| |||||||| ||||||| | || ||||||| |||||||||||||||||    
T  24691 gtttccaggacttgaacccgtgaccttacagtcacttgacaacaactttatca 24639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 127
Target Start/End: Complemental strand, 23715 - 23671
Alignment:
Q  83 caaagctccctcatacgcagggtccgggaaggggtcccaccattt 127  Q
    |||||||||| ||||| || |||| ||||||||||||||||||||    
T  23715 caaagctcccacatactcaaggtctgggaaggggtcccaccattt 23671  T

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