View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6713_low_14 (Length: 232)
Name: NF6713_low_14
Description: NF6713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6713_low_14 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 20 - 232
Target Start/End: Complemental strand, 11613117 - 11612905
Alignment:
| Q |
20 |
caaagttcggccagaaggtaagcaaagtctagccaaagattgtttaagtcagggatcgaactcaagtactcctcattgatccgaccgtaacttaaactca |
119 |
Q |
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| T |
11613117 |
caaagttcggccagaaggtaagcaaagtctagccaaagattgtttaagtcagggatcgaactcaagtactcctcattaatccgaccgtaacttaaactca |
11613018 |
T |
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| Q |
120 |
tcaaccacttggttatgctctactcaattatacatatgaatgtttgacatctacatctaaatgtgaagagcaagcaaaggaaaaagaaaaggaccttaag |
219 |
Q |
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| T |
11613017 |
tcaaccacttggttatgctctactcaattatacatatgaatgtttgacatctacatctaaatgtgaagagcaagcaaaggaaaaagaaaaggaccttaag |
11612918 |
T |
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| Q |
220 |
actaaaaggcaaa |
232 |
Q |
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| T |
11612917 |
actaaaaggcaaa |
11612905 |
T |
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