View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6715_high_18 (Length: 244)

Name: NF6715_high_18
Description: NF6715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6715_high_18
NF6715_high_18
[»] chr3 (56 HSPs)
chr3 (6-244)||(34129018-34129256)
chr3 (6-244)||(17357844-17358084)
chr3 (6-244)||(10321450-10321689)
chr3 (6-244)||(3476794-3477033)
chr3 (6-244)||(17368727-17368976)
chr3 (6-244)||(54270652-54270891)
chr3 (6-244)||(4117440-4117687)
chr3 (6-244)||(55128798-55129047)
chr3 (6-244)||(3482261-3482510)
chr3 (81-244)||(30341768-30341931)
chr3 (86-244)||(20090591-20090749)
chr3 (86-244)||(20095716-20095874)
chr3 (86-244)||(15762959-15763117)
chr3 (86-244)||(15768120-15768278)
chr3 (144-244)||(17364071-17364173)
chr3 (149-244)||(13022035-13022130)
chr3 (149-244)||(33089335-33089430)
chr3 (149-234)||(38436983-38437068)
chr3 (149-241)||(53119538-53119630)
chr3 (149-244)||(20810380-20810475)
chr3 (156-236)||(2617255-2617336)
chr3 (149-236)||(26962075-26962162)
chr3 (157-236)||(758368-758448)
chr3 (157-244)||(23666123-23666211)
chr3 (157-244)||(24038371-24038459)
chr3 (157-244)||(39775728-39775816)
chr3 (157-244)||(8069685-8069772)
chr3 (157-244)||(3672591-3672679)
chr3 (157-244)||(3692623-3692711)
chr3 (157-244)||(14438695-14438783)
chr3 (157-244)||(18467230-18467318)
chr3 (157-244)||(49971424-49971512)
chr3 (151-244)||(10586177-10586270)
chr3 (155-201)||(21494300-21494346)
chr3 (157-244)||(7571218-7571306)
chr3 (157-244)||(8883175-8883263)
chr3 (157-244)||(20520059-20520147)
chr3 (151-198)||(795399-795446)
chr3 (157-227)||(32474680-32474751)
chr3 (159-227)||(26706808-26706877)
chr3 (173-244)||(1688902-1688974)
chr3 (157-244)||(3033649-3033737)
chr3 (157-236)||(3419008-3419088)
chr3 (157-244)||(18472013-18472100)
chr3 (157-236)||(29350253-29350333)
chr3 (157-243)||(12965873-12965960)
chr3 (159-231)||(16013727-16013801)
chr3 (157-204)||(23661464-23661511)
chr3 (194-244)||(25726830-25726881)
chr3 (157-204)||(27708982-27709029)
chr3 (162-235)||(25023929-25024003)
chr3 (157-225)||(1741109-1741178)
chr3 (157-241)||(55431323-55431408)
chr3 (157-244)||(8887935-8888023)
chr3 (157-236)||(12112641-12112721)
chr3 (178-241)||(31002707-31002771)
[»] scaffold0060 (1 HSPs)
scaffold0060 (6-244)||(37018-37256)
[»] chr7 (35 HSPs)
chr7 (6-244)||(2234479-2234717)
chr7 (6-244)||(21080888-21081128)
chr7 (6-244)||(16539261-16539499)
chr7 (6-244)||(16626163-16626401)
chr7 (6-244)||(32212502-32212741)
chr7 (6-244)||(42571953-42572191)
chr7 (6-244)||(17495411-17495649)
chr7 (6-244)||(17557565-17557803)
chr7 (6-244)||(12934405-12934643)
chr7 (6-243)||(19309460-19309697)
chr7 (6-244)||(43892866-43893115)
chr7 (78-244)||(47177040-47177206)
chr7 (86-244)||(33238010-33238168)
chr7 (86-244)||(47998983-47999141)
chr7 (86-243)||(47993809-47993966)
chr7 (86-244)||(33243187-33243345)
chr7 (149-244)||(9973470-9973565)
chr7 (149-244)||(33226422-33226517)
chr7 (149-244)||(24528362-24528457)
chr7 (149-229)||(28292496-28292575)
chr7 (157-244)||(4579515-4579603)
chr7 (185-241)||(22857715-22857771)
chr7 (157-244)||(8076057-8076145)
chr7 (157-244)||(9650967-9651055)
chr7 (157-244)||(23246933-23247021)
chr7 (157-244)||(23866075-23866163)
chr7 (157-244)||(26341206-26341294)
chr7 (159-244)||(3357634-3357720)
chr7 (151-244)||(27256250-27256343)
chr7 (157-236)||(44423137-44423217)
chr7 (157-244)||(4930240-4930328)
chr7 (157-244)||(12254086-12254174)
chr7 (157-236)||(13314236-13314316)
chr7 (157-231)||(44510677-44510752)
chr7 (157-244)||(8268300-8268388)
[»] chr8 (41 HSPs)
chr8 (6-233)||(43999079-43999306)
chr8 (6-244)||(17955638-17955876)
chr8 (6-244)||(24884720-24884959)
chr8 (6-244)||(21643930-21644168)
chr8 (23-244)||(42514240-42514461)
chr8 (6-171)||(21643490-21643652)
chr8 (86-244)||(32015708-32015866)
chr8 (149-244)||(33616719-33616814)
chr8 (149-244)||(19430022-19430117)
chr8 (149-244)||(19435524-19435619)
chr8 (149-244)||(19566171-19566266)
chr8 (149-244)||(19571673-19571768)
chr8 (149-244)||(31030536-31030631)
chr8 (6-75)||(21642740-21642809)
chr8 (6-75)||(21643115-21643184)
chr8 (7-75)||(21641616-21641684)
chr8 (7-75)||(21641991-21642059)
chr8 (7-75)||(21642366-21642434)
chr8 (156-244)||(13584358-13584454)
chr8 (157-244)||(15875668-15875756)
chr8 (157-244)||(31449866-31449954)
chr8 (157-244)||(44925923-44926011)
chr8 (157-231)||(43302718-43302794)
chr8 (157-236)||(19166649-19166729)
chr8 (157-244)||(38182237-38182325)
chr8 (157-236)||(40125885-40125965)
chr8 (86-140)||(32010605-32010659)
chr8 (157-229)||(18876367-18876440)
chr8 (157-244)||(17025942-17026030)
chr8 (157-244)||(17556434-17556522)
chr8 (157-236)||(17953873-17953953)
chr8 (157-244)||(33416554-33416642)
chr8 (157-236)||(36683594-36683674)
chr8 (159-236)||(1807487-1807565)
chr8 (159-236)||(28559656-28559734)
chr8 (151-244)||(37771719-37771812)
chr8 (157-241)||(1910969-1911054)
chr8 (195-244)||(32010546-32010595)
chr8 (157-244)||(2965637-2965725)
chr8 (157-244)||(24090634-24090722)
chr8 (157-244)||(34118473-34118561)
[»] chr1 (35 HSPs)
chr1 (6-244)||(3584609-3584847)
chr1 (10-244)||(5724987-5725221)
chr1 (6-244)||(5730113-5730351)
chr1 (6-230)||(48246532-48246756)
chr1 (6-244)||(11250961-11251200)
chr1 (6-244)||(37404254-37404503)
chr1 (6-244)||(27716451-27716700)
chr1 (6-244)||(37409375-37409624)
chr1 (6-236)||(27711320-27711580)
chr1 (86-244)||(36684644-36684802)
chr1 (28-244)||(11387671-11387917)
chr1 (93-236)||(34318160-34318303)
chr1 (149-244)||(10106111-10106206)
chr1 (149-244)||(39747157-39747252)
chr1 (149-244)||(13890821-13890916)
chr1 (149-244)||(38734283-38734378)
chr1 (151-244)||(26651160-26651253)
chr1 (149-241)||(14582110-14582202)
chr1 (149-236)||(5602417-5602504)
chr1 (157-244)||(10135463-10135551)
chr1 (157-236)||(19799013-19799093)
chr1 (157-229)||(51041463-51041535)
chr1 (149-236)||(19422866-19422957)
chr1 (151-244)||(41097946-41098039)
chr1 (157-244)||(23192817-23192905)
chr1 (157-244)||(33301180-33301268)
chr1 (157-235)||(25188272-25188351)
chr1 (157-229)||(18784549-18784622)
chr1 (157-244)||(16649613-16649700)
chr1 (157-236)||(40165995-40166075)
chr1 (157-244)||(47451225-47451313)
chr1 (157-244)||(47455386-47455474)
chr1 (151-201)||(33055090-33055139)
chr1 (157-241)||(10140099-10140184)
chr1 (157-236)||(12260011-12260091)
[»] chr4 (49 HSPs)
chr4 (6-244)||(41393253-41393491)
chr4 (6-244)||(51019222-51019460)
chr4 (6-244)||(53797637-53797875)
chr4 (6-244)||(54991494-54991733)
chr4 (6-236)||(13710684-13710915)
chr4 (6-244)||(8980123-8980372)
chr4 (6-244)||(8985243-8985492)
chr4 (6-244)||(13700518-13700767)
chr4 (6-244)||(21299671-21299920)
chr4 (6-244)||(21304791-21305040)
chr4 (6-244)||(13695167-13695408)
chr4 (6-244)||(9763866-9764108)
chr4 (6-244)||(47046155-47046394)
chr4 (85-244)||(36354184-36354343)
chr4 (86-244)||(36359302-36359460)
chr4 (86-244)||(40004035-40004193)
chr4 (86-244)||(54348365-54348523)
chr4 (86-244)||(39999077-39999235)
chr4 (86-244)||(54343211-54343369)
chr4 (149-244)||(653051-653146)
chr4 (149-241)||(10120801-10120893)
chr4 (157-244)||(37259877-37259965)
chr4 (149-241)||(8083019-8083112)
chr4 (157-244)||(31269041-31269129)
chr4 (152-236)||(24490047-24490132)
chr4 (157-244)||(5271419-5271507)
chr4 (157-244)||(13521992-13522080)
chr4 (157-244)||(31273528-31273616)
chr4 (157-244)||(37264564-37264652)
chr4 (157-231)||(31765906-31765981)
chr4 (155-236)||(30564412-30564494)
chr4 (155-236)||(34644573-34644655)
chr4 (157-241)||(31729387-31729472)
chr4 (95-140)||(54990687-54990732)
chr4 (151-236)||(17359547-17359633)
chr4 (157-244)||(5928219-5928307)
chr4 (157-244)||(8693718-8693806)
chr4 (157-244)||(12823895-12823983)
chr4 (157-244)||(16421036-16421124)
chr4 (157-244)||(33463356-33463444)
chr4 (157-204)||(51697965-51698012)
chr4 (6-44)||(54990648-54990686)
chr4 (157-241)||(8030476-8030561)
chr4 (157-229)||(16953107-16953180)
chr4 (157-229)||(19101999-19102072)
chr4 (157-229)||(55251741-55251814)
chr4 (157-244)||(2819851-2819939)
chr4 (157-201)||(10318779-10318823)
chr4 (178-241)||(39319642-39319706)
[»] chr2 (33 HSPs)
chr2 (6-244)||(28751578-28751816)
chr2 (6-244)||(40518310-40518559)
chr2 (6-233)||(40392338-40392576)
chr2 (86-244)||(42723380-42723538)
chr2 (86-244)||(42728549-42728707)
chr2 (86-244)||(44096310-44096468)
chr2 (86-244)||(44754525-44754683)
chr2 (86-244)||(44759691-44759849)
chr2 (6-105)||(4163426-4163525)
chr2 (152-244)||(42914650-42914742)
chr2 (154-244)||(5089286-5089376)
chr2 (157-244)||(30658270-30658358)
chr2 (157-244)||(9180724-9180812)
chr2 (157-244)||(10160724-10160812)
chr2 (157-244)||(1934993-1935081)
chr2 (157-244)||(9189803-9189891)
chr2 (157-244)||(18344438-18344526)
chr2 (151-236)||(11658882-11658968)
chr2 (157-236)||(30650944-30651024)
chr2 (161-241)||(42926763-42926846)
chr2 (157-243)||(25478297-25478384)
chr2 (155-229)||(28945191-28945266)
chr2 (159-236)||(29677396-29677474)
chr2 (156-244)||(160048-160137)
chr2 (157-244)||(6297886-6297973)
chr2 (157-236)||(12796940-12797020)
chr2 (157-236)||(19578414-19578494)
chr2 (157-244)||(19892466-19892554)
chr2 (157-244)||(25497325-25497413)
chr2 (157-244)||(31326746-31326834)
chr2 (157-244)||(35601929-35602017)
chr2 (180-244)||(19538393-19538458)
chr2 (157-236)||(7737851-7737931)
[»] scaffold0594 (1 HSPs)
scaffold0594 (6-244)||(9057-9295)
[»] scaffold0166 (2 HSPs)
scaffold0166 (6-244)||(13588-13827)
scaffold0166 (6-236)||(19041-19277)
[»] chr5 (48 HSPs)
chr5 (6-241)||(1413901-1414135)
chr5 (6-244)||(26709110-26709349)
chr5 (6-244)||(26978844-26979083)
chr5 (6-244)||(17510066-17510315)
chr5 (6-244)||(36253834-36254082)
chr5 (6-244)||(17504961-17505210)
chr5 (6-244)||(42019581-42019830)
chr5 (6-241)||(41858604-41858850)
chr5 (6-236)||(24776658-24776894)
chr5 (12-244)||(41853556-41853799)
chr5 (6-244)||(24771203-24771444)
chr5 (6-175)||(43579737-43579917)
chr5 (149-244)||(13582682-13582777)
chr5 (149-244)||(7805079-7805174)
chr5 (149-244)||(14374143-14374238)
chr5 (149-244)||(24435861-24435956)
chr5 (157-244)||(37248795-37248883)
chr5 (157-244)||(12103032-12103120)
chr5 (157-244)||(26667279-26667367)
chr5 (157-244)||(26938876-26938964)
chr5 (157-244)||(29167973-29168061)
chr5 (157-244)||(36423644-36423732)
chr5 (157-244)||(556702-556790)
chr5 (157-244)||(561474-561562)
chr5 (157-244)||(7451765-7451853)
chr5 (157-244)||(36428716-36428804)
chr5 (157-244)||(36937511-36937599)
chr5 (157-244)||(36942265-36942353)
chr5 (151-244)||(21323960-21324053)
chr5 (157-229)||(28857885-28857958)
chr5 (157-241)||(35679875-35679960)
chr5 (157-244)||(12501899-12501987)
chr5 (153-244)||(13301482-13301573)
chr5 (157-244)||(32461549-32461637)
chr5 (157-244)||(39518417-39518505)
chr5 (157-244)||(39523056-39523144)
chr5 (157-244)||(42001441-42001529)
chr5 (157-231)||(6514601-6514676)
chr5 (151-244)||(31731551-31731644)
chr5 (157-229)||(10759820-10759893)
chr5 (157-244)||(12045139-12045227)
chr5 (157-244)||(41996672-41996760)
chr5 (159-241)||(40147905-40147988)
chr5 (157-236)||(3665947-3666027)
chr5 (157-244)||(12041932-12042020)
chr5 (157-236)||(12102831-12102911)
chr5 (157-236)||(31986742-31986822)
chr5 (6-50)||(42024566-42024610)
[»] chr6 (38 HSPs)
chr6 (6-244)||(2817996-2818234)
chr6 (6-244)||(31981568-31981809)
chr6 (6-244)||(21396707-21396956)
chr6 (6-236)||(29491074-29491316)
chr6 (6-241)||(34375930-34376175)
chr6 (6-244)||(24192318-24192567)
chr6 (6-233)||(22703204-22703442)
chr6 (6-244)||(24191221-24191470)
chr6 (6-244)||(34142088-34142335)
chr6 (6-244)||(34154704-34154951)
chr6 (6-244)||(21401763-21401998)
chr6 (86-244)||(22698172-22698330)
chr6 (36-149)||(6728285-6728398)
chr6 (149-244)||(19478156-19478251)
chr6 (152-231)||(13605087-13605166)
chr6 (151-236)||(10642725-10642811)
chr6 (155-244)||(12182998-12183088)
chr6 (149-230)||(31495833-31495914)
chr6 (149-230)||(31501219-31501300)
chr6 (157-232)||(17964559-17964635)
chr6 (159-244)||(3901920-3902006)
chr6 (156-244)||(5600971-5601060)
chr6 (149-230)||(31515723-31515804)
chr6 (157-243)||(11570749-11570836)
chr6 (157-243)||(33687603-33687690)
chr6 (152-236)||(17281558-17281643)
chr6 (149-230)||(31476007-31476088)
chr6 (157-236)||(24589164-24589244)
chr6 (157-204)||(12689019-12689066)
chr6 (157-231)||(16836156-16836231)
chr6 (157-236)||(21309046-21309126)
chr6 (157-204)||(11614092-11614139)
chr6 (157-231)||(13736678-13736753)
chr6 (157-241)||(6407860-6407945)
chr6 (149-229)||(29325558-29325639)
chr6 (157-236)||(2700106-2700186)
chr6 (156-235)||(6112972-6113051)
chr6 (157-244)||(12406353-12406441)
[»] scaffold0517 (1 HSPs)
scaffold0517 (6-244)||(3571-3820)
[»] scaffold0014 (2 HSPs)
scaffold0014 (86-244)||(31553-31711)
scaffold0014 (86-236)||(26389-26539)
[»] scaffold0055 (1 HSPs)
scaffold0055 (86-244)||(3066-3224)
[»] scaffold0052 (1 HSPs)
scaffold0052 (86-244)||(81311-81469)
[»] scaffold0011 (2 HSPs)
scaffold0011 (149-244)||(1573-1668)
scaffold0011 (149-244)||(7054-7149)
[»] scaffold0132 (2 HSPs)
scaffold0132 (150-244)||(2765-2859)
scaffold0132 (150-244)||(10725-10819)
[»] scaffold0352 (1 HSPs)
scaffold0352 (157-244)||(7111-7199)
[»] scaffold0182 (1 HSPs)
scaffold0182 (157-244)||(9887-9975)
[»] scaffold0057 (1 HSPs)
scaffold0057 (157-244)||(35641-35729)
[»] scaffold0002 (2 HSPs)
scaffold0002 (157-244)||(4081-4169)
scaffold0002 (157-224)||(443945-444011)
[»] scaffold0067 (1 HSPs)
scaffold0067 (157-244)||(33968-34056)
[»] scaffold0012 (1 HSPs)
scaffold0012 (157-243)||(166086-166173)
[»] scaffold0020 (1 HSPs)
scaffold0020 (151-244)||(1220-1313)
[»] scaffold0061 (1 HSPs)
scaffold0061 (151-243)||(45793-45885)
[»] scaffold0017 (1 HSPs)
scaffold0017 (151-243)||(152902-152994)
[»] scaffold0045 (1 HSPs)
scaffold0045 (157-244)||(83073-83161)
[»] scaffold0018 (1 HSPs)
scaffold0018 (152-236)||(171711-171794)


Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 56)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 34129018 - 34129256
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34129018 gtgttgacgaaccgttcttttcttcatccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 34129117  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34129118 tcgagcgatttctggtggtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 34129217  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  34129218 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 34129256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 17358084 - 17357844
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17358084 gtgttgacgaaccgttcttttcttcttccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 17357985  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatt 203  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  17357984 tcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatt 17357885  T
Q  204 taggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||||||| || |||||||    
T  17357884 taggtagtgccgcgaaacgtcttaaagaaatcgacctggtc 17357844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 10321689 - 10321450
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10321689 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 10321590  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctg-ttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||||||||| |||||| ||||||||  |||||||||||||||||||||||||||||    
T  10321589 tcgagcgatttctggcagtgcagcctttaatcgtacagatggaatctgggctgtttttattctggagacaacgcggttgctagtctaccttgcacaattt 10321490  T
Q  205 aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    | |||||||||||||||||||||||||||||| |||||||    
T  10321489 aagtagtgccgcgaaacgtcttaaagaaagcgacctggtc 10321450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 3476794 - 3477033
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctcct-tctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttatt 104  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  3476794 gtgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaaccatactgaggtgttatt 3476893  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    |||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  3476894 ctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactt 3476993  T
Q  205 aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  3476994 aggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 3477033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 17368976 - 17368727
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  17368976 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 17368877  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17368876 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 17368777  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  17368776 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 17368727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 54270891 - 54270652
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcc-tccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttatt 104  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||||||||||    
T  54270891 gtgttgacgaaccgttcttttcttccctccttctttggtttctcgagtggtctgcaaaccatattagagtggtttttcaaaaccatattgaggtgttatt 54270792  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    |||||||||||||||| |||||||| ||||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  54270791 ctcgagcgatttctggcagtgcagcctttaatcgtacagtttgaatctgaactgttttatcctggagacggcgcggttgctagtctaccttgcacaactt 54270692  T
Q  205 aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||| ||||||||||||||| |||||||    
T  54270691 aggtagtgccgcgaaatgtcttaaagaaagcgacctggtc 54270652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 4117440 - 4117687
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcc-tccttctttggtttctcgagtggtctacgtaccatattagagtggttttt--------cgaaaccatattgag 96  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||| ||||||||||        |||||||||| ||||    
T  4117440 gtgttgacgaaccgttcttttcttccctccttctttggtttctcgagtggtctatgaaccatattacagtggtttttcgaattttcgaaaccatactgag 4117539  T
Q  97 gtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 196  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  4117540 gtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacagcgcggttgctagtctaccttg 4117639  T
Q  197 cacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||| |||||||||||||||||| ||||||| ||||||| |||||||    
T  4117640 cacaacttaggtagtgccgcgaaatgtcttaacgaaagcgacctggtc 4117687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 55129047 - 55128798
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||           ||| |||    
T  55129047 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacataccatattagagtggtttttcgaaacttttcgaaaaccatgttg 55128948  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |  |||||||||||||||||||||||||||||||||||||||||||||||    
T  55128947 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttgaaatctgggctgttttatcctggagacggcgcggttgctagtctacct 55128848  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    | ||||| ||||||||||||||||||||||||||||||| || |||||||    
T  55128847 tacacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtc 55128798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 3482261 - 3482510
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctcct-tctttggtttctcgagtggtctacgtaccatattagagtggttttt----------cgaaaccatattg 94  Q
    |||||||||||||||||||||||||||||| | ||||| ||||| |||||||||||| |||||||||||||||||||          |||||||||| ||    
T  3482261 gtgttgacgaaccgttcttttcttcctcctctatttggattctcaagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaaccatactg 3482360  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||    
T  3482361 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 3482460  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| ||||||| |||||||||| ||||||||||||||| |||||||    
T  3482461 tgcacaaattaggtaatgccgcgaaaagtcttaaagaaagcgacctggtc 3482510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 81 - 244
Target Start/End: Original strand, 30341768 - 30341931
Alignment:
Q  81 tcgaaaccatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcgg 180  Q
    |||| ||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||| |||||||||||||||||||||||||||| || ||||    
T  30341768 tcgagaccatattgaggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagatggtgcgg 30341867  T
Q  181 ttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||    
T  30341868 ttgctagtctaccttacacaatttaggtagtgccgcgaaacgtcttaaagaaagtgacctggtc 30341931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 20090591 - 20090749
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  20090591 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 20090690  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  20090691 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 20090749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 20095716 - 20095874
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  20095716 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 20095815  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  20095816 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 20095874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 15762959 - 15763117
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  15762959 accatatcgaggtgtaattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 15763058  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| || ||||||||||||||||||||||||||| |||| |||||||    
T  15763059 agtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 15763117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 15768120 - 15768278
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  15768120 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 15768219  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| || ||||||||||||||||||||||||||| |||| |||||||    
T  15768220 agtctaccttgcacagttcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 15768278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 144 - 244
Target Start/End: Complemental strand, 17364173 - 17364071
Alignment:
Q  144 atagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||| ||||    
T  17364173 atagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacacaatttaggtagtgccgcgaaacgtcttaaagaaagcgacctg 17364074  T
Q  242 gtc 244  Q
    |||    
T  17364073 gtc 17364071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 13022130 - 13022035
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||| ||||| | |||| |||||||    
T  13022130 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgttttaaaaagagcgacctggtc 13022035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 33089335 - 33089430
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||| ||||||||||||| ||||||||| ||||| ||||||||||||||||| |  |||||||||||||||||||||||||| |||| |||||||    
T  33089335 atctgagctgttttatcctagagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtc 33089430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 149 - 234
Target Start/End: Original strand, 38436983 - 38437068
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaag 234  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| || | ||||||| |||||||||||||||||||    
T  38436983 atctgggctgttttatcctggagacggcgtggttgttagtctacctttcacaacttggatagtgccacgaaacgtcttaaagaaag 38437068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 53119630 - 53119538
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    |||||| |||||||||||| ||||||||| ||||| ||||||||||||||||| ||  ||||||||||||||||||||||||| |||| ||||    
T  53119630 atctggcctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgagtagtgccgcgaaacgtcttaaagagagcgacctg 53119538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 20810475 - 20810380
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||| ||||||||||||||||| | || |||||||    
T  20810475 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgctgcgaaacgtcttaaagagaacgacctggtc 20810380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 156 - 236
Target Start/End: Original strand, 2617255 - 2617336
Alignment:
Q  156 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttag-gtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||  | | ||||||||||||||||||||||||||||||    
T  2617255 ctgttttatcctggaggcggcgcggttgttagtctaccttgcacaaactcgagtagtgccgcgaaacgtcttaaagaaagcg 2617336  T

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Target: chr3; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 149 - 236
Target Start/End: Complemental strand, 26962162 - 26962075
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||| ||||||||||||||||||||||| | ||| ||||||||||||||||| ||  |||||||| |||||||||||||||| ||||    
T  26962162 atctgtgctgttttatcctggagacggcgtgtttgttagtctaccttgcacaacttgtgtagtgccacgaaacgtcttaaagagagcg 26962075  T

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Target: chr3; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 758368 - 758448
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| ||||||||| |||||||||||||||| ||||    
T  758368 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcg 758448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 23666123 - 23666211
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  23666123 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 23666211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 24038371 - 24038459
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  24038371 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 24038459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 39775728 - 39775816
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  39775728 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 39775816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 8069772 - 8069685
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  |||||||||||| |  |||||| |||||||||||||||| |||| |||||||    
T  8069772 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaatttggacagtgccacgaaacgtcttaaagagagcgacctggtc 8069685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 3672679 - 3672591
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || ||||||  ||||||||||||||| |||| |||||||    
T  3672679 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 3672591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 3692711 - 3692623
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || ||||||  ||||||||||||||| |||| |||||||    
T  3692711 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 3692623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 14438695 - 14438783
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| | |||| |||||||||| ||| ||||||||| ||||||||||||||||  ||| |||||||    
T  14438695 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagggcgacctggtc 14438783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 18467318 - 18467230
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||  |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  18467318 tgttttatcctggaggcggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 18467230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 49971424 - 49971512
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| | ||| |||||| ||||||||||||| || ||||||| |||||||||||||||| | || |||||||    
T  49971424 tgttttatcctggaggcggcgtgattgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagagatcgacctggtc 49971512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 10586177 - 10586270
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||||||  |||||||||| ||   ||||||||||||||| |||||||    
T  10586177 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtc 10586270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 201
Target Start/End: Original strand, 21494300 - 21494346
Alignment:
Q  155 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa 201  Q
    |||||||||||| |||||||||||||||| |||||||||||||||||    
T  21494300 gctgttttatcccggagacggcgcggttgttagtctaccttgcacaa 21494346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 7571218 - 7571306
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| | ||| ||||||  ||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  7571218 tgttttatcctggaggcggcgtgattgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 7571306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 8883263 - 8883175
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| | ||| ||||| ||||||  |||||||||||| ||  |||||| |||||||||||||||| |||| |||||||    
T  8883263 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 8883175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 20520147 - 20520059
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaat-ttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||| ||||| ||||| ||||| |||||| ||||||||||| || || |||||| |||||||||||||||| || | |||||||    
T  20520147 tgttttatcttggaggcggcgtggttgatagtctcccttgcacaatcttgggcagtgccacgaaacgtcttaaagagagtgacctggtc 20520059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 151 - 198
Target Start/End: Original strand, 795399 - 795446
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgca 198  Q
    ||||||||||||||||||||| |||| |||||| ||||||||||||||    
T  795399 ctgggctgttttatcctggaggcggcacggttgttagtctaccttgca 795446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 32474680 - 32474751
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtctta 227  Q
    ||||||||||||||||||||| ||||| ||||||  ||||||||| ||| || |||||| ||||||||||||    
T  32474680 tgttttatcctggagacggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtctta 32474751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 227
Target Start/End: Complemental strand, 26706877 - 26706808
Alignment:
Q  159 ttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtctta 227  Q
    ||||||||||||| |||||| |||| ||||||||||||||| || || | |||||| |||||||||||||    
T  26706877 ttttatcctggaggcggcgcagttgttagtctaccttgcacaaacttggatagtgctgcgaaacgtctta 26706808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 244
Target Start/End: Original strand, 1688902 - 1688974
Alignment:
Q  173 cggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| ||| || ||||||||||||||  | || ||||||||| ||||||||||||||||||| |||||||    
T  1688902 cggcgcgattgttaatctaccttgcacaaactcgggtagtgccgcaaaacgtcttaaagaaagcgacctggtc 1688974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 3033737 - 3033649
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||| ||| ||| | ||||| |||||| |||||||||| ||| || ||||||  ||||||||||||||| |||| |||||||    
T  3033737 tgttttatccttgaggcggtgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 3033649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 3419088 - 3419008
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||||||||||| ||  |||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| ||||    
T  3419088 tgttttatcctgaaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcg 3419008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 18472100 - 18472013
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| |||||| |||||| || ||| || |||||| |||| |||||||    
T  18472100 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacg-aacatcgtaaagagagcgacctggtc 18472013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 29350333 - 29350253
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||| ||||  ||| | | |||| ||||||||||||| ||  |||||| |||||||||||||||||||||    
T  29350333 tgttttatcctggaggcggcatggtagatggtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcg 29350253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 12965873 - 12965960
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggt 243  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || ||||||   |||||||||||||| |||| ||||||    
T  12965873 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccataaaacgtcttaaagagagcgacctggt 12965960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 231
Target Start/End: Complemental strand, 16013801 - 16013727
Alignment:
Q  159 ttttatcctggagacggcgcggttgctagtctaccttgcacaa--tttaggtagtgccgcgaaacgtcttaaaga 231  Q
    ||||||||||||| ||||| ||| | ||||||| |||||||||  ||||| ||||| | ||||||||||||||||    
T  16013801 ttttatcctggaggcggcgtggtggatagtctatcttgcacaatttttagatagtgtcacgaaacgtcttaaaga 16013727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 23661464 - 23661511
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||||||    
T  23661464 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattt 23661511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 244
Target Start/End: Original strand, 25726830 - 25726881
Alignment:
Q  194 ttgcacaatt-taggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||| | |||||||||||||||||||||||||| |||| |||||||    
T  25726830 ttgcacaattctgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 25726881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 27709029 - 27708982
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    ||||||||||||||| ||||| ||||| |||||||||||||| |||||    
T  27709029 tgttttatcctggaggcggcgtggttgatagtctaccttgcataattt 27708982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 25023929 - 25024003
Alignment:
Q  162 tatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagc 235  Q
    |||||||||| |||| |||||| ||||||||||||||| || | |||||||| || ||||||||| || ||||||    
T  25023929 tatcctggaggcggcacggttgttagtctaccttgcacaaactgaggtagtgtcgtgaaacgtctcaaggaaagc 25024003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 225
Target Start/End: Original strand, 1741109 - 1741178
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtct 225  Q
    ||||||||||||||| ||||||||||| || | | |||||||| || | |||||||| ||||||||||||    
T  1741109 tgttttatcctggaggcggcgcggttgttaatttgccttgcacaaactcaggtagtgtcgcgaaacgtct 1741178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 55431408 - 55431323
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||| |||||  |  |||| | |||||||||||||||| |||| ||||    
T  55431408 tgttttatcctggaggcggcgtggttgatagtctgccttgcataatttttgacagtgtcacgaaacgtcttaaagagagcgacctg 55431323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 8888023 - 8887935
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  |||||  | |||||||||||||| |||| |||||||    
T  8888023 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacagtgcaacaaaacgtcttaaagagagcgacctggtc 8887935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 12112641 - 12112721
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||| ||| | ||||| ||||||  ||||||||| ||| |  |||||| |||||||||||||||| ||||    
T  12112641 tgttttatcctggaggcggtgtggttgatagtctgtcttgcacaactttggacagtgccacgaaacgtcttaaagagagcg 12112721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 31002771 - 31002707
Alignment:
Q  178 cggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    |||||| ||||||||||||||||||||  |||||||||| ||   ||||||||||||||| ||||    
T  31002771 cggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctg 31002707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 37256 - 37018
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37256 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggttttttgaaaccatattgaggtgttattc 37157  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||| ||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37156 tcgagcgatttttggcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 37057  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  37056 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 37018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 2234479 - 2234717
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2234479 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 2234578  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2234579 tcgagcgatttctggcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 2234678  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  2234679 ggtagtgccgcgaaacgtcttaaagaaagcaacctggtc 2234717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 21080888 - 21081128
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21080888 gtgttgacgaaccgttcttttcttcctccttctttggtttcttaagtggtctacgtaccatattagagtggttttttgaaaccatattgaggtgttattc 21080987  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatt 203  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||  |||||||    
T  21080988 tcgagcgatttctggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggtgcggttgctagtctaccttgcacacaatt 21081087  T
Q  204 taggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  21081088 taggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 21081128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 16539261 - 16539499
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  16539261 gtgttgacgaacagttcttttcttcctccttctttggtttctcgagtggtctacgtgtcatattagagtggtttttcgaaaccatactgaggtgttattc 16539360  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16539361 tcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactta 16539460  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  16539461 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 16539499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 16626401 - 16626163
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||    
T  16626401 gtgttgacgaacagttcttttcttcctccttctttggtttctcgagtggtctacgtgtcatattagagtggtttttcgaaaccatactgaggtgttattc 16626302  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  16626301 tcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactta 16626202  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  16626201 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 16626163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 32212502 - 32212741
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctcctt-ctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttatt 104  Q
    ||||||| ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  32212502 gtgttgatgaaccgttcttttcttcctcctttctttggtttctcgagtggtcttcgtaccatattggagtggtttttcgaaaccatattgaggtgttatt 32212601  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
     ||||||||||||||| |||||| | |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  32212602 ttcgagcgatttctggcagtgcaacctttaatcgtacagaaagaatctgggctgttttatcctggagacagcgcggttgctagtctaccttgcacaattt 32212701  T
Q  205 aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  32212702 aggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 32212741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 42572191 - 42571953
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||||||||    
T  42572191 gtgttgacgaaccgttcttttcctcctccttctttggtttctcgagtggtctacgaaccatatttgaatggtttttcgaaaccatattgaggtgttattc 42572092  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||| ||||||||| |||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42572091 tcgagagatttctggcagtgcagcctttaattttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactta 42571992  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  42571991 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 42571953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 17495649 - 17495411
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  17495649 gtgttgacgaaccgttcttttcttcctccttctttggtttcttgagtggtctacgtaccatataagagtggttttttgaaaccatatggaggtgttattc 17495550  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| ||||| || |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  17495549 tcgagcgatttctggcagtgctgcctttaatcgtacagtaagaatctgggctgttttatcttggagacggcgcggttgctagtctaccttgcacaactta 17495450  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  17495449 ggtagtgccgcgaaacgtcttaaaaaaagcgacctggtc 17495411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 17557565 - 17557803
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| |||||||||| ||||||||||||    
T  17557565 gtgttgacgaaccgttcttttcttcctccttctttggtttcttgagtggtctacgtaccatataagagtggttttttgaaaccatatggaggtgttattc 17557664  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| ||||| || |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  17557665 tcgagcgatttctggcagtgctgcctttaatcgtacagtaagaatctgggctgttttatcttggagacggcgcggttgctagtctaccttgcacaactta 17557764  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  17557765 ggtagtgccgcgaaacgtcttaaaaaaagcgacctggtc 17557803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 12934643 - 12934405
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  12934643 gtgttgatgaaccgttcttttcttcctccttctttgttttctcgagtggtctacgaaccatatttgagtggtttttcgaaaccatattgaggtgttattc 12934544  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||| ||||||||| |||||| | ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  12934543 tcgagagatttctggcagtgcaacctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactca 12934444  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||||||||||||| |||||||    
T  12934443 ggtagtgccgcgaaatgtcttaaagaaagcgacctggtc 12934405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 6 - 243
Target Start/End: Original strand, 19309460 - 19309697
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| |||||||||    
T  19309460 gtgttgacgaactgttcttttcctcctccttctttggtttctcgagtggtctacgaaccatatttgactggtttttcgaaaccatattgaagtgttattc 19309559  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||| ||||||||| |||||||| ||||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  19309560 tcgagagatttctggcagtgcagcctttaatgttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactta 19309659  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggt 243  Q
    ||| |||||||||||||||||||||| |||| ||||||    
T  19309660 ggtggtgccgcgaaacgtcttaaagacagcgacctggt 19309697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 139; E-Value: 7e-73
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 43893115 - 43892866
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctcct-tctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac----------catattg 94  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||||||||||||| ||||| |||||||||||||||||||          ||||  |    
T  43893115 gtgttgacgaatcgttcttttcttcctcccctctttggtttctcgagtggtctacgtgccatactagagtggtttttcgaaacttttcgaaaccataccg 43893016  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||| | |||||| | |||||||||||||  |||||||| |||||||||||||||||||||||||||||||||| |||||    
T  43893015 aggtgttattctcgagcgatttctagcagtgcaacctttaatcgtacagtaagaatctgagctgttttatcctggagacggcgcggttgctagtttacct 43892916  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| ||||||||||||| |||||||||||||||||||| |||||||    
T  43892915 tgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctggtc 43892866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 78 - 244
Target Start/End: Original strand, 47177040 - 47177206
Alignment:
Q  78 ttttcgaaaccatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcg 177  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||  |||||||| |||||||||||||| ||||||||    
T  47177040 ttttcgaaaccatactgaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgagctgttttatcctgaagacggcg 47177139  T
Q  178 cggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  47177140 cggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 47177206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 33238168 - 33238010
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  33238168 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 33238069  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  33238068 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 33238010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 47999141 - 47998983
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  47999141 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 47999042  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  47999041 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 47998983  T

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Target: chr7; HSP #15
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 86 - 243
Target Start/End: Complemental strand, 47993966 - 47993809
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  47993966 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 47993867  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggt 243  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||    
T  47993866 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggt 47993809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 33243345 - 33243187
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  33243345 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 33243246  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| || | |||||||    
T  33243245 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagtgacctggtc 33243187  T

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Target: chr7; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 9973565 - 9973470
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| ||||||||||||||||||||| ||||| | ||||||||||||||| || | ||||||||||||||||||||||||||||| |||||||    
T  9973565 atctgggttgttttatcctggagacggcgtggttgttcgtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagaaagcgacctggtc 9973470  T

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Target: chr7; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 33226517 - 33226422
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||| ||||||||||||||| ||||||| ||||| |||||||||||||| || ||||||||||||||||||||||||||||| |||| |||||||    
T  33226517 atctgagctgttttatcctggtgacggcgtggttgttagtctaccttgcataacttaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 33226422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 24528457 - 24528362
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| || |||| |||||| |||||||||||||| |||| |||||||    
T  24528457 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtaatgccgcaaaacgtcttaaagagagcgacctggtc 24528362  T

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Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 229
Target Start/End: Original strand, 28292496 - 28292575
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaa 229  Q
    ||||||||||||| ||||||||||||||| ||||| ||||||||||||||||| || | ||||||||||||||||||||||    
T  28292496 atctgggctgttt-atcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaa 28292575  T

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Target: chr7; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 4579603 - 4579515
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  4579603 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 4579515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 185 - 241
Target Start/End: Original strand, 22857715 - 22857771
Alignment:
Q  185 tagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||    
T  22857715 tagtctaccttgcacaacttagatagtgccgcgaaacgtcttaaagaaagcgacctg 22857771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 8076145 - 8076057
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| | ||| ||||| ||||||  |||||||||||| ||| |||||| |||||||||||||||| |||| |||||||    
T  8076145 tgttttatcctggaggcagcgtggttgatagtctgtcttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtc 8076057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 9650967 - 9651055
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  9650967 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 9651055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 23246933 - 23247021
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||| ||||||||| |||| |||||||    
T  23246933 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctggtc 23247021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 23866163 - 23866075
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  23866163 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 23866075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 26341294 - 26341206
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| ||||| |||||||||| |||| |||||||    
T  26341294 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtc 26341206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 3357634 - 3357720
Alignment:
Q  159 ttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| ||||||||||| ||||| |||||| |||||||||| ||| ||  || ||||||||||||||||||| |||| |||||||    
T  3357634 ttttatcatggagacggcgtggttgatagtctgccttgcacaactttgggctgtaccgcgaaacgtcttaaagagagcgacctggtc 3357720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 27256343 - 27256250
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||||||  |||||||||| ||   ||||||||||||||| |||||||    
T  27256343 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtc 27256250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 44423137 - 44423217
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||| |||||  |||| |||||| ||||| ||||||| ||| |||||| |||||||||||||||| ||||    
T  44423137 tgttttatcctggaggcggcgtagttgatagtctgccttgaacaattttggtcagtgccacgaaacgtcttaaagagagcg 44423217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 4930328 - 4930240
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||| |  ||| |||||||| ||  |||||| |||||||||||||||| |||| |||||||    
T  4930328 tgttttatcctggaggcggcgtggttgatagtatgacttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 4930240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 12254174 - 12254086
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||| || ||||| | ||| |||||| |||||||||| |||||| |||||| | |||| ||||||||| |||| |||||||    
T  12254174 tgttttatcctgtaggcggcgtgattgatagtctgccttgcacaactttaggcagtgccacaaaacatcttaaagagagcgacctggtc 12254086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 13314236 - 13314316
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||| || || || || ||||||||||||||||| ||| || ||| || |||||||||||||||| ||||    
T  13314236 tgttttatcctggaggcgacgtggctgatagtctaccttgcacaattttgggcagtaccacgaaacgtcttaaagagagcg 13314316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 44510677 - 44510752
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaaga 231  Q
    ||||||||||||||| ||||| ||||| ||||||  |||||||||||| ||  |||||| | ||||||||||||||    
T  44510677 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaaga 44510752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 8268388 - 8268300
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||| |||||  |||| ||||| ||||||  |||||||||||| ||  |||||| | |||||||||||||| |||| |||||||    
T  8268388 tgttttatcatggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacaaaacgtcttaaagagagcgacctggtc 8268300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 212; Significance: 1e-116; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 43999079 - 43999306
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43999079 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 43999178  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43999179 tcgagcgatttttggtagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagacggcgcagttgctagtctaccttgcacaattta 43999278  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaa 233  Q
    |||||||||||||||||| |||||||||    
T  43999279 ggtagtgccgcgaaacgttttaaagaaa 43999306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 17955638 - 17955876
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  17955638 gtgttgacgaatcgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 17955737  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17955738 tcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 17955837  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||| |||||| |||||||    
T  17955838 ggtagtgccgcgaaacgtcttaaaaaaagcgacctggtc 17955876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 24884959 - 24884720
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24884959 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 24884860  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctg-ttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    ||||||||||||||| |||||||| |||||||||||||| | ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| ||    
T  24884859 tcgagcgatttctggcagtgcagcctttaatcgtacagaaataatctgggctgtttttatcctggagacggcgtggttgctagtctaccttgcacaactt 24884760  T
Q  205 aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||| ||||||||||||||||||  |||||||    
T  24884759 aggtagtgccgcaaaacgtcttaaagaaagctacctggtc 24884720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 21643930 - 21644168
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||| ||||||||||||||||||||||||||||    
T  21643930 gtgttgatgaaccgttctttttttcctccttctttggtttctcgagtggtctgcgtaccatattatagtggcttttcgaaaccatattgaggtgttattc 21644029  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||    
T  21644030 tcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagtcggcgcggttgctagtctaccttgcacaactta 21644129  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  21644130 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 21644168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 23 - 244
Target Start/End: Original strand, 42514240 - 42514461
Alignment:
Q  23 ttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattctcgagcgatttctggta 122  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  42514240 ttttcttcctccttctttgttttctcgagtggtctgcgtactatattagagtggtttttcgaaaccatattgaggtgttattctcgagcgatttctggca 42514339  T
Q  123 gtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacg 222  Q
    ||||||| ||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42514340 gtgcagcctttaatcgtacagtttgaacctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacg 42514439  T
Q  223 tcttaaagaaagcggcctggtc 244  Q
    |||||||||||||| |||||||    
T  42514440 tcttaaagaaagcgacctggtc 42514461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 6 - 171
Target Start/End: Original strand, 21643490 - 21643652
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  21643490 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggcttttcgaaaccatattgaggtgttattc 21643589  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggag 171  Q
    |||||||||||   | |||||| | ||||||||||||| |||||||||||||||||||||||||||    
T  21643590 tcgagcgattt---gcagtgcaacctttaatcgtacagttagaatctgggctgttttatcctggag 21643652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 32015866 - 32015708
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  32015866 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 32015767  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||    
T  32015766 agtctaccttgcacaattcaggtagtgccacgaaacgtcttaaagagagcgacctggtc 32015708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 33616719 - 33616814
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  33616719 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 33616814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 19430117 - 19430022
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  19430117 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 19430022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 19435619 - 19435524
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  19435619 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 19435524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 19566266 - 19566171
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  19566266 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 19566171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 19571768 - 19571673
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||| ||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  19571768 atctgggctgttttatcctagagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 19571673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 31030631 - 31030536
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||||| ||||||| |||||||||||||||||| |||| |||||||    
T  31030631 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcataatttgggtagtgtcgcgaaacgtcttaaagagagcgacctggtc 31030536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 21642740 - 21642809
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtg 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21642740 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 75
Target Start/End: Original strand, 21643115 - 21643184
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtg 75  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21643115 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21643184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 21641616 - 21641684
Alignment:
Q  7 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtg 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21641616 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21641684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 21641991 - 21642059
Alignment:
Q  7 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtg 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21641991 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 75
Target Start/End: Original strand, 21642366 - 21642434
Alignment:
Q  7 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtg 75  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  21642366 tgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtg 21642434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 13584454 - 13584358
Alignment:
Q  156 ctgttttatcctggagacggcgcggttgctagtctaccttgcac--------aatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||| ||||| |||||||||||||||        || || |||||||||||||||||||||||||| |||| |||||||    
T  13584454 ctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 13584358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 15875668 - 15875756
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| ||||||||| |||||| |||| |||||||    
T  15875668 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcctaaagagagcgacctggtc 15875756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 31449866 - 31449954
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  31449866 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 31449954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 44925923 - 44926011
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||| ||||||| |||| |||||||    
T  44925923 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgttttaaagagagcgacctggtc 44926011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 43302718 - 43302794
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggta--gtgccgcgaaacgtcttaaaga 231  Q
    ||||||||||||||| ||||| ||||| ||||||||||||||||||||  | |  ||||| ||||||||||||||||    
T  43302718 tgttttatcctggaggcggcgtggttgatagtctaccttgcacaatttttggacagtgccacgaaacgtcttaaaga 43302794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 19166729 - 19166649
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||| ||||| ||||| |||||| || ||||||| ||| || |||||| |||||||||||||||| ||||    
T  19166729 tgttttatcctggaggcggcgtggttgatagtctgccgtgcacaattttgggcagtgccacgaaacgtcttaaagagagcg 19166649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 38182237 - 38182325
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaat-ttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| || ||| ||||||||||| || || |||||| |||||||| ||||||| |||| |||||||    
T  38182237 tgttttatcctggaggcggcgtggttgataatctgccttgcacaatcttgggaagtgccacgaaacgttttaaagagagcgacctggtc 38182325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 40125885 - 40125965
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| ||||    
T  40125885 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcg 40125965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 32010659 - 32010605
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgta 140  Q
    ||||||| ||||||| ||||||||||||||||||| |||| ||| ||||||||||    
T  32010659 accatatcgaggtgtcattctcgagcgatttctggcagtgtagcctttaatcgta 32010605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 18876367 - 18876440
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaa 229  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| ||||||||||||||    
T  18876367 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaa 18876440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 17026030 - 17025942
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaat-ttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| || || | ||| ||||||  |||||||||| || || |||||| |||||||||||||||| |||| |||||||    
T  17026030 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 17025942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 17556522 - 17556434
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaat-ttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| || || | ||| ||||||  |||||||||| || || |||||| |||||||||||||||| |||| |||||||    
T  17556522 tgttttatcctggaggcgacgtgattgatagtctgtcttgcacaatgttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 17556434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 17953873 - 17953953
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||| ||||| ||||| ||||| || |||  |||||||||||| ||  |||||| |||||||||||||||||||||    
T  17953873 tgttttatcttggaggcggcgtggttgatattctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagaaagcg 17953953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 33416642 - 33416554
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||| ||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||| | || |||||||    
T  33416642 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaccgacctggtc 33416554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 36683674 - 36683594
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||| | ||| ||||| |||||| |||| ||||| ||| || |||||| |||||||||||||||| ||||    
T  36683674 tgttttatcctggaggcagcgtggttgatagtctgccttacacaattttgggcagtgccacgaaacgtcttaaagagagcg 36683594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 1807565 - 1807487
Alignment:
Q  159 ttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||| ||| ||||| ||||| |||||| |||||||||| ||| || |||| | |||||||||||||||| ||||    
T  1807565 ttttatcctagaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcg 1807487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 236
Target Start/End: Original strand, 28559656 - 28559734
Alignment:
Q  159 ttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||||||||| |||||||| ||||| |||| | ||||||||||||| ||  |||||| |||||||||||| ||| ||||    
T  28559656 ttttatcctgcagacggcgtggttgatagtttgccttgcacaattttggacagtgccacgaaacgtcttatagagagcg 28559734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 37771812 - 37771719
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||| ||||||||||||||| |  | |||||| ||||||||||| |||||||| || |||||||| ||   ||||||||||||||| |||||||    
T  37771812 ctgggttgttttatcctggaggca-cacggttgttagtctacctttcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtc 37771719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 1910969 - 1911054
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    |||||||| |||||| | ||| ||||| |||||| | ||||||||||| |  ||||||| |||||||||||||||| |||| ||||    
T  1910969 tgttttatactggaggcagcgtggttgatagtctgctttgcacaattttgactagtgccacgaaacgtcttaaagagagcgacctg 1911054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 244
Target Start/End: Complemental strand, 32010595 - 32010546
Alignment:
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||| |||||||||||||||| |||||||| | |||| |||||||    
T  32010595 tgcacaattcaggtagtgccgcgaaatgtcttaaaaagagcgacctggtc 32010546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 2965725 - 2965637
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||| ||| ||| | ||||| |||| |  ||||||||| |||||| |||||| |||||||| ||||||| |||| |||||||    
T  2965725 tgttttatcctagaggcggtgtggttgatagtgtgtcttgcacaattttaggcagtgccacgaaacgttttaaagagagcgacctggtc 2965637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 24090722 - 24090634
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||| ||||| || || | ||| || ||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  24090722 tgttttatcttggaggcgacgtgattgatattctgccttgcacaactttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 24090634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 34118561 - 34118473
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||  || || || ||||| |||||| ||||||||||||| ||  ||||||  ||||||||||||||| |||| |||||||    
T  34118561 tgttttatcctaaaggcgacgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 34118473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 211; Significance: 1e-116; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-116
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 3584847 - 3584609
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  3584847 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaaccatattgaggtgttattg 3584748  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3584747 tcgagcgatttatggtagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 3584648  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  3584647 ggtagttccgcgaaacgtcttaaagaaagcgacctggtc 3584609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 10 - 244
Target Start/End: Complemental strand, 5725221 - 5724987
Alignment:
Q  10 tgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattctcga 109  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725221 tgacgaaccattcttttcttccttcttctttggtttctcgagtggcctgcgtaccatattagagtggtttttcgaaaccatattgaggtgttattctcga 5725122  T
Q  110 gcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggta 209  Q
    ||||||||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5725121 gcgatttctggcagtgcagcctttaatcgtacagatagaatctgtgctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggta 5725022  T
Q  210 gtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||| |||||||    
T  5725021 gtgccgcgaaacgtcttaaagaaagcgacctggtc 5724987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 5730351 - 5730113
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  5730351 gtgttgacgaaccgttcttttattcctccttctttggtttctcgagtggtctgtgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 5730252  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||| ||| |||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5730251 tcgagcgatttttggcagtgtagcctttaatcgtacagatagaatctgtgctgttttatcctggagacggtgcggttgctagtctaccttgcacaattta 5730152  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  5730151 ggtagttccgcgaaacgtcttaaagaaagcgacctggtc 5730113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 6 - 230
Target Start/End: Original strand, 48246532 - 48246756
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||    
T  48246532 gtgttgacgaaccgttcttttcttcctccttctttggtttaccgagtggtctacgtaccatataagagtggttttttgaaaccatattgaggtgttattc 48246631  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| | |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  48246632 tcgagcgatttctggcaatgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactta 48246731  T
Q  206 ggtagtgccgcgaaacgtcttaaag 230  Q
    |||||||||||||||||||||||||    
T  48246732 ggtagtgccgcgaaacgtcttaaag 48246756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 11250961 - 11251200
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaa-ccatattgaggtgttatt 104  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||    
T  11250961 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtatcatattagagtggtttttcgaaaaccatattgaggtgttatt 11251060  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    ||||||||||| |||| |||||||  ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  11251061 ctcgagcgattactggcagtgcagtctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactt 11251160  T
Q  205 aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  11251161 aggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 11251200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 37404254 - 37404503
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    |||||||||||||||| |||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  37404254 gtgttgacgaaccgttatttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 37404353  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37404354 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 37404453  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  37404454 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 37404503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 27716700 - 27716451
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  27716700 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 27716601  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||||||||||    
T  27716600 aggtgttattctcgagcgatttctggcagtgcagtctttaatcgtacagttagaatctgggctgttttatcctggagacgacgctgttgctagtctacct 27716501  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  27716500 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 27716451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 37409375 - 37409624
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    |||||||||||||||| |||  |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||           |||||||    
T  37409375 gtgttgacgaaccgttttttctttcctccttctttggtttatcgagtggtctatgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 37409474  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37409475 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggaaacggcgcggttgctagtctacct 37409574  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  37409575 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 37409624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 27711580 - 27711320
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  27711580 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 27711481  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttg----------- 183  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||               
T  27711480 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagatggcgcggttgctaggagacgg 27711381  T
Q  184 --------ctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
            |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  27711380 cgcggttgctagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcg 27711320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 36684644 - 36684802
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  36684644 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 36684743  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  36684744 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 36684802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 28 - 244
Target Start/End: Original strand, 11387671 - 11387917
Alignment:
Q  28 ttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattgaggtgttattctcgagcgattt 116  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||||||||||||||||||||||||    
T  11387671 ttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgttattctcgagcgattt 11387770  T
Q  117 ctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcct-------------------ggagacggcgcggttgctagtctaccttgc 197  Q
    |||  |||||||| ||||||||||||| |||||||||||||||||||||||                   ||||||||||||||||||||||||||||||    
T  11387771 ctgccagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagatggcgcggttgctaggagacggcgcggttgctagtctaccttgc 11387870  T
Q  198 acaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||| ||||||||||||||||||||||||||| |||||| |||||||    
T  11387871 acaacttaggtagtgccgcgaaacgtcttaaaaaaagcgacctggtc 11387917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 93 - 236
Target Start/End: Original strand, 34318160 - 34318303
Alignment:
Q  93 tgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctac 192  Q
    |||||||| ||| ||||||||||||||| |||||||| |||||||||||||  ||||| |||||||||||||||||||||||||||||||||||||||||    
T  34318160 tgaggtgtcattttcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatttgggctgttttatcctggagacggcgcggttgctagtctac 34318259  T
Q  193 cttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||| ||||||||||||||||||||||||||| ||||    
T  34318260 cttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcg 34318303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 10106206 - 10106111
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  10106206 atctgggttgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 10106111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 39747157 - 39747252
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||| || |||||||||||||||||||||||||| |||  |||||||    
T  39747157 atctgggctgttttatcctggagacgacgtggttgctagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcaacctggtc 39747252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 13890916 - 13890821
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||| | ||||| ||||||||||||||||| || ||||||||||| |||||||||||||| |||| |||||||    
T  13890916 atctgggctgttttatcctggagacggtgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacgtcttaaagagagcgacctggtc 13890821  T

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Target: chr1; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 38734378 - 38734283
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||||||||||| |  |||||||||||||||||||||||||| |||| |||||||    
T  38734378 atctggactgttttatcctggagacggcgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacgtcttaaagagagcgacctggtc 38734283  T

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Target: chr1; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 26651160 - 26651253
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||| |||| ||||||||| || | |||||||    
T  26651160 ctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcaaaacatcttaaagagagtgacctggtc 26651253  T

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Target: chr1; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 149 - 241
Target Start/End: Complemental strand, 14582202 - 14582110
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    |||||| |||||||||||||||||||| | ||||| ||||||||||||||||| |  |||||||||||||||| ||||||||| |||| ||||    
T  14582202 atctggactgttttatcctggagacggtgtggttgttagtctaccttgcacaactagggtagtgccgcgaaacttcttaaagagagcgacctg 14582110  T

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Target: chr1; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 5602417 - 5602504
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||||| |||||||||| ||||||||||| ||||| ||||||||||||||||| |  |||||||| ||||||||||||||||| ||||    
T  5602417 atctggactgttttatcttggagacggcgtggttgttagtctaccttgcacaactagggtagtgcagcgaaacgtcttaaagagagcg 5602504  T

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Target: chr1; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 10135551 - 10135463
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||| ||| ||||| ||||| | |||| ||||||||||||| |||||||||| |||||||||||||||| |||| |||||||    
T  10135551 tgttttatcctagaggcggcgtggttgattgtctgccttgcacaattttaggtagtgccacgaaacgtcttaaagagagcgacctggtc 10135463  T

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Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 19799013 - 19799093
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||| ||||| ||||| ||||||  |||||||||||| || ||||||| |||||||||||||||| ||||    
T  19799013 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttggatagtgccacgaaacgtcttaaagagagcg 19799093  T

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Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 51041463 - 51041535
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaa 229  Q
    ||||||||| ||||| ||||| ||||| |||||| ||||||||||||| || |||||| ||||||||||||||    
T  51041463 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaatttgggcagtgccacgaaacgtcttaaa 51041535  T

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Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 149 - 236
Target Start/End: Original strand, 19422866 - 19422957
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctac----cttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||| |||||||||||||| ||||  |||| ||||||||    ||||||||| || |||||||| ||||||||||||||||| ||||    
T  19422866 atctgggctattttatcctggagatggcgtagttgttagtctacctaccttgcacaacttgggtagtgcagcgaaacgtcttaaagagagcg 19422957  T

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Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 41097946 - 41098039
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||||||  |||||||||| ||   ||||||||||||||| |||||||    
T  41097946 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtc 41098039  T

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Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 23192817 - 23192905
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||  |||| ||||| |||||| ||||| |||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  23192817 tgttttatcctggaggaggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 23192905  T

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Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 33301180 - 33301268
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||| | || |||||||    
T  33301180 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagaacgacctggtc 33301268  T

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Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 235
Target Start/End: Original strand, 25188272 - 25188351
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagc 235  Q
    ||||||||| |||||||| | |||||| ||||||||||||||| || | | ||||||||||||||| |||| ||||||||    
T  25188272 tgttttatcttggagacgacacggttgttagtctaccttgcacaaactcaagtagtgccgcgaaacttcttcaagaaagc 25188351  T

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Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 18784549 - 18784622
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaa 229  Q
    |||||||| |||||| ||||| ||||| |||||| |||||||||| |||||| |||||| ||||| ||||||||    
T  18784549 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaatgtcttaaa 18784622  T

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Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 16649613 - 16649700
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||| |||| ||||| ||||| ||||||| |||||||||||| ||  |||||| | |||||||||||||| |||| |||||||    
T  16649613 tgttttatcccggaggcggcgtggttgatagtctatcttgcacaattttggacagtgccac-aaacgtcttaaagagagcgacctggtc 16649700  T

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Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 40166075 - 40165995
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||| ||| |||||  |||| |||||| |||||||||| ||| || |||||| |||||||||||||||| ||||    
T  40166075 tgttttatcctagaggcggcgttgttgttagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcg 40165995  T

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Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 47451225 - 47451313
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||| ||||| ||||| ||||| ||||||  ||||||||| ||| || ||||||  ||||||||||||||| |||| |||||||    
T  47451225 tgttttatcttggaggcggcgtggttgatagtctgtcttgcacaatttttggcagtgccatgaaacgtcttaaagagagcgacctggtc 47451313  T

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Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 47455386 - 47455474
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  | |||| |||||||||||||||| |||| |||||||    
T  47455386 tgttttatcctggaggcggcgtggttgataatctgtcttgcacaattttggacattgccacgaaacgtcttaaagagagcgacctggtc 47455474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 201
Target Start/End: Complemental strand, 33055139 - 33055090
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa 201  Q
    ||||||||||||||||||||| | || |||||| |||||||||||||||||    
T  33055139 ctgggctgttttatcctggaggc-gcacggttgatagtctaccttgcacaa 33055090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 10140184 - 10140099
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttag-gtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||||| |||  |||| ||||| | |||| ||||||||||||| | |||||||| |||||||| ||||||| |||| ||||    
T  10140184 tgttttatcctagaggtggcgtggttgattgtctgccttgcacaattttgagtagtgccacgaaacgtgttaaagagagcgacctg 10140099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 12260091 - 12260011
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||||||||||  |||||||| ||||| ||||||  ||||||||| ||| || |||| | |||||||||||||||| ||||    
T  12260091 tgttttatcctaaagacggcgtggttgatagtctgtcttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcg 12260011  T

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Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 41393491 - 41393253
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  41393491 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgaaccatattagagtggtttttcgaaaccatattgaggtgttattc 41393392  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  41393391 tcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgtgctgttttatcctggagacggcgcggttgctagtctaccttgcacaactta 41393292  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  41393291 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 41393253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 51019222 - 51019460
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  51019222 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaaccatattgaagtgttattc 51019321  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| | |||||| ||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  51019322 tcgagcgatttctggcaatgcagcatttaatcgtacagttagaatctgggatgttttatcctggagacggcgcggttgctagtctaccttgcacaactta 51019421  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  51019422 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 51019460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 53797875 - 53797637
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||| ||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  53797875 gtgttgacgaactgttcttttcttcctccttctttggttttttgagtggtctacgtgccatattagagtggtttttcgaaaccatattgaggtgttattc 53797776  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||| | |||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53797775 tcgagcgatttctagcagtgcagcctttaatcgtacagaaagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 53797676  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  53797675 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 53797637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 54991733 - 54991494
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaa-ccatattgaggtgttatt 104  Q
    ||||||||||||||||||||  || ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||    
T  54991733 gtgttgacgaaccgttctttcttttctccttctttggtttatcgagtggtttacgtaccatattagagtggtttttcgaaaaccatattgaggtgttatt 54991634  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    |||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  54991633 ctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactt 54991534  T
Q  205 aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  54991533 aggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 54991494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 6 - 236
Target Start/End: Complemental strand, 13710915 - 13710684
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctcct-tctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttatt 104  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  13710915 gtgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaaccatactgaggtgttatt 13710816  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    |||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13710815 ctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactt 13710716  T
Q  205 aggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||||||||||||||||||||    
T  13710715 aggtagtgccgcgaaacgtcttaaagaaagcg 13710684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 8980123 - 8980372
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  8980123 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 8980222  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8980223 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 8980322  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  8980323 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 8980372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 8985243 - 8985492
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  8985243 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 8985342  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8985343 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 8985442  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  8985443 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 8985492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 13700767 - 13700518
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  13700767 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 13700668  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13700667 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 13700568  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  13700567 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 13700518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 21299671 - 21299920
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  21299671 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 21299770  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21299771 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 21299870  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  21299871 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 21299920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 21304791 - 21305040
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  21304791 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 21304890  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||| | ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21304891 aggtgttattctcgagcgatttctggcagtgcaacctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 21304990  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||| ||||||||||||||| |||||||    
T  21304991 tgcacaacttaggtagtgccgcgaaaagtcttaaagaaagcgacctggtc 21305040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 13695408 - 13695167
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatatt-gaggtgttatt 104  Q
    |||||||| |||| |||||||| ||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||| |||||||||||    
T  13695408 gtgttgacaaaccattcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaaccatatttgaggtgttatt 13695309  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacagat--agaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaat 202  Q
    |||||||||||||||| |||||||| ||||||||||||| |  ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  13695308 ctcgagcgatttctggcagtgcagcctttaatcgtacagttttagaatctaggctgttttatcctggagacggcgcggttgctagtctaccttgcacaac 13695209  T
Q  203 ttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  13695208 ttaggtagtgccgcgaaacatcttaaagaaagcgacctggtc 13695167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 9763866 - 9764108
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggttttt-----------cgaaaccatattg 94  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||           |||||||||||||    
T  9763866 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtata-------tattagagtggttttttcgaaacttttcgaaaccatattg 9763958  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||| ||||||| ||||||| ||||||||||    
T  9763959 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctagagacggtgcggttgttagtctacct 9764058  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||| |||||| |||||||| | ||| |||||||    
T  9764059 tgcacaacttaggtagtgccacgaaacatcttaaagtaggcgacctggtc 9764108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 47046155 - 47046394
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcc-tccttctttggtttctcgagtggtctacgtaccatattagagtggtttt---------tcgaaaccatattga 95  Q
    |||||||||||||||||||||||||| ||| |||||||||||||| ||||||| ||| ||||||||||||||||||         ||||||||||| |||    
T  47046155 gtgttgacgaaccgttcttttcttccctccctctttggtttctcgggtggtctgcgtgccatattagagtggttttcgaaacttttcgaaaccatactga 47046254  T
Q  96 ggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 195  Q
    ||||||||||||||||||||||||| ||||         ||||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  47046255 ggtgttattctcgagcgatttctggcagtg---------atcgtacagtttgaatctgagctgttttatcctggagacggcgcggttgctagtctacctt 47046345  T
Q  196 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||| ||||||||||||||||||||||||||||||| || |||||||    
T  47046346 gcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtc 47046394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 85 - 244
Target Start/End: Complemental strand, 36354343 - 36354184
Alignment:
Q  85 aaccatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgc 184  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  36354343 aaccatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgc 36354244  T
Q  185 tagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  36354243 tagtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 36354184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 36359460 - 36359302
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  36359460 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 36359361  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  36359360 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 36359302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 40004193 - 40004035
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  40004193 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 40004094  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  40004093 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 40004035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 54348523 - 54348365
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  54348523 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 54348424  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  54348423 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 54348365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 39999235 - 39999077
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||| ||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  39999235 accatatcgaggtgtcattctcgagcgatttctggcagtgtagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 39999136  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  39999135 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 39999077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 54343369 - 54343211
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  54343369 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctgtagacggcgcggttgct 54343270  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||    
T  54343269 agtctaccttgcacaattcgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 54343211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 653146 - 653051
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  653146 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 653051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 10120801 - 10120893
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||| ||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| ||||    
T  10120801 atctgggctattttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctg 10120893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 37259877 - 37259965
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttag-gtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||||| | |||||||| ||||||||||||||||||||| |||||||    
T  37259877 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagaaagcgacctggtc 37259965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 149 - 241
Target Start/End: Original strand, 8083019 - 8083112
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||||||||||| ||||| ||||||||||| ||||||||||||||| || || | |||||||| ||||||||||||||| |||| ||||    
T  8083019 atctgggctgttttatcttggaggcggcgcggttgttagtctaccttgcactaacttggatagtgccgtgaaacgtcttaaagagagcgacctg 8083112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 31269129 - 31269041
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| |||||| |||||| |||||||||||||||| |||| |||||||    
T  31269129 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggcagtgccacgaaacgtcttaaagagagcgacctggtc 31269041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 24490132 - 24490047
Alignment:
Q  152 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||||||||  |||||||||| |||||||||||||||||  | | | |||| |||||||||||||||||| ||||    
T  24490132 tgggctgttttatcctggaggtggcgcggttgttagtctaccttgcacaaacttgattagtgtcgcgaaacgtcttaaagagagcg 24490047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 5271419 - 5271507
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  5271419 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 5271507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 13521992 - 13522080
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  13521992 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 13522080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 31273616 - 31273528
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  31273616 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 31273528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 37264564 - 37264652
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||| || ||| || |||||| |||||||||||||||| |||| |||||||    
T  37264564 tgttttatcctggaggcggcgtggttgatagtctgccttgcataattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 37264652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 231
Target Start/End: Complemental strand, 31765981 - 31765906
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaaga 231  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| ||||||||||||||||    
T  31765981 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaaga 31765906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 236
Target Start/End: Original strand, 30564412 - 30564494
Alignment:
Q  155 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||| ||| |||| |  ||| ||||||||||||||||| ||| |||||||||||||||||||||| ||| ||||    
T  30564412 gctgttttatcctcgaggcggcacaattgttagtctaccttgcacaaatttgggtagtgccgcgaaacgtcttacagagagcg 30564494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 155 - 236
Target Start/End: Complemental strand, 34644655 - 34644573
Alignment:
Q  155 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||||||||||||| || ||||||||||| |||| |||||| |||||  | || ||||| |||||||||||||||||||||||    
T  34644655 gctgttttatcctgtaggcggcgcggttgttagtttaccttacacaaactcggatagtgtcgcgaaacgtcttaaagaaagcg 34644573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 31729387 - 31729472
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||||||||| ||||| | ||| | |||| |||||||||| ||| ||||||||| |||||||||||||||| |||| ||||    
T  31729387 tgttttatcctggaggcggcgtgattgattgtctgccttgcacaattttgggtagtgccacgaaacgtcttaaagagagcgacctg 31729472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 95 - 140
Target Start/End: Original strand, 54990687 - 54990732
Alignment:
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgta 140  Q
    ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  54990687 aggtgttattctcgagcaatttctggtagtgcagcctttaatcgta 54990732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 17359633 - 17359547
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||| ||||| |||||||||  ||||| |||| |||||||||||| ||||  | || |||||||| ||||||||||||||||||||    
T  17359633 ctgggttgtttaatcctggaggtggcgcagttgttagtctaccttgaacaaactcgggtagtgccgggaaacgtcttaaagaaagcg 17359547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 5928219 - 5928307
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttag-gtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||| | ||||| |||||| ||||||||||||| | | |||||| | |||| ||||||||| |||| |||||||    
T  5928219 tgttttatcctggaggcggtgtggttgatagtctgccttgcacaattttgagcagtgccactaaacatcttaaagagagcgacctggtc 5928307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 8693806 - 8693718
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||| ||| ||||| ||||| |||| |  |||||||||||| || ||| ||| |||||||||||||||| |||| |||||||    
T  8693806 tgttttatccttgaggcggcgtggttgatagtatgtcttgcacaattttgggtagcgccacgaaacgtcttaaagagagcgacctggtc 8693718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 12823895 - 12823983
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||| |  ||||||||| ||| || |||||| ||||| |||||||||| |||| |||||||    
T  12823895 tgttttatcctggaggcggcgtggttgatagtttgtcttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtc 12823983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 16421124 - 16421036
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||| || ||||| ||||| |||||| |||||||||| ||| || |||||| ||||| ||||||| || |||| |||||||    
T  16421124 tgttttatcctgtaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaatgagagcgacctggtc 16421036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 33463356 - 33463444
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| |||||  | ||| |||||||||| || ||  |||||| |||||||||||||||| |||| |||||||    
T  33463356 tgttttatcctggaggcggcggggttgacaatctgccttgcacaactttggacagtgccacgaaacgtcttaaagagagcgacctggtc 33463444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 51698012 - 51697965
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||||||    
T  51698012 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattt 51697965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 44
Target Start/End: Original strand, 54990648 - 54990686
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtt 44  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  54990648 gtgttgacgaaccgttctttctttcctccttctttggtt 54990686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 8030476 - 8030561
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||||||||| | |||  |||| ||||||| ||||||||| ||| || |||||| | |||||||||||||| |||| ||||    
T  8030476 tgttttatcctggaggcagcgttgttgatagtctatcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctg 8030561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 16953180 - 16953107
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaa 229  Q
    ||||||||||||||| ||  | ||||| |||||| |||||||||| ||| |||||| || ||||||||||||||    
T  16953180 tgttttatcctggaggcgttgtggttgatagtctgccttgcacaattttgggtagtaccacgaaacgtcttaaa 16953107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 19102072 - 19101999
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttag-gtagtgccgcgaaacgtcttaaa 229  Q
    ||||||||||||||| || || ||||| ||||||   ||||||||||| | |||||||| ||||||||||||||    
T  19102072 tgttttatcctggaggcgacgtggttgatagtctgttttgcacaattttgagtagtgccacgaaacgtcttaaa 19101999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 55251814 - 55251741
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaa 229  Q
    |||||||||||||||  |||| ||||| ||||||  |||||||||||| ||  |||||| ||||||||||||||    
T  55251814 tgttttatcctggaggtggcgtggttgatagtctgtcttgcacaattttggacagtgccacgaaacgtcttaaa 55251741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 2819939 - 2819851
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||  ||||  ||| | |||||||||||||||||||| ||  ||| || |||||| ||||||||||| || |||||||    
T  2819939 tgttttatcctggacgcggcatggtagatagtctaccttgcacaattttggacagtaccacgaaacatcttaaagaaaacgacctggtc 2819851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 10318779 - 10318823
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa 201  Q
    |||| |||||| ||| ||||||||||| |||||||||||||||||    
T  10318779 tgttctatcctagaggcggcgcggttgttagtctaccttgcacaa 10318823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 178 - 241
Target Start/End: Complemental strand, 39319706 - 39319642
Alignment:
Q  178 cggttgctagtctaccttgcacaatttag-gtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    |||||| |||||||||||||||||  | | |||||| || |||||||||||||||||||| ||||    
T  39319706 cggttgttagtctaccttgcacaaactcgagtagtgtcgtgaaacgtcttaaagaaagcgacctg 39319642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 199; Significance: 1e-108; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 28751578 - 28751816
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||    
T  28751578 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcaaaaccatattgaggtgttattc 28751677  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||    
T  28751678 tcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggtgcggttgcttgtctaccttgcacaactta 28751777  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  28751778 ggtagtgccgcgaaacgtctaaaagaaagcgacctggtc 28751816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 169; E-Value: 9e-91
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 40518310 - 40518559
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttcttt-ggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catatt 93  Q
    |||||||||||||||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||           ||||||    
T  40518310 gtgttgacgaaccgttcttt-cttcctccttcttttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaactttttgaaaaccatatt 40518408  T
Q  94 gaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacc 193  Q
    ||||||||||||||||||||||| ||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40518409 gaggtgttattctcgagcgatttttggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacc 40518508  T
Q  194 ttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||| |||||||||||||||||||||||||||||||||||| |||||||    
T  40518509 ttgcactatttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 40518559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 6 - 233
Target Start/End: Complemental strand, 40392576 - 40392338
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  40392576 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 40392477  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||| |||||||||||||||||||||||||| ||||||||||||||||    
T  40392476 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatttgggctgttttatcctggagacggcgtggttgctagtctacct 40392377  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaa 233  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  40392376 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaa 40392338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 42723380 - 42723538
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  42723380 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 42723479  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  42723480 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 42723538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 42728549 - 42728707
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  42728549 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 42728648  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  42728649 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 42728707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 44096468 - 44096310
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  44096468 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44096369  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  44096368 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 44096310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 44754525 - 44754683
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  44754525 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44754624  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  44754625 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 44754683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 44759691 - 44759849
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  44759691 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 44759790  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  44759791 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 44759849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 6 - 105
Target Start/End: Original strand, 4163426 - 4163525
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  4163426 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 4163525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 152 - 244
Target Start/End: Complemental strand, 42914742 - 42914650
Alignment:
Q  152 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | || |||||||    
T  42914742 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagagaacgacctggtc 42914650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 5089376 - 5089286
Alignment:
Q  154 ggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||| || | |||||||||||||||||||||||| |||| |||||||    
T  5089376 ggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtc 5089286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 30658358 - 30658270
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttag-gtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||||| | |||||||| |||||||||||||||| |||| |||||||    
T  30658358 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgagtagtgccacgaaacgtcttaaagagagcgacctggtc 30658270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 9180724 - 9180812
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||||| ||  |||||| |||||||||||||||| |||| |||||||    
T  9180724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtc 9180812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 10160724 - 10160812
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  10160724 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 10160812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 1934993 - 1935081
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  1934993 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 1935081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 9189803 - 9189891
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||||| ||  |||||| |||||||||||||||| |||  |||||||    
T  9189803 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcaacctggtc 9189891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 18344526 - 18344438
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||  |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  18344526 tgttttatcctggagccggcgtggttaatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 18344438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 236
Target Start/End: Original strand, 11658882 - 11658968
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttag-gtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||| |||||||||| ||||| ||| || |||| ||||||||||||||||| || | ||||||||| |||| |||||||||||||||    
T  11658882 ctggactgttttatcatggaggcggtgcagttgttagtctaccttgcacaaattcgagtagtgccgtgaaatgtcttaaagaaagcg 11658968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 30651024 - 30650944
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||| ||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| ||||    
T  30651024 tgttttatcttggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcg 30650944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 161 - 241
Target Start/End: Original strand, 42926763 - 42926846
Alignment:
Q  161 ttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaac--gtcttaaagaaagcggcctg 241  Q
    ||||||||||| ||||| ||||| ||||||||||||||||| ||| || |||||| ||||||  |||||||||| |||||||||    
T  42926763 ttatcctggaggcggcgtggttgatagtctaccttgcacaattttgggcagtgccacgaaacgtgtcttaaagagagcggcctg 42926846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 25478297 - 25478384
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggt 243  Q
    |||||||| |||||| ||||| ||||| |||||| |||||||||| ||| || |||| | |||||||||||||||| |||| ||||||    
T  25478297 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgtcacgaaacgtcttaaagagagcgacctggt 25478384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 155 - 229
Target Start/End: Complemental strand, 28945266 - 28945191
Alignment:
Q  155 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttag-gtagtgccgcgaaacgtcttaaa 229  Q
    ||||||||||||||||| |  |||||||| |||| ||||||||||||  | | |||||||||||||||||||||||    
T  28945266 gctgttttatcctggaggcaacgcggttgttagtataccttgcacaaactcgtgtagtgccgcgaaacgtcttaaa 28945191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 159 - 236
Target Start/End: Complemental strand, 29677474 - 29677396
Alignment:
Q  159 ttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||| ||||| ||||| |||||| | |||||||| ||| || |||||| |||||||||||||||| ||||    
T  29677474 ttttatcctggaggcggcgtggttgatagtctgctttgcacaattttgggcagtgccacgaaacgtcttaaagagagcg 29677396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 244
Target Start/End: Complemental strand, 160137 - 160048
Alignment:
Q  156 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||  |||| || |||||||| ||| ||||||||||||| ||| ||||||| || ||||||| ||||||| |||| |||||||    
T  160137 ctgttttatctcggaggcgacgcggttgatagcctaccttgcacaattttgggtagtgtcgtgaaacgtattaaagagagcgacctggtc 160048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 6297886 - 6297973
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| |  | |||||| ||||||||||||||||||||  |||||||||| ||   ||||||||||||||| |||||||    
T  6297886 tgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtc 6297973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 12797020 - 12796940
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||||||||| ||||| ||||||  |||| |||| ||| || |||||| | |||||||||||||| ||||    
T  12797020 tgttttatcctggagacggcgtggttgatagtctgtcttgaacaattttgggcagtgccacaaaacgtcttaaagagagcg 12796940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 19578414 - 19578494
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||| ||||||| | ||  ||||| |||||| ||||||||||||| |||||||||| | |||||||||||||| ||||    
T  19578414 tgttttaccctggaggcagcatggttgatagtcttccttgcacaattttaggtagtgccacaaaacgtcttaaagagagcg 19578494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 19892466 - 19892554
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||   ||||||||||| ||  ||||||  ||||||||||||||| |||| |||||||    
T  19892466 tgttttatcctggaggcggcgtggttgatagtctgtgttgcacaattttggacagtgccaggaaacgtcttaaagagagcgacctggtc 19892554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 25497325 - 25497413
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||| ||||| || ||||   |||||||||||||||| |||| |||||||    
T  25497325 tgttttatcctggaggcggcgtggttgatagtctgacttgcacaaatttgggcagtgttacgaaacgtcttaaagagagcgacctggtc 25497413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 31326834 - 31326746
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||  |||| ||||| |||||| |||||||||| ||| || |||| |  ||||||||||||||| |||| |||||||    
T  31326834 tgttttatcctggaggtggcgtggttgatagtctgccttgcacaattttgggcagtggcatgaaacgtcttaaagagagcgacctggtc 31326746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 35602017 - 35601929
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| || |||  |||||||||||| ||  |||||| |||||||||||||| | |||| |||||||    
T  35602017 tgttttatcctggaggcggcgtggttgatactctgtcttgcacaattttggacagtgccacgaaacgtcttaaaaagagcgacctggtc 35601929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 180 - 244
Target Start/End: Complemental strand, 19538458 - 19538393
Alignment:
Q  180 gttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||| |||||||||||||||||  | || |||||||| |||| ||||||||||||||| |||||||    
T  19538458 gttgttagtctaccttgcacaaactcggatagtgccgtgaaatgtcttaaagaaagcgacctggtc 19538393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 7737851 - 7737931
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| | |||| ||||||||| ||||    
T  7737851 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacttcttaaagagagcg 7737931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0594 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0594
Description:

Target: scaffold0594; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 9057 - 9295
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  9057 gtgttgacgaactgttcttttcttcctccttgtttggtttctcgagtggtttgcgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 9156  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    |||||| |||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||    
T  9157 tcgagcaatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtcttccttgcacaactta 9256  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  9257 ggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 9295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 192; Significance: 1e-104; HSPs: 2)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 13588 - 13827
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctcct-tctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttatt 104  Q
    ||||||||||||| |||||||||||||||  |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  13588 gtgttgacgaaccattcttttcttcctcccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaaccatactgaggtgttatt 13687  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    |||||||||||||||| |||||||| |||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  13688 ctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaactt 13787  T
Q  205 aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  13788 aggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 13827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166; HSP #2
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 19041 - 19277
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccata-ttgaggtgttatt 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||||| |||||||||||||    
T  19041 gtgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaaccatatttgaggtgttatt 19140  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacag--atagaatctgggctgttttatcctggagacgg---cgcggttgctagtctaccttgcac 199  Q
    |||||||||||||||| |||| | | |||||||||||||   |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  19141 ctcgagcgatttctggcagtgaaacctttaatcgtacagttttagaatctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcac 19240  T
Q  200 aatttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    || ||||||||||||||||||||||||||||||||||    
T  19241 aacttaggtagtgccgcgaaacgtcttaaagaaagcg 19277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 192; Significance: 1e-104; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 6 - 241
Target Start/End: Original strand, 1413901 - 1414135
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  1413901 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctgc-taccatattagagtggtttttcgaaaccatattgaggtgttattc 1413999  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||    
T  1414000 tcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgagttgttttatcttggagacggcgcggttgctagtctaccttgcacaactta 1414099  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||||||||||||||||||||||||| ||||    
T  1414100 ggtagtgccgcgaaacgtcttaaagaaagcgacctg 1414135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 26709349 - 26709110
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  26709349 gtgttgatgaaccattcttttcttcctccttctttggtttctcgagtggtctg-gtaccatattagagtggtttttcgaaaccatattgaggtgttattc 26709251  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatt 203  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||  |||||||    
T  26709250 tcgagcgattactggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatt 26709151  T
Q  204 taggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  26709150 taggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 26709110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 26979083 - 26978844
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  26979083 gtgttgatgaaccattcttttcttcctccttctttggtttctcgagtggtctg-gtaccatattagagtggtttttcgaaaccatattgaggtgttattc 26978985  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttg--cacaatt 203  Q
    |||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||  |||||||    
T  26978984 tcgagcgattactggcagtgcagcctttaatcgtacagatagaatctgggctgttttatcctggagatgacgcggttgctagtctaccttgcacacaatt 26978885  T
Q  204 taggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  26978884 taggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 26978844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 17510315 - 17510066
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaa-----------ccatattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||           ||||||||    
T  17510315 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaattttttgaaaaccatattg 17510216  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17510215 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 17510116  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  17510115 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 17510066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 36254082 - 36253834
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac----------catattga 95  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||          ||||||||    
T  36254082 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtttgcgtaccatattagagtggtttttcgaaacttttcgaaaccatattga 36253983  T
Q  96 ggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 195  Q
    ||||||||||||||||||||||| | |||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36253982 ggtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggaggcggcgcggttgctagtctacctt 36253883  T
Q  196 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||| |||||||||||||||||||||||||||||||||| |||||||    
T  36253882 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 36253834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 17505210 - 17504961
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  17505210 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 17505111  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||| ||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  17505110 aggtgttattctcgagggatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacgacgcggttgctagtctacct 17505011  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| ||||||||||||||||||||||||||||||| || |||||||    
T  17505010 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaaacgacctggtc 17504961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 42019830 - 42019581
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||| ||||||  |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||           |||||||    
T  42019830 gtgttgacgaaccattctttctttcctccttctttggtttatcgagtggtttacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 42019731  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  42019730 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcacggttgctagtctacct 42019631  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  42019630 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 42019581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 6 - 241
Target Start/End: Complemental strand, 41858850 - 41858604
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||| ||||||||||| ||||||||||||| ||||||||||||||||||||| |||||           |||||||    
T  41858850 gtgttgacgaaccgttctttctttcctcattctttggtttatcgagtggtctacataccatattagagtggttttttgaaacttttcgaaaaccatattg 41858751  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41858750 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 41858651  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||| ||||||||||||| |||||||||||||||||||| ||||    
T  41858650 tgcacaacttaggtagtgccgtgaaacgtcttaaagaaagcgacctg 41858604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 24776658 - 24776894
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccata-ttgaggtgttatt 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||||| |||||||||||||    
T  24776658 gtgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaaccatatttgaggtgttatt 24776757  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacag--atagaatctgggctgttttatcctggagacgg---cgcggttgctagtctaccttgcac 199  Q
    |||||||||||||||| |||| | | |||||||||||||   |||||||||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  24776758 ctcgagcgatttctggcagtgaatcctttaatcgtacagttttagaatctgggctgttttatcctggagacggcgccgcggttgctagtctaccttgcac 24776857  T
Q  200 aatttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    || ||||||||||||||||||||||||||||||||||    
T  24776858 aacttaggtagtgccgcgaaacgtcttaaagaaagcg 24776894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 154; E-Value: 8e-82
Query Start/End: Original strand, 12 - 244
Target Start/End: Complemental strand, 41853799 - 41853556
Alignment:
Q  12 acgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattgaggtgt 100  Q
    ||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||||||||    
T  41853799 acgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattgaggtgt 41853700  T
Q  101 tattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcaca 200  Q
    |||||||||||||||||||| |||| ||| ||||||||||||| ||||||||||||||||||||| | |||||||||||||||||||||||| |||||||    
T  41853699 tattctcgagcgatttctggcagtgtagcctttaatcgtacagttagaatctgggctgttttatcgtagagacggcgcggttgctagtctactttgcaca 41853600  T
Q  201 atttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    | |||||||||| ||||||||||||||||||||||| |||||||    
T  41853599 acttaggtagtgtcgcgaaacgtcttaaagaaagcgacctggtc 41853556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 24771203 - 24771444
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatatt-gaggtgttatt 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| | ||| | |||| |||| |||||||||||||||||| |||| |||||||||||    
T  24771203 gtgttgacgaaccgttcttttcctcctccttctttggtttctcgagcgatctgcataccgtatttgagtggtttttcgaaaccgtatttgaggtgttatt 24771302  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacagat--agaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaat 202  Q
    |||||||||||||| | |||| ||| ||||||||||||| |  |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||     
T  24771303 ctcgagcgatttctagcagtgtagcctttaatcgtacagttttagaatctgggttgttttatcctggagacggcgcggttgttagtctaccttgcacaac 24771402  T
Q  203 ttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||| |||||||||||||| |||||||    
T  24771403 ttaggtagtgccgcgaaacatcttaaagaaagcgacctggtc 24771444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 6 - 175
Target Start/End: Complemental strand, 43579917 - 43579737
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaacc-----------atattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||            ||||||    
T  43579917 gtgttgacgaaccgttctttctttcctccttctttggtttattgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaactatattg 43579818  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacgg 175  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||    
T  43579817 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacgg 43579737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 13582682 - 13582777
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  13582682 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaaattgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 13582777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 7805174 - 7805079
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| || | |||||||    
T  7805174 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagggacctggtc 7805079  T

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Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 14374238 - 14374143
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||| ||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  14374238 atctgggctgttttatcctggagacggcgtggttgttagtctaccctgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 14374143  T

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Target: chr5; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Original strand, 24435861 - 24435956
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || | |||||||||||||||||||||||| |||| |||||||    
T  24435861 atctgggctgttttatcctggagacggcgtggttgatagtctaccttgcacaacttggatagtgccgcgaaacgtcttaaagagagcgacctggtc 24435956  T

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Target: chr5; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 37248795 - 37248883
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||||||||||||| ||||| |||||||||| |||| |||||||    
T  37248795 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttaggtagtgccacgaaatgtcttaaagagagcgacctggtc 37248883  T

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Target: chr5; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 12103120 - 12103032
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  12103120 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 12103032  T

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Target: chr5; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 26667367 - 26667279
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  26667367 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 26667279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 26938964 - 26938876
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  26938964 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 26938876  T

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Target: chr5; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 29167973 - 29168061
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  29167973 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 29168061  T

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Target: chr5; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 36423732 - 36423644
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||| |||||| ||||| ||||| |||||| ||||||||||||| ||  ||||||||||||||||||||||| |||| |||||||    
T  36423732 tgttttattctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccgcgaaacgtcttaaagagagcgacctggtc 36423644  T

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Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 556790 - 556702
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| | |||||||||||||| |||| |||||||    
T  556790 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtc 556702  T

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Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 561562 - 561474
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| | |||||||||||||| |||| |||||||    
T  561562 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtc 561474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 7451853 - 7451765
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| | ||| ||||| |||||| ||||||||||||| ||  |||||| |||||||||||||||| |||| |||||||    
T  7451853 tgttttatcctggaggcagcgtggttgatagtctgccttgcacaattttggacagtgccacgaaacgtcttaaagagagcgacctggtc 7451765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 36428804 - 36428716
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || ||| |||| |||||||||||||| |||| |||||||    
T  36428804 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagttccgcaaaacgtcttaaagagagcgacctggtc 36428716  T

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Target: chr5; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 36937511 - 36937599
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || ||||||  ||||||||||||||| |||| |||||||    
T  36937511 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 36937599  T

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Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 36942265 - 36942353
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || ||||||  ||||||||||||||| |||| |||||||    
T  36942265 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccatgaaacgtcttaaagagagcgacctggtc 36942353  T

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Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 21323960 - 21324053
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||| |  | |||||| |||||||||||||||||||| || |||||||| ||   ||||||||||||||| |||||||    
T  21323960 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcggatagtgccgtgatttgtcttaaagaaagcgacctggtc 21324053  T

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Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 28857958 - 28857885
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaa 229  Q
    |||||||||||| || ||||| ||||| | |||||||||||||||  | |||||||||||||||||||||||||    
T  28857958 tgttttatcctgtaggcggcgtggttgttggtctaccttgcacaaactcaggtagtgccgcgaaacgtcttaaa 28857885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 35679875 - 35679960
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| |  |||||| |||||||||||||||| |||| ||||    
T  35679875 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaatttttgacagtgccacgaaacgtcttaaagagagcgacctg 35679960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 12501899 - 12501987
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||   |||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  12501899 tgttttatcctggaggcggcgtggttgatagtctgttttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 12501987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 13301482 - 13301573
Alignment:
Q  153 gggctgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||| |  | |||||| ||||||||||||||||| ||| |||||||||| ||   ||||||||||||||| |||||||    
T  13301482 gggctgttttatcctggaggca-cacggttgttagtctaccttgcacaattttgggtagtgccgtgatttgtcttaaagaaagcgacctggtc 13301573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 32461549 - 32461637
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| | |||||||||||||| |||| |||||||    
T  32461549 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacaaaacgtcttaaagagagcgacctggtc 32461637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 39518505 - 39518417
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| || ||||||| ||| ||  ||||| |||||||||||||||| |||| |||||||    
T  39518505 tgttttatcctggaggcggcgtggttgatagtctgccatgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtc 39518417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 39523144 - 39523056
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||||||||| ||| ||  ||||| |||||||||||||||| |||| |||||||    
T  39523144 tgttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcggtgccacgaaacgtcttaaagagagcgacctggtc 39523056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 42001529 - 42001441
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggt-agtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||| |||||||| ||  |||||| |||||||||||||||| |||| |||||||    
T  42001529 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 42001441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 6514601 - 6514676
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaaga 231  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||| || ||| || |||||| ||||||||||||||||    
T  6514601 tgttttatcctggaggcggcgtggttgatagtctgccttgcaaaattttgggcagtgccacgaaacgtcttaaaga 6514676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 244
Target Start/End: Complemental strand, 31731644 - 31731551
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||||||  |||||||||  ||   ||||||||||||||| |||||||    
T  31731644 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccctgatttgtcttaaagaaagcgacctggtc 31731551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 10759820 - 10759893
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaa 229  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| | ||||||||||||    
T  10759820 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacaaaacgtcttaaa 10759893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 12045139 - 12045227
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||| | ||||||  ||||||||| ||| || |||||| ||||||||||||||||  ||| |||||||    
T  12045139 tgttttatcctggaggcggcgtggtcgatagtctgtcttgcacaattttgggcagtgccacgaaacgtcttaaagagggcgacctggtc 12045227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 41996760 - 41996672
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| ||||||  ||| ||||| ||| || |||||| |||||||||||||||| |||  |||||||    
T  41996760 tgttttatcctggaggcggcgtggttgatagtctgtcttacacaattttgggcagtgccacgaaacgtcttaaagagagcaacctggtc 41996672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 159 - 241
Target Start/End: Complemental strand, 40147988 - 40147905
Alignment:
Q  159 ttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||||||| ||||| ||||| ||||||  ||||||||| ||| || |||||| |||||| ||||||||| |||| ||||    
T  40147988 ttttatcctggaggcggcgtggttgatagtctgtcttgcacaattttgggcagtgccacgaaacatcttaaagagagcgacctg 40147905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 3666027 - 3665947
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||| |||  |||| ||||| |||||| |||||||||| ||| || |||||| ||||||||||| |||| ||||    
T  3666027 tgttttatcctagaggtggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttgaagagagcg 3665947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 12041932 - 12042020
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcaca-atttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||| | ||||||| |  ||| || |||||| |||||||||||||||| | || |||||||    
T  12041932 tgttttatcctggaggcggcgtggttgatagtttgccttgcatatttttgggcagtgccacgaaacgtcttaaagagaacgacctggtc 12042020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 12102831 - 12102911
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||| ||||| | ||||| |||||| ||||||||||||| ||  |||||| | ||| |||||||||| ||||    
T  12102831 tgttttatcctggtgacggtgtggttgatagtcttccttgcacaattttggccagtgccacaaaaagtcttaaagagagcg 12102911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 31986822 - 31986742
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgca-caatttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||||||||||| || ||||||  ||| || |||||||||||  || |  ||||||| |||||||||||||||||||||||    
T  31986822 tgttttatcctgaaggcggcgcaattgttaatctaccttgcataaactcgggtagtgtcgcgaaacgtcttaaagaaagcg 31986742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 42024610 - 42024566
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcga 50  Q
    ||||||||||| ||||||||  |||||||||||||||||| ||||    
T  42024610 gtgttgacgaatcgttctttctttcctccttctttggtttttcga 42024566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 2817996 - 2818234
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 105  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  2817996 gtgttgacgaaccgttcttttcttcctccttgtttggtttctcgagtggtctgcgtaccatattagagtggtttttcgaaaccatattgaggtgttattc 2818095  T
Q  106 tcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattta 205  Q
    ||||||||||||||| |||||| | |||||||||||||| |||||||| |||||||||||||||||||||||||||| |||||||||||||||||| |||    
T  2818096 tcgagcgatttctggcagtgcaacctttaatcgtacagaaagaatctgagctgttttatcctggagacggcgcggtttctagtctaccttgcacaactta 2818195  T
Q  206 ggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||  ||| ||||||||||||||||||| |||||||    
T  2818196 ggtagtaacgcaaaacgtcttaaagaaagcgacctggtc 2818234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 31981809 - 31981568
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatatt-gaggtgttatt 104  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||| |||||||||||    
T  31981809 gtgttgacgaaccgttcttttcctcctccttctttggtttctcgagcggtctgcgtaccgtatttgagtggtttttcgaaaccatatttgaggtgttatt 31981710  T
Q  105 ctcgagcgatttctggtagtgcagcttttaatcgtacagat--agaatctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaat 202  Q
    |||||||||||||||| |||||||| ||||||||||||| |  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31981709 ctcgagcgatttctggcagtgcagcctttaatcgtacagttttagaatctggcctgttttatcctggagacggcgcggttgctagtctaccttgcacaat 31981610  T
Q  203 ttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  31981609 ttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 31981568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 21396956 - 21396707
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  21396956 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 21396857  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  21396856 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagatggcgcggttgctagtctacct 21396757  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  21396756 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 21396707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 6 - 236
Target Start/End: Original strand, 29491074 - 29491316
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggttttt-----------cgaaa-ccatatt 93  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||           ||||| |||||||    
T  29491074 gtgttgacgaaccgttctttttttcctccttctttggtttatcgagtggtctacgtaccatattagagtggttttttcgaaacttttcgaaaaccatatt 29491173  T
Q  94 gaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacc 193  Q
    ||||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29491174 gaggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacc 29491273  T
Q  194 ttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  29491274 ttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcg 29491316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 6 - 241
Target Start/End: Complemental strand, 34376175 - 34375930
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac----------catattga 95  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||||          |||| |||    
T  34376175 gtgttgacgaaccgttcttttcttcctccctctttggtttctcgagtggtctgcgtgccatattagagtggtttttcgaaacttttcgaaaccatactga 34376076  T
Q  96 ggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacctt 195  Q
    ||||||||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||| ||||| ||    
T  34376075 ggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgctaatctacgtt 34375976  T
Q  196 gcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    |||||| |||||||||||||||||||||||||||||||||| ||||    
T  34375975 gcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctg 34375930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 159; E-Value: 9e-85
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 24192318 - 24192567
Alignment:
Q  6 gtgttgacgaaccgttcttttctt-cctccttctttggtttctcgagtggtctacgtaccatattagagtggttttt----------cgaaaccatattg 94  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||          |||||||||| ||    
T  24192318 gtgttgacgaaccgtttttttctttcctccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaaccatactg 24192417  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||| ||||||||| |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24192418 aggtgttattctcgagagatttctggcagtgcagcctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 24192517  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| | |||||||||||||||||||||||||||||||| |||||||    
T  24192518 tgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 24192567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 6 - 233
Target Start/End: Original strand, 22703204 - 22703442
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| | ||||||||||||||||||||||||||||||||| |||||           |||||||    
T  22703204 gtgttgacgaaccgttctttctttcctccttctttggtttattgagtggtctacgtaccatattagagtggttttttgaaacttttcgaaaaccatattg 22703303  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||| ||||||||  |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22703304 aggtgttattctcgagtgatttctgacagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 22703403  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaa 233  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  22703404 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaa 22703442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 244
Target Start/End: Original strand, 24191221 - 24191470
Alignment:
Q  6 gtgttgacgaaccgttcttttctt-cctccttctttggtttctcgagtggtctacgtaccatattagagtggttttt----------cgaaaccatattg 94  Q
    |||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||          |||||||||| ||    
T  24191221 gtgttgacgaaccgtttttttctttcctccctctttggtttctcgagtggtctacgtgccatattagagtggtttttcgaaacttttcgaaaccatactg 24191320  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||| ||||||||| |||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||||||||    
T  24191321 aggtgttattctcgagagatttctggcagtgcagcctttaatcttacagttagaatctgggctgttttatcctggagacggcgcggttactagtctacct 24191420  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| | |||||||||||||||||||||||||||||||| |||||||    
T  24191421 tgcacaactcaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 24191470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 34142335 - 34142088
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcc-tccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaa--------accatattgag 96  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||||        |||||| ||||    
T  34142335 gtgttgacgaaccgttcttttcttccctccttctttggtttctcgagttgtctgcgaaccatattagagtggtttttcgaattttcgaaaccatactgag 34142236  T
Q  97 gtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 196  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34142235 gtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 34142136  T
Q  197 cacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||| || ||||| ||| ||||||||||||||||||||| |||||||    
T  34142135 cacaacttgggtagagccacgaaacgtcttaaagaaagcgacctggtc 34142088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 34154951 - 34154704
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcc-tccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaa--------accatattgag 96  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||| || ||||||||||||||||||||||||        |||||| ||||    
T  34154951 gtgttgacgaaccgttcttttcttccctccttctttggtttctcgagttgtctgcgaaccatattagagtggtttttcgaattttcgaaaccatactgag 34154852  T
Q  97 gtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 196  Q
    |||||||||||||||||||||| | |||||||| ||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34154851 gtgttattctcgagcgatttctagcagtgcagcctttaatcgtacagtttgaatctgggctgttttatcctggagacggcgcggttgctagtctaccttg 34154752  T
Q  197 cacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||| || ||||| ||| ||||||||||||||||||||| |||||||    
T  34154751 cacaacttgggtagagccacgaaacgtcttaaagaaagcgacctggtc 34154704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 21401998 - 21401763
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    ||||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||           |||||||    
T  21401998 gtgttgacgaaccgttctttctttcctccttctttggtttatcgagtggtctacgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 21401899  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||              |||||||||||||||||||||||||||||    
T  21401898 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatc--------------ctggagacggcgcggttgctagtctacct 21401813  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    | ||||| |||||||||||||||||||||||||||||||||| |||||||    
T  21401812 tccacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 21401763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 22698172 - 22698330
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  22698172 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 22698271  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  22698272 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 22698330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 36 - 149
Target Start/End: Original strand, 6728285 - 6728398
Alignment:
Q  36 tctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaaccatattgaggtgttattctcgagcgatttctggtagtgcagcttttaa 135  Q
    |||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||| |||||    
T  6728285 tctttggtttctcgagtggtctacgtgccatattagactggtttttcgaaaccatactgaggtgttattctcgagcgatttctggcagtgcagcctttaa 6728384  T
Q  136 tcgtacagatagaa 149  Q
    |||||||| |||||    
T  6728385 tcgtacagttagaa 6728398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 19478251 - 19478156
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||| ||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  19478251 atctgggctgttttatcgtggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 19478156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 152 - 231
Target Start/End: Original strand, 13605087 - 13605166
Alignment:
Q  152 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaaga 231  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||||||||||||    
T  13605087 tgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaaga 13605166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 10642811 - 10642725
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||| |||||||||| |||| ||||||||||| |||||||||||||||||  | || ||||||| |||||||||||||||||||||    
T  10642811 ctgggatgttttatccgggaggcggcgcggttgttagtctaccttgcacaacctcggatagtgccacgaaacgtcttaaagaaagcg 10642725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 155 - 244
Target Start/End: Original strand, 12182998 - 12183088
Alignment:
Q  155 gctgttttatcctggagacggcgcggttgctagtctaccttgcacaat-ttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||| |||||| || |||||||| |||||||| ||||||||  || |||||||||||||||||||||||||| |||| |||||||    
T  12182998 gctgttttattctggaggcgacgcggttgttagtctacattgcacaaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 12183088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 31495833 - 31495914
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaag 230  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||| ||||| |||||| |||||||||| |||| | ||||||    
T  31495833 atctgggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaag 31495914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 31501219 - 31501300
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaag 230  Q
    ||||||||||||||||||||||||||||| ||||| |||| ||| ||||| |||||| |||||||||| |||| | ||||||    
T  31501219 atctgggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaag 31501300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 232
Target Start/End: Original strand, 17964559 - 17964635
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaa 232  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||||| || ||||||| |||||||||||||||||    
T  17964559 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggatagtgccacgaaacgtcttaaagaa 17964635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 159 - 244
Target Start/End: Complemental strand, 3902006 - 3901920
Alignment:
Q  159 ttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||| ||||||||||| || |||||||||||| || || | ||||||||| |||||||||||||| |||| |||||||    
T  3902006 ttttatcctggaggcggcgcggttggtattctaccttgcacaaacttggatagtgccgcaaaacgtcttaaagagagcgacctggtc 3901920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 244
Target Start/End: Original strand, 5600971 - 5601060
Alignment:
Q  156 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||| ||||| ||||||||||| || |||||||| |||||  | || ||||| ||||||||||||||||||||||| |||||||    
T  5600971 ctgttttatcttggaggcggcgcggttgttattctaccttacacaaactcgggtagtgtcgcgaaacgtcttaaagaaagcgacctggtc 5601060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 31515723 - 31515804
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaag 230  Q
    |||| |||||||||||||||||||||||| ||||| |||| ||| ||||| |||||| |||||||||| |||| | ||||||    
T  31515723 atctaggctgttttatcctggagacggcgtggttgttagtttactttgcataatttaagtagtgccgccaaacatgttaaag 31515804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 11570749 - 11570836
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggt 243  Q
    ||||||||||||||| ||||| ||||| | |||| |||||||||| ||| || |||||| |||||||||||||||| |||| ||||||    
T  11570749 tgttttatcctggaggcggcgtggttgattgtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggt 11570836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 33687603 - 33687690
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggt 243  Q
    ||||||||||||||||||||  ||||| ||||||  |||||||||||| ||  |||||| |||||||||||||||| |||| ||||||    
T  33687603 tgttttatcctggagacggcatggttgatagtctgtcttgcacaattttggccagtgccacgaaacgtcttaaagagagcgacctggt 33687690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 17281558 - 17281643
Alignment:
Q  152 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||||  || ||  ||||||| ||||||||||| ||||| |  || |||||||||||||||||||||||||||||    
T  17281558 tgggctgttttatcctaaaggcgatgcggttgttagtctaccttacacaaatacgggtagtgccgcgaaacgtcttaaagaaagcg 17281643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 149 - 230
Target Start/End: Original strand, 31476007 - 31476088
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaag 230  Q
    ||||| ||||||||||||||||||||||| ||||| ||||  |||||||| || |||  ||||||||| |||| ||||||||    
T  31476007 atctgagctgttttatcctggagacggcgtggttgttagttgaccttgcataacttaaatagtgccgccaaacatcttaaag 31476088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 24589164 - 24589244
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||||||||| ||||| ||||||| |||||||||||| ||  |||| | |||||||| ||||||| ||||    
T  24589164 tgttttatcctggagacggcgtggttgatagtctatcttgcacaattttggaaagtgtcacgaaacgttttaaagagagcg 24589244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 204
Target Start/End: Complemental strand, 12689066 - 12689019
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    ||||||||||||||||||||| ||||| |||||| |||||||||||||    
T  12689066 tgttttatcctggagacggcgtggttgatagtctgccttgcacaattt 12689019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 16836156 - 16836231
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaaga 231  Q
    ||||||||||||||| ||||| ||||| |||||| ||||| |||| ||| || |||||| ||||||||||||||||    
T  16836156 tgttttatcctggaggcggcgtggttgatagtctgccttgtacaattttgggcagtgccacgaaacgtcttaaaga 16836231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 236
Target Start/End: Complemental strand, 21309126 - 21309046
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||| ||||| ||||| |||||| | |||||||| ||| || ||||||  ||||||||||||||| ||||    
T  21309126 tgttttatcctggaggcggcgtggttgatagtctgcattgcacaattttgggcagtgccatgaaacgtcttaaagagagcg 21309046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 204
Target Start/End: Original strand, 11614092 - 11614139
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaattt 204  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||||||    
T  11614092 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattt 11614139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 13736678 - 13736753
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaaga 231  Q
    ||||||||||||||| | | | ||||| |||||| |||||||||| |||||| |||||| ||||||||| ||||||    
T  13736678 tgttttatcctggaggcagtgtggttggtagtcttccttgcacaattttaggcagtgccacgaaacgtcgtaaaga 13736753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 157 - 241
Target Start/End: Original strand, 6407860 - 6407945
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctg 241  Q
    ||||||||||||||| ||||| ||||| |||||| | ||| |||| ||| || |||||| ||||||||||| |||| |||| ||||    
T  6407860 tgttttatcctggaggcggcgtggttgatagtctgctttgtacaattttgggcagtgccacgaaacgtcttcaagagagcgacctg 6407945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 149 - 229
Target Start/End: Complemental strand, 29325639 - 29325558
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcac-aatttaggtagtgccgcgaaacgtcttaaa 229  Q
    ||||||||| ||||||| ||||| || | | |||| ||||||||||||||| || |||||||||| ||  ||||||||||||    
T  29325639 atctgggctattttatcttggaggcgtcacagttgttagtctaccttgcacaaacttaggtagtgtcgtaaaacgtcttaaa 29325558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 236
Target Start/End: Original strand, 2700106 - 2700186
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttag-gtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    ||||||||||||||  ||||| ||||| ||||||  |||||||||||| |   |||||| |||||||||||||||| ||||    
T  2700106 tgttttatcctggaagcggcgtggttgatagtctgtcttgcacaattttgaacagtgccacgaaacgtcttaaagagagcg 2700186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 235
Target Start/End: Original strand, 6112972 - 6113051
Alignment:
Q  156 ctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagc 235  Q
    |||||||||||||||| || | |||||  |||||||||||||||||||| ||||| || || ||  |||||||||||||||    
T  6112972 ctgttttatcctggaggcg-cacggttattagtctaccttgcacaatttcaggtaatgtcgtgattcgtcttaaagaaagc 6113051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 12406353 - 12406441
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||| || || ||||| | ||| |||||| |||||||||| |||||| | |||| ||||||||||| |||| |||| |||||||    
T  12406353 tgttttatcatgaaggcggcgtgattgatagtcttccttgcacaactttaggcactgccacgaaacgtctttaagagagcgacctggtc 12406441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0517 (Bit Score: 168; Significance: 4e-90; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 6 - 244
Target Start/End: Complemental strand, 3820 - 3571
Alignment:
Q  6 gtgttgacgaaccgttcttttcttcctccttctttggtttctcgagtggtctacgtaccatattagagtggtttttcgaaac-----------catattg 94  Q
    |||||||||||||||| |||  |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||           |||||||    
T  3820 gtgttgacgaaccgttttttctttcctccttctttggtttatcgagtggtctatgtaccatattagagtggtttttcgaaacttttcgaaaaccatattg 3721  T
Q  95 aggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgctagtctacct 194  Q
    |||||||||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3720 aggtgttattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggaaacggcgcggttgctagtctacct 3621  T
Q  195 tgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  3620 tgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 3571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 131; Significance: 4e-68; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 31711 - 31553
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  31711 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagttagaatctgggctgttttatcctggagacggcgcggttgct 31612  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||    
T  31611 agtctaccttgcacaacttaggtagtgccgcgaaacgtcttaaagaaagcgacctggtc 31553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 86 - 236
Target Start/End: Complemental strand, 26539 - 26389
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||| ||||||||| |||||||| |||||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  26539 accatatcgaggtgtcattctcgagagatttctggcagtgcagcctttaatcgtacagtaagaatatgggctgttttatcctggagacggcgcggttgct 26440  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  26439 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcg 26389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Complemental strand, 3224 - 3066
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  3224 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 3125  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  3124 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 3066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 123; Significance: 3e-63; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 86 - 244
Target Start/End: Original strand, 81311 - 81469
Alignment:
Q  86 accatattgaggtgttattctcgagcgatttctggtagtgcagcttttaatcgtacagatagaatctgggctgttttatcctggagacggcgcggttgct 185  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  81311 accatatcgaggtgtcattctcgagcgatttctggcagtgcagcctttaatcgtacagtaagaatctgggctgttttatcctggagacggcgcggttgct 81410  T
Q  186 agtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| |||| |||||||    
T  81411 agtctaccttgcacaattcaggtagtgccgcgaaacgtcttaaagagagcgacctggtc 81469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 72; Significance: 7e-33; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 1668 - 1573
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| |||| |||||||    
T  1668 atctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagagcgacctggtc 1573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 7149 - 7054
Alignment:
Q  149 atctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| || |||||||||||||||||||||||||| | || |||||||    
T  7149 atctgagctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgccgcgaaacgtcttaaagagaacgacctggtc 7054  T

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Target: scaffold0132 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 2765 - 2859
Alignment:
Q  150 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||| | ||||||||||||||||  ||| |||||||    
T  2765 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtc 2859  T

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Target: scaffold0132; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 150 - 244
Target Start/End: Original strand, 10725 - 10819
Alignment:
Q  150 tctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||||||||||||||||||| ||||| ||||||||||||||||| || ||||||| | ||||||||||||||||  ||| |||||||    
T  10725 tctgggctgttttatcctggagacggcgtggttgttagtctaccttgcacaacttgggtagtgtcacgaaacgtcttaaagagcgcgacctggtc 10819  T

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Target: scaffold0352 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 7199 - 7111
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  7199 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 7111  T

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Target: scaffold0182 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 9887 - 9975
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| |||||||||||||||| |||| |||||||    
T  9887 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaacgtcttaaagagagcgacctggtc 9975  T

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Target: scaffold0057 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 35729 - 35641
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttagg-tagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| ||||||||||||| ||  |||| | |||||||||||||||| |||||| |||||    
T  35729 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttggccagtgtcacgaaacgtcttaaagagagcggcatggtc 35641  T

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Target: scaffold0002 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 4169 - 4081
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| ||||| |||||| |||||||||| ||| || |||||| ||||| |||||||||| |||| |||||||    
T  4169 tgttttatcctggaggcggcgtggttgatagtctgccttgcacaattttgggcagtgccacgaaatgtcttaaagagagcgacctggtc 4081  T

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Target: scaffold0002; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 224
Target Start/End: Original strand, 443945 - 444011
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaatttaggtagtgccgcgaaacgtc 224  Q
    |||||||||||| |||||||| ||||| |||||| ||||||||||||| || |||||| |||||||||    
T  443945 tgttttatcctg-agacggcgtggttgatagtctgccttgcacaattttggcagtgccacgaaacgtc 444011  T

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Target: scaffold0067 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 33968 - 34056
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaat-ttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    |||||||||||| ||  || ||||||| || ||||||||| ||||  || |||||||||||||||||||||||||| |||| |||||||    
T  33968 tgttttatcctgaaggaggagcggttgttattctaccttgtacaaactttggtagtgccgcgaaacgtcttaaagagagcgacctggtc 34056  T

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Target: scaffold0012 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 243
Target Start/End: Original strand, 166086 - 166173
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggt 243  Q
    ||||||||||||||| ||||| ||||| |||| |  ||||||||| ||| || |||||| |||||||||||||||| |||| ||||||    
T  166086 tgttttatcctggaggcggcgtggttgatagtatgtcttgcacaatttttggcagtgccacgaaacgtcttaaagagagcgacctggt 166173  T

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Target: scaffold0020 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 151 - 244
Target Start/End: Original strand, 1220 - 1313
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||| |  | |||||| ||||||||||||||||||||  |||||||||| ||   ||||||||||||||| |||||||    
T  1220 ctgggctgttttatcttggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgtcttaaagaaagcgacctggtc 1313  T

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Target: scaffold0061 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 243
Target Start/End: Complemental strand, 45885 - 45793
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctggt 243  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||||||  |||||||||| ||   || |||||||||||| ||||||    
T  45885 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgttttaaagaaagcgacctggt 45793  T

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Target: scaffold0017 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 151 - 243
Target Start/End: Original strand, 152902 - 152994
Alignment:
Q  151 ctgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcggcctggt 243  Q
    ||||||||||||||||||||| |  | |||||| ||||||||||||||||||||  |||||||||| ||   || |||||||||||| ||||||    
T  152902 ctgggctgttttatcctggaggca-cacggttgttagtctaccttgcacaatttcgggtagtgccgtgatttgttttaaagaaagcgacctggt 152994  T

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Target: scaffold0045 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 83161 - 83073
Alignment:
Q  157 tgttttatcctggagacggcgcggttgctagtctaccttgcacaa-tttaggtagtgccgcgaaacgtcttaaagaaagcggcctggtc 244  Q
    ||||||||||||||| ||||  ||||| |||||| ||||||| || ||| ||| ||| | |||||||||||||||| |||| |||||||    
T  83161 tgttttatcctggaggcggcatggttgatagtctgccttgcataattttgggtggtgtcacgaaacgtcttaaagagagcgacctggtc 83073  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 171711 - 171794
Alignment:
Q  152 tgggctgttttatcctggagacggcgcggttgctagtctaccttgcacaattt-aggtagtgccgcgaaacgtcttaaagaaagcg 236  Q
    |||||||||||||||| | |||| || ||||| |||||| | ||||||||||| ||| |||||| |||||||||||||||| ||||    
T  171711 tgggctgttttatcctag-gacgtcgtggttgatagtctgc-ttgcacaattttaggcagtgccacgaaacgtcttaaagagagcg 171794  T

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