View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6715_low_4 (Length: 494)
Name: NF6715_low_4
Description: NF6715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6715_low_4 |
 | |
|
| [»] scaffold0182 (3 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 422; Significance: 0; HSPs: 33)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 22 - 483
Target Start/End: Complemental strand, 21628262 - 21627801
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| |
|
|
| T |
21628262 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgacacaaacttgggtgagtaatacttcccaaaatctt |
21628163 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaatagt |
221 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21628162 |
ttttatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcggggtgtttgctttgaattttttaactccacaaatttttctttaatagt |
21628063 |
T |
|
| Q |
222 |
ttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttaccgaaaatgcatatattatataatatggtctcagtgtag |
321 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
21628062 |
ttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttaccgaaaatgcatatattatataatatggtctcagtgtag |
21627963 |
T |
|
| Q |
322 |
tgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttcactttaatcaatttt |
421 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
|
|
| T |
21627962 |
tgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacacttcaactttaatcaatttt |
21627863 |
T |
|
| Q |
422 |
tatacctgtcctcttcactgctaaagtaacttgtcctcagaacaaactatatgatgtccatc |
483 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
21627862 |
tatacctgtcctcttcactgctaaagtaacttgtcctcagaacaaactatataatgtccatc |
21627801 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 22 - 474
Target Start/End: Complemental strand, 21714320 - 21713886
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| ||| ||||||||||||||| | |||||||||| | || |||||||||||||||||| ||| || |||||||||||||||| ||||||||||| | |
|
|
| T |
21714320 |
cacataagtttgtacttctctcctttcttcagatttggattgtcatgatggataggacctaatgacacaaacttgggtgagtaatgcttctcaaaatttg |
21714221 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaatagt |
221 |
Q |
| |
|
|||||||||||| | | || |||||||||||||||| ||||||| |||| |||||||||| |||| |||| || |||| ||||||||||||||||||| |
|
|
| T |
21714220 |
ttctatttctgaaacggtcaaccaccctttgtatcttcggtcgtgaattttggggtgtttgcattgatttttgtagctccacaaatttttctttaatagt |
21714121 |
T |
|
| Q |
222 |
ttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttaccgaaaatgcatatattatataatatggtctcagtgtag |
321 |
Q |
| |
|
||||||||||||| ||| |||||||||||| |||||| |||||||||||||||| ||| || || ||| || ||||||||| |
|
|
| T |
21714120 |
ttgggatgccatccttcattcaatataata---tttgagggatattgatctttcaaaattaacg----------------attataagggatcagtgtag |
21714040 |
T |
|
| Q |
322 |
tgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaa-aatcttacaccttcactttaatcaattt |
420 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||| ||||||||| ||||| ||||||| || |||||| | | |||||||| ||||| |
|
|
| T |
21714039 |
tgctttaaattttcatgctctcaaacctttacctaatgaacaagttaagtaaatctgctttcttaaaaaaactatcttaaatttcgactttaataaattt |
21713940 |
T |
|
| Q |
421 |
ttatacctgtcctcttcactgctaaagtaacttgtcctcagaacaaactatatg |
474 |
Q |
| |
|
|||||| |||||||||||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
21713939 |
ttatacttgtcctcttcactgctaaagtaacttgtcctcggaacgaactatatg |
21713886 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 22 - 424
Target Start/End: Complemental strand, 21664235 - 21663837
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| ||||||||||||| |||||| ||||||| |||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||| | || |
|
|
| T |
21664235 |
cacataagcttgtacttccctcctaacttcagatctgtattgccatgatggataggacctattgacaggaacttgggtgagtaatacttctcaaagtttt |
21664136 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaa---t |
218 |
Q |
| |
|
|||| |||||||||| | | ||||||||||||||||||||||| | || |||| ||||||||||||||| || |||| ||| ||||| || || | |
|
|
| T |
21664135 |
ttctgtttctgagattgtgtggcaccctttgtatctttggtcgtgaactttggggtatttgctttgaattttctagctccacaatttttttttcaagggt |
21664036 |
T |
|
| Q |
219 |
agtttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttaccgaaaatgcatatattatataatatggtctcagtg |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| | ||| |||| | | || |||||||||||||||| |||| || |
|
|
| T |
21664035 |
agtttgggatgccatcattctttcaatataataatggttgaggaatttaaatc---aaaacgtgtattatat---aatattatataatatgggctcactg |
21663942 |
T |
|
| Q |
319 |
tagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttcactttaatcaat |
418 |
Q |
| |
|
|| |||||| |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |
|
|
| T |
21663941 |
tactgctttggattttttttctctcaaacctttacctaatgaacaagataagtaaatatgcttgcttaaaa-aaaatcttacaccttcactttaatctag |
21663843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 22 - 387
Target Start/End: Complemental strand, 21704780 - 21704423
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| |||||||||||||||||||| |||||| ||| | || ||||||||||||||||||| || || |||||||||||||||| || |||||| | || |
|
|
| T |
21704780 |
cacataagcttgtacttctctcctaacttcagagttggattgtcatgatggataggacctatcgacactaacttgggtgagtaatgctgctcaaagtttt |
21704681 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaatagt |
221 |
Q |
| |
|
||||| ||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
21704680 |
ttctacttctgagatactcttgcaccctttgtatctttggtcgtgcatttggaggtgtttgctttgaattttttaactcgacaaatttttctttaatagt |
21704581 |
T |
|
| Q |
222 |
ttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttaccgaaaatgcata-tattatataatatggtctcagtgta |
320 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||||||||| ||| || | | || ||| ||||||||||||||| ||||| ||| |
|
|
| T |
21704580 |
ttgggatgccatcattcattcaatataataatggttgaggaatataaatc-----aaaatgcgttttat--atagtattatataatatgggctcagcgta |
21704488 |
T |
|
| Q |
321 |
gtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaa |
387 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
21704487 |
gtgctttagtttttcat--tctcaaacctttacctaatgaacaagataactaaatatgcttgcttaa |
21704423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 22 - 438
Target Start/End: Complemental strand, 21788366 - 21787951
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| |||||||||||||||||||| |||| |||||| || |||||||||||||||||| || | |||||||| ||||||| ||||||||| | || |
|
|
| T |
21788366 |
cacataagcttgtacttctctcctaacttcaaatttgtgttgtcatgatggataggacctaccgacaacaacttgggcgagtaatgcttctcaaagtttt |
21788267 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaatagt |
221 |
Q |
| |
|
||||||||||||||| || |||||||||||||| || ||||||| |||| ||||||||||||||| |||| ||||||| |||||||||| |||||||| |
|
|
| T |
21788266 |
ttctatttctgagatactctgccaccctttgtattttcggtcgtgaattttggggtgtttgctttgatttttgtaactccacaaatttttcattaatagt |
21788167 |
T |
|
| Q |
222 |
ttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttaccgaaaatgca----------tatattatataatatggt |
311 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||||||||||| |||||||| | | ||||||||||||||| |
|
|
| T |
21788166 |
ttgggatgccatcat---------------atggttgagagatattgatctttcaaacttaacgaaaatgtaaatcaaaatgtgtattatataatatggg |
21788082 |
T |
|
| Q |
312 |
c------tcagtgtagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacacctt |
405 |
Q |
| |
|
| ||| | ||||||||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| | |||||||||| | |
|
|
| T |
21788081 |
ctcaaattcaatatagtgctttagtttttcatgctctcaaacctttacctaatgaacaagataactaaatatgcttgcttaaa--ataatcttacacttc |
21787984 |
T |
|
| Q |
406 |
cactttaatcaatttttatacctgtcctcttca |
438 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |
|
|
| T |
21787983 |
aactttaatcgatttttatacctgtcctcttca |
21787951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 22 - 435
Target Start/End: Complemental strand, 21652206 - 21651814
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| |||||| |||| ||||||| |||| ||||||| || ||||||||||||||||||||||||| |||||||| | ||||| |||||||||| | |
|
|
| T |
21652206 |
cacataagcttatactcctctcctggtttcatatttgtattgtcatgatggataggacctattgaaacaaacttgggggtgtaatgtttctcaaaattgt |
21652107 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaatagt |
221 |
Q |
| |
|
||||||||||||||| | | ||||||||||||||||||||||| |||| ||||||||||||||| |||| || ||| ||||||||||||||||||| |
|
|
| T |
21652106 |
ttctatttctgagatactgtggcaccctttgtatctttggtcgtgaattttggggtgtttgctttgatttttgtagttccacaaatttttctttaatagt |
21652007 |
T |
|
| Q |
222 |
ttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttaccgaaaatgcatatattatataatatggtctcagtgtag |
321 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| | |||||| ||| |||| || | ||||||||||| | |||||||||| |
|
|
| T |
21652006 |
ttgggatgccatcattcaatcaatataataatggttaatgaatataaatc--------------aaaacgc--cttttatataatattggctcagtgtag |
21651923 |
T |
|
| Q |
322 |
tgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttcactttaatcaatttt |
421 |
Q |
| |
|
|||| ||||||| ||||||| |||||||||||||||| | |||||||||||||||||||||||| ||||| |||||| | |||||||||| ||||| |
|
|
| T |
21651922 |
tgctctagatttccatgctcacaaacctttacctaattaacaagataagtaaatatgcttgctt-----aaaatattacacttccactttaatcgatttt |
21651828 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 22 - 479
Target Start/End: Complemental strand, 21681787 - 21681305
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| |||||||||||||||||||| || |||| |||| ||||||||||||||||||||||||| || |||||||| ||||| || || ||| | | |
|
|
| T |
21681787 |
cacataagcttgtacttctctcctaactttagatctgtattgccatgatggataggacctattgacacaaacttggggctgtaatgctccttaaattttg |
21681688 |
T |
|
| Q |
122 |
ttctatttctgagatgatcg-gccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaat---------tttttaactccgcaaattttt |
211 |
Q |
| |
|
|||||||| ||| || | || | ||||||||||||||||||||||| |||| ||||||||| |||| || ||| || |||| ||| |||| |
|
|
| T |
21681687 |
ttctatttttgacat-accgtggcaccctttgtatctttggtcgtgaattttggggtgtttgatttgtatctatgtatatttgtagctccacaatatttt |
21681589 |
T |
|
| Q |
212 |
ctttaa---tagtttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttaccgaaaatgcatata----------- |
297 |
Q |
| |
|
||| || |||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||| | | || |
|
|
| T |
21681588 |
cttcaagggtagtttgggatgacatcattcattcaatgtaataatggttgaggaatattgatctttcaaacttaacgaaattataaatcaaaatgtctag |
21681489 |
T |
|
| Q |
298 |
ttatataat-atggtctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgctt-aaaacaaaat |
395 |
Q |
| |
|
||||||| | |||| ||||| |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||| |||| ||||| |
|
|
| T |
21681488 |
ttatatattgatgggctcagggtagtgctttagtttttcatgctctcaaacctttacctaataaacaagataagtaaatatgcttgcttaaaaaaaaaat |
21681389 |
T |
|
| Q |
396 |
cttacaccttcactttaat-caatttttatacctgtcctcttcactgctaaagtaacttgtcctcagaacaaactatatgatgtc |
479 |
Q |
| |
|
|| ||| |||||||||||| | ||||||||||||||||||| || |||||| ||||||||||||||||||||||||| ||||| |
|
|
| T |
21681388 |
ctcaca-cttcactttaatagattttttatacctgtcctctttgctactaaagcaacttgtcctcagaacaaactatataatgtc |
21681305 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 22 - 278
Target Start/End: Original strand, 21808176 - 21808435
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| |||||||||||||||||||| ||||||||| || | ||||||||||||||||||||||| || |||||||||||||||| |||||||| || | |
|
|
| T |
21808176 |
cacataagcttgtacttctctcctaacttcagatttatatttccatgatggataggacctattgataccaacttgggtgagtaatgcttctcaagatttg |
21808275 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaa---t |
218 |
Q |
| |
|
||||||||||||||| || ||||||||||||||||||||||||| |||| |||| |||| ||||||||||||| |||| ||| |||| || || | |
|
|
| T |
21808276 |
ttctatttctgagatactcagccaccctttgtatctttggtcgtgaattttggggtatttgatttgaattttttagctccacaatctttttttcaagggt |
21808375 |
T |
|
| Q |
219 |
agtttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaa |
278 |
Q |
| |
|
|||||||||| ||||||||| |||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
21808376 |
agtttgggattccatcattcattcaatataataatggctgaggaatattgatcttgcaaa |
21808435 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 22 - 415
Target Start/End: Complemental strand, 21785543 - 21785134
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| ||||||||||||||||||| | |||||||||| | || |||||||||||||||||||||| || |||||||||||||||| ||||||||| | || |
|
|
| T |
21785543 |
cacataagcttgtacttctctcctgtcttcagatttggattgtcatgatggataggacctattgacactaacttgggtgagtaatgcttctcaaagtttt |
21785444 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaa---t |
218 |
Q |
| |
|
| |||||||| |||| || ||||||||||||||||||||||| |||| |||| ||||||||||||||| || |||| ||| ||||| || || | |
|
|
| T |
21785443 |
tcctatttcttagatactcttgcaccctttgtatctttggtcgtgaattttggggtatttgctttgaattttctagctccacaatttttttttcaagggt |
21785344 |
T |
|
| Q |
219 |
agtttgggatgccatcattctttcaatataataatggttgaggaatattgatc--tttcaaacttaccgaaaatgcatat----------attatata-a |
305 |
Q |
| |
|
||||||||||| ||||||| |||||||| ||||||||| ||| ||||||||| |||||||||| |||||| || || |||||||| | |
|
|
| T |
21785343 |
agtttgggatgtcatcattgattcaatatgataatggttaagggatattgatctttttcaaacttgatgaaaatacaaatcaaaatgcggattatatata |
21785244 |
T |
|
| Q |
306 |
tatggtctcagtgtagtgctttagattttcat-gctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacacct |
404 |
Q |
| |
|
| || |||||||| | || ||| |||||||| | ||| || ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
21785243 |
gaggggctcagtgttgcgcattaaattttcatggatcttgaaactttacctaatgaacaagataagtaaatatgcttgcttaaaa-aaaatcttacacct |
21785145 |
T |
|
| Q |
405 |
tcactttaatc |
415 |
Q |
| |
|
|||||||||| |
|
|
| T |
21785144 |
ccactttaatc |
21785134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 22 - 470
Target Start/End: Complemental strand, 21792148 - 21791710
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| |||||||||||||||||||| | ||||| |||||||||||||||||| ||||||||||| || ||| | || ||||| ||||||||||| || |
|
|
| T |
21792148 |
cacataagcttgtacttctctcctaactccagatctgtactgccatgatggatgggacctattgatacaaaccttgggatgtaatgcttctcaaaatttt |
21792049 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaat---------tttttaactccgcaaatttttc |
212 |
Q |
| |
|
||| |||||||||| || ||||||||||||||||||||| || | || ||||||| | |||| || ||| || |||| ||| |||| |
|
|
| T |
21792048 |
ctctctttctgagatactctgccaccctttgtatctttggttttgaacttgggggtgttggatttgtatctatgtacctttgtagctccacaacttttct |
21791949 |
T |
|
| Q |
213 |
tttaa---tagtttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttaccgaaaatgcatatattatataatatg |
309 |
Q |
| |
|
|| || ||| ||||||||||||||||| |||||||||||||||||||| | ||| ||||| ||||||||||| |||||||||| |
|
|
| T |
21791948 |
ttcaagggtaggttgggatgccatcattcattcaatataataatggttga---------aactt------ttacc--taatgcatatataatataatatg |
21791866 |
T |
|
| Q |
310 |
gtctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttcact |
409 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||||||||||||||| ||| |||||||||||||||||||||||| ||||| |||||| | |||| |
|
|
| T |
21791865 |
ggctcagtgtagtgctttagattttcatgctttcaaacctttacctactgaacaagataagtaaatatgcttgctt-----aaaatattacacttccact |
21791771 |
T |
|
| Q |
410 |
ttaatcaatttttatacctgtcctcttcactgctaaagtaacttgtcctcagaacaaacta |
470 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |
|
|
| T |
21791770 |
ttaattgatttttatacctgtcctcttcactgctaaagtaacttgttctcggaacgaacta |
21791710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 319 - 450
Target Start/End: Complemental strand, 21791578 - 21791447
Alignment:
| Q |
319 |
tagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttcactttaatcaat |
418 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |
|
|
| T |
21791578 |
tagtgctttagattttcatgctctcaaacctttacctaatgaacaagataagtaaatatgcttgcttaaaacaaaatcttacacttcaactttaatcaat |
21791479 |
T |
|
| Q |
419 |
ttttatacctgtcctcttcactgctaaagtaa |
450 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
21791478 |
ttttatacctgtcctcttcactgctaaagtaa |
21791447 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 288 - 470
Target Start/End: Complemental strand, 21689277 - 21689100
Alignment:
| Q |
288 |
aatgcatatattatataatatggtctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaa |
387 |
Q |
| |
|
||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
21689277 |
aatgcatatataatataatatgggctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgaacaagataagtaaatatgcttgcttaa |
21689178 |
T |
|
| Q |
388 |
aacaaaatcttacaccttcactttaatcaatttttatacctgtcctcttcactgctaaagtaacttgtcctcagaacaaacta |
470 |
Q |
| |
|
|| | |||||| | |||||||| ||||||||||||||||||||||||||||||||||||||| ||| |||| ||||| |
|
|
| T |
21689177 |
aata-----ttacacttccactttaaatgatttttatacctgtcctcttcactgctaaagtaacttgttctcggaacgaacta |
21689100 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 56 - 266
Target Start/End: Complemental strand, 21992276 - 21992063
Alignment:
| Q |
56 |
ttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatcttttctatttctgagatgatcggccaccctttgtat |
155 |
Q |
| |
|
||||| ||||||||||||||||||||||||| || || ||||||||||| | ||||||||| |||||||||||| |||||| || |||||||||||||| |
|
|
| T |
21992276 |
ttgtattgccatgatggataggacctattgacaccaatttgggtgagtagtgcttctcaaagtcttttctatttttgagatactctgccaccctttgtat |
21992177 |
T |
|
| Q |
156 |
ctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaa---tagtttgggatgccatcattctttcaatataataa |
252 |
Q |
| |
|
|| || ||||| |||| |||| ||||||||||||||| || |||| ||| |||||||| || |||||||||||||||||||| ||||||||||||| |
|
|
| T |
21992176 |
ctgtgttcgtgaattttggggtatttgctttgaattttctagctccacaattttttcttcaagggaagtttgggatgccatcattcattcaatataataa |
21992077 |
T |
|
| Q |
253 |
tggttgaggaatat |
266 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
21992076 |
tggttgaggaatat |
21992063 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 66 - 281
Target Start/End: Complemental strand, 21772054 - 21771839
Alignment:
| Q |
66 |
atgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatcttttctatttctgagatgatcggccaccctttgtatctttggtcgt |
165 |
Q |
| |
|
|||||| |||||||||||||| || ||||||||||||||| ||||||||| | |||||||||||||||| | ||||||||||||||| |||| | |
|
|
| T |
21772054 |
atgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagagactttagcaccctttgtatcttcggtctt |
21771955 |
T |
|
| Q |
166 |
gcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaatagtttgggatgccatcattctttcaatataataatggttgaggaata |
265 |
Q |
| |
|
| |||| |||| |||||||||| |||| || ||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| ||| |
|
|
| T |
21771954 |
gaattttggggtatttgctttgatttttgtagttccacaaatttttctttaatagtttcggatgccatcattcattcaatatgataatggttgagggata |
21771855 |
T |
|
| Q |
266 |
ttgatctttcaaactt |
281 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
21771854 |
ttgatctttcaaactt |
21771839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 66 - 281
Target Start/End: Complemental strand, 21725989 - 21725774
Alignment:
| Q |
66 |
atgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatcttttctatttctgagatgatcggccaccctttgtatctttggtcgt |
165 |
Q |
| |
|
|||||| |||||||||||||| || ||||||||||||||| ||||||||| | |||||||||||||||| | ||||||||||||||| |||| | |
|
|
| T |
21725989 |
atgatgaataggacctattgacacacacttgggtgagtaatgcttctcaaagttttttctatttctgagagactttagcaccctttgtatcttcggtctt |
21725890 |
T |
|
| Q |
166 |
gcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaatagtttgggatgccatcattctttcaatataataatggttgaggaata |
265 |
Q |
| |
|
| |||| || | |||||||||| |||| || ||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| | | |
|
|
| T |
21725889 |
gaattttgggatatttgctttgatttttgtagttccacaaatttttctttaatagtttcggatgccatcattcattcaatatgataatggttgagggaaa |
21725790 |
T |
|
| Q |
266 |
ttgatctttcaaactt |
281 |
Q |
| |
|
||||||| |||||||| |
|
|
| T |
21725789 |
ttgatctgtcaaactt |
21725774 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 299 - 453
Target Start/End: Complemental strand, 21991610 - 21991458
Alignment:
| Q |
299 |
tatataatatggtctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatctt |
398 |
Q |
| |
|
||||| |||||| ||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||| ||||| || |
|
|
| T |
21991610 |
tatattatatgggttcagtgtagtgctttagattttcattctctcgaacctttacctaatgaacaagataagtaaatatgcttgcttaaa--aaaatgtt |
21991513 |
T |
|
| Q |
399 |
acaccttcactttaat-caatttttatacctgtcctcttcactgctaaagtaactt |
453 |
Q |
| |
|
||| |||||||||||| | ||||||||| ||||||||| ||| |||||||||||| |
|
|
| T |
21991512 |
aca-cttcactttaatagattttttatacttgtcctctttactactaaagtaactt |
21991458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 27 - 283
Target Start/End: Complemental strand, 21764194 - 21763941
Alignment:
| Q |
27 |
aagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatcttttcta |
126 |
Q |
| |
|
|||||||||||||||||||| ||||||| || ||| |||||||||||||||||||||| | |||||||||| ||| | |||| | |||| | | |
|
|
| T |
21764194 |
aagcttgtacttctctcctaacttcagatctgatctgtcatgatggataggacctattgacaacaacttgggtgtgtagtgcttccccaaatttgacatc |
21764095 |
T |
|
| Q |
127 |
tttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaatagtttggg |
226 |
Q |
| |
|
||||| | | || | ||||||||||||||| ||||||| |||| ||||||||||||||| || || |||| ||||||||||||||| |||||||| |
|
|
| T |
21764094 |
cttctgcggtaatatggcaccctttgtatcttgggtcgtgaattttggggtgtttgctttga---ttgtagctccacaaatttttctttaagagtttggg |
21763998 |
T |
|
| Q |
227 |
atgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttac |
283 |
Q |
| |
|
|||||||||||| ||||||| | |||||||||||| ||||||||||| |||| |||| |
|
|
| T |
21763997 |
atgccatcattcattcaatacactaatggttgagggatattgatcttgcaaagttac |
21763941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 178 - 290
Target Start/End: Complemental strand, 21741087 - 21740975
Alignment:
| Q |
178 |
gtttgctttgaattttttaactccgcaaatttttctttaatagtttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaa |
277 |
Q |
| |
|
||||||||| | |||| || |||| ||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
21741087 |
gtttgctttaatttttgtagctccacaattttttctttaatagtttgggatgccatcattcattcaatataataatggttgaggaatattgatccttcaa |
21740988 |
T |
|
| Q |
278 |
acttaccgaaaat |
290 |
Q |
| |
|
||||| ||||||| |
|
|
| T |
21740987 |
acttaacgaaaat |
21740975 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 21646880 - 21646720
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| ||||||||| ||||||||||| ||||| |||| | || |||||||||||||||||||||| || |||||||| | ||||| || |||||| | | |
|
|
| T |
21646880 |
cacataagcttgtatttctctcctatcttcagctttggattgtcatgatggataggacctattgacaccaacttgggggtgtaatgctcctcaaattttg |
21646781 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttg |
182 |
Q |
| |
|
||||||||||||||| | | ||||||||||||||||||||||| |||| ||||||||| |
|
|
| T |
21646780 |
ttctatttctgagatactgtggcaccctttgtatctttggtcgtgaattttggggtgtttg |
21646720 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 312 - 467
Target Start/End: Complemental strand, 21622891 - 21622745
Alignment:
| Q |
312 |
ctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttcacttt |
411 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||| ||||||| ||| ||||||||| |
|
|
| T |
21622891 |
ctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgaacaagataagtaa--------cctttaaa-aaaatctcaca-cttcacttt |
21622802 |
T |
|
| Q |
412 |
aat-caatttttatacctgtcctcttcactgctaaagtaacttgtcctcagaacaaa |
467 |
Q |
| |
|
||| | ||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
21622801 |
aatagattttttatacctgtcctcttttttactaaagtaacttgtcctcagaacaaa |
21622745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 22 - 278
Target Start/End: Complemental strand, 15713760 - 15713492
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| ||||||||||||||| ||| || ||||||||| || ||||||||||||| ||||||||||| ||||| |||| ||||| | ||||| ||| || |
|
|
| T |
15713760 |
cacataagcttgtacttctcccctgactttagatttgtattgtcatgatggatagggcctattgaaaccaacttaggtgcgtaatgcatctcataatttt |
15713661 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttg---------aattttttaactccgcaaatttttc |
212 |
Q |
| |
|
| || |||||||||| | | ||||||||||||||||||||||| | || |||||||||||||| || ||| || |||| ||| ||||| |
|
|
| T |
15713660 |
tactttttctgagatagcctggcaccctttgtatctttggtcgtgaactttggggtgtttgctttgtatttatgtaactttgtagctccacaattttttt |
15713561 |
T |
|
| Q |
213 |
tttaa---tagtttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaa |
278 |
Q |
| |
|
|| || ||||||| ||||||||||||| |||| |||||| |||||||||| ||||||||||| |||| |
|
|
| T |
15713560 |
ttcaagggtagtttgcgatgccatcattcattcattataatcatggttgagggatattgatcttgcaaa |
15713492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 21623330 - 21623246
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaat |
106 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| || |||||||||||||||| |
|
|
| T |
21623330 |
cacataagcttgtacttctctcctaacttcagatttgtattgccatgatggataggacctattgacaccaacttgggtgagtaat |
21623246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 307 - 414
Target Start/End: Complemental strand, 21639546 - 21639441
Alignment:
| Q |
307 |
atggtctcagtgtagtgctttagattttcatgctctcaaacctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttc |
406 |
Q |
| |
|
|||| ||||||||||||||||| ||||||||||||| || ||||||||||||| |||||||||||||||||||||||||||| |||||||||| | || |
|
|
| T |
21639546 |
atgggctcagtgtagtgctttaaattttcatgctcttgaaactttacctaatgaacaagataagtaaatatgcttgcttaaaa-taaatcttacagc-tc |
21639449 |
T |
|
| Q |
407 |
actttaat |
414 |
Q |
| |
|
|||||||| |
|
|
| T |
21639448 |
actttaat |
21639441 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 22 - 159
Target Start/End: Complemental strand, 21745669 - 21745532
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| |||||| |||| |||||| | || ||||||| | || |||||||||||||||||| ||| || |||||||||||||||| ||||||||||| | |
|
|
| T |
21745669 |
cacataagcttatactcttctcctgtctttagatttggattgtcatgatggataggacctaatgacaccaacttgggtgagtaatgcttctcaaaatttg |
21745570 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatcttt |
159 |
Q |
| |
|
|||||||| ||||||| || ||||||||||||||||| |
|
|
| T |
21745569 |
ttctatttatgagatggtctaccaccctttgtatcttt |
21745532 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 21771796 - 21771721
Alignment:
| Q |
348 |
ctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttcactttaatcaatttttat |
424 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||| ||| | ||||||||||||||||||| | |||||| |
|
|
| T |
21771796 |
ctttacctaatgaacaagataagtaaatatgcttgcttaaaa-aaattattacaccttcactttaatcgagttttat |
21771721 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 21725731 - 21725657
Alignment:
| Q |
348 |
ctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttcactttaatcaatttttat |
424 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||||| | |||||| |
|
|
| T |
21725731 |
ctttacctaatgaacaagataagtaaatatgcgtgcttaaa--aaaatattacaccttcactttaatctagttttat |
21725657 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 22 - 166
Target Start/End: Complemental strand, 21689550 - 21689406
Alignment:
| Q |
22 |
cacacaagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatctt |
121 |
Q |
| |
|
|||| |||||||||||||||||||| || ||| | || |||||||||||||||||||| |||| | ||| | || | |||| ||||||||| | || |
|
|
| T |
21689550 |
cacataagcttgtacttctctcctaactttagagatttattgccatgatggataggaccttttgacatcaacctcggggtctaatgcttctcaaattttt |
21689451 |
T |
|
| Q |
122 |
ttctatttctgagatgatcggccaccctttgtatctttggtcgtg |
166 |
Q |
| |
|
|||||||||||||| || ||||||||||||||||||||||| |
|
|
| T |
21689450 |
ctctatttctgagatactcttgcaccctttgtatctttggtcgtg |
21689406 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 290
Target Start/End: Complemental strand, 21622968 - 21622897
Alignment:
| Q |
218 |
tagtttgggatgccatcattctttcaatataataatggttgagg--aatattgatctttcaaacttaccgaaaat |
290 |
Q |
| |
|
||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||| ||||||| |
|
|
| T |
21622968 |
tagtttgggatgccatcattcattcaata---taatggttgagggatatattgatctttcaaacttaacgaaaat |
21622897 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 418 - 483
Target Start/End: Complemental strand, 21704417 - 21704353
Alignment:
| Q |
418 |
tttttatacctgtcctcttcactgctaaagtaacttgtcctcagaacaaactatatgatgtccatc |
483 |
Q |
| |
|
||||||||||||||||||| | |||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
21704417 |
tttttatacctgtcctctttgttactaaagtaacttgtcctcagaacaaa-tatataatgtccatc |
21704353 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 21689326 - 21689289
Alignment:
| Q |
222 |
ttgggatgccatcattctttcaatataataatggttga |
259 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21689326 |
ttgggatgccatcattcattcaatataataatggttga |
21689289 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 442 - 483
Target Start/End: Complemental strand, 21740767 - 21740726
Alignment:
| Q |
442 |
ctaaagtaacttgtcctcagaacaaactatatgatgtccatc |
483 |
Q |
| |
|
||||||||||||||||||| |||||||||||| ||||||||| |
|
|
| T |
21740767 |
ctaaagtaacttgtcctcataacaaactatataatgtccatc |
21740726 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 21740931 - 21740856
Alignment:
| Q |
348 |
ctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttcactttaatcaatttttata |
425 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||| ||||| ||| ||||||| |||||||||||| | |||||||| |
|
|
| T |
21740931 |
ctttacctattgaagaagataagtaaatatgcttgc-taaaaaaaattcttaca-cttcactttaataattttttata |
21740856 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 250 - 289
Target Start/End: Complemental strand, 21639614 - 21639575
Alignment:
| Q |
250 |
taatggttgaggaatattgatctttcaaacttaccgaaaa |
289 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||| |
|
|
| T |
21639614 |
taatggttgagggatattgatctttcaaacttaacgaaaa |
21639575 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182 (Bit Score: 93; Significance: 4e-45; HSPs: 3)
Name: scaffold0182
Description:
Target: scaffold0182; HSP #1
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 27 - 283
Target Start/End: Complemental strand, 25442 - 25186
Alignment:
| Q |
27 |
aagcttgtacttctctcctatgttcagatttgtactgccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatcttttcta |
126 |
Q |
| |
|
|||||||||||||||||||| ||||||||| || || |||||||||||||||||||||| || ||||||||| ||| |||||| |||| | | | |
|
|
| T |
25442 |
aagcttgtacttctctcctaacttcagatttttattgtcatgatggataggacctattgacaccaacttgggtttgtagtacttcctcaaatttggtatc |
25343 |
T |
|
| Q |
127 |
tttctgagatgatcggccaccctttgtatctttggtcgtgcatttcagggtgtttgctttgaattttttaactccgcaaatttttctttaatagtttggg |
226 |
Q |
| |
|
|||||| | | || ||||||||||||||||| ||| ||| |||| ||||||||||||||| |||| || |||| ||| ||||||||||| |||||||| |
|
|
| T |
25342 |
tttctgcggtaatatgccaccctttgtatcttgggtggtgaattttggggtgtttgctttgatttttgtagctcctcaattttttctttaagagtttggg |
25243 |
T |
|
| Q |
227 |
atgccatcattctttcaatataataatggttgaggaatattgatctttcaaacttac |
283 |
Q |
| |
|
||||||||||| ||||||| | |||||||||||| ||||||||||| |||| |||| |
|
|
| T |
25242 |
ctgccatcattcattcaatacactaatggttgagggatattgatcttgcaaagttac |
25186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 179 - 281
Target Start/End: Complemental strand, 34514 - 34412
Alignment:
| Q |
179 |
tttgctttgaattttttaactccgcaaatttttctttaatagtttgggatgccatcattctttcaatataataatggttgaggaatattgatctttcaaa |
278 |
Q |
| |
|
|||||||||| |||| || ||| ||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||||| | |||||||| ||||| |
|
|
| T |
34514 |
tttgctttgatttttgtagttccacaaatttttctttaatagtttcggatgccatcattcattcaatatgataatggttgagggaaattgatctgtcaaa |
34415 |
T |
|
| Q |
279 |
ctt |
281 |
Q |
| |
|
||| |
|
|
| T |
34414 |
ctt |
34412 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0182; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 348 - 424
Target Start/End: Complemental strand, 34369 - 34295
Alignment:
| Q |
348 |
ctttacctaatgagcaagataagtaaatatgcttgcttaaaacaaaatcttacaccttcactttaatcaatttttat |
424 |
Q |
| |
|
||||||||||||| |||||||||||||||||| |||||||| ||||| ||||||||||||||||||| | |||||| |
|
|
| T |
34369 |
ctttacctaatgaacaagataagtaaatatgcgtgcttaaa--aaaatattacaccttcactttaatctagttttat |
34295 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 64 - 130
Target Start/End: Original strand, 18192286 - 18192352
Alignment:
| Q |
64 |
ccatgatggataggacctattgaaacgaacttgggtgagtaatacttctcaaaatcttttctatttc |
130 |
Q |
| |
|
||||||||||||||||| ||||| || || ||||| ||||||| ||||||||||||||||| ||||| |
|
|
| T |
18192286 |
ccatgatggataggacccattgataccaatttgggcgagtaatgcttctcaaaatcttttcgatttc |
18192352 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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