View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6718_high_11 (Length: 248)
Name: NF6718_high_11
Description: NF6718
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6718_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 163; Significance: 4e-87; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 9 - 214
Target Start/End: Original strand, 28237954 - 28238160
Alignment:
| Q |
9 |
tggtgttaagagcactctatatgatactaagacctctatagtacggtactatggcactatgatctggtactatgactactttaatatgatatcatgacca |
108 |
Q |
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| T |
28237954 |
tggtgttaagagcactctatatgatactaagacctctatagtacggtactatgacactaagatctggtactacgactactttaatatgatatcatgacca |
28238053 |
T |
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| Q |
109 |
ctccttaactaaagggacaatgatactataaccac-ttaaatttgtaccaggaccactcataattgaaagtacaatggtactataaccactctaaattgg |
207 |
Q |
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|||||||||||||||||||||||| |||||||||| ||||||||||||||| || |||||||||||| |||||||||||||||||||||| |||||||| |
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| T |
28238054 |
ctccttaactaaagggacaatgatcctataaccactttaaatttgtaccagaacttctcataattgaaggtacaatggtactataaccactttaaattgg |
28238153 |
T |
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| Q |
208 |
tactata |
214 |
Q |
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||||||| |
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| T |
28238154 |
tactata |
28238160 |
T |
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