View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6719_low_18 (Length: 216)

Name: NF6719_low_18
Description: NF6719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6719_low_18
NF6719_low_18
[»] scaffold0200 (1 HSPs)
scaffold0200 (28-184)||(19368-19524)
[»] chr4 (42 HSPs)
chr4 (29-181)||(25753160-25753312)
chr4 (28-184)||(53823361-53823517)
chr4 (29-184)||(2061679-2061834)
chr4 (75-181)||(22811147-22811253)
chr4 (33-184)||(39420958-39421109)
chr4 (29-158)||(38637174-38637302)
chr4 (29-158)||(41117908-41118037)
chr4 (29-182)||(48098320-48098473)
chr4 (72-179)||(49747517-49747624)
chr4 (68-184)||(46698764-46698881)
chr4 (69-184)||(38929812-38929927)
chr4 (99-184)||(19815235-19815320)
chr4 (84-184)||(12296160-12296260)
chr4 (85-184)||(31050659-31050758)
chr4 (86-184)||(8255012-8255110)
chr4 (86-184)||(8268430-8268528)
chr4 (84-182)||(16501718-16501816)
chr4 (84-182)||(35800476-35800574)
chr4 (26-184)||(19673086-19673243)
chr4 (86-182)||(4305712-4305808)
chr4 (79-173)||(6599936-6600030)
chr4 (72-145)||(16833005-16833078)
chr4 (85-166)||(28966870-28966951)
chr4 (96-184)||(19311351-19311437)
chr4 (85-184)||(2825768-2825867)
chr4 (111-178)||(21387227-21387294)
chr4 (90-184)||(30964426-30964520)
chr4 (114-158)||(39041300-39041344)
chr4 (29-96)||(49528145-49528212)
chr4 (88-174)||(24740103-24740189)
chr4 (120-158)||(40813813-40813851)
chr4 (100-152)||(30167576-30167628)
chr4 (94-158)||(36962622-36962685)
chr4 (123-159)||(53756766-53756802)
chr4 (125-158)||(37707392-37707425)
chr4 (114-158)||(2792300-2792344)
chr4 (13-53)||(19311299-19311339)
chr4 (114-154)||(26474851-26474891)
chr4 (120-158)||(10388572-10388610)
chr4 (119-156)||(12296061-12296098)
chr4 (120-152)||(17416541-17416573)
chr4 (84-151)||(43076996-43077066)
[»] chr8 (30 HSPs)
chr8 (29-184)||(17656943-17657098)
chr8 (28-184)||(10248493-10248649)
chr8 (79-184)||(30236119-30236224)
chr8 (88-183)||(15906672-15906767)
chr8 (90-183)||(31207364-31207457)
chr8 (85-184)||(36630822-36630921)
chr8 (86-170)||(24995393-24995477)
chr8 (109-184)||(15821400-15821475)
chr8 (29-184)||(35062442-35062597)
chr8 (86-184)||(9519484-9519582)
chr8 (86-184)||(34389003-34389101)
chr8 (83-184)||(10552254-10552354)
chr8 (86-184)||(32066293-32066391)
chr8 (84-182)||(32945699-32945797)
chr8 (86-184)||(37986856-37986954)
chr8 (88-184)||(17720706-17720801)
chr8 (84-181)||(12198065-12198162)
chr8 (84-181)||(12442493-12442590)
chr8 (86-158)||(41893399-41893470)
chr8 (86-149)||(16457459-16457522)
chr8 (84-152)||(41791260-41791328)
chr8 (120-159)||(40531242-40531281)
chr8 (114-184)||(12898300-12898370)
chr8 (109-147)||(20138448-20138486)
chr8 (120-158)||(33967337-33967375)
chr8 (98-144)||(3679471-3679517)
chr8 (114-159)||(23264716-23264761)
chr8 (121-154)||(36796621-36796654)
chr8 (85-138)||(38577787-38577840)
chr8 (100-184)||(18690417-18690501)
[»] chr7 (41 HSPs)
chr7 (29-184)||(8745138-8745293)
chr7 (14-184)||(24324723-24324894)
chr7 (28-184)||(6716677-6716832)
chr7 (1-101)||(44755657-44755757)
chr7 (29-184)||(42533194-42533348)
chr7 (32-184)||(1320779-1320932)
chr7 (29-184)||(3478337-3478492)
chr7 (85-184)||(6584894-6584993)
chr7 (75-184)||(16954638-16954748)
chr7 (77-184)||(16828924-16829032)
chr7 (84-182)||(12480873-12480971)
chr7 (85-181)||(34389950-34390046)
chr7 (86-184)||(38306246-38306344)
chr7 (100-184)||(13311824-13311908)
chr7 (86-161)||(9349757-9349832)
chr7 (79-181)||(46133268-46133371)
chr7 (86-184)||(10244167-10244265)
chr7 (84-184)||(11379122-11379223)
chr7 (84-184)||(38485541-38485640)
chr7 (132-203)||(44755589-44755663)
chr7 (100-208)||(33435066-33435178)
chr7 (86-184)||(3419654-3419752)
chr7 (69-184)||(47457003-47457118)
chr7 (85-184)||(35745824-35745923)
chr7 (85-184)||(41089745-41089844)
chr7 (85-183)||(3867102-3867200)
chr7 (86-184)||(37794974-37795072)
chr7 (86-184)||(47325883-47325981)
chr7 (86-184)||(5860286-5860384)
chr7 (84-177)||(23983187-23983280)
chr7 (85-159)||(48058651-48058725)
chr7 (88-169)||(9428105-9428186)
chr7 (29-184)||(36449069-36449224)
chr7 (117-184)||(25160800-25160867)
chr7 (120-158)||(46262151-46262189)
chr7 (123-157)||(17802851-17802885)
chr7 (120-158)||(27993568-27993606)
chr7 (120-158)||(35206725-35206763)
chr7 (109-147)||(44353585-44353623)
chr7 (70-184)||(22568093-22568208)
chr7 (124-158)||(25153231-25153265)
[»] scaffold0119 (1 HSPs)
scaffold0119 (28-184)||(42078-42234)
[»] chr2 (39 HSPs)
chr2 (28-184)||(1269468-1269624)
chr2 (29-172)||(34230198-34230341)
chr2 (29-184)||(37770583-37770737)
chr2 (27-183)||(10173516-10173673)
chr2 (29-185)||(13337258-13337414)
chr2 (13-183)||(41086722-41086883)
chr2 (19-184)||(14106451-14106620)
chr2 (85-172)||(14405195-14405282)
chr2 (31-169)||(22885076-22885214)
chr2 (85-183)||(7874277-7874375)
chr2 (87-166)||(16959985-16960064)
chr2 (86-184)||(39338863-39338961)
chr2 (29-147)||(7695985-7696102)
chr2 (69-166)||(15126391-15126488)
chr2 (29-157)||(2062901-2063029)
chr2 (86-179)||(4471913-4472006)
chr2 (29-184)||(16952323-16952479)
chr2 (29-184)||(17022988-17023144)
chr2 (29-184)||(17060294-17060450)
chr2 (85-184)||(387158-387257)
chr2 (85-180)||(18681054-18681149)
chr2 (31-164)||(33788575-33788708)
chr2 (84-184)||(25504904-25505005)
chr2 (87-184)||(31902413-31902510)
chr2 (69-184)||(17079154-17079270)
chr2 (31-184)||(27739960-27740113)
chr2 (117-170)||(10524096-10524149)
chr2 (85-162)||(5254263-5254340)
chr2 (110-170)||(23650384-23650444)
chr2 (120-158)||(4162052-4162090)
chr2 (111-184)||(17105396-17105470)
chr2 (84-147)||(3745356-3745420)
chr2 (120-160)||(9560820-9560860)
chr2 (123-158)||(23665439-23665474)
chr2 (98-148)||(27880139-27880189)
chr2 (83-159)||(915447-915523)
chr2 (117-158)||(36276200-36276241)
chr2 (100-184)||(15710692-15710776)
chr2 (114-158)||(34143079-34143123)
[»] chr1 (34 HSPs)
chr1 (29-185)||(27102175-27102331)
chr1 (29-184)||(6583157-6583312)
chr1 (84-185)||(17033570-17033672)
chr1 (33-182)||(34774858-34775007)
chr1 (44-184)||(32864517-32864657)
chr1 (86-184)||(41920437-41920535)
chr1 (108-189)||(9313309-9313390)
chr1 (69-184)||(19598621-19598736)
chr1 (85-184)||(46814464-46814563)
chr1 (86-184)||(24658914-24659012)
chr1 (86-184)||(31585758-31585856)
chr1 (29-178)||(16147546-16147698)
chr1 (100-184)||(27031852-27031936)
chr1 (86-182)||(46692817-46692913)
chr1 (117-184)||(7857638-7857705)
chr1 (99-178)||(38544749-38544828)
chr1 (86-184)||(5389419-5389517)
chr1 (86-184)||(30685902-30686000)
chr1 (85-208)||(24684475-24684602)
chr1 (84-184)||(4651765-4651864)
chr1 (33-153)||(10785405-10785524)
chr1 (29-184)||(42374148-42374304)
chr1 (86-184)||(5459146-5459244)
chr1 (87-184)||(50589206-50589303)
chr1 (109-184)||(24449951-24450026)
chr1 (114-171)||(15840938-15840995)
chr1 (90-180)||(46603381-46603472)
chr1 (88-161)||(27905420-27905493)
chr1 (114-158)||(30655571-30655615)
chr1 (29-96)||(31290960-31291027)
chr1 (88-146)||(9081506-9081563)
chr1 (120-158)||(38564912-38564950)
chr1 (115-156)||(42374049-42374090)
chr1 (114-158)||(33034672-33034716)
[»] chr5 (25 HSPs)
chr5 (29-180)||(14302371-14302522)
chr5 (28-177)||(13954174-13954323)
chr5 (26-184)||(7195178-7195335)
chr5 (29-184)||(8297453-8297608)
chr5 (33-184)||(33258827-33258978)
chr5 (30-184)||(7391979-7392127)
chr5 (29-169)||(26045905-26046045)
chr5 (29-181)||(25991995-25992147)
chr5 (86-181)||(34378086-34378181)
chr5 (28-154)||(21402777-21402903)
chr5 (27-184)||(39184124-39184283)
chr5 (100-184)||(24072278-24072362)
chr5 (86-162)||(22675322-22675398)
chr5 (85-180)||(27713058-27713153)
chr5 (90-183)||(39024452-39024545)
chr5 (86-184)||(698346-698444)
chr5 (88-174)||(23426339-23426425)
chr5 (90-184)||(31721662-31721756)
chr5 (84-184)||(8730902-8731003)
chr5 (87-184)||(17854066-17854163)
chr5 (87-180)||(18593232-18593325)
chr5 (85-169)||(29087481-29087565)
chr5 (116-159)||(12046265-12046308)
chr5 (69-152)||(25658132-25658217)
chr5 (126-158)||(25341709-25341741)
[»] chr3 (34 HSPs)
chr3 (29-183)||(14879421-14879576)
chr3 (29-184)||(37123367-37123521)
chr3 (70-184)||(14193925-14194041)
chr3 (1-183)||(25647670-25647853)
chr3 (31-159)||(33143891-33144020)
chr3 (69-184)||(47945691-47945806)
chr3 (85-183)||(19176488-19176586)
chr3 (29-162)||(14755205-14755339)
chr3 (84-177)||(1652882-1652975)
chr3 (28-154)||(39021217-39021342)
chr3 (85-184)||(5556555-5556655)
chr3 (85-170)||(43012374-43012459)
chr3 (28-151)||(823374-823498)
chr3 (86-158)||(17550968-17551040)
chr3 (14-183)||(40023496-40023667)
chr3 (29-183)||(27398944-27399099)
chr3 (85-183)||(9584050-9584148)
chr3 (84-184)||(30935386-30935486)
chr3 (85-184)||(23328347-23328446)
chr3 (85-184)||(45398781-45398880)
chr3 (117-184)||(34475783-34475850)
chr3 (86-184)||(2392504-2392602)
chr3 (86-184)||(20611768-20611866)
chr3 (84-184)||(25594516-25594616)
chr3 (109-184)||(2394274-2394349)
chr3 (120-159)||(20710740-20710779)
chr3 (108-158)||(24099347-24099397)
chr3 (112-158)||(30127273-30127319)
chr3 (86-184)||(45163838-45163938)
chr3 (121-184)||(31482869-31482932)
chr3 (33-95)||(28937659-28937721)
chr3 (109-158)||(31424247-31424296)
chr3 (109-158)||(2782090-2782139)
chr3 (114-158)||(19295891-19295935)
[»] chr6 (21 HSPs)
chr6 (29-184)||(20701744-20701899)
chr6 (29-184)||(32935280-32935435)
chr6 (84-182)||(26534712-26534813)
chr6 (29-183)||(9224027-9224182)
chr6 (84-182)||(26216015-26216112)
chr6 (28-153)||(13423482-13423607)
chr6 (86-182)||(21266100-21266196)
chr6 (29-182)||(3880539-3880677)
chr6 (86-184)||(3117478-3117576)
chr6 (110-184)||(16510323-16510397)
chr6 (84-184)||(12794099-12794200)
chr6 (86-182)||(21264973-21265069)
chr6 (91-184)||(33968615-33968709)
chr6 (28-115)||(15120537-15120624)
chr6 (114-172)||(34105410-34105468)
chr6 (114-158)||(34090374-34090418)
chr6 (73-168)||(15944020-15944116)
chr6 (98-158)||(34092806-34092866)
chr6 (123-158)||(7546464-7546499)
chr6 (99-144)||(32316393-32316438)
chr6 (122-158)||(12129228-12129264)
[»] scaffold0063 (1 HSPs)
scaffold0063 (14-182)||(58114-58282)
[»] scaffold0050 (1 HSPs)
scaffold0050 (14-184)||(36692-36864)
[»] scaffold1613 (1 HSPs)
scaffold1613 (99-178)||(1028-1107)
[»] scaffold0620 (2 HSPs)
scaffold0620 (114-158)||(3841-3885)
scaffold0620 (98-158)||(8140-8200)
[»] scaffold0068 (1 HSPs)
scaffold0068 (86-158)||(35770-35841)
[»] scaffold0062 (2 HSPs)
scaffold0062 (100-184)||(47078-47162)
scaffold0062 (100-184)||(59604-59688)


Alignment Details
Target: scaffold0200 (Bit Score: 117; Significance: 9e-60; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 117; E-Value: 9e-60
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 19524 - 19368
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||| ||||||||||||||| || ||| |||| |||  |||||||||||||||||||||||||||| ||||||||| |||||||||||||| |||||    
T  19524 aaaagattattcagcttccaccaactctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgagccaaagaactgacttccgat 19425  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19424 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 19368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 109; Significance: 5e-55; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 109; E-Value: 5e-55
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 25753312 - 25753160
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||||||||||||||  ||||||| |||| |||  |||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||    
T  25753312 aaagatcattcagcttccactgcctatcgacctccgatccaccgaaagaaacaataaaaagcccaaaatcaaacttgagccaaagaactgactcccgatc 25753213  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac 181  Q
    |||||||||||||||||| ||||||||||||||||||||||| ||| ||||||    
T  25753212 tcgaatcaaaagtgatcgccccaccagactttaggaccaaataagacgggcac 25753160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 53823361 - 53823517
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||||| ||| |||||||||||| ||| |||  |||  |||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  53823361 aaaagatcaatcaacttccaccacctctcgaccttcgatcaaccgaaagaaaccataaaaaacccaaaaccaaacttgagccaaagaactgactcccgat 53823460  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||    
T  53823461 ctcgaatcaaaagtgattggtccaccagactttatgaccaaatcagaagggcacccc 53823517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 2061679 - 2061834
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    |||||||||||| |||||||||||| ||| |||| |||  ||||||||||| ||| |||||||||||||||||  ||||||||||||||||||| | |||    
T  2061679 aaagatcattcaacttccaccacctctcgacctccgatccaccgaaagaaatcatcaaaagcccaaaatcaaaactgatccaaagaactgactctcaatc 2061778  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||||||| |||||||||||||||||| |||||||  ||||||||||    
T  2061779 tcgaatcaaaagtgatcagcccaccagactttaggatcaaatcaagagggcacccc 2061834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 75 - 181
Target Start/End: Original strand, 22811147 - 22811253
Alignment:
Q  75 agaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcaga 174  Q
    ||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||    
T  22811147 agaaaccataaaaagcctaaaaccaaacttgagccaaagaactgactcccgatctcgaataaaaaatgatcggcccaccagactttaagaccaaatcaga 22811246  T
Q  175 agggcac 181  Q
    |||||||    
T  22811247 agggcac 22811253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 33 - 184
Target Start/End: Original strand, 39420958 - 39421109
Alignment:
Q  33 atcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcga 132  Q
    |||| |||| ||||||||||| |||  ||| |||  ||||||| |||||||||||||||||||| ||||  ||||| || ||| ||||||||||||||||    
T  39420958 atcaatcagtttccaccacctctcgatctccgatccaccgaaaaaaaccataaaaagcccaaaaccaaaactgatctaaggaattgactcccgatctcga 39421057  T
Q  133 atcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||||||||||||| || || ||||| ||||||||||||||||    
T  39421058 atcaaaagtgatcggcccaccaggctataagaccatatcagaagggcacccc 39421109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 38637174 - 38637302
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||||||||||||||||||| ||| |||| |||  ||| |||||||||||||||||||||||| |  |||| | |||||||| ||||||||||||    
T  38637174 aaagatcattcagcttccaccacctctcgacctccgatccaccaaaagaaaccataaaaagcccaaaa-cctacttaagccaaagaattgactcccgatc 38637272  T
Q  129 tcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||| |||||||    
T  38637273 tcgaatcaaaagtgatcggcccgccagact 38637302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 158
Target Start/End: Original strand, 41117908 - 41118037
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||||||||||||||||||| ||| ||||||||  | |||||||||||||||||||||||||| | || |||| |||||||||| ||| ||||||    
T  41117908 aaagatcattcagcttccaccacctctcgacctctgatccatcgaaagaaaccataaaaagcccaaaacctaatttgagccaaagaacttacttccgatc 41118007  T
Q  129 tcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||  ||| |||||||    
T  41118008 tcgaatcaaaagtgatcttccctccagact 41118037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 48098473 - 48098320
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||| |||| |||||||||||| ||| |||  |||  | |||||||||| ||||||||||||||| ||||||| ||||||  |||||||||||||||    
T  48098473 aaagatcgttcatcttccaccacctctcgaccttcgatccatcgaaagaaactataaaaagcccaaaaccaaacttaatccaacaaactgactcccgatc 48098374  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||| |||||||||| |||||| | | ||||| ||||||||||||||||||||    
T  48098373 tcgaaacaaaagtgataggcccatcgggctttatgaccaaatcagaagggcacc 48098320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 72 - 179
Target Start/End: Complemental strand, 49747624 - 49747517
Alignment:
Q  72 gaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatc 171  Q
    ||||||| ||||||||||| ||||| ||||||||||| ||||||||||||| ||||||| ||||||||||||||||| ||||||||||||| ||||||||    
T  49747624 gaaagaacccataaaaagctcaaaaccaaacttgatcaaaagaactgactctcgatctcaaatcaaaagtgatcggctcaccagactttagaaccaaatc 49747525  T
Q  172 agaagggc 179  Q
    | ||||||    
T  49747524 aaaagggc 49747517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 68 - 184
Target Start/End: Original strand, 46698764 - 46698881
Alignment:
Q  68 taccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacc 166  Q
    |||||||||||  | |||| ||||||||| |||| ||||| |||||||||||||||||||||||||||||||||  ||||||||||||||||  ||||||    
T  46698764 taccgaaagaacacctaaacagcccaaaaacaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcaatcggcccaccagactacaggacc 46698863  T
Q  167 aaatcagaagggcacccc 184  Q
    ||||||||||||||||||    
T  46698864 aaatcagaagggcacccc 46698881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 38929927 - 38929812
Alignment:
Q  69 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 167  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||||||||||||  ||||||||||||||||||||||||||| ||||||| ||||||     
T  38929927 accgaaagaacaccataaaa-gcccaaaatcaaacttgagccaaagaactgactcttgatctcgaatcaaaagtgatcggcccagcagacttcaggaccc 38929829  T
Q  168 aatcagaagggcacccc 184  Q
    || |||| |||||||||    
T  38929828 aaccagacgggcacccc 38929812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 19815235 - 19815320
Alignment:
Q  99 aaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||| |||||||||||||||| |||||||||| |||||| ||||| ||||||||||||||||||||| ||||||||||||||    
T  19815235 aaacttgagccaaagaactgactcctgatctcgaataaaaagtaatcggtccaccagactttaggaccaaaacagaagggcacccc 19815320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 12296260 - 12296160
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||||||||||||||||||| ||||||||||||||   |||||||||||||||| | ||||| |||||||||| ||||||||| |||| ||||||||    
T  12296260 aaaaagcccaaaatcaaacttgaaccaaagaactgacttttgatctcgaatcaaaagcgctcggcacaccagacttcaggaccaaaccagaggggcaccc 12296161  T
Q  184 c 184  Q
    |    
T  12296160 c 12296160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 31050659 - 31050758
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||| | ||||  | ||||||| || ||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  31050659 aaaagcccaaaaaccaactcaaaccaaagacctaacttccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagtagggcacccc 31050758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 8255110 - 8255012
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  ||||||||||||| | ||||||| |||||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  8255110 aaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccc 8255012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 8268528 - 8268430
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  ||||||||||||| | ||||||| |||||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  8268528 aaagcccaaaaaccaacttgagtcaaagaactgacttctgatctcggatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcacccc 8268430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 16501816 - 16501718
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||||| |||||| || ||||||| ||||||||||||||||||||||||| ||||||||||||| |||| |||| |||||| ||||| ||||    
T  16501816 aaaaagcccaaaaccaaactagaaccaaagagctgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggatcaaatcggaaggccacc 16501718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 35800574 - 35800476
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||||| |||||| ||  ||||||||||||| |||||||||||||||||| ||||||  |||||||||| || |||||||||||||||||||    
T  35800574 aaaaagcccaaaaccaaactggaatcaaagaactgacttccgatctcgaatcaaaagcgatcggttcaccagacttcagaaccaaatcagaagggcacc 35800476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 26 - 184
Target Start/End: Complemental strand, 19673243 - 19673086
Alignment:
Q  26 ccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactccc 124  Q
    |||||| |||||| ||||||||||| |||||| ||   |||  |||||||||| ||||  |||| |||||||  |||||||| ||||||||||||||||     
T  19673243 ccaaaatatcatttagcttccaccatctatcgaccgtcgatccaccgaaagaacaccaacaaaa-cccaaaactaaacttgagccaaagaactgactcct 19673145  T
Q  125 gatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||| ||||| ||  || ||||||||||||||||||||| ||||||||||||||    
T  19673144 gatctcgaat-aaaagggaatggtccaccagactttaggaccaaaacagaagggcacccc 19673086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 4305808 - 4305712
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    |||||| |||| | |||||||  ||||||||| |||||||||||||||||||||||||||| ||||||||||| ||| ||||||| || ||||||||    
T  4305808 aaagcctaaaaaccaacttgagacaaagaactaactcccgatctcgaatcaaaagtgatcgccccaccagactatagtaccaaattagcagggcacc 4305712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 79 - 173
Target Start/End: Original strand, 6599936 - 6600030
Alignment:
Q  79 accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcag 173  Q
    |||||||| |||||||||  ||||||||  |||||||| ||||||||||||| ||||||||| ||||||||||||||||| |||  |||||||||    
T  6599936 accataaatagcccaaaacaaaacttgaatcaaagaaccgactcccgatctctaatcaaaagcgatcggcccaccagactctagagccaaatcag 6600030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 72 - 145
Target Start/End: Original strand, 16833005 - 16833078
Alignment:
Q  72 gaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatc 145  Q
    ||||||||||||||||||||||||  ||||||||||||||  || ||||| |||||||||||||||||||||||    
T  16833005 gaaagaaaccataaaaagcccaaatccaaacttgatccaacaaaatgacttccgatctcgaatcaaaagtgatc 16833078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 85 - 166
Target Start/End: Complemental strand, 28966951 - 28966870
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacc 166  Q
    |||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||  ||||| || ||||||||| ||||||    
T  28966951 aaaagcccaaaaccaaacttgagccaaagaactgactcccaatctcgaatcaaaaacgatcgccctaccagacttcaggacc 28966870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 96 - 184
Target Start/End: Original strand, 19311351 - 19311437
Alignment:
Q  96 atcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||||| |||||||||| |||  |||||||||||||| ||||||    
T  19311351 atcaaacatgatccaaataactgactcccg-tctcgaatcaaaagtgatcgacccaccagac-ttaaaaccaaatcagaaggacacccc 19311437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 2825867 - 2825768
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||| | |  |||| |||||||  ||| ||||||||||||||||||| ||||||||||||| |||||||| |||||||||| || |||||||    
T  2825867 aaaagcccaaaaaccacattgagccaaagaggtgattcccgatctcgaatcaaaaatgatcggcccaccggactttagaaccaaatcagcagagcacccc 2825768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 111 - 178
Target Start/End: Original strand, 21387227 - 21387294
Alignment:
Q  111 aagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaaggg 178  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||  || |||||||||||||||    
T  21387227 aagaactgacttccgatctcgaatcaaaagtgatcggtccaccagactccagcaccaaatcagaaggg 21387294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 30964520 - 30964426
Alignment:
Q  90 cccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| | |||||||  |||||||| ||||||||||| |||||||||||||||||||||| |||| | ||| ||||||| || ||||||||||    
T  30964520 cccaaaaaccaacttgagtcaaagaacggactcccgatcacgaatcaaaagtgatcggcccatcagattatagtaccaaattagcagggcacccc 30964426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 39041300 - 39041344
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||| ||||||||||||||||||||||||||||||||||    
T  39041300 aactgactcctgatctcgaatcaaaagtgatcggcccaccagact 39041344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 29 - 96
Target Start/End: Complemental strand, 49528212 - 49528145
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaa 96  Q
    |||||||||||| ||||||||||||  || |||| |||  ||||||||||||||||||||||||||||    
T  49528212 aaagatcattcatcttccaccacctcccgacctccgatccaccgaaagaaaccataaaaagcccaaaa 49528145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 174
Target Start/End: Original strand, 24740103 - 24740189
Alignment:
Q  88 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcaga 174  Q
    ||||||||| |||| |||| ||||| |||||||||||||||| |||| | ||| |||||||||||||||| |  ||||||| |||||    
T  24740103 agcccaaaaccaaatttgaaccaaataactgactcccgatcttgaattataagcgatcggcccaccagacatcgggaccaactcaga 24740189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 40813813 - 40813851
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||||||||||||||||||||    
T  40813813 ctcccgatctcgaatcaaaagtgatcggcccaccagact 40813851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 152
Target Start/End: Original strand, 30167576 - 30167628
Alignment:
Q  100 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccac 152  Q
    |||||||  |||||||| ||||||||||||||||||||||||||||| |||||    
T  30167576 aacttgagtcaaagaaccgactcccgatctcgaatcaaaagtgatcgacccac 30167628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 94 - 158
Target Start/End: Original strand, 36962622 - 36962685
Alignment:
Q  94 aaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||| |||||||  |||||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  36962622 aaatccaacttgagtcaaaga-ctgactcctgatctcgaatcaaaagtaatcggcccaccagact 36962685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 123 - 159
Target Start/End: Complemental strand, 53756802 - 53756766
Alignment:
Q  123 ccgatctcgaatcaaaagtgatcggcccaccagactt 159  Q
    |||||||||||||||||||||||||||||||||||||    
T  53756802 ccgatctcgaatcaaaagtgatcggcccaccagactt 53756766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 158
Target Start/End: Original strand, 37707392 - 37707425
Alignment:
Q  125 gatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||||||||||||||||||||||||||||||||    
T  37707392 gatctcgaatcaaaagtgatcggcccaccagact 37707425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 2792300 - 2792344
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||| ||||||||||||||||||||||||||| || |||||    
T  2792300 aactgacttccgatctcgaatcaaaagtgatcggcctactagact 2792344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 19311299 - 19311339
Alignment:
Q  13 aaaaaactcttaaccaaaagatcattcagcttccaccacct 53  Q
    ||||| ||||||||||||||||||| |||||||||||||||    
T  19311299 aaaaagctcttaaccaaaagatcatacagcttccaccacct 19311339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 154
Target Start/End: Complemental strand, 26474891 - 26474851
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccacca 154  Q
    |||| |||| |||||||||||||||||||||||||||||||    
T  26474891 aactaactctcgatctcgaatcaaaagtgatcggcccacca 26474851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 10388610 - 10388572
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  10388610 ctcccgacctcgaatcaaaagtgatcggcccacaagact 10388572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 119 - 156
Target Start/End: Complemental strand, 12296098 - 12296061
Alignment:
Q  119 actcccgatctcgaatcaaaagtgatcggcccaccaga 156  Q
    ||||||||||||||| ||||||| ||||||||||||||    
T  12296098 actcccgatctcgaagcaaaagtaatcggcccaccaga 12296061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 120 - 152
Target Start/End: Original strand, 17416541 - 17416573
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccac 152  Q
    |||| ||||||||||||||||||||||||||||    
T  17416541 ctcctgatctcgaatcaaaagtgatcggcccac 17416573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 43077066 - 43076996
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaa---ctgactcccgatctcgaatcaaaagtgatcggccca 151  Q
    ||||||||||||| ||||||||| ||||||||    |||||| ||||||||||| ||||  ||||||||||    
T  43077066 aaaaagcccaaaagcaaacttgaaccaaagaaaagttgactctcgatctcgaataaaaaacgatcggccca 43076996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 2e-54; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 17656943 - 17657098
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||||||||||||||||||||||| |||| |||  ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  17656943 aaagatcattcagcttccaccacctatcgacctccgatccaccgaaagaaaccataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatc 17657042  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||| ||||||| |||||||| |||| | |||||||||||||    
T  17657043 tcgaatcaaaagtgatcgacccaccatactttaggtccaacttagaagggcacccc 17657098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 10248493 - 10248649
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||||| ||||||||||||||||  || |||| |||  ||| |||||||||||| |||||  |||| ||||||||| ||||||||||||||||||||    
T  10248493 aaaagatcaatcagcttccaccacctcgcggcctccgatccaccaaaagaaaccatataaagcaaaaaaccaaacttgagccaaagaactgactcccgat 10248592  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    || ||||||||||||||||| |||||| | |||||||| |||| |||||| ||||||    
T  10248593 cttgaatcaaaagtgatcggtccaccaaattttaggacaaaattagaaggacacccc 10248649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 79 - 184
Target Start/End: Original strand, 30236119 - 30236224
Alignment:
Q  79 accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaaggg 178  Q
    |||| ||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||| |  |||||||||||||||    
T  30236119 accaaaaaaagcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgtcccaccagacttcaaaaccaaatcagaaggg 30236218  T
Q  179 cacccc 184  Q
    ||||||    
T  30236219 cacccc 30236224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 88 - 183
Target Start/End: Complemental strand, 15906767 - 15906672
Alignment:
Q  88 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| || | ||||||||    
T  15906767 agcccaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaatgtgatcggcccaccagacttcaggaccaaaccaaacgggcaccc 15906672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 31207364 - 31207457
Alignment:
Q  90 cccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||||||||    
T  31207364 cccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcaccc 31207457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 36630921 - 36630822
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||| |||||| ||  |||||||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| || ||||||||||    
T  36630921 aaaagcccaaaaacaaactagagtcaaagaactgacacccgatctcgaattaaaagtgatcggcccaccagactttagaaccaaattagcagggcacccc 36630822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 86 - 170
Target Start/End: Original strand, 24995393 - 24995477
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 170  Q
    ||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  24995393 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaat 24995477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 15821400 - 15821475
Alignment:
Q  109 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||| |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||||||    
T  15821400 caaagagctgactcccgatctcgaatcaaaagtgatcagcccaccagactttagaaccaaatcagcagggcacccc 15821475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 35062597 - 35062442
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    |||||||||||| |||||||||||   |  ||||||||  |||||| |||  | |||||||||||||| |||||| || | | ||||||||||| |||||    
T  35062597 aaagatcattcaccttccaccaccgcgcaacctctgatccaccgaaggaacacctaaaaagcccaaaaccaaactagaacaagagaactgactctcgatc 35062498  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||  |||||||||||||||||| || |||||||||||  ||||||||    
T  35062497 tcgaatcaaaatcgatcggcccaccagacttcagaaccaaatcagagaggcacccc 35062442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 9519582 - 9519484
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  ||||||||||||||||||||||||||||||| |||||||||||| ||||| ||| ||||||| || ||||||||||    
T  9519582 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaactgatcggcccactagactatagtaccaaattagcagggcacccc 9519484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 34389003 - 34389101
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  ||||||||||||||  |||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||    
T  34389003 aaagcccaaaaaccaacttgagtcaaagaactgactcttgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccc 34389101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 83 - 184
Target Start/End: Complemental strand, 10552354 - 10552254
Alignment:
Q  83 taaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    |||||||| ||||| |||||| || ||| |||||||||||||||||| |||||||||| |||||||||||||||||| || |||||||||| ||||||||    
T  10552354 taaaaagcacaaaaccaaactagaaccagagaactgactcccgatctagaatcaaaagcgatcggcccaccagacttcagaaccaaatcag-agggcacc 10552256  T
Q  183 cc 184  Q
    ||    
T  10552255 cc 10552254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 32066293 - 32066391
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||| ||  |||||| |||||||||||| |||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||    
T  32066293 aaagcccaaaaaccaactggagtcaaagagctgactcccgatttcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggcacccc 32066391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 32945699 - 32945797
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||||| |||||||||  ||||||| ||||||||||||||||||||||||||||| |||||| | |||| || | ||||||||||| |||||    
T  32945699 aaaaagcccaaaaccaaacttgaatcaaagaattgactcccgatctcgaatcaaaagtgatcagcccactatacttcagaatcaaatcagaagagcacc 32945797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 37986856 - 37986954
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||| ||||| | |||||||  ||||||||||||||||||||||||||||||| |||| ||||||||||||| ||  ||||||| || ||||||||||    
T  37986856 aaagcacaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaaatgattggcccaccagactataacaccaaattagcagggcacccc 37986954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 88 - 184
Target Start/End: Original strand, 17720706 - 17720801
Alignment:
Q  88 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||| | || |||| ||||||||||||||||||||| ||||||||||| |||| |||||||| |||||||||||||| ||||  ||||||||    
T  17720706 agcccaaaacctaaattgaaccaaagaactgactcccgatc-cgaatcaaaagcgatcagcccaccatactttaggaccaaaccagacaggcacccc 17720801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 12198065 - 12198162
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac 181  Q
    ||||||| ||||| ||||||||| ||||||||||||||||| || |  ||| |||||||||||| ||||||||||| | |||||||| ||||| ||||    
T  12198065 aaaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagacttcatgaccaaattagaagagcac 12198162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 181
Target Start/End: Original strand, 12442493 - 12442590
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac 181  Q
    ||||||| ||||| ||||||||| ||||||||||||||||| || |  ||| |||||||||||| ||||||||||| | |||||||| ||||| ||||    
T  12442493 aaaaagctcaaaaccaaacttgagccaaagaactgactcccaattttcaattaaaagtgatcggtccaccagacttcatgaccaaattagaagagcac 12442590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 41893399 - 41893470
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||||||||| ||| |||||  |||||||||||||||||||||||||||||||||| | |||||||||||||    
T  41893399 aaagcccaaaaacaa-cttgagacaaagaactgactcccgatctcgaatcaaaagtggttggcccaccagact 41893470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 16457459 - 16457522
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcc 149  Q
    |||||| |||| | |||||||  |||||||||||||||||||||||||||||||||||||||||    
T  16457459 aaagcctaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcc 16457522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 84 - 152
Target Start/End: Original strand, 41791260 - 41791328
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccac 152  Q
    |||||| ||||||  |||||||| |||||||| |||||| ||||||||||||||||| ||||| |||||    
T  41791260 aaaaagtccaaaactaaacttgaaccaaagaagtgactctcgatctcgaatcaaaagcgatcgacccac 41791328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 120 - 159
Target Start/End: Complemental strand, 40531281 - 40531242
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 159  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  40531281 ctcccgatctcgaatcaaaagtgatcggcccatcagactt 40531242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 114 - 184
Target Start/End: Original strand, 12898300 - 12898370
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||| |||||||||||||||||||||||  ||||||||| ||  ||||||| |  ||||||||||    
T  12898300 aactgactccggatctcgaatcaaaagtgatcgggtcaccagactatattaccaaattaatagggcacccc 12898370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 20138486 - 20138448
Alignment:
Q  109 caaagaactgactcccgatctcgaatcaaaagtgatcgg 147  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  20138486 caaagaactgactcccgatctcaaatcaaaagtgatcgg 20138448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 33967375 - 33967337
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33967375 ctcctgatctcgaatcaaaagtgatcggcccaccagact 33967337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 144
Target Start/End: Complemental strand, 3679517 - 3679471
Alignment:
Q  98 caaacttgatccaaagaactgactcccgatctcgaatcaaaagtgat 144  Q
    |||||||||  ||||| || |||||||||||||||||||||||||||    
T  3679517 caaacttgaatcaaagcaccgactcccgatctcgaatcaaaagtgat 3679471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 114 - 159
Target Start/End: Complemental strand, 23264761 - 23264716
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 159  Q
    |||||||||||||||||||||||||| |||| || ||| |||||||    
T  23264761 aactgactcccgatctcgaatcaaaattgataggtccatcagactt 23264716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 121 - 154
Target Start/End: Complemental strand, 36796654 - 36796621
Alignment:
Q  121 tcccgatctcgaatcaaaagtgatcggcccacca 154  Q
    ||||||||||||||||||||||||||||| ||||    
T  36796654 tcccgatctcgaatcaaaagtgatcggccaacca 36796621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 85 - 138
Target Start/End: Original strand, 38577787 - 38577840
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaa 138  Q
    ||||| |||||| | ||||| | |||||||||| ||||||||||||||||||||    
T  38577787 aaaagtccaaaaaccaacttaaaccaaagaactaactcccgatctcgaatcaaa 38577840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 18690501 - 18690417
Alignment:
Q  100 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| | |||||||||| |  ||||||||||||||||||||| ||  |||||||| |  ||  | |||||||||||||||||    
T  18690501 aacttgaactaaagaactgattgacgatctcgaatcaaaagtgattggttcaccagacatctgggtctaatcagaagggcacccc 18690417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 108; Significance: 2e-54; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 8745293 - 8745138
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||| |||||||||| |||| ||| |||| |||  |||||||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||    
T  8745293 aaagatcatgcagcttccacaacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgatccaacgaactgaatcccgatc 8745194  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||    
T  8745193 tcgaatcaaaagtgatcggcccaccagaatttaggaccaaatcagaaggccacccc 8745138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 24324723 - 24324894
Alignment:
Q  14 aaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaa 112  Q
    |||| ||| ||||| ||||||||||||||||||||||||  ||| |||| |||  ||| |||||||||||||||||||||||| |||| ||||| |||||    
T  24324723 aaaagctcctaaccgaaagatcattcagcttccaccacccctcgacctccgatccacctaaagaaaccataaaaagcccaaaaccaaaacttgagccaaa 24324822  T
Q  113 gaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||| ||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||    
T  24324823 gaattgactcccgatctcgaatcaaaattgatcggcccaccaaactttaagaccaaatcagaagggcacccc 24324894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 6716677 - 6716832
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||||| |||||||||||||||| ||| | || |||  |||||||||||||||||||| ||||| | ||||||||| ||||||||||||||||||||    
T  6716677 aaaagatcaatcagcttccaccacctctcgacttc-gatccaccgaaagaaaccataaaaaacccaagaccaaacttgagccaaagaactgactcccgat 6716775  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||||| ||||||||||| ||  ||||||||||||||||||    
T  6716776 ctcgaatcaaaagtgatcggccaaccagactttatgattaaatcagaagggcacccc 6716832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 89; E-Value: 4e-43
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44755757 - 44755657
Alignment:
Q  1 gagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaa 100  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  44755757 gagctacctccgaaaaaactcttatccaaaagatcattcagcttccaccacctatcgacctctgatataccgaaagaaaccataaaaagcccaaaatcaa 44755658  T
Q  101 a 101  Q
    |    
T  44755657 a 44755657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 42533194 - 42533348
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||| ||||| | |||||||||  || ||||||||  |||||||||||||||||||||||||||  ||||||| | |||||| | ||||||||||||    
T  42533194 aaagatcgttcagttgccaccacctcacgacctctgatccaccgaaagaaaccataaaaagcccaaac-caaacttaagccaaaggattgactcccgatc 42533292  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  42533293 tcgaatcaaaagtgatcagcccaccagactttaggaccaaatcaggagggcacccc 42533348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 32 - 184
Target Start/End: Complemental strand, 1320932 - 1320779
Alignment:
Q  32 gatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctc 130  Q
    |||||| ||| | ||||| ||| ||| |||| |||  |||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||| |     
T  1320932 gatcatacagttgccaccccctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaaacttgagccaaagaactgacttccgatttt 1320833  T
Q  131 gaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||    
T  1320832 gaatcaaaagtgatcggcccaccagactttatgaccaaatcaaaagggcacccc 1320779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 3478492 - 3478337
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    |||||||||||||||||| |||||| |||  ||| |||  |||||||||| |||| | |||||||||||  || ||||| |||||||||| |||||||||    
T  3478492 aaagatcattcagcttccgccacctctcgatctccgatccaccgaaagaacacca-acaaagcccaaaactaatcttgagccaaagaactaactcccgat 3478394  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  3478393 ctcgaatcaaaagtgatcggcccaccaaactttaggaccaaaacagaagggcacccc 3478337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 6584993 - 6584894
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||| | ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  6584993 aaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccc 6584894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 75 - 184
Target Start/End: Complemental strand, 16954748 - 16954638
Alignment:
Q  75 agaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcag 173  Q
    |||||||||||||||||||||| |||| |||||  |||||||||||||  |||||||||| ||||||||||||| | |||||||||||||||||||||||    
T  16954748 agaaaccataaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcggtcaaccagactttaggaccaaatcag 16954649  T
Q  174 aagggcacccc 184  Q
    |||||||||||    
T  16954648 aagggcacccc 16954638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 77 - 184
Target Start/End: Original strand, 16828924 - 16829032
Alignment:
Q  77 aaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaa 175  Q
    |||||||||||||||||||| |||| |||||  |||||||||||||  |||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  16828924 aaaccataaaaagcccaaaaccaaaacttgagtcaaagaactgactttcgatctcgaaacaaaagtgatcagccaaccagactttaggaccaaatcagaa 16829023  T
Q  176 gggcacccc 184  Q
    |||||||||    
T  16829024 gggcacccc 16829032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 84 - 182
Target Start/End: Complemental strand, 12480971 - 12480873
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    |||||||| |||| ||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||||| ||||||||||| ||||    
T  12480971 aaaaagccaaaaaccaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccaaacttcaggacaaaatcagaaggccacc 12480873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 85 - 181
Target Start/End: Complemental strand, 34390046 - 34389950
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac 181  Q
    |||||||||||| | ||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||  |||||||||| |||||||    
T  34390046 aaaagcccaaaaaccaacttaagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttaaaaccaaatcagcagggcac 34389950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 38306344 - 38306246
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||    
T  38306344 aaagcccaaaaaccaacttgagtcaaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccc 38306246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 13311908 - 13311824
Alignment:
Q  100 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||  | ||||||| |||| |||||||||    
T  13311908 aacttgaaccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactacatgaccaaaccagacgggcacccc 13311824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 86 - 161
Target Start/End: Complemental strand, 9349832 - 9349757
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 161  Q
    ||||||||||||||||||||| ||  |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  9349832 aaagcccaaaatcaaacttgaacctgagaattgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 9349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 181
Target Start/End: Original strand, 46133268 - 46133371
Alignment:
Q  79 accataaaaagcccaaaatc-aaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagg 177  Q
    |||| ||||||||||||| | |||||||| ||| ||||||||||||||||||| ||||||||| ||||||| |||||||||| || ||||||||||||||    
T  46133268 accaaaaaaagcccaaaaaccaaacttgaaccagagaactgactcccgatctcaaatcaaaagcgatcggctcaccagacttcagcaccaaatcagaagg 46133367  T
Q  178 gcac 181  Q
    ||||    
T  46133368 gcac 46133371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 10244265 - 10244167
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||| |||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||| || ||||||||||    
T  10244265 aaaggccaaaaactaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagattatagcaccaaattagcagggcacccc 10244167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 11379122 - 11379223
Alignment:
Q  84 aaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||||| |||| ||||| |||||| |||||||||||||||||||||||||| ||||||| |||||||||  | |||||||| |||||||||||    
T  11379122 aaaaagcccaaaaccaaaacttgaaccaaagtactgactcccgatctcgaatcaaaagcgatcggctcaccagactacatgaccaaattagaagggcacc 11379221  T
Q  183 cc 184  Q
    ||    
T  11379222 cc 11379223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 38485640 - 38485541
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||||||||| |||||| || ||| | | |||||||||||||||||||||||||||||||||||||||||||| || || || ||||||||||||||    
T  38485640 aaaaagcccaaaaccaaactagaaccagata-ctgactcccgatctcgaatcaaaagtgatcggcccaccagacttcagaacaaattcagaagggcaccc 38485542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 132 - 203
Target Start/End: Complemental strand, 44755663 - 44755589
Alignment:
Q  132 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc---ccacggtacaccagggaaa 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||| ||||    
T  44755663 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccctcaccacggtacaccagagaaa 44755589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 100 - 208
Target Start/End: Complemental strand, 33435178 - 33435066
Alignment:
Q  100 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc----cccacggtacac 195  Q
    |||||||  |||||||||||||||||||||||||||||||||||||| | ||||||||||||| ||||||| |  |||||||||    ||| ||||||||    
T  33435178 aacttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgtctcaccagactttagtaccaaattaacagggcacccctcgcccccggtacac 33435079  T
Q  196 cagggaaaaccaa 208  Q
    ||| |||||||||    
T  33435078 cagagaaaaccaa 33435066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 3419654 - 3419752
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  |||||| |||||||||||||||||||||||||||||| |||||||| ||||||| ||||||| |  ||||||||||    
T  3419654 aaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcagcccaccacactttagtaccaaattaacagggcacccc 3419752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 69 - 184
Target Start/End: Original strand, 47457003 - 47457118
Alignment:
Q  69 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 167  Q
    |||||||||| ||||||||| ||||| ||  |||||||| ||||||||||||||||| ||||| ||||||||| |||||| ||| ||||||| ||||||     
T  47457003 accgaaagaacaccataaaa-gcccataactaaacttgagccaaagaactgactcccaatctcaaatcaaaagcgatcggtccatcagacttcaggacct 47457101  T
Q  168 aatcagaagggcacccc 184  Q
    ||||||| |||||||||    
T  47457102 aatcagacgggcacccc 47457118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 35745824 - 35745923
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||| | ||||||| |||||||  ||||| ||||||||||||||||||||||| ||||| |||||||||| || |||| || ||||||||||    
T  35745824 aaaagcccaaaaaccaacttgagccaaagagatgacttccgatctcgaatcaaaagtgatcagcccatcagactttagaacaaaattagtagggcacccc 35745923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 41089745 - 41089844
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||| ||||| | |||||||  |||||| ||||||||| |||||||||||||||||||||| |||||||||||||| ||||||| || || |||||||    
T  41089745 aaaagctcaaaaaccaacttgagtcaaagagctgactcccaatctcgaatcaaaagtgatcggtccaccagactttagtaccaaattagcagagcacccc 41089844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 3867200 - 3867102
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    |||||||||||| | |||||||  ||||||||||||||||| ||||||||||||||||||| |||||||| | ||||| ||||||| || ||| |||||    
T  3867200 aaaagcccaaaaaccaacttgagtcaaagaactgactcccggtctcgaatcaaaagtgatcagcccaccatattttagtaccaaattagcaggccaccc 3867102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 37795072 - 37794974
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  ||||||||||||||||||||||||||||||| ||| |||||||||| ||| ||  ||||||| || ||||||||||    
T  37795072 aaagcccaaaaaccaacttgactcaaagaactgactcccgatctcgaatcaaaactgaacggcccaccatactatattaccaaattagcagggcacccc 37794974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 47325883 - 47325981
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  |||||| ||||||||||||||| ||||||||| ||||||||||||||||| ||| ||||||| || | ||||||||    
T  47325883 aaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcaaatcaaaagcgatcggcccaccagactatagtaccaaattagcaaggcacccc 47325981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 5860286 - 5860384
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | ||||||   ||||||| |||||||||||||||||||||||| ||| |||||||| |||| ||| ||||||| || ||||||||||    
T  5860286 aaagcccaaaaaccaacttgcgtcaaagaattgactcccgatctcgaatcaaaagcgataggcccaccggactatagtaccaaattagcagggcacccc 5860384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 84 - 177
Target Start/End: Complemental strand, 23983280 - 23983187
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagg 177  Q
    ||||| ||||||| ||||||||| | || ||| |||||||||||||||||||||||  ||||| |||||||||||| | |||||||| ||||||    
T  23983280 aaaaaacccaaaaccaaacttgagctaaggaattgactcccgatctcgaatcaaaaacgatcgacccaccagacttcaagaccaaattagaagg 23983187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 85 - 159
Target Start/End: Original strand, 48058651 - 48058725
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 159  Q
    ||||| |||||| ||||||||| ||||| |||||||| |||||||| ||||||||| ||||| ||||||||||||    
T  48058651 aaaaggccaaaaccaaacttgagccaaaaaactgacttccgatctcaaatcaaaagcgatcgacccaccagactt 48058725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 88 - 169
Target Start/End: Original strand, 9428105 - 9428186
Alignment:
Q  88 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaa 169  Q
    ||||||| | |||||| || || ||||||||||| | |||||||||||||||||||||||| |||||||||  |||||||||    
T  9428105 agcccaagaccaaactagaaccgaagaactgacttctgatctcgaatcaaaagtgatcggctcaccagactacaggaccaaa 9428186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 36449224 - 36449069
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaa-ccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||||||  ||||||||||||| ||  |||| |||  ||||||||||| ||| || ||| ||||||   ||||||| ||||||||||||||||  ||    
T  36449224 aaagatcattatgcttccaccacctctcaacctccgatccaccgaaagaaaaccaaaataagtccaaaacataacttgaaccaaagaactgactcctaat 36449125  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| ||||  |||  |||||| |||||| | || |||||||||||||||||||    
T  36449124 ctcgaat-aaaaacgataagcccactagacttcaagatcaaatcagaagggcacccc 36449069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 25160867 - 25160800
Alignment:
Q  117 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||| ||||||||||||||||||| ||||| |||||||||| ||| ||||||| || ||||||||||    
T  25160867 tgacttccgatctcgaatcaaaagtaatcggtccaccagactatagaaccaaattagcagggcacccc 25160800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 46262151 - 46262189
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46262151 ctcccgatctcgaatcaaaagtgatcggcccaccagact 46262189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 157
Target Start/End: Original strand, 17802851 - 17802885
Alignment:
Q  123 ccgatctcgaatcaaaagtgatcggcccaccagac 157  Q
    |||||||||||||||||||||||||||||||||||    
T  17802851 ccgatctcgaatcaaaagtgatcggcccaccagac 17802885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 27993568 - 27993606
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  27993568 ctcccgatctcgaatcaaaagtgatcggtccaccagact 27993606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 35206725 - 35206763
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  35206725 ctcccgatctcggatcaaaagtgatcggcccaccagact 35206763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 147
Target Start/End: Original strand, 44353585 - 44353623
Alignment:
Q  109 caaagaactgactcccgatctcgaatcaaaagtgatcgg 147  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  44353585 caaagaactgactcccgatctcaaatcaaaagtgatcgg 44353623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 70 - 184
Target Start/End: Original strand, 22568093 - 22568208
Alignment:
Q  70 ccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaa 168  Q
    |||||||||  | ||||||  ||||||||||| ||||| ||||| |||| |||||||||| ||||||||||| ||| | || |||| ||   | ||||||    
T  22568093 ccgaaagaacacctaaaaaatccaaaatcaaaacttgaaccaaaaaactaactcccgatcacgaatcaaaagcgattgacctaccaaaccacatgaccaa 22568192  T
Q  169 atcagaagggcacccc 184  Q
    |||||||| |||||||    
T  22568193 atcagaagagcacccc 22568208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 158
Target Start/End: Complemental strand, 25153265 - 25153231
Alignment:
Q  124 cgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||||| ||||||||||    
T  25153265 cgatctcgaatcaaaagtgatcggtccaccagact 25153231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 105; Significance: 1e-52; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 184
Target Start/End: Original strand, 42078 - 42234
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||| ||||||||||||||| || ||| |||| |||  || ||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||    
T  42078 aaaagattattcagcttccaccaactctcgacctccgatccactgaaagaaaccataaaaatcccaaaaccaaacttgagccaaagaactgacttccgat 42177  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  42178 ctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccc 42234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 28 - 184
Target Start/End: Complemental strand, 1269624 - 1269468
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||| ||||||||||||||| || ||| |||| |||  || ||||||||||||||||| ||||||| ||||||||| |||||||||||||| |||||    
T  1269624 aaaagattattcagcttccaccaactctcgacctccgatccactgaaagaaaccataaaaatcccaaaaccaaacttgagccaaagaactgacttccgat 1269525  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1269524 ctcgaatcaaaagtgatcggcccaccagactttaggactaaatcagaagggcacccc 1269468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 29 - 172
Target Start/End: Complemental strand, 34230341 - 34230198
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||||||||||||||||||| ||  |||| |||  |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||    
T  34230341 aaagatcattcagcttccaccacctctcaacctccgatccaccgaaagaaaccacaaaaagcccaaaatcaaacttgatccaaagaactgactcctgatc 34230242  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatca 172  Q
    |||||| |||| ||||||||||| || |||||| || |||||||    
T  34230241 tcgaataaaaaatgatcggcccatcaaactttacgatcaaatca 34230198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 37770583 - 37770737
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||||||||||||| ||||| ||| |||| |||  ||||||||||||||||||| |||||||| |||| |||||| |||||| ||||||| ||||    
T  37770583 aaagatcattcagcttccaacacctctcgacctccgattcaccgaaagaaaccataaaa-gcccaaaaccaaaattgatctaaagaattgactcctgatc 37770681  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
      |||||||||||||||||||||||| || |||||||||||||||| |||||||||    
T  37770682 cagaatcaaaagtgatcggcccaccaaaccttaggaccaaatcagatgggcacccc 37770737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 27 - 183
Target Start/End: Original strand, 10173516 - 10173673
Alignment:
Q  27 caaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccg 125  Q
    |||||||||||||| |||||||||||| ||| |||| |||  |||||||||| ||||  |||||||||||| ||||||||| ||||| |||| ||| |||    
T  10173516 caaaagatcattcaacttccaccacctctcgacctccgattcaccgaaagaacaccaacaaaagcccaaaaccaaacttgagccaaataacttacttccg 10173615  T
Q  126 atctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||||||||||||||||||||||| |||||||||||||||| || ||| ||||||    
T  10173616 atctcgaatcaaaagtgatcggcccactagactttaggaccaaaacaaaagagcaccc 10173673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 13337414 - 13337258
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    |||||||||||||  | |||||||| ||| ||||  ||  ||||||||||||||||||||| |||||| | |||||||  ||||||||||||| |||||     
T  13337414 aaagatcattcagtgttcaccacctctcgacctcctatccaccgaaagaaaccataaaaagtccaaaacctaacttgagtcaaagaactgacttccgatt 13337315  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccc 185  Q
    ||||||||||||||||||||||| ||||||||| |  ||||||||||||||||||||    
T  13337314 tcgaatcaaaagtgatcggcccatcagactttaaggtcaaatcagaagggcaccccc 13337258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 13 - 183
Target Start/End: Original strand, 41086722 - 41086883
Alignment:
Q  13 aaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaa 112  Q
    ||||| |||||| || ||||||||||||||||||||||||| ||| |||| |||  |||||||| ||||||||||||||||||| ||||||  |||||||    
T  41086722 aaaaagctcttatccgaaagatcattcagcttccaccacctctcgacctccgatccaccgaaaggaaccataaaaagcccaaaaccaaact--atccaaa 41086819  T
Q  113 gaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    || ||       |||||||||||||||||||| | ||||||||||| || |||||||||||||||||||||    
T  41086820 gagct-------gatctcgaatcaaaagtgattgacccaccagactatatgaccaaatcagaagggcaccc 41086883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 19 - 184
Target Start/End: Original strand, 14106451 - 14106620
Alignment:
Q  19 ctcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaaga----aaccataaaaagcccaaaatcaaacttgatccaaaga 114  Q
    ||||||||| || |||||| || ||||||| |||| ||| ||||||||  |||||||||    ||  | ||||| || |||| ||||  ||||| |||||    
T  14106451 ctcttaaccgaatgatcatacaacttccacaacctctcgacctctgatccaccgaaagagcacaaaaacaaaaacccaaaaaccaaaactgatctaaaga 14106550  T
Q  115 actgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  14106551 gctgactcccgatcttgaatcaaaagtgatcggcccaccagactttaggaccaaatcagcagggcacccc 14106620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 172
Target Start/End: Complemental strand, 14405282 - 14405195
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatca 172  Q
    |||||||||||| | ||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  14405282 aaaagcccaaaaaccaacttgagccaaagagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatca 14405195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 31 - 169
Target Start/End: Original strand, 22885076 - 22885214
Alignment:
Q  31 agatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatct 129  Q
    |||||| ||| |||||||||||| ||  |||||| |  |||||||||| |||| || || ||||||| ||||||||| ||||||||||||||||||||||    
T  22885076 agatcaatcaacttccaccacctctcaacctctggtccaccgaaagaacaccaaaacaa-cccaaaaccaaacttgaaccaaagaactgactcccgatct 22885174  T
Q  130 cgaatcaaaagtgatcggcccaccagactttaggaccaaa 169  Q
    |||||||||||||||||||||||||||||| |||| ||||    
T  22885175 cgaatcaaaagtgatcggcccaccagacttcaggatcaaa 22885214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 7874375 - 7874277
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    |||||||||||| | |||||||  |||||| ||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  7874375 aaaagcccaaaaaccaacttgagtcaaagagctgactcccgatctcgaatcaaaagtgatcgacccaccagactttagaaccaaatcagcagggcaccc 7874277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 87 - 166
Target Start/End: Complemental strand, 16960064 - 16959985
Alignment:
Q  87 aagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacc 166  Q
    |||||||||| ||||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||    
T  16960064 aagcccaaaaccaaacttgagccaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagactttaggacc 16959985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 39338863 - 39338961
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  |||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||| || ||||||||||    
T  39338863 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagactatagtaccaaattagcagggcacccc 39338961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 29 - 147
Target Start/End: Complemental strand, 7696102 - 7695985
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    |||||||||||||||||||||||||  || |||  |||  ||||||||||||| ||||| |||||||| | ||||||| |||||||||||||||||| |     
T  7696102 aaagatcattcagcttccaccacctcccgaccttcgatccaccgaaagaaaccgtaaaa-gcccaaaacctaacttgagccaaagaactgactcccggta 7696004  T
Q  129 tcgaatcaaaagtgatcgg 147  Q
    |||||||||||||||||||    
T  7696003 tcgaatcaaaagtgatcgg 7695985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 166
Target Start/End: Original strand, 15126391 - 15126488
Alignment:
Q  69 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacc 166  Q
    |||||||||| ||||||||| |||||||| ||||| ||| ||||||||| |||||||||||||||||||||| ||||||||||||||||||| ||||||    
T  15126391 accgaaagaacaccataaaa-gcccaaaaccaaacatgagccaaagaaccgactcccgatctcgaatcaaaaatgatcggcccaccagacttcaggacc 15126488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 29 - 157
Target Start/End: Complemental strand, 2063029 - 2062901
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    |||||||| |||| |||||| ||||  |  |||||| || |||||||||| |||| ||||||||||||| ||||||||| ||||||| ||||||||||||    
T  2063029 aaagatcaatcagtttccacaacctcacaacctctggtacaccgaaagaacacca-aaaaagcccaaaaccaaacttgagccaaagagctgactcccgat 2062931  T
Q  128 ctcgaatcaaaagtgatcggcccaccagac 157  Q
    |||||||||||||  |||||||||||||||    
T  2062930 ctcgaatcaaaagcaatcggcccaccagac 2062901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 86 - 179
Target Start/End: Complemental strand, 4472006 - 4471913
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggc 179  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||||||| | |||||||||||||||||  ||||||||| |||| ||||    
T  4472006 aaagcccaaaaacaaacttgaatcaaagaactgactcccgatctcgaatcaaaggcgatcggcccaccagactccaggaccaaaccagacgggc 4471913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 16952323 - 16952479
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||| || |||||||||||||| ||  |||| |||  |||||||||| |||| |||| | |||||| ||||||||| ||||||||||| ||||||||    
T  16952323 aaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgat 16952422  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||  |||||||  | ||| |||||||| ||| ||||||||| |||||    
T  16952423 ctcgaatcaaaaaagatcggcttagcagtctttaggaacaattcagaagggaacccc 16952479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 17022988 - 17023144
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||| || |||||||||||||| ||  |||| |||  |||||||||| |||| |||| | |||||| ||||||||| ||||||||||| ||||||||    
T  17022988 aaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgat 17023087  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||  |||||||  | ||| |||||||| ||| ||||||||| |||||    
T  17023088 ctcgaatcaaaaaagatcggcttagcagtctttaggaacaattcagaagggaacccc 17023144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 17060294 - 17060450
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||| || |||||||||||||| ||  |||| |||  |||||||||| |||| |||| | |||||| ||||||||| ||||||||||| ||||||||    
T  17060294 aaagatcgtttagcttccaccacctctcaacctccgatccaccgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgat 17060393  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||  |||||||  | ||| |||||||| ||| ||||||||| |||||    
T  17060394 ctcgaatcaaaaaagatcggcttagcagtctttaggaacaattcagaagggaacccc 17060450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 387257 - 387158
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||| ||||| | |||||||  ||||||| |||||||||||||| |||||||||||||| |||||||||||||||| ||||||| || ||||||||||    
T  387257 aaaagctcaaaaaccaacttgagtcaaagaattgactcccgatctcaaatcaaaagtgatcagcccaccagactttagtaccaaattagcagggcacccc 387158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 18681149 - 18681054
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggca 180  Q
    |||||||||||| ||||||||| ||| ||||||||||||||||||||||||||| |  |||||||||||| |||| |  |||||||||||||||||    
T  18681149 aaaagcccaaaaccaaacttgaaccagagaactgactcccgatctcgaatcaaatgcaatcggcccaccatacttcataaccaaatcagaagggca 18681054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 31 - 164
Target Start/End: Original strand, 33788575 - 33788708
Alignment:
Q  31 agatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatct 129  Q
    |||||| |||||||||||||||| ||  |||||| |  |||||||||| |||| || || ||||||  ||||| ||| ||||||||||||||||| ||||    
T  33788575 agatcaatcagcttccaccacctctcaacctctggttcaccgaaagaacaccaaaacaa-cccaaagccaaacctgaaccaaagaactgactcccaatct 33788673  T
Q  130 cgaatcaaaagtgatcggcccaccagactttagga 164  Q
    ||||||||||| |||||||||||||||||| ||||    
T  33788674 cgaatcaaaagcgatcggcccaccagacttcagga 33788708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 25504904 - 25505005
Alignment:
Q  84 aaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||||||| ||||| ||| || ||||||||||  | |||||||||| |||||||||    
T  25504904 aaaaagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacc 25505003  T
Q  183 cc 184  Q
    ||    
T  25505004 cc 25505005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 31902413 - 31902510
Alignment:
Q  87 aagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||| ||||| ||||||||| ||| ||||||||||||||||||||||| ||||| ||| |||||||||||||| || | ||||| |||||| ||||||    
T  31902413 aagctcaaaaccaaacttgaaccagagaactgactcccgatctcgaattaaaagcgattggcccaccagacttcagcatcaaataagaaggacacccc 31902510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 17079270 - 17079154
Alignment:
Q  69 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 167  Q
    |||||||||| |||| |||| | |||||| ||||||||| ||||||||||| ||||||||||||||||||||  |||||||  | ||| |||||||| ||    
T  17079270 accgaaagaacaccaaaaaatgtccaaaaccaaacttgagccaaagaactggctcccgatctcgaatcaaaaaagatcggcttagcagtctttaggaaca 17079171  T
Q  168 aatcagaagggcacccc 184  Q
    | ||||||||| |||||    
T  17079170 attcagaagggaacccc 17079154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 31 - 184
Target Start/End: Complemental strand, 27740113 - 27739960
Alignment:
Q  31 agatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatct 129  Q
    |||||| |||| ||||||||||| ||  |||||| |  |||||||||| |||| || || ||||| | ||||||||| || ||  |||||||| ||||||    
T  27740113 agatcaatcagtttccaccacctctcaacctctggtccaccgaaagaacaccaaaacaa-cccaagaccaaacttgaaccgaaacactgactctcgatct 27740015  T
Q  130 cgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
     |||||||||| |||||||||||||||||| ||||||||  |||| |||||||||    
T  27740014 tgaatcaaaagcgatcggcccaccagacttcaggaccaatccagatgggcacccc 27739960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 170
Target Start/End: Complemental strand, 10524149 - 10524096
Alignment:
Q  117 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 170  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| |||||||    
T  10524149 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaat 10524096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 85 - 162
Target Start/End: Complemental strand, 5254340 - 5254263
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttag 162  Q
    |||||||| ||| | ||||||| ||||||| | ||||||||||||| ||| ||||||||||||||||| |||||||||    
T  5254340 aaaagcccgaaaaccaacttgaaccaaagagcagactcccgatctcaaattaaaagtgatcggcccactagactttag 5254263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 23650444 - 23650384
Alignment:
Q  110 aaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 170  Q
    |||||| |||||||||||||||||||||||| |||| |||||||||||| ||| |||||||    
T  23650444 aaagaaatgactcccgatctcgaatcaaaagcgatcagcccaccagactctagaaccaaat 23650384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 158
Target Start/End: Original strand, 4162052 - 4162090
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||||||||||||||||||||    
T  4162052 ctcccgatctcgaatcaaaagtgatcggcccaccagact 4162090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 184
Target Start/End: Complemental strand, 17105470 - 17105396
Alignment:
Q  111 aagaactgactcccgatctcgaatcaaaa-gtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||| |||| || |||||||||||||||| |||||||||||| ||||||| || |||||||||| ||||||||||    
T  17105470 aagatctgattctcgatctcgaatcaaaaagtgatcggcccatcagacttcagtaccaaatcagtagggcacccc 17105396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 3745420 - 3745356
Alignment:
Q  84 aaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcgg 147  Q
    ||||||||||||| |||| ||| | |||||||||||||| |||||||||||| ||||| ||||||    
T  3745420 aaaaagcccaaaaacaaaacttaaaccaaagaactgacttccgatctcgaattaaaagcgatcgg 3745356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 160
Target Start/End: Original strand, 9560820 - 9560860
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagacttt 160  Q
    |||||||||||||||||||||||||||| |||||| |||||    
T  9560820 ctcccgatctcgaatcaaaagtgatcggtccaccaaacttt 9560860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 158
Target Start/End: Original strand, 23665439 - 23665474
Alignment:
Q  123 ccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||||||||||| |||||    
T  23665439 ccgatctcgaatcaaaagtgatcggcccactagact 23665474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 98 - 148
Target Start/End: Original strand, 27880139 - 27880189
Alignment:
Q  98 caaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggc 148  Q
    ||||||||| ||||| |||||||| |||||||||||||||||  |||||||    
T  27880139 caaacttgaaccaaataactgacttccgatctcgaatcaaaatcgatcggc 27880189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 83 - 159
Target Start/End: Original strand, 915447 - 915523
Alignment:
Q  83 taaaaagc-ccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactt 159  Q
    |||||||| |||||| |||||||||  |||| ||||||||  ||||||||||||||||| |||| |||||||| ||||    
T  915447 taaaaagctccaaaaccaaacttgaatcaaa-aactgactttcgatctcgaatcaaaagcgatcagcccaccatactt 915523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 117 - 158
Target Start/End: Original strand, 36276200 - 36276241
Alignment:
Q  117 tgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||||| || | ||||||||||||    
T  36276200 tgactcccgatctcgaatcaaaagcgaacagcccaccagact 36276241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 15710776 - 15710692
Alignment:
Q  100 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| | |||||||||| |  ||||||||||||||||||||| ||  |||||||| |  ||  | |||||||||||||||||    
T  15710776 aacttgaactaaagaactgattgacgatctcgaatcaaaagtgattggttcaccagacatctgggtctaatcagaagggcacccc 15710692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 34143079 - 34143123
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||| ||||||| ||| |||||||||||||| |||||||||    
T  34143079 aactgacttccgatctagaagcaaaagtgatcggctcaccagact 34143123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 105; Significance: 1e-52; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 29 - 185
Target Start/End: Complemental strand, 27102331 - 27102175
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||||||||||||||||||| ||| |||| |||  ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  27102331 aaagatcattcagcttccaccacctctcgacctccgatccaccgaaagaaaccgtaaaaagcccaaaaccaaacttgatccaaagaactgactcccgatc 27102232  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccc 185  Q
    ||||||||||||||||||||||   |||||||  ||||||| |||||||||||||||    
T  27102231 tcgaatcaaaagtgatcggcccgttagactttgagaccaaaacagaagggcaccccc 27102175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 6583157 - 6583312
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    |||||||| |||||||||||||||| ||| |||| |||  ||||||||||||||||||||||  |||| ||||  |||||||||||| ||||| ||||||    
T  6583157 aaagatcaatcagcttccaccacctctcgacctccgattcaccgaaagaaaccataaaaagcaaaaaaccaaaactgatccaaagaattgactgccgatc 6583256  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  6583257 tcgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaaaggcacccc 6583312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 84 - 185
Target Start/End: Complemental strand, 17033672 - 17033570
Alignment:
Q  84 aaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||||| |||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  17033672 aaaaagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgattcaaaagtgatcggcccaccagactataggaccaaatcagaagggcacc 17033573  T
Q  183 ccc 185  Q
    |||    
T  17033572 ccc 17033570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 33 - 182
Target Start/End: Complemental strand, 34775007 - 34774858
Alignment:
Q  33 atcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaa-ctgactcccgatctcg 131  Q
    |||| |||||||||||||||| ||  ||||  ||  ||||||||||||||||||||||||||||  |||||||| ||||| || ||||||||||||||||    
T  34775007 atcaatcagcttccaccacctctcaacctccaattcaccgaaagaaaccataaaaagcccaaaactaaacttgagccaaaaaaactgactcccgatctcg 34774908  T
Q  132 aatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    | |||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  34774907 a-tcaaaagtgatcggtccaccagacgttaggaccaaatcagaagggcacc 34774858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 44 - 184
Target Start/End: Original strand, 32864517 - 32864657
Alignment:
Q  44 tccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtga 143  Q
    ||||||||||  || ||||||||  ||  |||||||||||||||||||||||| |||||||||  |||||||| |||| |||||||||||| ||||||||    
T  32864517 tccaccacctcccgacctctgatccacaaaaagaaaccataaaaagcccaaaaccaaacttgagtcaaagaaccgacttccgatctcgaattaaaagtga 32864616  T
Q  144 tcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    | |||||||||| ||||||||||||||| ||||||||||||    
T  32864617 ttggcccaccagcctttaggaccaaatcggaagggcacccc 32864657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 41920535 - 41920437
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||| |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||    
T  41920535 aaagcccaaaatccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactgtagtaccaaattagcagggcacccc 41920437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 9313309 - 9313390
Alignment:
Q  108 ccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccccccacg 189  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||    
T  9313309 ccaaagaactgactcccgatctcgaatcaaaagtgatcagcccactagactttaggaccaaatcagaagggcacccctcacg 9313390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 19598736 - 19598621
Alignment:
Q  69 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 167  Q
    |||||||||| |||||||||| |||||||||||||||||  |||||||||||||| ||||||||||||||||| |||||||||||||||||| ||||||     
T  19598736 accgaaagaacaccataaaaa-cccaaaatcaaacttgagtcaaagaactgactctcgatctcgaatcaaaagcgatcggcccaccagacttcaggaccc 19598638  T
Q  168 aatcagaagggcacccc 184  Q
    || |||| |||||||||    
T  19598637 aaccagacgggcacccc 19598621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 46814464 - 46814563
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| |||| | ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  46814464 aaaagccaaaaaaccaacttgagccaaaaagctgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccc 46814563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 24659012 - 24658914
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | ||||| | ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||||||||||    
T  24659012 aaagcccaaaaaccaacttcagccaaagagctgactcccgatctcgaatcaaaagtgattggcccaccagactttagaaccaaatcagcagggcacccc 24658914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 31585758 - 31585856
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || ||||||||||    
T  31585758 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactatagtaccaaattagcagggcacccc 31585856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 29 - 178
Target Start/End: Complemental strand, 16147698 - 16147546
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaa--ccataaaaa-gcccaaaatcaaacttgatccaaagaactgactcccg 125  Q
    |||||||||||| ||| |||||||| ||  |||| ||| ||||||||||||  ||||||||| | |||||||||||||||| ||||||||||||||||||    
T  16147698 aaagatcattcaactttcaccacctctccacctccgatctaccgaaagaaataccataaaaaagtccaaaatcaaacttgacccaaagaactgactcccg 16147599  T
Q  126 atctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaaggg 178  Q
    || | ||||||||| | |||| ||||||| |||| | ||||||| ||||||||    
T  16147598 atattgaatcaaaattcatcgtcccaccatacttaacgaccaaaacagaaggg 16147546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 27031852 - 27031936
Alignment:
Q  100 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  27031852 aacttgagccaaagagctgactctcgatctcgaatcaaaagtgatcggcccactagactttagaaccaaatcagcagggcacccc 27031936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 86 - 182
Target Start/End: Original strand, 46692817 - 46692913
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||| | ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| ||  ||||||| || ||||||||    
T  46692817 aaagcccaaaaaccaacttgagccaaagaactaactcccgatctcgaatcaaaagtgatcggcccaccagactatatcaccaaattagcagggcacc 46692913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 117 - 184
Target Start/End: Complemental strand, 7857705 - 7857638
Alignment:
Q  117 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  7857705 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaatcagcagggcacccc 7857638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 38544749 - 38544828
Alignment:
Q  99 aaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaaggg 178  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  38544749 aaacttaaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg 38544828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 5389419 - 5389517
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||  |||||| ||| ||||||| ||  |||||||||    
T  5389419 aaagcccaaaaacaaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccttcagactatagtaccaaattagctgggcacccc 5389517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 30685902 - 30686000
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  |||||||||||||||||||||| ||||||||||||||||||||| ||||| ||| ||||||| || ||||||||||    
T  30685902 aaagcccaaaagccaacttgagtcaaagaactgactcccgatctcaaatcaaaagtgatcggcccacaagactatagtaccaaattagcagggcacccc 30686000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 24684475 - 24684602
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc- 183  Q
    |||||||||||| | |||| ||  ||||||||||||  |||||||||||| ||||||||||||||||||||||||||| | ||||| || |||||||||     
T  24684475 aaaagcccaaaaaccaactagagtcaaagaactgacatccgatctcgaattaaaagtgatcggcccaccagactttagaatcaaattagtagggcacccc 24684574  T
Q  184 ---cccacggtacaccagggaaaaccaa 208  Q
       ||| ||||||||||| |||||||||    
T  24684575 tcgcccccggtacaccagagaaaaccaa 24684602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 4651864 - 4651765
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||||||||| |||||| || ||| ||| ||||||||||||||||||||||||||||||||||| ||||||||  | || || ||||||||||||||    
T  4651864 aaaaagcccaaaaccaaactagaaccagaga-ctgactcccgatctcgaatcaaaagtgatcggccccccagacttcggaacaaattcagaagggcaccc 4651766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 33 - 153
Target Start/End: Original strand, 10785405 - 10785524
Alignment:
Q  33 atcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcga 132  Q
    |||||||||||||||||||||  || |||| ||   ||||||| ||| |||||||||||||||| ||||||||| ||||| |||||||||||||||||||    
T  10785405 atcattcagcttccaccacctcgcgacctccgaaccaccgaaa-aaatcataaaaagcccaaaaccaaacttgagccaaacaactgactcccgatctcga 10785503  T
Q  133 atcaaaagtgatcggcccacc 153  Q
    | ||||| | | |||||||||    
T  10785504 agcaaaattaaccggcccacc 10785524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 42374304 - 42374148
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgat 127  Q
    |||||||| |||||||||||||||| ||   ||| | ||| |||||||||  |  || |||||||||| |||| ||||| |||||  |||||||||||||    
T  42374304 aaagatcaatcagcttccaccacctctcaatctccggtatgccgaaagaacgccaaacaagcccaaaaccaaaacttgaaccaaaagactgactcccgat 42374205  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||| ||||||||| |||||| |||||||||   | ||||||||||||||||||||||    
T  42374204 ctcaaatcaaaagcgatcggtccaccagacaacatgaccaaatcagaagggcacccc 42374148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 5459244 - 5459146
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||   |||||||  |||| || |||||||||||||||||||||||||||||||||||||||||| ||| ||||||| || |||| |||||    
T  5459244 aaagcccaaaaatcaacttgaatcaaataattgactcccgatctcgaatcaaaagtgatcggcccaccagactatagcaccaaattagcagggtacccc 5459146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 50589206 - 50589303
Alignment:
Q  87 aagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||| ||||||||  ||||||||||| |||||||| |||||||||||| |||| ||||||| ||||| |||||| || |||| |||||||||    
T  50589206 aagcccaaaaccaaacttgggccaaagaactggctcccgatttcgaatcaaaagcgatcagcccaccggacttcaggacccaaccagacgggcacccc 50589303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 24449951 - 24450026
Alignment:
Q  109 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||| ||| ||| ||||||  || ||||||||||    
T  24449951 caaagaactgacttccgatctcaaatcaaaagtgatcggcccaccaaactatagtaccaaaatagcagggcacccc 24450026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 114 - 171
Target Start/End: Original strand, 15840938 - 15840995
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatc 171  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||| | ||||||    
T  15840938 aactgactcccgatctcgaatcaaaagtgatcagcccaccagactctagaaacaaatc 15840995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 90 - 180
Target Start/End: Complemental strand, 46603472 - 46603381
Alignment:
Q  90 cccaaaatcaaac-ttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggca 180  Q
    ||||||||||||  |||| ||||||||||||||| ||||||||||||||||| ||  |||||||||||||  | |||| |||||| ||||||    
T  46603472 cccaaaatcaaaaattgaaccaaagaactgactctcgatctcgaatcaaaagcgaatggcccaccagactacatgacctaatcaggagggca 46603381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 161
Target Start/End: Complemental strand, 27905493 - 27905420
Alignment:
Q  88 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagacttta 161  Q
    |||||||||  |||| |||  ||||||||| ||| | ||||||||||||||||||||||| |||||||||||||    
T  27905493 agcccaaaacaaaacatgaatcaaagaactaacttctgatctcgaatcaaaagtgatcggtccaccagacttta 27905420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 30655615 - 30655571
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||||||||||||||||||||||||| ||||||||||| |||||    
T  30655615 aactgactcccgatctcgaatcaaaagcgatcggcccactagact 30655571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 96
Target Start/End: Original strand, 31290960 - 31291027
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaa 96  Q
    ||||||||  || |||||||||||| ||| |||| |||  ||||||||||||||||||||||||||||    
T  31290960 aaagatcaagcaacttccaccacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaa 31291027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 9081506 - 9081563
Alignment:
Q  88 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcg 146  Q
    ||||||||| ||||||||| | |||| |||| |||||||||||||||||||||||||||    
T  9081506 agcccaaaagcaaacttga-ctaaagcactggctcccgatctcgaatcaaaagtgatcg 9081563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 158
Target Start/End: Complemental strand, 38564950 - 38564912
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||||||||||||||||||| ||||||||||| |||||    
T  38564950 ctcccgatctcgaatcaaaagcgatcggcccacgagact 38564912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 115 - 156
Target Start/End: Complemental strand, 42374090 - 42374049
Alignment:
Q  115 actgactcccgatctcgaatcaaaagtgatcggcccaccaga 156  Q
    ||||||||||||||||||||||||||| | ||| ||||||||    
T  42374090 actgactcccgatctcgaatcaaaagtaaccggtccaccaga 42374049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 33034672 - 33034716
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||||||  ||||||||||||| ||||||||| |||||||||||    
T  33034672 aactgactttcgatctcgaatcagaagtgatcgacccaccagact 33034716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 100; Significance: 1e-49; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 180
Target Start/End: Original strand, 14302371 - 14302522
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||| ||||||||||||||| ||| |||| |||  |||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||    
T  14302371 aaagatcatgcagcttccaccacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgctccaaagaactgactcccaatc 14302470  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggca 180  Q
    ||||| ||||||||||| | ||||||||||||||||||||| ||||||||||    
T  14302471 tcgaaccaaaagtgatcagtccaccagactttaggaccaaaacagaagggca 14302522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 28 - 177
Target Start/End: Original strand, 13954174 - 13954323
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||||| |||| ||||||||||| ||  | || |||  |||||||||||||||||||||||||||| ||||||||| |||||| | |||||||||||    
T  13954174 aaaagatcaatcagtttccaccacctttcaacttccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttgagccaaagtaatgactcccgat 13954273  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagg 177  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13954274 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagg 13954323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 26 - 184
Target Start/End: Original strand, 7195178 - 7195335
Alignment:
Q  26 ccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccg 125  Q
    ||||||||| ||||||||||||| |||| ||| |||| |||  ||||||| ||||||||||| ||||||| || ||||||| ||||||||||||||||||    
T  7195178 ccaaaagattattcagcttccacgacctctcgacctccgatccaccgaaaaaaaccataaaa-gcccaaactctaacttgagccaaagaactgactcccg 7195276  T
Q  126 atctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||    
T  7195277 atctcgaatcaaaagtgatcggctcaccagactttatggccaaatcagaagggcacccc 7195335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 8297608 - 8297453
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||| |||||| ||||||||||||  || |||| |||  ||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  8297608 aaagaccattcaacttccaccacctcacgacctccgattcaccgaaagaaaccataaaaagtccaaaaccaaacttgagccaaagaactgactcccgatc 8297509  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | ||  ||||||||  |||||| |||||||||||||||||||||    
T  8297508 tcgaatcaaaaattattagcccaccatgctttagaaccaaatcagaagggcacccc 8297453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 33 - 184
Target Start/End: Original strand, 33258827 - 33258978
Alignment:
Q  33 atcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcga 132  Q
    |||||||||||||||| | || ||| |||| |||  |||||||||||||||||||||||||||  ||| || || |||||||||| ||||| ||||||||    
T  33258827 atcattcagcttccactatctctcgacctccgatccaccgaaagaaaccataaaaagcccaaatccaacctcgaaccaaagaactaactcctgatctcga 33258926  T
Q  133 atcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||||||||||||| |||||| ||||||| ||||||    
T  33258927 atcaaaagtgatcggcccaccagactttagcaccaaaacagaaggacacccc 33258978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 30 - 184
Target Start/End: Original strand, 7391979 - 7392127
Alignment:
Q  30 aagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatct 129  Q
    ||||||| || ||||| ||||||| ||| |||| |||  ||||||||||||||||||| |||||||| |||   ||  ||||||||||||||||||||||    
T  7391979 aagatcaatccgcttcaaccacctctcgacctccgatccaccgaaagaaaccataaaa-gcccaaaaccaa---tg--ccaaagaactgactcccgatct 7392072  T
Q  130 cgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  7392073 cgaatcaaaagtgatcggtccaccagactttaggaccaaatcagaagggcacccc 7392127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 169
Target Start/End: Original strand, 26045905 - 26046045
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    |||||||| |||||||||||  |||| || |||| |||   |||| ||||||||||||||| |||||| ||||||||| |||||  ||| ||||||||||    
T  26045905 aaagatcaatcagcttccacagcctaacgacctccgatcccccgagagaaaccataaaaagtccaaaaccaaacttgagccaaaacactaactcccgatc 26046004  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaa 169  Q
    |||||||||||||||||||  ||||||||||||||||||||    
T  26046005 tcgaatcaaaagtgatcggttcaccagactttaggaccaaa 26046045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 29 - 181
Target Start/End: Complemental strand, 25992147 - 25991995
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    |||||||||| |||||||| || ||  || |||| |||  | ||||||||| |||||||||||||||| ||| || || | ||||||||||||| |||||    
T  25992147 aaagatcattaagcttccaacatctcacgacctccgatccatcgaaagaaatcataaaaagcccaaaaccaacctcgagctaaagaactgactctcgatc 25992048  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac 181  Q
    |||||||||||| ||| ||||||||||||||||| ||||||  ||||||||||    
T  25992047 tcgaatcaaaagcgattggcccaccagactttagcaccaaaatagaagggcac 25991995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 86 - 181
Target Start/End: Complemental strand, 34378181 - 34378086
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcac 181  Q
    ||||||||||| | ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||    
T  34378181 aaagcccaaaaaccaacttgtgtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagtaccaaattagcagggcac 34378086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 21402777 - 21402903
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||||| ||| |||||||||||| ||  ||||  ||  |||||||||||||||||||||| ||||| ||||| |||  |||||||||||||||||||    
T  21402777 aaaagatcaatcaacttccaccacctctcaacctccaatccaccgaaagaaaccataaaaagctcaaaaccaaacctgagtcaaagaactgactcccgat 21402876  T
Q  128 ctcgaatcaaaagtgatcggcccacca 154  Q
    ||||||  |||||||||||||||||||    
T  21402877 ctcgaactaaaagtgatcggcccacca 21402903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 184
Target Start/End: Original strand, 39184124 - 39184283
Alignment:
Q  27 caaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaa--cttgatccaaagaactgactcc 123  Q
    |||||||||| ||||||||||| ||||  |  |||||| |  |||||||||| |||| ||||||| ||||| ||||  ||||| |||||||||||||| |    
T  39184124 caaaagatcaatcagcttccactacctcacaacctctggtccaccgaaagaacacca-aaaaagctcaaaaccaaatgcttgaaccaaagaactgacttc 39184222  T
Q  124 cgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||||||||||||||||||||||||   | || |||||||||||||||||||    
T  39184223 cgatctcgaatcaaaagtgatcggcccaccagaccacatgatcaaatcagaagggcacccc 39184283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 100 - 184
Target Start/End: Original strand, 24072278 - 24072362
Alignment:
Q  100 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| |||||||||||||| |||||||| ||||||||| |||| ||| ||||||||||||||||||||||||||||||||||    
T  24072278 aacttgaaccaaagaactgacttccgatctcaaatcaaaagcgatcagccaaccagactttaggaccaaatcagaagggcacccc 24072362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 162
Target Start/End: Original strand, 22675322 - 22675398
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttag 162  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||||||  |||||| ||||||||||||||    
T  22675322 aaagcccaaaaccaaacttgagccaaagaactgactcccgatctcgaatcaaaatcgatcggtccaccagactttag 22675398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 27713153 - 27713058
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggca 180  Q
    |||||||||||| ||||||||| |||||||||||| |||||||||||||||||||  ||||||||||| |||||| |||||| || |||| |||||    
T  27713153 aaaagcccaaaaccaaacttgagccaaagaactgattcccgatctcgaatcaaaaacgatcggcccactagacttcaggacccaaccagacgggca 27713058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 90 - 183
Target Start/End: Original strand, 39024452 - 39024545
Alignment:
Q  90 cccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||| ||||||||| |||||||| |||||||||||||||||||||||| ||| |  |||||| |||| |||||||| ||||||||||||||    
T  39024452 cccaaaaccaaacttgaaccaaagaagtgactcccgatctcgaatcaaaagcgattgagccaccaaacttcaggaccaactcagaagggcaccc 39024545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 698444 - 698346
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  ||||||  |||||||||||||||||||||||| |||||| |||||||||| ||| ||||||| || ||||||||||    
T  698444 aaagcccaaaaaccaacttgagtcaaagagttgactcccgatctcgaatcaaaagagatcggtccaccagactatagcaccaaattagcagggcacccc 698346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 174
Target Start/End: Complemental strand, 23426425 - 23426339
Alignment:
Q  88 agcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcaga 174  Q
    ||||||||| |||| ||||| | |||||||||||||| ||||||||||||||||| |||| ||||||||||| ||||||||| ||||    
T  23426425 agcccaaaaccaaaattgattcgaagaactgactcccaatctcgaatcaaaagtgttcggtccaccagacttcaggaccaaaccaga 23426339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 90 - 184
Target Start/End: Complemental strand, 31721756 - 31721662
Alignment:
Q  90 cccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| ||||  ||| ||| ||||||||||||||||||||||||||||| ||||||||||  |||||| || |||| ||||||||||||||||    
T  31721756 cccaaaaccaaaaatgaaccagagaactgactcccgatctcgaatcaaaagcgatcggcccattagacttcagaaccacatcagaagggcacccc 31721662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 8731003 - 8730902
Alignment:
Q  84 aaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||||| |||| | ||| ||||||||||||||||||||||||||| ||||| ||| || ||||||||||  | |||||||||| |||||||||    
T  8731003 aaaaagcccaaaaccaaaacctgaaccaaagaactgactcccgatctcgaattaaaagcgataggtccaccagactgcaagaccaaatcataagggcacc 8730904  T
Q  183 cc 184  Q
    ||    
T  8730903 cc 8730902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 184
Target Start/End: Original strand, 17854066 - 17854163
Alignment:
Q  87 aagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||| |  ||||||| ||||| || |||||||||||||||| ||||||| | ||||||||||| |||| | |||||||| |||||||||||||    
T  17854066 aagcccaaagtagaacttgaaccaaataattgactcccgatctcgagtcaaaagcggtcggcccaccatacttcaagaccaaattagaagggcacccc 17854163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 87 - 180
Target Start/End: Complemental strand, 18593325 - 18593232
Alignment:
Q  87 aagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggca 180  Q
    |||||||||| | |||||||  ||||||||| ||||||||||||||||||||||||||| |||||| | ||| ||| ||||||| || ||||||    
T  18593325 aagcccaaaaaccaacttgagtcaaagaactaactcccgatctcgaatcaaaagtgatctgcccactaaactatagcaccaaattagcagggca 18593232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 85 - 169
Target Start/End: Complemental strand, 29087565 - 29087481
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaa 169  Q
    ||||||||| || | || ||||| ||||||||||||||| |||||||||||||||| |||| | |||||||||||||| ||||||    
T  29087565 aaaagcccagaaaccaatttgattcaaagaactgactcctgatctcgaatcaaaagggatcagtccaccagactttagaaccaaa 29087481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 159
Target Start/End: Complemental strand, 12046308 - 12046265
Alignment:
Q  116 ctgactcccgatctcgaatcaaaagtgatcggcccaccagactt 159  Q
    |||| |||||||||||||||||||||||||||||||||| ||||    
T  12046308 ctgagtcccgatctcgaatcaaaagtgatcggcccaccaaactt 12046265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 69 - 152
Target Start/End: Original strand, 25658132 - 25658217
Alignment:
Q  69 accgaaagaa-accataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccac 152  Q
    |||||||||| |||||||| |||||||||  ||| |||||   |||||||||||||||  ||| |||||||||| |||||||||||    
T  25658132 accgaaagaacaccataaatagcccaaaacaaaaacttgaattaaagaactgactcccagtctagaatcaaaagcgatcggcccac 25658217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 126 - 158
Target Start/End: Complemental strand, 25341741 - 25341709
Alignment:
Q  126 atctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||| |||||||||||||||||||||||||||    
T  25341741 atctcaaatcaaaagtgatcggcccaccagact 25341709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 100; Significance: 1e-49; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 14879576 - 14879421
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgat 127  Q
    |||||||||| |||||||||||||| ||| ||||  ||  ||||||||||||||||||||| |||||| |||| |||||||||| |||| ||||||||||    
T  14879576 aaagatcattaagcttccaccacctctcgacctcctatccaccgaaagaaaccataaaaagtccaaaaccaaaacttgatccaacgaacagactcccgat 14879477  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14879476 ctcgaatcaaaagtgatcggcccaccagactttaggacccaatcagaagggcaccc 14879421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 29 - 184
Target Start/End: Complemental strand, 37123521 - 37123367
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||| |||||||||||||||||||  ||| |||   | ||||||||||||||||||||||||| |||| |||||||||||||||||||||| |||    
T  37123521 aaagatcatacagcttccaccacctatcgaactccgatcctc-gaaagaaaccataaaaagcccaaaaccaaatttgatccaaagaactgactcccaatc 37123423  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||||||||| | |||||||||||| || |||||||||||    
T  37123422 tcgaatcaaaagtgatcggcccaccaaaatttaggaccaaaacataagggcacccc 37123367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 70 - 184
Target Start/End: Complemental strand, 14194041 - 14193925
Alignment:
Q  70 ccgaaagaaaccataaaaagcccaaaatcaaa--cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 167  Q
    ||||||||||||||||||||||||||| ||||  ||||| ||||||||| ||||||| |||||||||||||||||||||| || ||||||||||||||||    
T  14194041 ccgaaagaaaccataaaaagcccaaaaccaaaaacttgagccaaagaaccgactcccaatctcgaatcaaaagtgatcggtccgccagactttaggacca 14193942  T
Q  168 aatcagaagggcacccc 184  Q
    |||||||||||||||||    
T  14193941 aatcagaagggcacccc 14193925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 183
Target Start/End: Complemental strand, 25647853 - 25647670
Alignment:
Q  1 gagccacctccgaaaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaa 100  Q
    ||||||| ||||||||  ||| ||||| |||||||||||| ||| |||||||| ||| |||| |||  ||| ||||||||||||||||||| |||| |||    
T  25647853 gagccacgtccgaaaag-ctcataaccgaaagatcattcaactttcaccacctctcgacctccgatccaccaaaagaaaccataaaaagcctaaaaccaa 25647755  T
Q  101 a--cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    |  ||| | |||||||||  |||||||||||||||||||||||||| |||||  |||||||||||||||||||||||||||||||    
T  25647754 aaacttaagccaaagaaccaactcccgatctcgaatcaaaagtgataggcccgtcagactttaggaccaaatcagaagggcaccc 25647670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 33143891 - 33144020
Alignment:
Q  31 agatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatct 129  Q
    |||||| ||||||||||||||||  || ||||||||  |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||||||    
T  33143891 agatcaatcagcttccaccacctcgcgacctctgatccaccgaaagaaaccataaaaagcccaaaaactaatcttgatccaaagaactgactcccgatct 33143990  T
Q  130 cgaatcaaaagtgatcggcccaccagactt 159  Q
    |||||||||||||||||  |||||||||||    
T  33143991 cgaatcaaaagtgatcgatccaccagactt 33144020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 69 - 184
Target Start/End: Complemental strand, 47945806 - 47945691
Alignment:
Q  69 accgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggacca 167  Q
    |||||||||| ||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||     
T  47945806 accgaaagaacaccataaaa-gcccaaaatcaaacttgagccaaataactgactcccgatctcgaatcaaaagtgatcggcccaccggactttaggaccc 47945708  T
Q  168 aatcagaagggcacccc 184  Q
    || |||| |||||||||    
T  47945707 aaccagacgggcacccc 47945691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 85 - 183
Target Start/End: Complemental strand, 19176586 - 19176488
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    |||||||||||| | |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||||||||    
T  19176586 aaaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttagaaccaaattagcagggcaccc 19176488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 29 - 162
Target Start/End: Original strand, 14755205 - 14755339
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgat-ccaaagaactgactcccgat 127  Q
    |||||||||||| ||||||||| || ||| |||| |||  | |||||||||| ||||||||||||||  ||| || ||  ||||||||||||||||||||    
T  14755205 aaagatcattcaacttccaccatctctcgacctccgatccatcgaaagaaacaataaaaagcccaaatccaacctcgaaaccaaagaactgactcccgat 14755304  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttag 162  Q
    || ||||||||||||||||||||||||||||||||    
T  14755305 cttgaatcaaaagtgatcggcccaccagactttag 14755339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 84 - 177
Target Start/End: Original strand, 1652882 - 1652975
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagg 177  Q
    ||||||||||||| ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||| ||| || |||||||||||||||||    
T  1652882 aaaaagcccaaaaccaaacttgaaccaaagaactaactcctgatctcgaatcaaaagtgatcggcccacaagagttcaggaccaaatcagaagg 1652975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 28 - 154
Target Start/End: Original strand, 39021217 - 39021342
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||||| |||||| |||||| || ||| |||| |||  ||| |||||| | |||||| |||||||| || ||||||||||||||||||||||||||     
T  39021217 aaaagatcaatcagctaccaccatctctcgacctccgatccaccaaaagaatctataaaa-gcccaaaaccagacttgatccaaagaactgactcccgac 39021315  T
Q  128 ctcgaatcaaaagtgatcggcccacca 154  Q
    |||||||||||||||||||||||||||    
T  39021316 ctcgaatcaaaagtgatcggcccacca 39021342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 5556655 - 5556555
Alignment:
Q  85 aaaagcccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    |||||||||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||  | |||||||||| ||||||||||    
T  5556655 aaaagcccaaaaccaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatcgccccaccagactacaagaccaaatcaaaagggcaccc 5556556  T
Q  184 c 184  Q
    |    
T  5556555 c 5556555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 85 - 170
Target Start/End: Complemental strand, 43012459 - 43012374
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaat 170  Q
    |||||| ||||| | |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  43012459 aaaagctcaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcgggccaccagactttagaaccaaat 43012374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 28 - 151
Target Start/End: Original strand, 823374 - 823498
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccga 126  Q
    ||||||||||||||||||| |||||| ||  |||||| | ||||||||||| |||| || ||||||||||  ||||||||   ||| ||||||||| |||    
T  823374 aaaagatcattcagcttccgccacctctcaacctctggtctaccgaaagaacaccaaaataagcccaaaacaaaacttgaatgaaacaactgactctcga 823473  T
Q  127 tctcgaatcaaaagtgatcggccca 151  Q
    |||||||||||||||||||||||||    
T  823474 tctcgaatcaaaagtgatcggccca 823498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 86 - 158
Target Start/End: Complemental strand, 17551040 - 17550968
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||||||||| | |||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17551040 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 17550968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 14 - 183
Target Start/End: Original strand, 40023496 - 40023667
Alignment:
Q  14 aaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataa--aaagcccaaaatcaaacttgatccaa 111  Q
    |||| ||| ||||| || || ||| |||||||||| ||||  |||||||||||  |||||||||   || ||  ||||||||||| | ||||| | ||||    
T  40023496 aaaagctcctaaccgaatgaacatgcagcttccacaacctcccgtcctctgatccaccgaaagagcacaaaacaaaagcccaaaaaccaacttaagccaa 40023595  T
Q  112 agaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||  |||||||||||||||||||||||||||||| |||||||||||||  || ||||||| |||||||||    
T  40023596 agaatcgactcccgatctcgaatcaaaagtgatcggtccaccagactttaaaacaaaatcagcagggcaccc 40023667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 27399099 - 27398944
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||||||||||  ||||||||| ||  |||||| |  ||| |||||| |||| ||||||||||||| ||||||||| ||||| |||||||||| ||     
T  27399099 aaagatcattcagcaaccaccacctctcaacctctggtccaccaaaagaacaccaaaaaaagcccaaaaccaaacttgaaccaaataactgactcctgac 27399000  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    |||||||| |||| ||| |  |||||||||||| ||||||||  ||||||||||||    
T  27398999 ctcgaatctaaagcgattgtgccaccagactttcggaccaaaatagaagggcaccc 27398944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 85 - 183
Target Start/End: Original strand, 9584050 - 9584148
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    |||||||||||| | | |||||  ||||||||||||||||||||||||||||||||||||||  |||||||||||||| | ||||| || |||||||||    
T  9584050 aaaagcccaaaaaccatcttgagacaaagaactgactcccgatctcgaatcaaaagtgatcgatccaccagactttagtatcaaattagcagggcaccc 9584148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 30935386 - 30935486
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||| ||||| ||||||||| ||||| |||| ||||||||||| |||||||||| |||| |||||||| |||| |  ||||||||||||||||||||    
T  30935386 aaaaagctcaaaaccaaacttgaaccaaataactaactcccgatcttgaatcaaaagcgatcagcccaccaaacttcaaaaccaaatcagaagggcaccc 30935485  T
Q  184 c 184  Q
    |    
T  30935486 c 30935486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 85 - 184
Target Start/End: Original strand, 23328347 - 23328446
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||| ||||| | ||||||| ||||| | || ||||||||||||||||||||||||||||| |||||| ||||||| |||||||||  ||||||||||    
T  23328347 aaaagctcaaaaaccaacttgagccaaaaagctaactcccgatctcgaatcaaaagtgatcggtccaccaaactttagaaccaaatcaacagggcacccc 23328446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 85 - 184
Target Start/End: Complemental strand, 45398880 - 45398781
Alignment:
Q  85 aaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||| | ||||| |  |||||| ||||||| |||||||||||||||||||||||| |||||||||||||   ||||||||| ||||||||||    
T  45398880 aaaagcccaaaaaccaacttaaatcaaagagctgactctcgatctcgaatcaaaagtgatcggtccaccagactttaaatccaaatcagcagggcacccc 45398781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 117 - 184
Target Start/End: Original strand, 34475783 - 34475850
Alignment:
Q  117 tgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| | ||||| || ||||||||||    
T  34475783 tgactcccgatctcgaatcaaaagtgatcggcccaccagactatagaaacaaattagcagggcacccc 34475850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 184
Target Start/End: Original strand, 2392504 - 2392602
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | ||||| |  ||||||||||||| || |||||||||||||||||||||| ||||||| || ||| ||||||| || ||||||||||    
T  2392504 aaagcccaaaaaccaacttaagacaaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccc 2392602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 20611866 - 20611768
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | ||||| |  ||||||||||||||||||||||||||||||| ||||||||||| || ||| ||| || |||| || ||||||||||    
T  20611866 aaagcccaaaaaccaacttaagtcaaagaactgactcccgatctcgaatcaaaaatgatcggcccaacaaactatagtacgaaattagcagggcacccc 20611768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 84 - 184
Target Start/End: Original strand, 25594516 - 25594616
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||||||||  ||| ||||| |||||||| | ||| ||||||| |||||||||| ||||  |||||||||||| |||||||||  ||||||||||||    
T  25594516 aaaaagcccaaagccaatcttgaaccaaagaattaacttccgatctagaatcaaaagcgatctacccaccagacttgaggaccaaaatagaagggcaccc 25594615  T
Q  184 c 184  Q
    |    
T  25594616 c 25594616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 109 - 184
Target Start/End: Original strand, 2394274 - 2394349
Alignment:
Q  109 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||| || |||||||||||||||||||||| ||||||| || ||| ||||||| || ||||||||||    
T  2394274 caaagaactgacttccaatctcgaatcaaaagtgatcggtccaccaggctatagtaccaaattagcagggcacccc 2394349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 120 - 159
Target Start/End: Original strand, 20710740 - 20710779
Alignment:
Q  120 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 159  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  20710740 ctcccgatctcgaatcaaaagtgatcggcccaccagactt 20710779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 24099347 - 24099397
Alignment:
Q  108 ccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||| |||||| ||||||| ||||||||||||||||||||||||||||||    
T  24099347 ccaaaaaactgattcccgatatcgaatcaaaagtgatcggcccaccagact 24099397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 158
Target Start/End: Complemental strand, 30127319 - 30127273
Alignment:
Q  112 agaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||    
T  30127319 agaactgactcccgatctcgaatcaaaagcgatcggctcaccagact 30127273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 45163938 - 45163838
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcc--caccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||||||| | ||||| |  |||| |||||||| | |||||||||||||||||||||||||  ||| ||||| ||| ||||||| || |||||||||    
T  45163938 aaagcccaaaaaccaacttaagacaaaaaactgacttctgatctcgaatcaaaagtgatcggcccacacaagactatagtaccaaattagcagggcaccc 45163839  T
Q  184 c 184  Q
    |    
T  45163838 c 45163838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 121 - 184
Target Start/End: Complemental strand, 31482932 - 31482869
Alignment:
Q  121 tcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||||||||||||||| |||| ||||||| ||| ||||||| || |||| |||||    
T  31482932 tcccgatctcgaatcaaaagtgatccgcccgccagactatagaaccaaattagtagggtacccc 31482869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 95
Target Start/End: Original strand, 28937659 - 28937721
Alignment:
Q  33 atcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaa 95  Q
    |||||||||||||||||| || | | |||| |||  |||||||||||||||||||||||||||    
T  28937659 atcattcagcttccaccatctcttgacctccgatccaccgaaagaaaccataaaaagcccaaa 28937721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 31424296 - 31424247
Alignment:
Q  109 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||| |||||||||||||||||||||||||| || ||||| ||||||||    
T  31424296 caaagcactgactcccgatctcgaatcaaaagcgaccggcctaccagact 31424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 109 - 158
Target Start/End: Original strand, 2782090 - 2782139
Alignment:
Q  109 caaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||| ||||| ||||||||||  ||||||||||||||| |||||||||||    
T  2782090 caaaaaactggctcccgatctaaaatcaaaagtgatcgtcccaccagact 2782139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 19295891 - 19295935
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||| ||| ||||| |||||||||||||||| |||||||||||||    
T  19295891 aactaacttccgatatcgaatcaaaagtgataggcccaccagact 19295935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 3e-47; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 20701744 - 20701899
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    |||||||||||||||||||| |||| ||| |||| |||  |||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||||    
T  20701744 aaagatcattcagcttccactacctctcgacctccgatccaccgaaagaaaccataaaaagcccaaaaccaaacttaagccaaagaactaactcccgatc 20701843  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||| |||||| ||  | ||||||||||||||||||||||    
T  20701844 tcgaatcaaaagtgatcggcacaccagtctaaatgaccaaatcagaagggcacccc 20701899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 29 - 184
Target Start/End: Original strand, 32935280 - 32935435
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    ||||||||| |||||||||||||||  |  ||| |||   ||||||||||  |  |||||| ||||||||||||||||  | ||||||||||||||||||    
T  32935280 aaagatcatgcagcttccaccacctcccaacctttgaaccaccgaaagaacactaaaaaagtccaaaatcaaacttgagtccaagaactgactcccgatc 32935379  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||| |||||||||||||||||| |||||||||||||||||| |||||    
T  32935380 tcgaatcaaaagcgatcggcccaccagacttcaggaccaaatcagaagggaacccc 32935435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 26534712 - 26534813
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaaga---actgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggca 180  Q
    ||||||||||||| ||||||||| |||||||   |||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||    
T  26534712 aaaaagcccaaaaccaaacttgaaccaaagaagaactgactcccaatctcgaatcaaaagtgatcggcccaccagacttcaggaccaaatcagaaggcca 26534811  T
Q  181 cc 182  Q
    ||    
T  26534812 cc 26534813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 29 - 183
Target Start/End: Complemental strand, 9224182 - 9224027
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaa-accataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||||||||||||||||||||   |  |||| | |  |||||||||  ||||  |||||||||||| ||||  ||| ||||||||||||||||||||    
T  9224182 aaagatcattcagcttccaccaccgcacaacctccggtgcaccgaaagagcaccaataaaagcccaaaaccaaaactgaaccaaagaactgactcccgat 9224083  T
Q  128 ctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcaccc 183  Q
    ||||||||||||| |||| |||||||||||||||||||||| | | ||||||||||    
T  9224082 ctcgaatcaaaagcgatcagcccaccagactttaggaccaacttaaaagggcaccc 9224027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 84 - 182
Target Start/End: Original strand, 26216015 - 26216112
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||||| ||||  ||| || ||||||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||||||||||    
T  26216015 aaaaagcccaaaaccaaaactgaaccgaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagac-ttagaatcaaatcagaagggcacc 26216112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 13423607 - 13423482
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgat 127  Q
    ||||||||| ||||||||||||||||  || |||| | |  | |||||||||||||| |||||||| || ||||||||| ||||||||| ||||| ||||    
T  13423607 aaaagatcaatcagcttccaccacctcgcggcctccggtccatcgaaagaaaccatataaagcccataaccaaacttgagccaaagaaccgactctcgat 13423508  T
Q  128 ctcgaatcaaaagtgatcggcccacc 153  Q
    |||||||||||||||||||| |||||    
T  13423507 ctcgaatcaaaagtgatcggtccacc 13423482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 21266196 - 21266100
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||| ||||||||| ||| | |||| |||||||||||||||||||||| |||||||||||||| |||||||||||||||| |||| ||||    
T  21266196 aaagcccaaaaccaaacttgaaccacataactaactcccgatctcgaatcaaaagcgatcggcccaccagtctttaggaccaaatcataaggccacc 21266100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 29 - 182
Target Start/End: Original strand, 3880539 - 3880677
Alignment:
Q  29 aaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaactgactcccgatc 128  Q
    |||||| ||||| |||||||||||  ||| |||| |||  || ||||||||||||||||| | ||||| |||||||||||||||               |    
T  3880539 aaagattattcaacttccaccaccactcgacctccgatccacggaaagaaaccataaaaatctcaaaaccaaacttgatccaaa---------------c 3880623  T
Q  129 tcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  3880624 tcgaatcaaaagtgatcggcccaccaaactttaggaccaaatcagaagggcacc 3880677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 86 - 184
Target Start/End: Complemental strand, 3117576 - 3117478
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| | |||||||  ||||||||||||||||||||| |||||||||||||||||||||||| ||| ||  | ||||| || ||||||||||    
T  3117576 aaagcccaaaaaccaacttgagtcaaagaactgactcccgatcttgaatcaaaagtgatcggcccaccatactatatcaacaaattagcagggcacccc 3117478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 110 - 184
Target Start/End: Original strand, 16510323 - 16510397
Alignment:
Q  110 aaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||||| | ||||||||||||||||||||||||||| ||||||||| ||||||| || ||||||||||    
T  16510323 aaagaactgactctcaatctcgaatcaaaagtgatcggcccactagactttagaaccaaattagcagggcacccc 16510397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 84 - 184
Target Start/End: Complemental strand, 12794200 - 12794099
Alignment:
Q  84 aaaaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaag-tgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    |||||||| ||||  |||||||  || ||||||||||||| |||||||||||||||| |||||||||||| ||||||||| |||||| ||||||| ||||    
T  12794200 aaaaagccaaaaactaaacttggacccaagaactgactcctgatctcgaatcaaaagttgatcggcccactagactttagaaccaaaacagaaggacacc 12794101  T
Q  183 cc 184  Q
    ||    
T  12794100 cc 12794099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 86 - 182
Target Start/End: Complemental strand, 21265069 - 21264973
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    ||||||||||| ||||||||| ||| | |||| ||||||||||||||||||||||  |||||||||| || ||| |||||||||||| |||| ||||    
T  21265069 aaagcccaaaaccaaacttgaaccagataactaactcccgatctcgaatcaaaagctatcggcccactagtcttcaggaccaaatcataaggccacc 21264973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 91 - 184
Target Start/End: Original strand, 33968615 - 33968709
Alignment:
Q  91 ccaaaatcaaa-cttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||||  ||||| |||||  |  |||||||||||||| ||||||    
T  33968615 ccaaaatcaaaacttgaaccaaagaactgactcccgatctcgaatcaaaagcgatctacccactagactacataaccaaatcagaaggccacccc 33968709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 28 - 115
Target Start/End: Original strand, 15120537 - 15120624
Alignment:
Q  28 aaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaagaa 115  Q
    |||||||||  ||||||||||||||| ||| |||| |||  ||| ||||||||||||||||||||||||  |||||||| ||||||||    
T  15120537 aaaagatcaaccagcttccaccacctctcgacctccgatccaccaaaagaaaccataaaaagcccaaaactaaacttgagccaaagaa 15120624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 172
Target Start/End: Complemental strand, 34105468 - 34105410
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatca 172  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||||    
T  34105468 aactgactcccgatctcgaatcaaaagtgatcggcccaccaaactctagaaacaaatca 34105410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 34090418 - 34090374
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||||||| |||||| |||||||||||    
T  34090418 aactgactcccgatctcgaatcaaaattgatcgacccaccagact 34090374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 168
Target Start/End: Complemental strand, 15944116 - 15944020
Alignment:
Q  73 aaagaaaccataaaaagcccaaaat-caaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaa 168  Q
    ||||||| | ||||||||||||||  |||  |||| |||| ||||||||||| || ||| ||||||||||||||||| ||||| |||| | ||||||    
T  15944116 aaagaaaacctaaaaagcccaaaaaacaagattgaaccaaggaactgactccagaactctaatcaaaagtgatcggctcaccaaacttcaagaccaa 15944020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 34092866 - 34092806
Alignment:
Q  98 caaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||  |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  34092866 caaacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagact 34092806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 123 - 158
Target Start/End: Original strand, 7546464 - 7546499
Alignment:
Q  123 ccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||||||||||||||||||||||| ||||||||||    
T  7546464 ccgatctcgaatcaaaagtgatcggtccaccagact 7546499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 99 - 144
Target Start/End: Complemental strand, 32316438 - 32316393
Alignment:
Q  99 aaacttgatccaaagaactgactcccgatctcgaatcaaaagtgat 144  Q
    ||||||||  ||||||||| ||| ||||||||||||||||||||||    
T  32316438 aaacttgaatcaaagaacttactaccgatctcgaatcaaaagtgat 32316393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 158
Target Start/End: Complemental strand, 12129264 - 12129228
Alignment:
Q  122 cccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||||||| ||| ||||||    
T  12129264 cccgatctcgaatcaaaagtgatcggaccatcagact 12129228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 182
Target Start/End: Complemental strand, 58282 - 58114
Alignment:
Q  14 aaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaacttgatccaaag 113  Q
    |||| |||||| || |||||| |||||||||||| || || ||| |||| |||  ||||||||||||||||||||||| |||| |||||||||||||||     
T  58282 aaaagctcttatccgaaagataattcagcttccatcatctctcgacctccgatccaccgaaagaaaccataaaaagcctaaaaccaaacttgatccaaac 58183  T
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacc 182  Q
    || ||||| ||||||| |||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  58182 aattgacttccgatcttgaatcaaaagtgatcggcccaccaaactttaggaccaaatctgaagggcacc 58114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 36864 - 36692
Alignment:
Q  14 aaaaactcttaaccaaaagatcattcagcttccaccacctatcgtcctctgatataccgaaagaaaccataaaaagcccaaaatcaaac--ttgatccaa 111  Q
    |||| ||| ||||| ||||| |||||| |||||||||| | ||| |||| |||  ||||||||||| ||||||||| |||||| ||||   ||||  |||    
T  36864 aaaagctcctaaccgaaagaccattcaacttccaccacatctcgacctccgatccaccgaaagaaatcataaaaagaccaaaaccaaaaagttgagacaa 36765  T
Q  112 agaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||    
T  36764 agaactgactcccgatctcgaatcaaaagtgatcagcccgccagactttaggaccaaatcagaagggcacccc 36692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1613 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 99 - 178
Target Start/End: Original strand, 1028 - 1107
Alignment:
Q  99 aaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaaggg 178  Q
    |||||| | ||||||||||||||||||||||||||||||||| |||||||||||||||||| | ||||||||||||||||    
T  1028 aaacttaaaccaaagaactgactcccgatctcgaatcaaaagcgatcggcccaccagacttcatgaccaaatcagaaggg 1107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0620
Description:

Target: scaffold0620; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 158
Target Start/End: Complemental strand, 3885 - 3841
Alignment:
Q  114 aactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||||||||||||||||||| ||||||||||||||||||    
T  3885 aactgactcccgatctcgaatcaaaattgatcggcccaccagact 3841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0620; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 8200 - 8140
Alignment:
Q  98 caaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    |||||||||  |||||||  |||| || ||||||||||||||||||||||| |||||||||    
T  8200 caaacttgaatcaaagaatagacttcctatctcgaatcaaaagtgatcggctcaccagact 8140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 86 - 158
Target Start/End: Original strand, 35770 - 35841
Alignment:
Q  86 aaagcccaaaatcaaacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagact 158  Q
    ||||||||||| | ||||| |  ||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  35770 aaagcccaaaaaccaacttaagtcaaagaa-tgactcccgatctcgaatcaaaagtgatcggcccactagact 35841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 47162 - 47078
Alignment:
Q  100 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| | |||||||||| |  ||||||||||||||||||||| ||  |||||||| | |||  | |||||||||||||||||    
T  47162 aacttgaactaaagaactgatttacgatctcgaatcaaaagtgattggttcaccagacatcagggtctaatcagaagggcacccc 47078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 184
Target Start/End: Complemental strand, 59688 - 59604
Alignment:
Q  100 aacttgatccaaagaactgactcccgatctcgaatcaaaagtgatcggcccaccagactttaggaccaaatcagaagggcacccc 184  Q
    ||||||| | |||||||||| |  ||||||||||||||||||||| ||  |||||||| |  ||  | |||||||||||||||||    
T  59688 aacttgaactaaagaactgattgacgatctcgaatcaaaagtgattggttcaccagacatctgggtctaatcagaagggcacccc 59604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University