View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6719_low_5 (Length: 390)

Name: NF6719_low_5
Description: NF6719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6719_low_5
NF6719_low_5
[»] chr2 (54 HSPs)
chr2 (8-390)||(36043731-36044113)
chr2 (8-109)||(36044175-36044276)
chr2 (127-278)||(750610-750760)
chr2 (135-278)||(3611165-3611308)
chr2 (127-238)||(18066107-18066218)
chr2 (127-238)||(26626852-26626963)
chr2 (129-238)||(40279176-40279285)
chr2 (127-263)||(43570368-43570503)
chr2 (127-238)||(1625879-1625990)
chr2 (130-237)||(680483-680589)
chr2 (135-218)||(9174814-9174897)
chr2 (129-264)||(9395083-9395218)
chr2 (196-278)||(13866828-13866910)
chr2 (127-217)||(16451118-16451208)
chr2 (135-253)||(36114383-36114501)
chr2 (127-200)||(4606942-4607015)
chr2 (127-275)||(26143620-26143769)
chr2 (127-236)||(33941890-33941998)
chr2 (129-210)||(40279274-40279355)
chr2 (129-210)||(40279344-40279425)
chr2 (177-273)||(656807-656903)
chr2 (152-236)||(22681190-22681274)
chr2 (130-238)||(41851514-41851622)
chr2 (130-278)||(42457887-42458035)
chr2 (127-238)||(8017413-8017523)
chr2 (142-253)||(12464468-12464579)
chr2 (202-264)||(42592292-42592354)
chr2 (130-232)||(42817360-42817461)
chr2 (152-238)||(43911004-43911090)
chr2 (130-235)||(28039316-28039420)
chr2 (129-210)||(35378999-35379079)
chr2 (127-232)||(40158703-40158807)
chr2 (177-274)||(41875683-41875780)
chr2 (152-238)||(42907338-42907426)
chr2 (125-202)||(43036572-43036648)
chr2 (130-274)||(12313157-12313299)
chr2 (100-168)||(18178998-18179066)
chr2 (156-264)||(41241141-41241249)
chr2 (177-232)||(9556224-9556279)
chr2 (135-238)||(29316764-29316866)
chr2 (127-234)||(35378513-35378619)
chr2 (202-236)||(1899922-1899956)
chr2 (196-278)||(18962087-18962169)
chr2 (127-184)||(2142687-2142744)
chr2 (205-278)||(2416252-2416325)
chr2 (200-253)||(11863703-11863756)
chr2 (191-236)||(25800810-25800855)
chr2 (157-238)||(33319822-33319903)
chr2 (217-278)||(34339062-34339123)
chr2 (127-264)||(45229465-45229601)
chr2 (202-278)||(1646953-1647029)
chr2 (150-234)||(29628746-29628830)
chr2 (136-200)||(41809235-41809298)
chr2 (133-169)||(44600583-44600619)
[»] chr5 (46 HSPs)
chr5 (130-278)||(39105403-39105551)
chr5 (131-278)||(12425510-12425657)
chr5 (125-278)||(9202726-9202879)
chr5 (127-278)||(7674587-7674737)
chr5 (127-273)||(10639897-10640043)
chr5 (196-273)||(15246777-15246854)
chr5 (129-235)||(40119850-40119956)
chr5 (152-277)||(4014429-4014554)
chr5 (127-238)||(2568636-2568747)
chr5 (158-253)||(10272442-10272537)
chr5 (127-260)||(16457959-16458091)
chr5 (131-278)||(12459986-12460131)
chr5 (180-231)||(26005030-26005081)
chr5 (148-238)||(7319385-7319475)
chr5 (200-246)||(34590081-34590127)
chr5 (202-240)||(37914730-37914768)
chr5 (127-168)||(7853689-7853730)
chr5 (180-249)||(12975315-12975384)
chr5 (127-232)||(17368661-17368765)
chr5 (130-236)||(18857382-18857489)
chr5 (147-232)||(28776978-28777063)
chr5 (152-237)||(32372871-32372956)
chr5 (129-210)||(37611198-37611278)
chr5 (129-210)||(37787928-37788008)
chr5 (196-240)||(5559702-5559746)
chr5 (129-221)||(7984965-7985057)
chr5 (191-280)||(18637064-18637155)
chr5 (189-237)||(34736569-34736617)
chr5 (159-278)||(6593239-6593357)
chr5 (127-230)||(7907868-7907971)
chr5 (181-276)||(14932231-14932325)
chr5 (205-264)||(42569038-42569097)
chr5 (128-238)||(1619069-1619177)
chr5 (153-235)||(6587113-6587195)
chr5 (127-217)||(7318988-7319078)
chr5 (196-278)||(32172592-32172674)
chr5 (130-184)||(32859703-32859756)
chr5 (130-184)||(32861875-32861928)
chr5 (156-221)||(18906338-18906403)
chr5 (130-163)||(32862659-32862692)
chr5 (153-238)||(36796712-36796797)
chr5 (135-236)||(40159800-40159899)
chr5 (177-253)||(36639486-36639562)
chr5 (129-173)||(37794681-37794724)
chr5 (137-185)||(42099862-42099910)
chr5 (178-250)||(42646882-42646954)
[»] chr8 (34 HSPs)
chr8 (127-278)||(10114429-10114579)
chr8 (133-238)||(27028810-27028915)
chr8 (127-238)||(10120735-10120846)
chr8 (215-278)||(14280469-14280532)
chr8 (177-270)||(29168922-29169015)
chr8 (153-253)||(21653045-21653145)
chr8 (127-235)||(43504733-43504840)
chr8 (202-264)||(35374428-35374490)
chr8 (156-278)||(38874585-38874707)
chr8 (181-278)||(38036146-38036243)
chr8 (127-183)||(32840966-32841022)
chr8 (127-217)||(1930035-1930125)
chr8 (133-194)||(1113081-1113142)
chr8 (147-264)||(27049321-27049436)
chr8 (196-277)||(31884534-31884615)
chr8 (127-232)||(42215287-42215391)
chr8 (130-278)||(7646145-7646292)
chr8 (154-278)||(37353256-37353379)
chr8 (152-236)||(42215087-42215170)
chr8 (155-223)||(43717945-43718013)
chr8 (191-278)||(3936788-3936875)
chr8 (127-232)||(2482850-2482952)
chr8 (214-264)||(3537098-3537148)
chr8 (162-236)||(7645959-7646033)
chr8 (152-214)||(20672753-20672815)
chr8 (127-185)||(33808335-33808393)
chr8 (157-278)||(4558737-4558858)
chr8 (133-166)||(8407689-8407722)
chr8 (189-238)||(24558832-24558881)
chr8 (177-238)||(31804484-31804545)
chr8 (202-238)||(8909029-8909065)
chr8 (125-233)||(12851160-12851267)
chr8 (127-271)||(29205754-29205897)
chr8 (130-170)||(40902187-40902227)
[»] chr3 (44 HSPs)
chr3 (127-238)||(21367646-21367757)
chr3 (131-278)||(402526-402672)
chr3 (128-238)||(37795575-37795684)
chr3 (129-252)||(21574456-21574577)
chr3 (127-238)||(45264346-45264457)
chr3 (191-271)||(25447288-25447368)
chr3 (127-238)||(46778171-46778281)
chr3 (147-235)||(20170708-20170796)
chr3 (131-238)||(20880455-20880562)
chr3 (152-270)||(33405171-33405290)
chr3 (127-238)||(45541550-45541660)
chr3 (136-274)||(3044249-3044386)
chr3 (130-232)||(25453842-25453944)
chr3 (127-236)||(2719450-2719558)
chr3 (155-275)||(44061032-44061151)
chr3 (133-184)||(3194250-3194301)
chr3 (125-238)||(41724190-41724303)
chr3 (180-282)||(48364912-48365014)
chr3 (155-264)||(32095199-32095308)
chr3 (125-238)||(52618982-52619094)
chr3 (127-240)||(53789441-53789554)
chr3 (127-278)||(30573895-30574043)
chr3 (180-264)||(30956659-30956743)
chr3 (180-264)||(30972471-30972555)
chr3 (125-173)||(39723379-39723426)
chr3 (202-277)||(1395611-1395686)
chr3 (189-232)||(2201113-2201156)
chr3 (127-230)||(18405811-18405914)
chr3 (147-278)||(26878056-26878187)
chr3 (129-252)||(30443858-30443981)
chr3 (127-238)||(34610786-34610897)
chr3 (152-278)||(36783339-36783466)
chr3 (131-253)||(1816547-1816668)
chr3 (217-278)||(34638034-34638096)
chr3 (127-173)||(37389227-37389273)
chr3 (196-278)||(38462220-38462302)
chr3 (152-217)||(20669172-20669237)
chr3 (152-225)||(40240791-40240864)
chr3 (196-260)||(12862297-12862360)
chr3 (202-278)||(21661453-21661529)
chr3 (152-232)||(24785190-24785270)
chr3 (154-238)||(28622006-28622090)
chr3 (152-236)||(40665410-40665494)
chr3 (127-223)||(50600159-50600254)
[»] chr1 (42 HSPs)
chr1 (130-272)||(24915034-24915176)
chr1 (127-278)||(3887612-3887763)
chr1 (127-277)||(1432455-1432605)
chr1 (127-253)||(31517721-31517846)
chr1 (127-264)||(51695475-51695611)
chr1 (127-277)||(37842336-37842485)
chr1 (178-278)||(23544670-23544771)
chr1 (140-240)||(7069278-7069378)
chr1 (142-237)||(27820332-27820427)
chr1 (136-278)||(836328-836470)
chr1 (148-278)||(45975629-45975759)
chr1 (162-279)||(7472250-7472366)
chr1 (127-235)||(2777874-2777981)
chr1 (125-236)||(33723361-33723471)
chr1 (156-230)||(4622080-4622154)
chr1 (154-264)||(9656603-9656713)
chr1 (156-278)||(44032008-44032130)
chr1 (128-173)||(4699597-4699641)
chr1 (217-278)||(7028231-7028292)
chr1 (127-273)||(28689433-28689580)
chr1 (154-225)||(34290228-34290299)
chr1 (127-202)||(38503445-38503520)
chr1 (206-273)||(49365818-49365885)
chr1 (189-278)||(3069976-3070066)
chr1 (127-173)||(4481974-4482019)
chr1 (202-264)||(9572163-9572225)
chr1 (129-187)||(11639399-11639456)
chr1 (204-278)||(36151562-36151636)
chr1 (125-187)||(37593663-37593724)
chr1 (127-185)||(47498819-47498877)
chr1 (149-238)||(2294890-2294979)
chr1 (127-168)||(27146235-27146276)
chr1 (200-265)||(29128351-29128416)
chr1 (125-238)||(38018342-38018455)
chr1 (177-278)||(49888706-49888807)
chr1 (133-173)||(489034-489074)
chr1 (125-161)||(489246-489282)
chr1 (196-236)||(6279380-6279420)
chr1 (147-264)||(15687346-15687465)
chr1 (127-279)||(27145716-27145867)
chr1 (196-264)||(49517023-49517091)
chr1 (27-63)||(51985893-51985928)
[»] chr6 (28 HSPs)
chr6 (129-278)||(9093538-9093687)
chr6 (127-278)||(9559519-9559672)
chr6 (202-278)||(29274284-29274360)
chr6 (127-262)||(2735024-2735159)
chr6 (129-232)||(28641732-28641834)
chr6 (127-264)||(769092-769227)
chr6 (202-281)||(20671920-20671999)
chr6 (127-222)||(31624085-31624179)
chr6 (127-185)||(9912171-9912229)
chr6 (194-278)||(12631551-12631632)
chr6 (127-184)||(1575928-1575984)
chr6 (148-225)||(9109252-9109329)
chr6 (177-274)||(28621140-28621237)
chr6 (125-173)||(696486-696533)
chr6 (177-253)||(837246-837322)
chr6 (127-235)||(20368161-20368268)
chr6 (129-217)||(32386089-32386176)
chr6 (163-234)||(28088238-28088309)
chr6 (152-238)||(415283-415369)
chr6 (130-168)||(9559405-9559443)
chr6 (196-246)||(11784079-11784129)
chr6 (196-278)||(24476541-24476623)
chr6 (180-278)||(33787778-33787876)
chr6 (205-258)||(3785758-3785811)
chr6 (129-190)||(8183172-8183232)
chr6 (127-216)||(33089507-33089595)
chr6 (196-264)||(1402949-1403017)
chr6 (127-183)||(33832254-33832309)
[»] chr7 (35 HSPs)
chr7 (127-259)||(33678738-33678870)
chr7 (129-236)||(12110341-12110447)
chr7 (154-264)||(40688993-40689103)
chr7 (127-259)||(39967878-39968010)
chr7 (127-263)||(30535517-30535652)
chr7 (180-236)||(30812129-30812185)
chr7 (152-278)||(28165030-28165156)
chr7 (152-238)||(39907782-39907868)
chr7 (202-267)||(48507671-48507737)
chr7 (127-260)||(20526403-20526536)
chr7 (127-264)||(48469997-48470134)
chr7 (152-236)||(38010695-38010779)
chr7 (178-237)||(18350738-18350797)
chr7 (157-264)||(22283754-22283860)
chr7 (205-264)||(30180004-30180063)
chr7 (202-264)||(34083580-34083642)
chr7 (127-184)||(15740392-15740448)
chr7 (125-173)||(11047911-11047958)
chr7 (125-173)||(43219783-43219830)
chr7 (177-253)||(46104332-46104408)
chr7 (166-238)||(47177615-47177687)
chr7 (125-168)||(7241314-7241357)
chr7 (125-232)||(25670565-25670671)
chr7 (125-168)||(44989655-44989698)
chr7 (196-278)||(1417203-1417285)
chr7 (179-253)||(46825062-46825136)
chr7 (157-230)||(752956-753029)
chr7 (130-219)||(11619141-11619230)
chr7 (127-260)||(30570911-30571044)
chr7 (129-222)||(33645944-33646035)
chr7 (127-168)||(34035966-34036007)
chr7 (202-275)||(37832195-37832267)
chr7 (202-278)||(47795896-47795970)
chr7 (127-163)||(25635555-25635591)
chr7 (214-278)||(30496643-30496707)
[»] chr4 (36 HSPs)
chr4 (125-277)||(3155543-3155695)
chr4 (131-253)||(52746825-52746946)
chr4 (130-235)||(1706604-1706709)
chr4 (156-278)||(30338600-30338723)
chr4 (152-264)||(17884021-17884133)
chr4 (314-386)||(20109817-20109889)
chr4 (134-264)||(1407909-1408040)
chr4 (136-246)||(20031720-20031831)
chr4 (202-264)||(47946151-47946213)
chr4 (213-278)||(26520295-26520360)
chr4 (125-278)||(44138498-44138651)
chr4 (202-278)||(25885798-25885874)
chr4 (130-238)||(28300283-28300390)
chr4 (202-278)||(45128365-45128441)
chr4 (129-236)||(2996554-2996660)
chr4 (189-236)||(19395158-19395205)
chr4 (128-277)||(49803151-49803297)
chr4 (202-270)||(23459575-23459643)
chr4 (133-253)||(55414406-55414526)
chr4 (135-234)||(35571619-35571718)
chr4 (153-260)||(51630068-51630175)
chr4 (130-236)||(7839344-7839450)
chr4 (152-234)||(30066771-30066853)
chr4 (213-278)||(49004038-49004101)
chr4 (148-278)||(49202584-49202714)
chr4 (127-173)||(49939931-49939977)
chr4 (129-170)||(1965988-1966028)
chr4 (203-236)||(20907328-20907361)
chr4 (203-264)||(28232498-28232559)
chr4 (127-264)||(47118946-47119082)
chr4 (189-234)||(49940033-49940078)
chr4 (177-238)||(50298506-50298567)
chr4 (156-217)||(53673667-53673728)
chr4 (177-238)||(56480327-56480388)
chr4 (127-210)||(2703033-2703117)
chr4 (152-232)||(7694015-7694095)
[»] scaffold0044 (1 HSPs)
scaffold0044 (182-236)||(51985-52039)
[»] scaffold0608 (1 HSPs)
scaffold0608 (127-173)||(9618-9663)
[»] scaffold0024 (1 HSPs)
scaffold0024 (217-278)||(21348-21409)


Alignment Details
Target: chr2 (Bit Score: 343; Significance: 0; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 343; E-Value: 0
Query Start/End: Original strand, 8 - 390
Target Start/End: Complemental strand, 36044113 - 36043731
Alignment:
Q  8 atgaacacagttaaaataataaaagtgattttttggttaaaagaaatagattttttctaaaaacaatatctcaaccaaacgggccttatgggcataagtt 107  Q
    ||||||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36044113 atgaacactattaaaataataaaagtgattttttggttaaaaaaaatagattttttctaaaaacaatatctcaaccaaacgggccttatgggcataagtt 36044014  T
Q  108 tcttgaggccgttcaacaaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaa 207  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || ||||||||     
T  36044013 tcttgaggccgttcaacaaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctctccaagataactaatgaag 36043914  T
Q  208 acagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataatcatgatgatgagagctatagaaatagtg 307  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  36043913 acagtttatagcttatacgaaaacaatttaactcaattttatctttcgctatagaaacagtttgtacataatcatgatgatgagagctatagaaatagtg 36043814  T
Q  308 cattaaaattcacctttgcatcattacgaacaaattggattccatgtccaggatacacagttgaagaacaaaaccaacatttc 390  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36043813 cattaaaattcacctttgcaacattacgaacaaattggattccatgtccaggatacacagttgaagaacaaaaccaacatttc 36043731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 36044276 - 36044175
Alignment:
Q  8 atgaacacagttaaaataataaaagtgattttttggttaaaagaaatagattttttctaaaaacaatatctcaaccaaacgggccttatgggcataagtt 107  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  36044276 atgaacactattaaaataataaaagtgattttttggttaaaaaaaatagagtttttctaaaaacaatatctcaaccaaacgggccttatgggcataagtt 36044177  T
Q  108 tc 109  Q
    ||    
T  36044176 tc 36044175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 127 - 278
Target Start/End: Complemental strand, 750760 - 750610
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||| | || | |||||||||||||||||||||| |||| | || |||||| | |||||| ||||| ||| |||||| | ||||||||||||    
T  750760 aacttatgaaaagagctaatgacattgttcataagctgttttgagcttatttgcataagttctccaagatagcttatg-aaacagctcatagcttatacg 750662  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
     ||||| ||||| ||   |||| | || ||||||||||||||||||||||||    
T  750661 taaacagtttaactctcatttaccctttgctatagaaacagtttatacataa 750610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 135 - 278
Target Start/End: Complemental strand, 3611308 - 3611165
Alignment:
Q  135 aaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaat 234  Q
    ||||||||||| |||||| ||||||| |||||||||||| | ||||||||| | |||||| |||||  |||||||||| ||||   ||||| ||||||||    
T  3611308 aaaacaacttatgacattattcataaactgtttttagcttattttcataagttctccaagatagcttgtgaaaacagtctataaactatacaaaaacaat 3611209  T
Q  235 ttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||| |  |||||| |||| |||||||||| |  ||||||||||    
T  3611208 ttaactttattttaccttttgctatagaaataacttatacataa 3611165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 18066218 - 18066107
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| ||||||| ||||||||| |||| | || | |||| |||| | |||||| ||||| |||||||||| |||||||||||| |    
T  18066218 aacttatgaaaacagcttatgacattgctcataagctattttcaccttattttcttaagttctccaagatagcttatgaaaacagcttatagcttatatg 18066119  T
Q  227 aaaacaatttaa 238  Q
    ||||||||||||    
T  18066118 aaaacaatttaa 18066107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 26626963 - 26626852
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||| ||||| | |||| |||||||||||||| ||||||| || | | ||||||||| | | |||| ||||| |||||||||| || |||||||||||    
T  26626963 aacttacgaaaatagcttatgacattgttcataatctgttttcaggttattttcataagttctgcaagatagcttatgaaaacagcttctagcttatacg 26626864  T
Q  227 aaaacaatttaa 238  Q
    ||||||||||||    
T  26626863 aaaacaatttaa 26626852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 129 - 238
Target Start/End: Complemental strand, 40279285 - 40279176
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaa 228  Q
    ||||||||||||||||| | |||||||||||| || |||| |||| | ||||||||| | |||||  ||||| |||||||||  ||||| ||||||| ||    
T  40279285 cttatgaaaacaacttatggcattgttcataaactattttcagctaattttcataagttctccaacatagcttatgaaaacaacttatatcttataccaa 40279186  T
Q  229 aacaatttaa 238  Q
    ||||||||||    
T  40279185 aacaatttaa 40279176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 263
Target Start/End: Complemental strand, 43570503 - 43570368
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| ||||||||||||||||| ||||||||| | |||||||||||||||| | | ||| ||||| | |   ||||||||| | |    
T  43570503 aacttatgaaaacagcttatgacattgttcataagct-tttttagcttattttcataagctttccaggatggcttatgaagataacgtatagcttaaatg 43570405  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaa 263  Q
    |||||||||||| |  ||||||| |||  ||||||||    
T  43570404 aaaacaatttaacttcattttatattttactatagaa 43570368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 1625990 - 1625879
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||  | |||| |||| |||||||||| |||||| |||| | |||| |||| | |||||| ||||| |||||||||  ||||| ||||||||    
T  1625990 aacttatgaaagtagcttatgacaatgttcataagatgttttcagctgattttcgtaagttctccaagatagcttatgaaaacaacttataacttatacg 1625891  T
Q  227 aaaacaatttaa 238  Q
    ||||||||||||    
T  1625890 aaaacaatttaa 1625879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 680589 - 680483
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    ||||||||||| |||| ||||| ||| |||| ||||||| |||| | ||||| ||| | | |||| ||||| ||||||| || |||||||||||||||||    
T  680589 ttatgaaaacagcttatgacat-gtttataaactgttttcagcttattttcacaagttcttcaagatagcttatgaaaatagcttatagcttatacgaaa 680491  T
Q  230 acaattta 237  Q
    ||||||||    
T  680490 acaattta 680483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 218
Target Start/End: Complemental strand, 9174897 - 9174814
Alignment:
Q  135 aaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatag 218  Q
    ||||||||||| ||||||||||||||||| |||| |||| | ||||||||||| |  ||| ||||| |||||||||| ||||||    
T  9174897 aaaacaacttatgacattgttcataagctattttcagcttattttcataagctctgtaagatagcttatgaaaacagcttatag 9174814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 264
Target Start/End: Complemental strand, 9395218 - 9395083
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaa 228  Q
    ||||| |||||| |||| | | ||||| |||||||||||| |||| | ||||||||||| | ||   || ||||||||||||| |||||| ||||| |||    
T  9395218 cttataaaaacagcttatgtcgttgtttataagctgttttcagcttattttcataagctctacagaataactaatgaaaacagcttatagattatatgaa 9395119  T
Q  229 aacaatttaattcaattttatctttcgctatagaaa 264  Q
    |||||||||  |  |||||||||||  |||||||||    
T  9395118 aacaatttagctttattttatctttttctatagaaa 9395083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 13866910 - 13866828
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||||||||| || |||||| |||||  |||||| ||| | | |||||||||||| |||||||||| |||||||||||||    
T  13866910 tagctaatgaaaagagcttatagattatataaaaacagtttgacttaattttatcttttgctatagaaatagtttatacataa 13866828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 16451208 - 16451118
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttata 217  Q
    ||||||||||||||||||| |||||||||||| ||||||||| |||| | |||||  || | |||||| ||||| | |||||||| |||||    
T  16451208 aacttatgaaaacaacttatgacattgttcatgagctgttttcagcttattttcacgagttctccaagatagcttacgaaaacagcttata 16451118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 135 - 253
Target Start/End: Complemental strand, 36114501 - 36114383
Alignment:
Q  135 aaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaat 234  Q
    ||||||||| | || |||||||| ||||||||||||||| | ||| ||||| | |||||| ||||| |||||| |  ||| ||||| |||| ||||||||    
T  36114501 aaaacaactaatgaaattgttcaaaagctgtttttagcttatttttataagatctccaagatagcttatgaaacctatttttagctaatacaaaaacaat 36114402  T
Q  235 ttaattcaattttatcttt 253  Q
    |||| |  |||||||||||    
T  36114401 ttaactttattttatcttt 36114383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 200
Target Start/End: Complemental strand, 4607015 - 4606942
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagct 200  Q
    ||||| ||||||||||||| |||||||||||| ||||| |||||||| | ||||||||| | |||||| |||||    
T  4607015 aacttgtgaaaacaacttatgacattgttcatgagctgcttttagcttattttcataagttctccaagatagct 4606942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 275
Target Start/End: Original strand, 26143620 - 26143769
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatag-cttatac 225  Q
    |||||| |||||||||||| | ||||||||| | | | |||| |||| | ||||||||| | |||||||||||| |||||||||| ||| ||  || |||    
T  26143620 aacttacgaaaacaacttatgtcattgttcacaggttattttcagcttattttcataagttctccaagttagcttatgaaaacagcttacagttttttac 26143719  T
Q  226 gaaaacaatttaattcaattttatctttcgctatagaaacagtttataca 275  Q
    ||| | |||| || |  ||||||||||| |||||||||| || |||||||    
T  26143720 gaatataattgaactttattttatcttttgctatagaaatagcttataca 26143769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 33941998 - 33941890
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||||||||||| ||||  |||||||||||| ||| | || | | |||||| || |||||| ||||| |||||||||  ||||| |||||||     
T  33941998 aacttatgaaaacaacttatgacaa-gttcataagctgctttcaacttattatcataaactctccaagatagcttatgaaaacaagttataacttataca 33941900  T
Q  227 aaaacaattt 236  Q
    ||||||||||    
T  33941899 aaaacaattt 33941890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 40279355 - 40279274
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaaca 210  Q
    ||||||||||||||||| | |||||||||||| ||||||| |||| | ||||||||| | |||||  ||||| |||||||||    
T  40279355 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaaca 40279274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 40279425 - 40279344
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaaca 210  Q
    ||||||||||||||||| | |||||||||||| ||||||| |||| | ||||||||| | |||||  ||||| |||||||||    
T  40279425 cttatgaaaacaacttatggcattgttcataaactgttttcagctaattttcataagttctccaatatagcttatgaaaaca 40279344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 177 - 273
Target Start/End: Original strand, 656807 - 656903
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttata 273  Q
    ||||||||||| | |||| ||||| |||||| ||  ||| |||||||||||||||||||| |||  ||||||||||| | |||||||| || |||||    
T  656807 tttcataagctctgcaagatagcttatgaaatcaacttacagcttatacgaaaacaatttgattatattttatcttttgttatagaaatagcttata 656903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 22681190 - 22681274
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaattt 236  Q
    |||||||||||||||||||||| | || |||||| | || | | ||| | |||||||||| |||||||||||| |||||||||||    
T  22681190 tgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaattt 22681274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 238
Target Start/End: Complemental strand, 41851622 - 41851514
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    ||||| |||||||||| |||| | |||||||||| || | |||| ||||||||||  | |||||| |||||  ||||||||  ||||||| ||||| |||    
T  41851622 ttatggaaacaacttatgacacttttcataagcttttctcagcttaatttcataaattctccaagatagcttctgaaaacaacttatagcatatacaaaa 41851523  T
Q  230 acaatttaa 238  Q
    |||||||||    
T  41851522 acaatttaa 41851514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 278
Target Start/End: Complemental strand, 42458035 - 42457887
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    ||||||||||||||||  ||||| |  ||||| |||||| |||| | ||||||| | | || ||| ||||| ||||| |||| | | |||||| || |||    
T  42458035 ttatgaaaacaacttaaaacattttcaataagttgttttcagcttattttcatatgttctctaagatagcttatgaatacagctaagagcttaaacaaaa 42457936  T
Q  230 acaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||||| |  |||||||||||  ||||||||| || ||||||||||    
T  42457935 acaatttaactttattttatcttttactatagaaatagattatacataa 42457887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 8017523 - 8017413
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| || || ||||||||  ||||||  ||  | ||||||||| | |||||| ||||| |||||||||||||| |||||||| |    
T  8017523 aacttatgaaaacagcttatgatat-gttcataatttgttttctgcgtattttcataagttctccaagatagcttatgaaaacagtttacagcttatatg 8017425  T
Q  227 aaaacaatttaa 238  Q
    |||| |||||||    
T  8017424 aaaataatttaa 8017413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 142 - 253
Target Start/End: Original strand, 12464468 - 12464579
Alignment:
Q  142 cttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattc 241  Q
    ||||||||||  |||| ||||| |||| |||| | ||||| ||| | |||||| ||||| ||||||| || ||||||| ||||| |||||||||||| |     
T  12464468 cttacgacatatttcacaagcttttttcagcttattttcacaagttctccaagatagcttatgaaaatagcttatagcatatacaaaaacaatttaactt 12464567  T
Q  242 aattttatcttt 253  Q
     |||||||||||    
T  12464568 tattttatcttt 12464579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 42592354 - 42592292
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    |||||||||| |||||||||||| |||||||| |||| | |||||||||||| | ||||||||    
T  42592354 atgaaaacagcttatagcttatatgaaaacaagttaacttaattttatcttttggtatagaaa 42592292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 42817360 - 42817461
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    |||||||||||||||||| ||| |||| |||| ||||||||||| | || |||||||| | ||   ||||| |||||||||||||||  |||||| ||||    
T  42817360 ttatgaaaacaacttacggcat-gttcttaagttgtttttagcttacttccataagctcttcagaatagcttatgaaaacagtttattacttatatgaaa 42817458  T
Q  230 aca 232  Q
    |||    
T  42817459 aca 42817461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 238
Target Start/End: Original strand, 43911004 - 43911090
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    |||||||||| |||||| |||| | | ||| |||||||||||| |||||  ||||||||  |||| ||||||||| |||||||||||    
T  43911004 tgttcataagttgttttcagcttattatcacaagctttccaagatagcttttgaaaacaacttatggcttatacggaaacaatttaa 43911090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 235
Target Start/End: Original strand, 28039316 - 28039420
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    |||||||||||| ||| ||| |||||||||||||||||| |||| | || |||||  ||||||||  |||| |||||||  | |||||| ||||| ||||    
T  28039316 ttatgaaaacaagttatgac-ttgttcataagctgttttcagcttatttccataacttttccaagaaagcttatgaaaattgcttatagtttatatgaaa 28039414  T
Q  230 acaatt 235  Q
    ||||||    
T  28039415 acaatt 28039420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 35378999 - 35379079
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaaca 210  Q
    |||||||||||| || | ||| ||||||||||| |||||| |||| | ||||||||||| |||||| ||||| |||||||||    
T  35378999 cttatgaaaacagctgatgac-ttgttcataagttgttttcagcttattttcataagctctccaagatagcttatgaaaaca 35379079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 40158807 - 40158703
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| ||||| ||| ||||| |||||| |||| |||| |||||||| ||||   || || |||||||||  |||| |||||||||    
T  40158807 aacttatgaaaacagcttatgacat-gtttataagttgttttcagcttaattacataagctctccagaataacttatgaaaacaacttattgcttatacg 40158709  T
Q  227 aaaaca 232  Q
    ||||||    
T  40158708 aaaaca 40158703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 41875683 - 41875780
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatac 274  Q
    |||| ||||||  ||||| ||||| |||||||||| ||| ||||||||||||||||| ||||    ||||||||||| | || |||||||| ||||||    
T  41875683 tttcttaagctcaccaagatagcttatgaaaacagcttacagcttatacgaaaacaacttaacatcattttatctttggttaaagaaacagcttatac 41875780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 42907426 - 42907338
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatg--aaaacagtttatagcttatacgaaaacaatttaa 238  Q
    ||||||||||||| ||| |||  | ||||||||||| |||||||||||  |||  ||||||  |||||||||| |||||||||||||||    
T  42907426 tgttcataagctgctttcagcctattttcataagctctccaagttagcatatgtgaaaacaacttatagcttaaacgaaaacaatttaa 42907338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 43036648 - 43036572
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaa 202  Q
    ||||||||||| |||| |||| |||||| ||||||| ||| |||||||| | ||||||||| |||||||| |||||||    
T  43036648 aaaacttatgagaacatcttatgacattattcataaactg-ttttagcttactttcataagttttccaagatagctaa 43036572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 274
Target Start/End: Original strand, 12313157 - 12313299
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    ||||||||||| |||| | ||| ||||||||| || ||| | || | ||||||||||| |||||| ||||| ||| ||||| ||| ||||||| || |||    
T  12313157 ttatgaaaacagcttatgccat-gttcataagttgatttcaccttattttcataagctctccaagatagcttatgtaaacaatttgtagcttaaacaaaa 12313255  T
Q  230 acaatttaattcaattttatctttcgctatagaaacagtttatac 274  Q
    | ||||||| |  ||||||||||| |  ||| |||||||||||||    
T  12313256 ataatttaactttattttatcttttgtgata-aaacagtttatac 12313299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 100 - 168
Target Start/End: Complemental strand, 18179066 - 18178998
Alignment:
Q  100 cataagtttcttgaggccgttcaacaaaacttatgaaaacaacttacgacattgttcataagctgtttt 168  Q
    |||||||||  |||| ||| |||| | |||||| ||||||||||||||||||  |||||||||||||||    
T  18179066 cataagttttgtgagaccgctcaagagaacttacgaaaacaacttacgacatcattcataagctgtttt 18178998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 264
Target Start/End: Original strand, 41241141 - 41241249
Alignment:
Q  156 cataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcg 255  Q
    |||||||| |||| |||| ||||||| ||| |||||||| || || | ||||||   ||||||| ||||| |||||||||||| |  |||||||||||      
T  41241141 cataagcttttttcagcttaatttcacaagttttccaagataacttaggaaaactacttatagcatatacaaaaacaatttaacttcattttatcttttc 41241240  T
Q  256 ctatagaaa 264  Q
    |||||||||    
T  41241241 ctatagaaa 41241249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 177 - 232
Target Start/End: Complemental strand, 9556279 - 9556224
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaaca 232  Q
    |||||||||||||| | | ||||| |||||||||||||||||||| || |||||||    
T  9556279 tttcataagctttctaggatagcttatgaaaacagtttatagcttgtatgaaaaca 9556224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 238
Target Start/End: Original strand, 29316764 - 29316866
Alignment:
Q  135 aaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaat 234  Q
    |||||| |||| ||||| ||||||||| | |||| |||| | || |||||| | |||||| ||||| |||||||||| |||||| ||||  |||||||||    
T  29316764 aaaacagcttatgacat-gttcataagttcttttcagcttatttccataagttctccaagatagctgatgaaaacagcttatagattatgtgaaaacaat 29316862  T
Q  235 ttaa 238  Q
    ||||    
T  29316863 ttaa 29316866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 234
Target Start/End: Original strand, 35378513 - 35378619
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| || | ||| ||||||||||| | |||| |||| | ||||||||||| |||||| | ||| | |||||||| | |||| |||||||    
T  35378513 aacttatgaaaacagctgatgac-ttgttcataagttattttcagcttattttcataagctatccaagattgcttacgaaaacagctaatagattatacg 35378611  T
Q  227 aaaacaat 234  Q
    ||| ||||    
T  35378612 aaatcaat 35378619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 236
Target Start/End: Complemental strand, 1899956 - 1899922
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaattt 236  Q
    ||||||||| |||||||||||||||||||||||||    
T  1899956 atgaaaacattttatagcttatacgaaaacaattt 1899922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 278
Target Start/End: Original strand, 18962087 - 18962169
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||| ||||||| ||||||||||||||| ||||||| ||||| |  ||||||||||| | |||| ||| || | ||||||||    
T  18962087 tagcttatgaaaatagtttatagcttatatgaaaacagtttaactttattttatcttttgttataaaaatagctaatacataa 18962169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 2142744 - 2142687
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataa 184  Q
    ||||||||||||||| ||  |||| ||||||| |||||||||||||| | ||||||||    
T  2142744 aacttatgaaaacaagttgtgacaatgttcattagctgtttttagcttattttcataa 2142687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 278
Target Start/End: Complemental strand, 2416325 - 2416252
Alignment:
Q  205 aaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||| ||||||||||||  |||||||||||| |  ||||||||||| |||| ||||| |  ||||||||||    
T  2416325 aaaacagcttatagcttatatcaaaacaatttaacttcattttatcttttgctacagaaataacttatacataa 2416252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 253
Target Start/End: Original strand, 11863703 - 11863756
Alignment:
Q  200 taatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatcttt 253  Q
    |||||||||||| |||||  ||||| ||||||||||||| || |||||||||||    
T  11863703 taatgaaaacagcttataaattatatgaaaacaatttaactctattttatcttt 11863756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 236
Target Start/End: Complemental strand, 25800855 - 25800810
Alignment:
Q  191 caagttagctaatgaaaacagtttatagcttatacgaaaacaattt 236  Q
    |||| ||||| |||||||||| |||||||||||| |||||||||||    
T  25800855 caagatagcttatgaaaacagcttatagcttatatgaaaacaattt 25800810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 238
Target Start/End: Original strand, 33319822 - 33319903
Alignment:
Q  157 ataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    ||||||| |||| |||| | ||||||||| | |||||| ||| | |||||||||||||||||  ||||| |||||| |||||    
T  33319822 ataagcttttttcagcttattttcataagttctccaagatagtttatgaaaacagtttatagtatatacaaaaacagtttaa 33319903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 34339123 - 34339062
Alignment:
Q  217 agcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||||||||| | | | |  ||||||||||| |||||||||| |||||||||||||    
T  34339123 agcttatacgaaaacagtctgactttattttatctttagctatagaaaaagtttatacataa 34339062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 264
Target Start/End: Complemental strand, 45229601 - 45229465
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||| | |||| |||||| ||||| |||| |||| |||| | ||||||||| | || ||| ||||| |||||||||  | ||| | |||||     
T  45229601 aacttatgaaaagaccttatgacatttttcattagcttttttcagcttattttcataagttctcgaagatagcttatgaaaaca-atgataacatataca 45229503  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    ||||||||||||    |||||||| || ||||||||||    
T  45229502 aaaacaatttaacctcattttatcgtttgctatagaaa 45229465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 1647029 - 1646953
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||| ||||||||||||  ||||||||| || | ||||||||| || |||||| ||| || || |||||||    
T  1647029 atgaaaacagcttatagcttataaaaaaacaattgaacttaattttatcgtttgctatacaaatagcttgtacataa 1646953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 150 - 234
Target Start/End: Original strand, 29628746 - 29628830
Alignment:
Q  150 attgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaat 234  Q
    |||||||||||  |||||| |||| | || |||||  |||||||| ||||| |||| ||||  ||||||||||||| ||||||||    
T  29628746 attgttcataaattgttttcagcttatttccataaattttccaagatagcttatgagaacaacttatagcttatacaaaaacaat 29628830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 136 - 200
Target Start/End: Original strand, 41809235 - 41809298
Alignment:
Q  136 aaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagct 200  Q
    |||||||||| ||||| ||||||||| ||||||||||| | || ||||||||||| ||| |||||    
T  41809235 aaacaacttatgacat-gttcataagttgtttttagcttatttccataagctttctaagatagct 41809298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 169
Target Start/End: Complemental strand, 44600619 - 44600583
Alignment:
Q  133 tgaaaacaacttacgacattgttcataagctgttttt 169  Q
    |||||||| |||| |||||||||||||||||||||||    
T  44600619 tgaaaacagcttatgacattgttcataagctgttttt 44600583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 1e-35; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 130 - 278
Target Start/End: Complemental strand, 39105551 - 39105403
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    ||||||||||| |||| ||||||||||||||||| ||||||||| | ||||||||| | |||||| ||||| |||||||||| |||||||||||||||||    
T  39105551 ttatgaaaacagcttatgacattgttcataagctatttttagcttattttcataagttctccaagatagcttatgaaaacagattatagcttatacgaaa 39105452  T
Q  230 acaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||||| |  |||| || ||| |||||||||| || ||||||||||    
T  39105451 acaatttaacttcatttcatatttagctatagaaatagcttatacataa 39105403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 131 - 278
Target Start/End: Complemental strand, 12425657 - 12425510
Alignment:
Q  131 tatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaa 230  Q
    |||||||||||| ||  |||||||  ||||| |||||| | || | ||||||||| | |||||| |||||  ||||||||| ||||||||||||||||||    
T  12425657 tatgaaaacaacctaaaacattgtcaataagttgttttcaacttattttcataagttctccaagatagcttgtgaaaacagcttatagcttatacgaaaa 12425558  T
Q  231 caatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||| |  |||||||||||  ||||| ||| |||||||||||||    
T  12425557 caatttaactttattttatcttttactatataaatagtttatacataa 12425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 125 - 278
Target Start/End: Original strand, 9202726 - 9202879
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttata 224  Q
    |||||| ||| ||||| |||| |||||||||||||||||||||  |||| | ||||||||| | | |||| || || |||||||||| |||| |||||||    
T  9202726 aaaactaatggaaacagcttatgacattgttcataagctgtttccagcttattttcataagttcttcaagataacttatgaaaacagcttattgcttata 9202825  T
Q  225 cgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
     ||||||||||||| |  ||||||||||| |||| ||||| || ||||| ||||    
T  9202826 tgaaaacaatttaactttattttatcttttgctacagaaatagcttatatataa 9202879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 278
Target Start/End: Complemental strand, 7674737 - 7674587
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||| |||||||||| ||||| ||| ||||| |||||| |||| | ||||| ||  | |||||| ||||| ||||||||| ||||| ||||||| |    
T  7674737 aacttatggaaacaacttatgacat-gtttataaggtgttttcagcttattttcacaaattctccaagatagcttatgaaaacattttatggcttataag 7674639  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||||| |  ||||||||||| | |||||||| || ||||| ||||    
T  7674638 aaaacaatttaaatttattttatcttttggtatagaaatagcttatatataa 7674587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 273
Target Start/End: Complemental strand, 10640043 - 10639897
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| |||||| |||||||||| ||| ||||| | ||||||||| | |||||  ||| | ||| |||||  | ||  | |||||     
T  10640043 aacttatgaaaacagcttatgacatttttcataagctttttctagcttattttcataagttctccaaaatagtttatgtaaacaactcatcacatataca 10639944  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaacagtttata 273  Q
    |||||||||||||| |||||||||||| |||||||||| || |||||    
T  10639943 aaaacaatttaatttaattttatcttttgctatagaaatagcttata 10639897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 196 - 273
Target Start/End: Complemental strand, 15246854 - 15246777
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttata 273  Q
    ||||| |||||||||| | |||||||||||||||| | ||||| | |||||||||||| |||||||||||||||||||    
T  15246854 tagcttatgaaaacagctcatagcttatacgaaaatagtttaaattaattttatctttggctatagaaacagtttata 15246777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 129 - 235
Target Start/End: Original strand, 40119850 - 40119956
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaa 228  Q
    ||||||||||||||| | ||||||||||| |||||||| |||| | | ||||| ||| | |||||| | ||| |||||||||| |||||||||||||| |    
T  40119850 cttatgaaaacaactaatgacattgttcacaagctgttcttagattattttcacaagttatccaagatcgcttatgaaaacaggttatagcttatacgga 40119949  T
Q  229 aacaatt 235  Q
    || ||||    
T  40119950 aataatt 40119956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 152 - 277
Target Start/End: Original strand, 4014429 - 4014554
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatct 251  Q
    ||||||||||||||||| |||| | ||||||||| | |||||| ||||| |||||||||| ||||   || | | |||||||| ||| |  |||||||||    
T  4014429 tgttcataagctgttttcagcttattttcataagttctccaagatagcttatgaaaacagcttatcatttttccaaaaacaatctaactttattttatct 4014528  T
Q  252 ttcgctatagaaacagtttatacata 277  Q
    || |||||||||| || |||||||||    
T  4014529 tttgctatagaaatagcttatacata 4014554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 2568747 - 2568636
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| |||||  |||||||| | ||||||||| | |||||| |||| |||| | ||||| |||||||||  ||||||||||||||    
T  2568747 aacttatgaaaacagcttatgacata-ttcataagttatttttagcttattttcattagctctccatgatagcttatgaaaacaacttatagcttatacg 2568649  T
Q  227 -aaaacaatttaa 238  Q
     ||||||||||||    
T  2568648 aaaaacaatttaa 2568636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 158 - 253
Target Start/End: Original strand, 10272442 - 10272537
Alignment:
Q  158 taagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatcttt 253  Q
    |||| |||||| |||| | |||||||| || |||||| | ||| |||||||||  |||||||||||||||||||||||| | | ||||||||||||    
T  10272442 taagttgttttcagcttattttcataaactctccaagatggcttatgaaaacaacttatagcttatacgaaaacaatttgacttaattttatcttt 10272537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 260
Target Start/End: Original strand, 16457959 - 16458091
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| |||| | |||||||||| |||| || | | ||||| ||| | ||||| |||||| || ||||||  ||||||| |||||     
T  16457959 aacttatgaaaacagcttatgacagttttcataagctcttttcagtttattttcacaagttctccaatttagctcataaaaacaacttatagcatataca 16458058  T
Q  227 aaaacaatttaattcaattttatctttcgctata 260  Q
    |||||||||||| |  ||||||||||| ||||||    
T  16458059 aaaacaatttaagt-tattttatcttttgctata 16458091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 131 - 278
Target Start/End: Original strand, 12459986 - 12460131
Alignment:
Q  131 tatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaa 230  Q
    ||||||||||||||| ||||| ||||||| | ||||||| ||| | ||||||||||| | |||| |||||  |||| |||  |||||| ||||  |||||    
T  12459986 tatgaaaacaacttatgacat-gttcatatgttgtttttggcttattttcataagctctgcaagatagcttgtgaagacaacttatagtttatttgaaaa 12460084  T
Q  231 caatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||| ||| | | |||||||||| | |||||||| || ||||||||||    
T  12460085 caatataactta-ttttatcttttgttatagaaatagcttatacataa 12460131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 180 - 231
Target Start/End: Original strand, 26005030 - 26005081
Alignment:
Q  180 cataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaac 231  Q
    |||||||| |||||| ||||| ||||||||||| ||||||||||||||||||    
T  26005030 cataagctctccaagctagcttatgaaaacagtatatagcttatacgaaaac 26005081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 148 - 238
Target Start/End: Complemental strand, 7319475 - 7319385
Alignment:
Q  148 acattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    |||||||  ||||| || ||| |||| | ||| ||||| | |||||| ||||| | ||||||||||||||||||||| |||||||||||||    
T  7319475 acattgtctataagttgctttcagcttatttttataagttctccaagatagcttacgaaaacagtttatagcttatatgaaaacaatttaa 7319385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 200 - 246
Target Start/End: Original strand, 34590081 - 34590127
Alignment:
Q  200 taatgaaaacagtttatagcttatacgaaaacaatttaattcaattt 246  Q
    |||||||||||||||||| ||||| |||||||||||||||| |||||    
T  34590081 taatgaaaacagtttataacttattcgaaaacaatttaatttaattt 34590127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 240
Target Start/End: Complemental strand, 37914768 - 37914730
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaatt 240  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  37914768 atgaaaacaatttatagcttatacgaaaacaatttaatt 37914730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 7853730 - 7853689
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttt 168  Q
    |||||||| |||||||||| ||||||||||||||||||||||    
T  7853730 aacttatggaaacaacttatgacattgttcataagctgtttt 7853689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 180 - 249
Target Start/End: Complemental strand, 12975384 - 12975315
Alignment:
Q  180 cataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttat 249  Q
    |||||||| |||||| ||||| ||||| |||| |||||||||||| ||||||||||| |||  |||||||    
T  12975384 cataagctctccaagatagcttatgaacacagcttatagcttatatgaaaacaatttgattttattttat 12975315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 17368765 - 17368661
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||||||||||| |||| |||||||| || ||||| |||| | || ||||| || |||||| ||||| |||||||||  |||||| ||| ||     
T  17368765 aacttatgaaaacaacttatgaca-tgttcatatgcagttttcagcttatttccataacctctccaagatagcttatgaaaacaacttatagattacaca 17368667  T
Q  227 aaaaca 232  Q
    ||||||    
T  17368666 aaaaca 17368661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 18857382 - 18857489
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcata--agctttccaagttagctaatgaaaacagtttatagcttatacga 227  Q
    ||||||||||| || | ||||| |||||||||||||||||| || |||||||||  | || ||||||  |||| |||||||||| |||||| |||||  |    
T  18857382 ttatgaaaacagctaatgacat-gttcataagctgtttttaacttaatttcataacacctctccaagacagcttatgaaaacagcttatagattatagaa 18857480  T
Q  228 aaacaattt 236  Q
    |||||||||    
T  18857481 aaacaattt 18857489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 232
Target Start/End: Complemental strand, 28777063 - 28776978
Alignment:
Q  147 gacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaaca 232  Q
    ||||||||||| || || |||||| || | |||||| || | |||||| ||||| |||||||||| ||||||| ||||||||||||    
T  28777063 gacattgttcaaaaactatttttatcttattttcattagttctccaagatagcttatgaaaacagcttatagcctatacgaaaaca 28776978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 152 - 237
Target Start/End: Complemental strand, 32372956 - 32372871
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaattta 237  Q
    ||||||||||||||||| |||| | ||||||  | | |||||||||| | || |||||||||||| |||||||| |||| ||||||    
T  32372956 tgttcataagctgttttcagcttattttcattggatctccaagttaggttattaaaacagtttattgcttataccaaaataattta 32372871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 37611198 - 37611278
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaaca 210  Q
    ||||||||||||||||  ||||| |||||||||||||||| || | | || |||||||| |||||| ||||| |||||||||    
T  37611198 cttatgaaaacaacttgtgacat-gttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaaca 37611278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 37787928 - 37788008
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaaca 210  Q
    ||||||||||||||||  ||||| |||||||||||||||| || | | || |||||||| |||||| ||||| |||||||||    
T  37787928 cttatgaaaacaacttgtgacat-gttcataagctgttttcaggttatttccataagctctccaagatagcttatgaaaaca 37788008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 5559746 - 5559702
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaatt 240  Q
    |||||||||||||||  ||||||||||||| ||||||||||||||    
T  5559746 tagctaatgaaaacaacttatagcttatactaaaacaatttaatt 5559702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 7985057 - 7984965
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagctt 221  Q
    |||| ||||||| |||  ||| |||||||||||||||||| |||| | ||||||||  | |||||| ||||| ||||||| || |||||||||    
T  7985057 cttaagaaaacagcttgtgacgttgttcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaaaagcttatagctt 7984965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 191 - 280
Target Start/End: Original strand, 18637064 - 18637155
Alignment:
Q  191 caagttagctaatgaaaacagtttatagcttatacg--aaaacaatttaattcaattttatctttcgctatagaaacagtttatacataatc 280  Q
    |||| ||||||||||||| || ||||||||||||||  ||||||||||||||   ||||||||||    | |||||||| ||||||||||||    
T  18637064 caagatagctaatgaaaatagcttatagcttatacgaaaaaacaatttaattttgttttatcttttatgacagaaacagcttatacataatc 18637155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 189 - 237
Target Start/End: Original strand, 34736569 - 34736617
Alignment:
Q  189 tccaagttagctaatgaaaacagtttatagcttatacgaaaacaattta 237  Q
    |||||| |||||||||| ||||||||||||||||||| |||| ||||||    
T  34736569 tccaagatagctaatgataacagtttatagcttatacaaaaataattta 34736617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 278
Target Start/End: Complemental strand, 6593357 - 6593239
Alignment:
Q  159 aagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgcta 258  Q
    ||||| |||| |||| | ||||||||||| || ||| ||||| || ||||||| ||||||| ||||| | || ||||||| |  ||||||||||| | ||    
T  6593357 aagctcttttcagcttattttcataagctctctaaggtagcttatcaaaacagcttatagcctatac-agaataatttaactttattttatcttttgtta 6593259  T
Q  259 tagaaacagtttatacataa 278  Q
    ||||||  ||||||||||||    
T  6593258 tagaaattgtttatacataa 6593239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 230
Target Start/End: Complemental strand, 7907971 - 7907868
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||||| |||   | | |||||||| |||||| |||| ||||||||||||| ||||||  |||| || ||||||  ||||| |||||||     
T  7907971 aacttatgaaaacaacgtactgaaatattcataagttgttttcagcttaatttcataagctctccaagacagcttatcaaaacaacttataacttataca 7907872  T
Q  227 aaaa 230  Q
    ||||    
T  7907871 aaaa 7907868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 181 - 276
Target Start/End: Complemental strand, 14932325 - 14932231
Alignment:
Q  181 ataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacat 276  Q
    |||||||||||| | || || || | ||||| ||||||||||||| |||||||||||| |  ||||||||||| |||||| ||| || ||||||||    
T  14932325 ataagctttccatgataacttataacaacagcttatagcttatac-aaaacaatttaactttattttatcttttgctataaaaatagattatacat 14932231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 205 - 264
Target Start/End: Original strand, 42569038 - 42569097
Alignment:
Q  205 aaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    ||||||| |||||||||||||||||||||||  | |  ||||||||||| ||||||||||    
T  42569038 aaaacagattatagcttatacgaaaacaattagactttattttatcttttgctatagaaa 42569097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 1619177 - 1619069
Alignment:
Q  128 acttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacga 227  Q
    ||||||||||||| |||| | |||| | ||||| ||||||| |||| | ||||||| ||| ||||| |  ||| |||||||||| ||||||||||||||     
T  1619177 acttatgaaaacagcttatgccatt-tacataaactgttttcagctgattttcatatgctctccaaatg-gcttatgaaaacagcttatagcttatacgg 1619080  T
Q  228 aaacaatttaa 238  Q
    ||| |||||||    
T  1619079 aaagaatttaa 1619069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 235
Target Start/End: Original strand, 6587113 - 6587195
Alignment:
Q  153 gttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatt 235  Q
    |||||||||||||||  |||| | ||||| ||| | ||||   ||||| |||||||||  |||||||||||||||||||||||    
T  6587113 gttcataagctgtttacagcttattttcacaagttctccactatagcttatgaaaacaacttatagcttatacgaaaacaatt 6587195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 217
Target Start/End: Original strand, 7318988 - 7319078
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttata 217  Q
    |||||| ||||||||||||    ||||| |||||| |||| | |||| | ||||||||| | |||||| ||||| ||||||||||||||||    
T  7318988 aacttaggaaaacaacttaaactattgtccataagttgttctcagcttattttcataagttctccaagatagcttatgaaaacagtttata 7319078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 32172674 - 32172592
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||| |||||||||| |||||||||||| | |||||| || | |  ||||||||||| | | |||||| |||||||||||||    
T  32172674 tagcttatgaaaacagcttatagcttatatgtaaacaacttgacttcattttatcttttgttgtagaaatagtttatacataa 32172592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 32859703 - 32859756
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataa 184  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| | ||||||||    
T  32859703 ttatgaaaacaacttacgacatttttcataagct-ttttcagcttattttcataa 32859756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 184
Target Start/End: Original strand, 32861875 - 32861928
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataa 184  Q
    ||||||||||||||||||||||| |||||||||| |||| |||| | ||||||||    
T  32861875 ttatgaaaacaacttacgacatttttcataagct-ttttcagcttattttcataa 32861928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 221
Target Start/End: Complemental strand, 18906403 - 18906338
Alignment:
Q  156 cataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagctt 221  Q
    |||||| |||||| |||| | ||  ||||||||| |||| ||||| ||||||||||||||||||||    
T  18906403 cataagttgttttcagcttatttcgataagcttttcaagatagcttatgaaaacagtttatagctt 18906338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 163
Target Start/End: Original strand, 32862659 - 32862692
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagct 163  Q
    ||||||||||||||||||||||| ||||||||||    
T  32862659 ttatgaaaacaacttacgacatttttcataagct 32862692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 238
Target Start/End: Original strand, 36796712 - 36796797
Alignment:
Q  153 gttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    |||||||||||||||| || | | |||  |||| |||||||  |||| ||||||||||| |||||||||||  ||||| |||||||    
T  36796712 gttcataagctgttttcagtttatttttgtaagttttccaatatagcaaatgaaaacagcttatagcttatgtgaaaataatttaa 36796797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 236
Target Start/End: Complemental strand, 40159899 - 40159800
Alignment:
Q  135 aaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaat 234  Q
    ||||||||||| |||||  |||||||||| ||||||||| | ||||| ||||  | |||| ||||| ||||||||  |||||| |||||| |||||||||    
T  40159899 aaaacaacttatgacatgtttcataagctatttttagcttattttcacaagcgct-caag-tagcttatgaaaacgatttataacttatatgaaaacaat 40159802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 177 - 253
Target Start/End: Complemental strand, 36639562 - 36639486
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatcttt 253  Q
    ||||||||||| | |||| ||||| ||||||||||| |||| ||| || ||||||| ||| |||  |||||||||||    
T  36639562 tttcataagctcttcaagatagcttatgaaaacagtctataacttgtatgaaaacattttgattttattttatcttt 36639486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 129 - 173
Target Start/End: Original strand, 37794681 - 37794724
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||||    
T  37794681 cttatgaaaacaacttatgaca-tgttcataagctgttttgagct 37794724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 42099862 - 42099910
Alignment:
Q  137 aacaacttacgacattgttcataagctgtttttagctcaatttcataag 185  Q
    |||| |||| ||||||||||||||||||||||| ||| | |||||||||    
T  42099862 aacagcttatgacattgttcataagctgtttttggcttattttcataag 42099910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 250
Target Start/End: Complemental strand, 42646954 - 42646882
Alignment:
Q  178 ttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatc 250  Q
    |||||||||| |||||| | | | |||||||||  |||||||||| || |||||||||||| | |||||||||    
T  42646954 ttcataagctctccaagatcgtttatgaaaacaccttatagcttaaacaaaaacaatttaacttaattttatc 42646882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 60; Significance: 2e-25; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 127 - 278
Target Start/End: Complemental strand, 10114579 - 10114429
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||||||||  |||||  ||||| |||||||| |||| | ||||||| | | |||||  |||||||||||||||| |||||||||||||     
T  10114579 aacttatgaaaacaacttataacatttatcatatgctgttttcagcttattttcatatgttctccaatatagctaatgaaaacagcttatagcttatacc 10114480  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||||| || |  ||||||||||| |||||||||| || ||||||||||    
T  10114479 aaaacaattcaact-tattttatcttttgctatagaaatagcttatacataa 10114429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 133 - 238
Target Start/End: Complemental strand, 27028915 - 27028810
Alignment:
Q  133 tgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaaca 232  Q
    |||||||| |||| |||||| |||||||||| |||| |||| | ||||||||||| |||||| ||||| |||||||||| ||||||| |||||  |||||    
T  27028915 tgaaaacagcttaggacatttttcataagctattttcagcttattttcataagctctccaagatagcttatgaaaacagcttatagcatatacacaaaca 27028816  T
Q  233 atttaa 238  Q
    ||||||    
T  27028815 atttaa 27028810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 10120846 - 10120735
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| ||||||  ||||| |||||||| |||| | ||||||||| | |||||  ||| ||||| |||||| |||||| ||||||     
T  10120846 aacttatgaaaacagcttatgacatttatcatatgctgttttcagcttattttcataagttctccaatatagttaatgtaaacagcttataggttatacc 10120747  T
Q  227 aaaacaatttaa 238  Q
    ||||||||||||    
T  10120746 aaaacaatttaa 10120735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 215 - 278
Target Start/End: Original strand, 14280469 - 14280532
Alignment:
Q  215 atagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||| ||||||||||||||| |||||||||||| |||||||||| || ||||||||||    
T  14280469 atagcttatatgaaaacaatttaatttaattttatcttttgctatagaaataggttatacataa 14280532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 177 - 270
Target Start/End: Original strand, 29168922 - 29169015
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagttt 270  Q
    ||||||||| |||||||  || || | |||||||| ||||| | ||||| |||| ||||||||| |||||||||||| ||||||||||||||||    
T  29168922 tttcataagttttccaatataacttaggaaaacagcttataacatatacaaaaataatttaatttaattttatcttttgctatagaaacagttt 29169015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 153 - 253
Target Start/End: Complemental strand, 21653145 - 21653045
Alignment:
Q  153 gttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctt 252  Q
    ||||||||||| |||| |||| | ||||||||||| |||||| |||||||||||| || ||| |||| || |||||| |||||||| |  ||||||||||    
T  21653145 gttcataagctattttcagcttattttcataagctctccaagatagctaatgaaagcaatttgtagcctacacgaaatcaatttaactttattttatctt 21653046  T
Q  253 t 253  Q
    |    
T  21653045 t 21653045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 43504840 - 43504733
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||| |||||||||||||||||| ||||| |||||||||||| |||| | || |||||| | |||||| ||||| || ||||||  ||||||||| |||     
T  43504840 aactgatgaaaacaacttacgac-ttgtttataagctgttttcagcttatttccataagttctccaagatagcttataaaaacatcttatagcttctact 43504742  T
Q  227 aaaacaatt 235  Q
    |||||||||    
T  43504741 aaaacaatt 43504733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 35374428 - 35374490
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    |||||| ||| |||||||||||| ||||||||||||| |  ||||||||||||||||||||||    
T  35374428 atgaaatcagattatagcttatatgaaaacaatttaactttattttatctttcgctatagaaa 35374490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 278
Target Start/End: Complemental strand, 38874707 - 38874585
Alignment:
Q  156 cataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcg 255  Q
    |||||||| ||||||||| | ||||||| | | |||||  ||||| |||||||||| ||| |||||||| ||||| ||||| | || ||||||||||| |    
T  38874707 cataagctatttttagcttattttcatatgttctccaaaatagcttatgaaaacagcttagagcttatatgaaaagaatttgactcgattttatctttag 38874608  T
Q  256 ctatagaaacagtttatacataa 278  Q
     || |||||||  ||||||||||    
T  38874607 ttacagaaacaacttatacataa 38874585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 181 - 278
Target Start/End: Original strand, 38036146 - 38036243
Alignment:
Q  181 ataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||| |||||| |||||||| |||||||||||||||||| || |||||||||| | |  ||||||| ||| | || | ||| |||||||||||||    
T  38036146 ataagctctccaagatagctaatcaaaacagtttatagcttacacaaaaacaatttgaatttattttattttttgttaaataaatagtttatacataa 38036243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 32840966 - 32841022
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcata 183  Q
    ||||||||||||||||||| ||||||||||||||| |||||| |||| | |||||||    
T  32840966 aacttatgaaaacaacttatgacattgttcataagttgttttcagcttattttcata 32841022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 1930125 - 1930035
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttata 217  Q
    ||||| ||||||||  ||| |||||||||||||||||||||| |||| | ||||| ||| |  ||||| ||||| |||||||||| |||||    
T  1930125 aacttgtgaaaacagtttatgacattgttcataagctgttttcagcttattttcacaaggtcaccaagatagcttatgaaaacagcttata 1930035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 133 - 194
Target Start/End: Complemental strand, 1113142 - 1113081
Alignment:
Q  133 tgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaag 194  Q
    |||||||| ||||  |||||||||||||||||||||||||| | ||||||||| | ||||||    
T  1113142 tgaaaacagcttaaaacattgttcataagctgtttttagctaattttcataagttctccaag 1113081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 147 - 264
Target Start/End: Complemental strand, 27049436 - 27049321
Alignment:
Q  147 gacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattt 246  Q
    ||||||||||||| |||||||| | || | ||||||||  | ||||| | |||| ||||||| ||||||||||||||||||||| |||| || |  | ||    
T  27049436 gacattgttcatatgctgttttcatcttattttcataatttctccaaat-agcttatgaaaaaagtttatagcttatacgaaaataattgaacttta-tt 27049339  T
Q  247 tatctttcgctatagaaa 264  Q
    ||||||| ||||||||||    
T  27049338 tatcttttgctatagaaa 27049321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 196 - 277
Target Start/End: Complemental strand, 31884615 - 31884534
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacata 277  Q
    ||||| ||||||||| ||||||||||||| |||||||||| ||||  ||||||| ||| | |||||||| |  |||||||||    
T  31884615 tagcttatgaaaacaatttatagcttatatgaaaacaattcaatttgattttatattttgttatagaaataacttatacata 31884534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 232
Target Start/End: Original strand, 42215287 - 42215391
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||| ||||||||| |||| ||| |||||||||||||||||| |||| | || |||||||| |||| | ||||  ||||||| || |||||| ||||||     
T  42215287 aactaatgaaaacagcttatgac-ttgttcataagctgttttcagcttatttacataagctctccaggatagcatatgaaaataggttatagattataca 42215385  T
Q  227 aaaaca 232  Q
    ||||||    
T  42215386 aaaaca 42215391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 278
Target Start/End: Complemental strand, 7646292 - 7646145
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    ||||||||||  |||| ||||| ||| || |||| |||| |||| | || |||||||| |||  || |||| ||||| ||||||||||| |||||| |||    
T  7646292 ttatgaaaactgcttatgacat-gttgatcagctattttcagcttatttccataagctctcctggtcagcttatgaagacagtttatagattatacaaaa 7646194  T
Q  230 acaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||||| |  |||||| ||||   |||||||| || ||||||||||    
T  7646193 acaatttaactttattttaccttttcttatagaaatagcttatacataa 7646145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 278
Target Start/End: Original strand, 37353256 - 37353379
Alignment:
Q  154 ttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatcttt 253  Q
    ||||||| ||||||| || | | ||||||||||| || ||| ||||| | |||||||| ||||||| || || |||||||||||| |  | |||||||||    
T  37353256 ttcataaactgttttcagattattttcataagctctcaaagatagcttaagaaaacagcttatagcatacacaaaaacaatttaacttta-tttatcttt 37353354  T
Q  254 cgctatagaaacagtttatacataa 278  Q
     | |||||||| ||||| |||||||    
T  37353355 tgttatagaaatagtttgtacataa 37353379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 152 - 236
Target Start/End: Original strand, 42215087 - 42215170
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaattt 236  Q
    |||||||||| |||||| |||| | || |||||||| |||||| ||||| ||||||| | ||||||| | |||||||||||||||    
T  42215087 tgttcataagttgttttcagcttatttacataagctctccaagatagcttatgaaaata-tttatagatgatacgaaaacaattt 42215170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 155 - 223
Target Start/End: Original strand, 43717945 - 43718013
Alignment:
Q  155 tcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttat 223  Q
    ||||||||||||||||||| | ||||||||| | |||||| ||||| ||| |||||| ||||| |||||    
T  43717945 tcataagctgtttttagcttactttcataagttctccaagatagcttatgcaaacagcttataacttat 43718013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 191 - 278
Target Start/End: Complemental strand, 3936875 - 3936788
Alignment:
Q  191 caagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||| | |||||||| |||||||||||| ||| ||||||||  |  |||||||| || | |||||||| || ||||||||||    
T  3936875 caagttagcttacgaaaacagcttatagcttataggaagacaatttagctttattttatcctttgttatagaaatagattatacataa 3936788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 232
Target Start/End: Complemental strand, 2482952 - 2482850
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||| |||||||||| |||| |  |||||||||||||||| |||| | ||  ||||| | |||||| ||||  |||||||||| |||||||||||||     
T  2482952 aacttaagaaaacaactcacgataa-gttcataagctgttttcagcttatttctataagttatccaagatagc--atgaaaacagcttatagcttataca 2482856  T
Q  227 aaaaca 232  Q
    ||||||    
T  2482855 aaaaca 2482850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 214 - 264
Target Start/End: Original strand, 3537098 - 3537148
Alignment:
Q  214 tatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    ||||||||||||||||||||||| | |  ||||||||||| ||||||||||    
T  3537098 tatagcttatacgaaaacaatttgactttattttatcttttgctatagaaa 3537148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 162 - 236
Target Start/End: Complemental strand, 7646033 - 7645959
Alignment:
Q  162 ctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaattt 236  Q
    ||||||| |||| | || |||||||||| || ||||||| |||||||||  |||||||||| | |||||||||||    
T  7646033 ctgttttcagcttatttccataagctttacaggttagcttatgaaaacaacttatagcttacatgaaaacaattt 7645959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 214
Target Start/End: Complemental strand, 20672815 - 20672753
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagttt 214  Q
    ||||||||||||||||| |||| | ||||||||||| |||| | ||||| || ||||||||||    
T  20672815 tgttcataagctgttttcagcttattttcataagctctccaggatagcttataaaaacagttt 20672753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Complemental strand, 33808393 - 33808335
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataag 185  Q
    |||||||||||| | |||| || |||||||||||| ||||||||||| | |||||||||    
T  33808393 aacttatgaaaatagcttatgatattgttcataagttgtttttagcttattttcataag 33808335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 278
Target Start/End: Complemental strand, 4558858 - 4558737
Alignment:
Q  157 ataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgc 256  Q
    ||||| ||||||||| | | || |||||||| || | | ||||| ||| |||||| ||||||| |||| ||||| ||||||| |  |||||||||||       
T  4558858 ataagttgtttttagtttatttccataagctctctaggatagcttatggaaacagcttatagcatatatgaaaataatttaactttattttatcttttat 4558759  T
Q  257 tatagaaacagtttatacataa 278  Q
    |||||||| || ||||||||||    
T  4558758 tatagaaatagcttatacataa 4558737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 8407722 - 8407689
Alignment:
Q  133 tgaaaacaacttacgacattgttcataagctgtt 166  Q
    ||||||||||||| ||||||||||||||||||||    
T  8407722 tgaaaacaacttatgacattgttcataagctgtt 8407689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 238
Target Start/End: Complemental strand, 24558881 - 24558832
Alignment:
Q  189 tccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    |||||| ||||| |||||||||  |||||||||||||||||| |||||||    
T  24558881 tccaagatagcttatgaaaacaacttatagcttatacgaaaataatttaa 24558832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Original strand, 31804484 - 31804545
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    ||||||||||| || ||| ||||| |||||||| | ||||| |||||| |||||||||||||    
T  31804484 tttcataagctctcaaagatagctcatgaaaactgcttataacttataggaaaacaatttaa 31804545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 238
Target Start/End: Complemental strand, 8909065 - 8909029
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    |||||||| |||||||||||||| |||||||||||||    
T  8909065 atgaaaactgtttatagcttatatgaaaacaatttaa 8909029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 233
Target Start/End: Complemental strand, 12851267 - 12851160
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttata 224  Q
    |||||||||||||||| ||||  |||| ||||||||| ||||||  ||| | ||||||||||| || | |  |||| ||||||||| ||| ||||||| |    
T  12851267 aaaacttatgaaaacagcttataacat-gttcataagatgttttcggcttattttcataagctctcaaggaaagcttatgaaaacaatttctagcttaca 12851169  T
Q  225 cgaaaacaa 233  Q
    ||| |||||    
T  12851168 cgacaacaa 12851160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 271
Target Start/End: Complemental strand, 29205897 - 29205754
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||| |||||| | || |||||| |||||||||| |||| | || | ||||||||  | |||||  ||| | ||||||| |  ||||||| |||||     
T  29205897 aacttattaaaacagcgtatgacatttttcataagcttttttaacct-actttcataaattctccaaaatagtttatgaaaataacttatagcatataca 29205799  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaacagttta 271  Q
    |||||||||||| |  |||||||||||  ||||||||| ||||||    
T  29205798 aaaacaatttaacttcattttatctttttctatagaaatagttta 29205754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 130 - 170
Target Start/End: Original strand, 40902187 - 40902227
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgttttta 170  Q
    |||||||||||||||| |||||||||  |||||||||||||    
T  40902187 ttatgaaaacaacttaagacattgtttgtaagctgttttta 40902227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 21367757 - 21367646
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| ||||||||||| |||||||||| |||| | ||||||||| | |||||| ||||| |||||||||  |||||  |||||||    
T  21367757 aacttatgaaaacagcttatgacattgttcacaagctgttttcagcttattttcataagttctccaagatagcttatgaaaacaacttatacattatacg 21367658  T
Q  227 aaaacaatttaa 238  Q
    ||||||||||||    
T  21367657 aaaacaatttaa 21367646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 131 - 278
Target Start/End: Original strand, 402526 - 402672
Alignment:
Q  131 tatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaa 230  Q
    |||||||||| |||| |||||||||||||||||||||| |||| ||||||| ||| | | |||| ||| | || ||||||| ||||| ||||||||||||    
T  402526 tatgaaaacagcttatgacattgttcataagctgttttcagcttaatttcacaagttcttcaagatagattataaaaacagcttataacttatacgaaaa 402625  T
Q  231 caattt-aattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||| |||| ||  ||||||||  ||||||||| || ||||||||||    
T  402626 caatttaaatttaa--ttatctttttctatagaaatagcttatacataa 402672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 128 - 238
Target Start/End: Complemental strand, 37795684 - 37795575
Alignment:
Q  128 acttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacga 227  Q
    |||||| ||||||||||||||| |||||| |||||| |||| |||| | ||||||  | || ||||| ||||| ||| ||||||||||||||||||||||    
T  37795684 acttattaaaacaacttacgacgttgttcctaagctattttcagcttactttcatg-gattgccaagatagcttatggaaacagtttatagcttatacga 37795586  T
Q  228 aaacaatttaa 238  Q
    |||||||||||    
T  37795585 aaacaatttaa 37795575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 21574577 - 21574456
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaa 228  Q
    ||||||||||||||||| ||||| |||||||||||| |||||||| | || |||||||| |||| ||||||| || |||| || |||||||||||| | |    
T  21574577 cttatgaaaacaacttatgacat-gttcataagctgcttttagcttatttccataagctctccatgttagcttataaaaaaag-ttatagcttatatgta 21574480  T
Q  229 aacaatttaattcaattttatctt 252  Q
    |||||||||| |  ||||||||||    
T  21574479 aacaatttaactttattttatctt 21574456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 45264346 - 45264457
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||||||||||||| |||||||||||||||||||| | || | |||||  |  ||||||||  |||| ||||||| || ||||||||| || |    
T  45264346 aacttatgaaaacaacttacggcattgttcataagctgttttcaccttattttcaccaattttccaagagagcttatgaaaatagcttatagcttgtaag 45264445  T
Q  227 aaaacaatttaa 238  Q
    ||||||||||||    
T  45264446 aaaacaatttaa 45264457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 191 - 271
Target Start/End: Original strand, 25447288 - 25447368
Alignment:
Q  191 caagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagttta 271  Q
    |||| ||||| |||||||||||||||||||||||| |||||||||||| |  |||||||||||  ||||||||| ||||||    
T  25447288 caagatagcttatgaaaacagtttatagcttatacaaaaacaatttaagtttattttatcttttactatagaaatagttta 25447368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 46778171 - 46778281
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||||||||||| |||||| |||||||| | | || |||| | ||||||||| | |||||| ||| | |||||||||||||||||| || ||     
T  46778171 aacttatgaaaacaacttatgacatttttcataagttttgttcagctta-tttcataagttgtccaagatagtttatgaaaacagtttatagcataaaca 46778269  T
Q  227 aaaacaatttaa 238  Q
    ||||||||||||    
T  46778270 aaaacaatttaa 46778281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 147 - 235
Target Start/End: Original strand, 20170708 - 20170796
Alignment:
Q  147 gacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatt 235  Q
    ||||||||| | ||| ||||||||||| | || |||||||| | |||| ||||| | |||||||||||||||||| |||||||||||||    
T  20170708 gacattgtttaaaagttgtttttagcttatttgcataagctctacaagatagcttaggaaaacagtttatagcttttacgaaaacaatt 20170796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 131 - 238
Target Start/End: Complemental strand, 20880562 - 20880455
Alignment:
Q  131 tatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaa 230  Q
    |||||||||| |||| |||| | |||||||||| |||| |||| | ||||||||| | |||||  |||||  | ||||||||||||||| ||||| ||||    
T  20880562 tatgaaaacagcttatgacaattttcataagcttttttgagcttattttcataagttctccaatatagcttttaaaaacagtttatagcatatacaaaaa 20880463  T
Q  231 caatttaa 238  Q
    ||||||||    
T  20880462 caatttaa 20880455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 270
Target Start/End: Original strand, 33405171 - 33405290
Alignment:
Q  152 tgttcataagctgtttttagctcaa-tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatc 250  Q
    ||||||||| |||||||  ||| || ||||||||| | | |||| ||||| |||||||||| |||||||||||| |||||||| |||| |  |||||| |    
T  33405171 tgttcataaactgttttcggcttaactttcataagttcttcaagatagcttatgaaaacagcttatagcttatatgaaaacaaattaactttattttacc 33405270  T
Q  251 tttcgctatagaaacagttt 270  Q
    ||| |||||||||| |||||    
T  33405271 ttttgctatagaaatagttt 33405290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 45541660 - 45541550
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| ||||| |||||||||||||||| || | | | ||||||| | |||||| ||||| ||||||| |   |||||||||||||    
T  45541660 aacttatgaaaacagcttatgacat-gttcataagctgttttcaggttattctcataagttatccaagatagcttatgaaaataaactatagcttatacg 45541562  T
Q  227 aaaacaatttaa 238  Q
    |||| |||||||    
T  45541561 aaaataatttaa 45541550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 274
Target Start/End: Original strand, 3044249 - 3044386
Alignment:
Q  136 aaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatt 235  Q
    |||||||||| ||||| |||||||||||||||| | || | ||||||||||| |||| ||||||  | |||||||| |||||| ||||| |||||||  |    
T  3044249 aaacaacttatgacat-gttcataagctgttttcaacttattttcataagctctccaggttagcataagaaaacaggttatagattatatgaaaacagat 3044347  T
Q  236 taattcaattttatctttcgctatagaaacagtttatac 274  Q
    |  ||  ||||| ||||||| |||||||| | |||||||    
T  3044348 tggttttattttgtctttcgttatagaaataatttatac 3044386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 130 - 232
Target Start/End: Original strand, 25453842 - 25453944
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    ||||||||||| |||| || | |||||| ||||| |||| |||| | |||||||||||||||| | ||| | ||||||| || |||||| ||||||||||    
T  25453842 ttatgaaaacagcttatgaaaatgttcacaagctcttttcagcttattttcataagctttccaggatagtttatgaaaataggttataggttatacgaaa 25453941  T
Q  230 aca 232  Q
    |||    
T  25453942 aca 25453944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 236
Target Start/End: Complemental strand, 2719558 - 2719450
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||| ||||||||||||    ||||| |||||| |||| | |||| | ||||||||| | |||||| ||||| ||||||||||||||||||||| ||     
T  2719558 aacttaggaaaacaacttaaactattgtccataagttgttctcagcttattttcataagttctccaagatagcttatgaaaacagtttatagcttaaac- 2719460  T
Q  227 aaaacaattt 236  Q
    ||||||||||    
T  2719459 aaaacaattt 2719450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 155 - 275
Target Start/End: Original strand, 44061032 - 44061151
Alignment:
Q  155 tcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttc 254  Q
    |||||||||||||| |||| ||||||||||| | || ||| || |  |||||||||  ||||||||||||  ||||||||||||    |||||||||||     
T  44061032 tcataagctgtttt-agcttaatttcataagttctctaagatatcatatgaaaacaacttatagcttatagaaaaacaatttaaccttattttatctttt 44061130  T
Q  255 gctatagaaacagtttataca 275  Q
    |||||||||| || |||||||    
T  44061131 gctatagaaatagcttataca 44061151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 184
Target Start/End: Original strand, 3194250 - 3194301
Alignment:
Q  133 tgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataa 184  Q
    ||||||||||||| ||||||| ||||||||||||||||||| | ||||||||    
T  3194250 tgaaaacaacttatgacattgatcataagctgtttttagcttattttcataa 3194301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 41724303 - 41724190
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttc-ataagctttccaagttagctaatgaaaacagtttatagcttat 223  Q
    |||||||||| |||||||||| ||||| || |||||| |||||| |||| | |||  ||||||| || | | ||||| ||||||||||||||||||||||    
T  41724303 aaaacttatggaaacaacttatgacat-gtccataagttgttttcagcttattttatataagctctcaaggatagctgatgaaaacagtttatagcttat 41724205  T
Q  224 acgaaaacaatttaa 238  Q
    |  ||| ||||||||    
T  41724204 ataaaaccaatttaa 41724190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 282
Target Start/End: Original strand, 48364912 - 48365014
Alignment:
Q  180 cataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataat 279  Q
    ||||||||||||||| |||||||||||||||  |||| || || | ||||||||||| | |  ||||||||||| | ||| |||| |  |||||||||||    
T  48364912 cataagctttccaaggtagctaatgaaaacaacttatggcgtaaatgaaaacaatttgactttattttatcttttgttatcgaaataacttatacataat 48365011  T
Q  280 cat 282  Q
    |||    
T  48365012 cat 48365014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 155 - 264
Target Start/End: Original strand, 32095199 - 32095308
Alignment:
Q  155 tcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttc 254  Q
    |||||||||  |||||||| | ||| || || ||| |||| ||| | |||||||| | |||||| |||||| |||||||||||| | ||||||||||||     
T  32095199 tcataagctaattttagcttatttttattagtttttcaagatagattatgaaaacggcttatagtttatacaaaaacaatttaacttaattttatctttt 32095298  T
Q  255 gctatagaaa 264  Q
    | ||||||||    
T  32095299 gttatagaaa 32095308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 125 - 238
Target Start/End: Complemental strand, 52619094 - 52618982
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttata 224  Q
    |||||| || ||||||| ||| ||||| ||||||||||| |||| | || | ||||| ||||| | |||| |||||  ||||||||| ||||| ||||||    
T  52619094 aaaactaataaaaacaatttatgacat-gttcataagctattttcaccttattttcacaagctcttcaagatagcttgtgaaaacagcttataacttata 52618996  T
Q  225 cgaaaacaatttaa 238  Q
     |||||||||||||    
T  52618995 tgaaaacaatttaa 52618982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 240
Target Start/End: Original strand, 53789441 - 53789554
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||| || ||||| |||| |||| | |||||||||| |||| |||| ||||||||||| | |||| | ||||| |||| ||||  ||||||| |||||     
T  53789441 aacttttggaaacagcttatgacacttttcataagcttttttcagcttaatttcataagttctccatgatagcttatgataacaacttatagcatatacc 53789540  T
Q  227 aaaacaatttaatt 240  Q
    |||||| |||||||    
T  53789541 aaaacattttaatt 53789554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 30573895 - 30574043
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||||||| ||| | ||| |||||||||||||||| |||| |  ||||| |||| |||||| ||||| |||||||||   ||||| |||||      
T  30573895 aacttatgaaaacaaattatggcat-gttcataagctgttttcagcttatgttcatcagctctccaagatagcttatgaaaacatcatatagattataaa 30573993  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||| || |||| |  |||||||||||   |||||||| || ||||||||||    
T  30573994 aaaaaaacttaactttattttatcttt--ttatagaaatagcttatacataa 30574043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 30956659 - 30956743
Alignment:
Q  180 cataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    |||||| | |||||| |||||  ||||||||  ||||||| ||||| |||||||||||| |  ||||||||||| ||||||||||    
T  30956659 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaa 30956743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 180 - 264
Target Start/End: Original strand, 30972471 - 30972555
Alignment:
Q  180 cataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    |||||| | |||||| |||||  ||||||||  ||||||| ||||| |||||||||||| |  ||||||||||| ||||||||||    
T  30972471 cataagttctccaagatagcttttgaaaacaacttatagcctatacaaaaacaatttaactttattttatcttttgctatagaaa 30972555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 39723379 - 39723426
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  39723379 aaaacttatgaaaacagcttatgacat-gttcataagctgtttttagct 39723426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 202 - 277
Target Start/End: Complemental strand, 1395686 - 1395611
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacata 277  Q
    |||||||||||| |||||||||| ||||| ||||| | |  ||||||||||| | |||||||| || |||||||||    
T  1395686 atgaaaacagttcatagcttatatgaaaataatttgactttattttatcttttgttatagaaatagcttatacata 1395611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 189 - 232
Target Start/End: Complemental strand, 2201156 - 2201113
Alignment:
Q  189 tccaagttagctaatgaaaacagtttatagcttatacgaaaaca 232  Q
    |||||| |||||||||||||||| |||||||||||| |||||||    
T  2201156 tccaagatagctaatgaaaacagcttatagcttatatgaaaaca 2201113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 230
Target Start/End: Original strand, 18405811 - 18405914
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||||||  | |||||| | ||||||| || |||  |||| ||||||||||| | |||||| ||||| |||||||||  ||||||| |||||     
T  18405811 aacttatgaaaacagttcacgacacttttcataatctttttcaagcttaatttcataagttctccaagatagcttatgaaaacaacttatagcatataca 18405910  T
Q  227 aaaa 230  Q
    ||||    
T  18405911 aaaa 18405914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 147 - 278
Target Start/End: Complemental strand, 26878187 - 26878056
Alignment:
Q  147 gacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattt 246  Q
    |||||||||||||| ||||||| |||  | |||||| |  | | |||| |||||||||||||||  ||||| ||  ||| || |||||||||    | ||    
T  26878187 gacattgttcataaactgttttcagcatattttcattaattcttcaagatagctaatgaaaacaacttataactcgtacaaacacaatttaaccttagtt 26878088  T
Q  247 tatctttcgctatagaaacagtttatacataa 278  Q
    ||||||| |||||||||||| |||||||||||    
T  26878087 tatcttttgctatagaaacaatttatacataa 26878056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 129 - 252
Target Start/End: Complemental strand, 30443981 - 30443858
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaa 228  Q
    |||||||||||| |||| |||| | |||| ||||| |||| |||| | ||||||||| | |||||  ||| | || ||||||| ||||||| ||||| ||    
T  30443981 cttatgaaaacagcttatgacaattttcacaagcttttttcagcttattttcataagttctccaatatagtttataaaaacagcttatagcatatacaaa 30443882  T
Q  229 aacaatttaattcaattttatctt 252  Q
    | |||||||| |  ||||||||||    
T  30443881 agcaatttaacttcattttatctt 30443858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 34610786 - 34610897
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||  |||| |||||||||||||||  ||||| |||| | ||||||||| |  ||||| ||||| |||||| ||  ||||| ||| |||     
T  34610786 aacttatgaaaactgcttatgacattgttcataagtggttttcagctgattttcataagttcgccaagatagcttatgaaagcaacttataacttgtaca 34610885  T
Q  227 aaaacaatttaa 238  Q
    |||| |||||||    
T  34610886 aaaataatttaa 34610897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 152 - 278
Target Start/End: Original strand, 36783339 - 36783466
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatct 251  Q
    ||||||||||||||||| |||| |  |||||||    |||||  ||||| |||||||||| | |||| ||||| ||||||||||| | |  |||||||||    
T  36783339 tgttcataagctgttttcagcttatattcataattgctccaatatagcttatgaaaacagctaatagtttatatgaaaacaattttactttattttatct 36783438  T
Q  252 ttcgctatagaaacag-tttatacataa 278  Q
    || | |||||||| || |||||||||||    
T  36783439 tttggtatagaaatagctttatacataa 36783466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 253
Target Start/End: Complemental strand, 1816668 - 1816547
Alignment:
Q  131 tatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaa 230  Q
    |||||||| |||||| |||||| |||||| |||||||| |||| | ||| ||||||| ||||   ||||| |||||||||  ||||| ||||||| ||||    
T  1816668 tatgaaaataacttatgacatt-ttcataggctgttttcagcttattttgataagctctccagtatagcttatgaaaacaacttatatcttatacaaaaa 1816570  T
Q  231 caatttaattcaattttatcttt 253  Q
    || ||| | |  |||||||||||    
T  1816569 cagtttgactttattttatcttt 1816547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 34638034 - 34638096
Alignment:
Q  217 agcttatacgaaaacaatttaa-ttcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||||||||||||||| || ||||||||||||  ||||||||| || ||||| ||||    
T  34638034 agcttatacgaaaacaatttaactttaattttatctttttctatagaaatagcttatatataa 34638096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 37389273 - 37389227
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    ||||||||||||||||||| ||||||||||| | |||| ||||||||    
T  37389273 aacttatgaaaacaacttatgacattgttcaaatgctgcttttagct 37389227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 38462302 - 38462220
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||| |||||||||||||||||| |||| ||||||| ||| | |  ||||||||||| | |||||||| || ||||| ||||    
T  38462302 tagcttatgaaaacagtttatagcatatatgaaaacagtttgactttattttatcttttggtatagaaatagcttataaataa 38462220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 217
Target Start/End: Complemental strand, 20669237 - 20669172
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttata 217  Q
    |||||||||||||||||  ||| | || |||||||| |||||| ||||| |||||||||| |||||    
T  20669237 tgttcataagctgttttccgcttatttacataagctctccaagatagcttatgaaaacagcttata 20669172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 225
Target Start/End: Original strand, 40240791 - 40240864
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatac 225  Q
    ||||||||||||  ||| |||  | |||| |||||| ||||||||||||| ||||||||  |||||||||||||    
T  40240791 tgttcataagctcctttcagcatattttcctaagctgtccaagttagctactgaaaacaacttatagcttatac 40240864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 260
Target Start/End: Original strand, 12862297 - 12862360
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctata 260  Q
    ||||| |||||||||  ||||||| ||||| |||||||||||| || ||||||||||| ||||||    
T  12862297 tagcttatgaaaacaacttatagcatatac-aaaacaatttaaatctattttatcttttgctata 12862360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 21661529 - 21661453
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||||| |||| | ||| | |||||||||||||||| |||||||| ||| | ||| |||| || ||||||||||    
T  21661529 atgaaaacaatttagaacttgtgcgaaaacaatttaatttaattttatattttgttattgaaatagcttatacataa 21661453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Complemental strand, 24785270 - 24785190
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaaca 232  Q
    |||||||||| ||||||||||| | || |||||||| || | | ||||| |||||||||  |||||| |||||| ||||||    
T  24785270 tgttcataagttgtttttagcttatttacataagctctcgaggatagcttatgaaaacacgttatagattatacaaaaaca 24785190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 154 - 238
Target Start/End: Original strand, 28622006 - 28622090
Alignment:
Q  154 ttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    ||||||||||||||| || | | ||||||||| | || ||| ||| | |||||||||| |||||||||| || ||||||| ||||    
T  28622006 ttcataagctgttttcaggttattttcataagttctcgaagatagtttatgaaaacagcttatagcttacacaaaaacaacttaa 28622090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 40665494 - 40665410
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaattt 236  Q
    ||||||||||||||||| |||| | ||| ||||||| |||||| || || |||||||||  ||||| |||| || |||| |||||    
T  40665494 tgttcataagctgttttcagcttatttttataagctctccaagataacttatgaaaacatcttataacttacacaaaaataattt 40665410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 223
Target Start/End: Original strand, 50600159 - 50600254
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttat 223  Q
    ||||||| ||||||||| | ||||| || ||  ||||||||| |||| | ||||||||| | |||||  ||||| |||||||||| |||||||||||    
T  50600159 aacttataaaaacaactcatgacat-gtccacgagctgttttcagcttattttcataagttctccaatatagctgatgaaaacagcttatagcttat 50600254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 55; Significance: 2e-22; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 130 - 272
Target Start/End: Original strand, 24915034 - 24915176
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    |||||||||||||||| |||||| |||||||||| |||| | || | ||||| ||| | ||||||  |||| |||||||||| ||||||| ||||| |||    
T  24915034 ttatgaaaacaacttatgacatttttcataagcttttttcaacttattttcacaagttctccaagacagcttatgaaaacagcttatagcatatacaaaa 24915133  T
Q  230 acaatttaattcaattttatctttcgctatagaaacagtttat 272  Q
    ||||||||| |  ||||||||||  |||||||||| |||||||    
T  24915134 acaatttaactttattttatcttctgctatagaaatagtttat 24915176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 3887612 - 3887763
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| |||||||||||||||||||||||| || | ||||||||| | ||| || |||||  | ||| ||| ||||||||  || |    
T  3887612 aacttatgaaaacatcttatgacattgttcataagctgtttttaacttattttcataagttctcctagctagcttgtaaaatcagcttatagctcgtaag 3887711  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||  ||||||| |  ||||||||||| ||||| |||| || ||||||||||    
T  3887712 aaattaatttaactttattttatcttttgctattgaaatagcttatacataa 3887763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 277
Target Start/End: Complemental strand, 1432605 - 1432455
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||| | | || |||||||||||||||   |  |||||| | ||||||||| | |||||| ||| | ||||||||| |||||||||||||      
T  1432605 aacttatgaaaatagcgtatgacattgttcataagacatacttagcttactttcataagttctccaagatagtttatgaaaacaatttatagcttataaa 1432506  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaacagtttatacata 277  Q
    ||||||||| || || |||||||||||  ||||||||| || |||||||||    
T  1432505 aaaacaattgaactctattttatcttttactatagaaatagcttatacata 1432455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 127 - 253
Target Start/End: Original strand, 31517721 - 31517846
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||| ||||||||| | ||||| |||||||||||||||| |||| | ||||||||||| ||||||  || | ||||| |||| |||||||||||| |    
T  31517721 aacttatcaaaacaactcatgacat-gttcataagctgttttcagcttattttcataagctctccaagacagattatgaagacagcttatagcttatatg 31517819  T
Q  227 aaaacaatttaattcaattttatcttt 253  Q
    ||| |||||||| |  |||||||||||    
T  31517820 aaatcaatttaactttattttatcttt 31517846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 127 - 264
Target Start/End: Original strand, 51695475 - 51695611
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||  ||||||||||  |||||||||||||||| |||| |||| | ||||||||  | |||||| ||||| |||||||||  | ||| ||||||||    
T  51695475 aacttatataaacaacttatcacattgttcataagctattttcagcttattttcataaattctccaagatagcttatgaaaacatctgataacttatacg 51695574  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    ||||||||||| ||  |||||||||||  |||||||||    
T  51695575 aaaacaatttactt-tattttatcttttactatagaaa 51695611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 127 - 277
Target Start/End: Original strand, 37842336 - 37842485
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| || | ||||| |||||||||| ||||| |||| | ||| ||||| | | |||| ||||| |||||||||  ||||||||||| ||    
T  37842336 aacttatgaaaacatctaatgacat-gttcataagcagttttcagcttatttttataagttcttcaagatagcttatgaaaacaacttatagcttattcg 37842434  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaacagtttatacata 277  Q
    || ||| ||||| |  |||| |||||| |||||||||| || |||||||||    
T  37842435 aacacagtttaactttatttcatcttttgctatagaaatagcttatacata 37842485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 178 - 278
Target Start/End: Original strand, 23544670 - 23544771
Alignment:
Q  178 ttcataagctttccaagttagctaatgaaaacagttta-tagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacat 276  Q
    |||||||| ||||| || ||||| |||||||||||||| ||||||||| ||||||||||| | | ||||||||||||  | ||||||| || ||||||||    
T  23544670 ttcataagttttccgagatagcttatgaaaacagtttaatagcttatatgaaaacaatttgacttaattttatctttttccatagaaatagcttatacat 23544769  T
Q  277 aa 278  Q
    ||    
T  23544770 aa 23544771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 140 - 240
Target Start/End: Complemental strand, 7069378 - 7069278
Alignment:
Q  140 aacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaat 239  Q
    |||||| ||||||||||||||  ||||||||  ||| ||||||||| | |||||| ||||| |  ||| ||| ||||||||||||||||||||||| |||    
T  7069378 aacttatgacattgttcataatttgtttttaattcattttcataagttctccaagatagcttacaaaagcagcttatagcttatacgaaaacaattcaat 7069279  T
Q  240 t 240  Q
    |    
T  7069278 t 7069278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 237
Target Start/End: Original strand, 27820332 - 27820427
Alignment:
Q  142 cttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaattta 237  Q
    |||||||||||||||||||||| |||| |||| | ||||||||  | |||||| ||||| || |||||||  ||||||||||||  ||||||||||    
T  27820332 cttacgacattgttcataagctattttcagcttattttcataaattctccaagatagcttataaaaacagcatatagcttatacataaacaattta 27820427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 136 - 278
Target Start/End: Original strand, 836328 - 836470
Alignment:
Q  136 aaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatt 235  Q
    ||||| |||| |||| || ||||||| ||||||||||||| |||||| || ||||  |  ||||| || |||| |  ||||||||||||| |||||||||    
T  836328 aaacagcttatgacaatgctcataagttgtttttagctcattttcattagttttcttaaatagcttataaaaataacttatagcttatacaaaaacaatt 836427  T
Q  236 taattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    || ||  |||||||||||| ||||| ||| || ||| ||||||    
T  836428 tagttttattttatctttcactataaaaatagcttacacataa 836470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 148 - 278
Target Start/End: Complemental strand, 45975759 - 45975629
Alignment:
Q  148 acattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaatttt 247  Q
    ||||| ||||||||||||||| |||| | ||||||||  | |||||| ||||| |||||||||| || |||||||||| |||| | ||  | || |||||    
T  45975759 acattattcataagctgttttcagcttattttcataaattctccaagatagcttatgaaaacagcttgtagcttatacaaaaatatttgtagtctatttt 45975660  T
Q  248 atctttcgctatagaaacagtttatacataa 278  Q
    ||| ||  ||||| ||| |||||||||||||    
T  45975659 atcctttcctatataaatagtttatacataa 45975629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 279
Target Start/End: Complemental strand, 7472366 - 7472250
Alignment:
Q  162 ctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatag 261  Q
    ||||||| |||| | ||||||||||| |||||| ||||| ||| |||||| |||||| |||||| |||||||||||| |  ||| ||||||| | |||||    
T  7472366 ctgttttcagcttattttcataagctctccaagatagcttatggaaacagcttatagattatacaaaaacaatttaact-tattatatcttttgttatag 7472268  T
Q  262 aaacagtttatacataat 279  Q
    ||| || ||||| |||||    
T  7472267 aaatagcttataaataat 7472250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 127 - 235
Target Start/End: Complemental strand, 2777981 - 2777874
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||| ||||||| ||| |  ||||||||| ||||| |||| | ||||||||| | ||||||||| || || ||||||| |||||||||||||     
T  2777981 aacttatgaaaccaacttatgacgta-ttcataagccgttttcagcttattttcataagttctccaagttaacttattaaaacagcttatagcttataca 2777883  T
Q  227 aaaacaatt 235  Q
    || ||||||    
T  2777882 aagacaatt 2777874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 125 - 236
Target Start/End: Original strand, 33723361 - 33723471
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttata 224  Q
    |||||||||| ||||| || | ||||| |||||| || |||||| |||| | || |||||||||| || | ||||| |||||||||||| |||| |||||    
T  33723361 aaaacttatggaaacagctcatgacat-gttcatgagatgttttcagcttatttccataagctttacagggtagcttatgaaaacagttcatagtttata 33723459  T
Q  225 cgaaaacaattt 236  Q
     |||||||||||    
T  33723460 tgaaaacaattt 33723471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 230
Target Start/End: Complemental strand, 4622154 - 4622080
Alignment:
Q  156 cataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaa 230  Q
    |||||||||||||||||| | ||||| ||||| |||||| ||||  ||| |||||| |||||||||||| |||||    
T  4622154 cataagctgtttttagcttattttcacaagctctccaagatagcatatggaaacagcttatagcttatatgaaaa 4622080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 154 - 264
Target Start/End: Complemental strand, 9656713 - 9656603
Alignment:
Q  154 ttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatcttt 253  Q
    ||||||||||||||| |||| | ||||||||    |||| | ||||| ||||| |||| |||||||||||| ||||| ||||||| |  ||||||| |||    
T  9656713 ttcataagctgttttgagcttattttcataattcatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttattttt 9656614  T
Q  254 cgctatagaaa 264  Q
     ||||||||||    
T  9656613 tgctatagaaa 9656603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 44032008 - 44032130
Alignment:
Q  156 cataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcg 255  Q
    |||||||| |||| |||| | || |||||||| | |||| || || | ||||| ||||||||||||||| ||||||||||| | |  |||||| |||| |    
T  44032008 cataagctattttcagctaatttccataagctcttcaagataacttaagaaaatagtttatagcttatatgaaaacaatttgactttattttagcttttg 44032107  T
Q  256 ctatagaaacagtttatacataa 278  Q
     ||||||||| | ||||||||||    
T  44032108 ttatagaaacggcttatacataa 44032130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 128 - 173
Target Start/End: Original strand, 4699597 - 4699641
Alignment:
Q  128 acttatgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||    
T  4699597 acttatgaaaacaacttatgacat-gttcataagctgtttttagct 4699641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 217 - 278
Target Start/End: Complemental strand, 7028292 - 7028231
Alignment:
Q  217 agcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||||| ||||||| |||| |  ||||||||||| |||||||||| |||||||||||||    
T  7028292 agcttatacaaaaacaacttaactttattttatcttttgctatagaaatagtttatacataa 7028231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 273
Target Start/End: Original strand, 28689433 - 28689580
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagct--aatgaaaacagtttatagcttata 224  Q
    |||||| | ||||| |||| ||||| || |||||| |||||| |||| | |||||||||||||||||| |||||   |||||||||  ||||||||||||    
T  28689433 aacttacggaaacagcttatgacat-gtccataagttgttttcagcttattttcataagctttccaagatagcttatatgaaaacaacttatagcttata 28689531  T
Q  225 cgaaaacaatttaattcaattttatctttcgctatagaaacagtttata 273  Q
     |||||| | ||   |  ||||||||||| | |||||||| ||||||||    
T  28689532 tgaaaaccacttgcatttattttatcttttgatatagaaatagtttata 28689580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 154 - 225
Target Start/End: Complemental strand, 34290299 - 34290228
Alignment:
Q  154 ttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatac 225  Q
    |||||||| |||||| |||| | ||||||||| | | |||| ||||| |||||||||| |||||||||||||    
T  34290299 ttcataagttgttttcagcttattttcataagttcttcaagatagcttatgaaaacagcttatagcttatac 34290228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 38503445 - 38503520
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaa 202  Q
    |||||||| ||||| | || ||||||||||||||| |||||| |||| | ||||||||| | |||||| |||||||    
T  38503445 aacttatggaaacagcctatgacattgttcataagttgttttcagcttattttcataagttctccaagatagctaa 38503520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 206 - 273
Target Start/End: Original strand, 49365818 - 49365885
Alignment:
Q  206 aaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttata 273  Q
    |||||||||||||||| || ||||||||||| | || ||||||||||| | ||  |||||||||||||    
T  49365818 aaacagtttatagcttgtatgaaaacaatttgactctattttatcttttgttactgaaacagtttata 49365885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 189 - 278
Target Start/End: Original strand, 3069976 - 3070066
Alignment:
Q  189 tccaagttagctaatgaaaacagtttatagcttatacgaaaa-caatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||| ||||| | |||||||| ||||||| |||||||||| |||||||| |  |||||||||| || |||| |||||| |||| |||||    
T  3069976 tccaagatagcttacgaaaacagcttatagcatatacgaaaaacaatttaacttcattttatcttccgttatataaacagcttatccataa 3070066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 173
Target Start/End: Complemental strand, 4482019 - 4481974
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||    
T  4482019 aacttatgaaaacaacttattacat-gttcataagctgtttttagct 4481974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 9572163 - 9572225
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    |||||||| | ||||||||||||| ||| |||||||| |  ||||||||||| ||||||||||    
T  9572163 atgaaaacggcttatagcttatacaaaagcaatttaactttattttatcttttgctatagaaa 9572225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 187
Target Start/End: Original strand, 11639399 - 11639456
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagct 187  Q
    |||||||||||| |||| ||||| || |||||||||||||||||| | |||||||||||    
T  11639399 cttatgaaaacagcttatgacat-gtccataagctgtttttagcttattttcataagct 11639456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 36151562 - 36151636
Alignment:
Q  204 gaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||| |||||| |||||||||||||||||| | |  ||||||||||| | ||| |||| || ||||||||||    
T  36151562 gaaaacaatttataacttatacgaaaacaatttgactttattttatcttttgttattgaaatagcttatacataa 36151636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 37593663 - 37593724
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagct 187  Q
    |||||| ||||| |||||||| ||||| |||||||||||||||| |||| | |||||||||||    
T  37593663 aaaactaatgaacacaacttatgacat-gttcataagctgttttcagcttattttcataagct 37593724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 47498819 - 47498877
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataag 185  Q
    |||||||||||| | |||| || |||||||||||| ||||||||||| | |||||||||    
T  47498819 aacttatgaaaatagcttatgatattgttcataagttgtttttagcttattttcataag 47498877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 149 - 238
Target Start/End: Complemental strand, 2294979 - 2294890
Alignment:
Q  149 cattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    |||||| ||||||||||||| | || | |||| |||| | |||||| ||| | ||||||| || ||||||||||| | ||||||||||||    
T  2294979 cattgtccataagctgttttcaccttattttcgtaagttctccaagatagtttatgaaaatagcttatagcttatccaaaaacaatttaa 2294890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Original strand, 27146235 - 27146276
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttt 168  Q
    |||||| | |||||||||| ||||||||||||||||||||||    
T  27146235 aacttaaggaaacaacttatgacattgttcataagctgtttt 27146276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 200 - 265
Target Start/End: Original strand, 29128351 - 29128416
Alignment:
Q  200 taatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaac 265  Q
    ||||||||||| ||||||||||| ||||||| || |||| |  ||||||||||| | |||||||||    
T  29128351 taatgaaaacaatttatagcttaaacgaaaataaattaactttattttatcttttgttatagaaac 29128416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 238
Target Start/End: Original strand, 38018342 - 38018455
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttata 224  Q
    ||||||||||||| ||  ||| |||||||||||| || | |||| |||| | |||||| |  | |||||| ||    |||||||||| || |||||||||    
T  38018342 aaaacttatgaaagcagattaggacattgttcattaggtattttcagcttattttcatgaattctccaagataatgtatgaaaacagcttctagcttata 38018441  T
Q  225 cgaaaacaatttaa 238  Q
    ||||||||||||||    
T  38018442 cgaaaacaatttaa 38018455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 278
Target Start/End: Complemental strand, 49888807 - 49888706
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacat 276  Q
    ||||||||| | || ||| ||||| |||||||||  | ||||||||||||||||||||| || |  |||||||||||  | | ||||| || ||||||||    
T  49888807 tttcataagttctctaagatagcttatgaaaacaactaatagcttatacgaaaacaattaaactttattttatctttttccaaagaaatagcttatacat 49888708  T
Q  277 aa 278  Q
    ||    
T  49888707 aa 49888706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 173
Target Start/End: Complemental strand, 489074 - 489034
Alignment:
Q  133 tgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    |||||||| ||||||||||| ||||||||||||||| ||||    
T  489074 tgaaaacagcttacgacattattcataagctgttttcagct 489034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 161
Target Start/End: Complemental strand, 489282 - 489246
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataag 161  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  489282 aaaacttatgaaaacaacttatgacattgctcataag 489246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 236
Target Start/End: Complemental strand, 6279420 - 6279380
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaattt 236  Q
    ||||| ||||||| |||||| ||||||||||||||||||||    
T  6279420 tagcttatgaaaatagtttaaagcttatacgaaaacaattt 6279380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 147 - 264
Target Start/End: Original strand, 15687346 - 15687465
Alignment:
Q  147 gacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatac--gaaaacaatttaattcaat 244  Q
    ||||||| | ||||| | |||| |||||| ||| ||||| | |||||| ||| |||  ||||||| ||||| |||||||  ||||||||||||| | ||     
T  15687346 gacattgcttataagttattttcagctcatttttataagttctccaagatagttaactaaaacagcttatatcttatacacgaaaacaatttaacttaac 15687445  T
Q  245 tttatctttcgctatagaaa 264  Q
    |||||| || ||||||||||    
T  15687446 tttatcatttgctatagaaa 15687465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 279
Target Start/End: Original strand, 27145716 - 27145867
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||| |||||| ||||| ||||||||||||||| | |||| |||| | ||||||||| | | |||| ||  ||||||| | |  |||||  |||||||    
T  27145716 aacttaagaaaacgacttatgacattgttcataag-ttttttcagcttattttcataagttcttcaagatatttaatgaagataacttataaattatacg 27145814  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaacagtttatacataat 279  Q
    |||| ||||||| |  ||||||||| | | | |||||| || |||||||||||    
T  27145815 aaaataatttaaatttattttatctgttgttgtagaaatagcttatacataat 27145867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 49517091 - 49517023
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    ||||| |||||||||| |||||||||| | ||||||||||| | |  ||||||||||| | ||||||||    
T  49517091 tagcttatgaaaacagcttatagcttaaatgaaaacaatttgactttattttatcttttgttatagaaa 49517023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 27 - 63
Target Start/End: Complemental strand, 51985928 - 51985893
Alignment:
Q  27 taaaagtgattttttggttaaaagaaatagatttttt 63  Q
    ||||||||||||||||||||||| |||||||||||||    
T  51985928 taaaagtgattttttggttaaaa-aaatagatttttt 51985893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 54; Significance: 6e-22; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 129 - 278
Target Start/End: Original strand, 9093538 - 9093687
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaa 228  Q
    |||||||||| | |||| ||||||||| |||| ||||||| |||| | |||| |||| | || |||  |||| |||||||||| ||||||||||||||||    
T  9093538 cttatgaaaatagcttatgacattgttaataacctgttttcagcttattttcttaagttctctaagacagcttatgaaaacagcttatagcttatacgaa 9093637  T
Q  229 aacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||| |  ||||||||||| | |||||||| || |||| |||||    
T  9093638 aacaatttaactttattttatcttttgatatagaaatagcttatccataa 9093687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 127 - 278
Target Start/End: Original strand, 9559519 - 9559672
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttca---taagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttat 223  Q
    ||||||||||||||||||| ||||||||||    ||||||||||| | || | ||||||||| | | |||| |||||  |||||||||||| ||| || |    
T  9559519 aacttatgaaaacaacttatgacattgttctgcgtaagctgttttcaacttattttcataagttattcaagatagctt-tgaaaacagtttgtagtttct 9559617  T
Q  224 acgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||||||||||| |  ||||||||||| |||||||||| |  ||||||||||    
T  9559618 acgaaaacaatttaaatttattttatcttttgctatagaaataacttatacataa 9559672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 29274284 - 29274360
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||||||||||||||||||| ||||||||||| | |  ||||||||||| |||||||||| || ||||||||||    
T  29274284 atgaaaacagtttatagcttatatgaaaacaatttgactttattttatcttttgctatagaaatagcttatacataa 29274360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 127 - 262
Target Start/End: Complemental strand, 2735159 - 2735024
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||  |||| |||||| |||||||||||||||  ||| | ||||||||| | | |||| | ||| |||||||||| |||||| ||||||     
T  2735159 aacttatgaaaacggcttatgacatttttcataagctgttttcggcttattttcataagttgttcaagattgcttatgaaaacagcttatagattataca 2735060  T
Q  227 aaaacaatttaattcaattttatctttcgctataga 262  Q
    |||| ||||||| |  ||||||||||| | ||||||    
T  2735059 aaaataatttaactttattttatcttttgttataga 2735024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 129 - 232
Target Start/End: Original strand, 28641732 - 28641834
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaa 228  Q
    |||||||||||| ||||  |||| ||||||||||||||||||||| | ||||||||||| | ||   |||||| |||||||||||||||||||| || ||    
T  28641732 cttatgaaaacagcttataacat-gttcataagctgtttttagcttattttcataagctctgcagaatagctattgaaaacagtttatagcttaaactaa 28641830  T
Q  229 aaca 232  Q
    ||||    
T  28641831 aaca 28641834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 127 - 264
Target Start/End: Complemental strand, 769227 - 769092
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| ||||| |||||||||||||||| | || | |||| ||||   || ||||||||| ||||||||||||||||||||||||     
T  769227 aacttatgaaaacatcttatgacat-gttcataagctgttttcaacttactttcttaagtcctc-aagttagcttatgaaaacagtttatagcttataca 769130  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    |||| || |||| |  |||||| |||| | ||||||||    
T  769129 aaaaaaaattaactttattttagcttttgttatagaaa 769092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 202 - 281
Target Start/End: Original strand, 20671920 - 20671999
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataatca 281  Q
    ||||||||| |||| |||||||||||||||||||| | |  ||||||||||| | | |||||| || |||||||||||||    
T  20671920 atgaaaacaatttaaagcttatacgaaaacaatttgactttattttatcttttgatctagaaatagcttatacataatca 20671999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 127 - 222
Target Start/End: Complemental strand, 31624179 - 31624085
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagctta 222  Q
    |||||||||||||| |||| ||||| |||||||||||||||| | || | ||||||||  | |||||| ||||  |||||||||| ||||||||||    
T  31624179 aacttatgaaaacagcttatgacat-gttcataagctgttttcaacttattttcataatttctccaagatagcctatgaaaacagcttatagctta 31624085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 127 - 185
Target Start/End: Original strand, 9912171 - 9912229
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataag 185  Q
    ||||||||||| || |||| |||||||||||||||||||||| |||| | |||||||||    
T  9912171 aacttatgaaaccagcttatgacattgttcataagctgttttgagcttattttcataag 9912229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 278
Target Start/End: Complemental strand, 12631632 - 12631551
Alignment:
Q  194 gttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||||||||||  ||| |||||||| ||||||||| ||||   ||||||||||| | |||||||| || ||||||||||    
T  12631632 gttagctaatgaaaacaacttacagcttataggaaaacaatctaat---attttatctttggttatagaaatagcttatacataa 12631551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Complemental strand, 1575984 - 1575928
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataa 184  Q
    ||||||||||||||||||| ||||| |||||||||||||||||| || | ||||||||    
T  1575984 aacttatgaaaacaacttatgacat-gttcataagctgtttttaacttattttcataa 1575928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 148 - 225
Target Start/End: Original strand, 9109252 - 9109329
Alignment:
Q  148 acattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatac 225  Q
    |||||||||||||| |||||| | || | ||||||| | | ||||| |||| |||||||||||| |||||||||||||    
T  9109252 acattgttcataagttgttttcaccttattttcataggttctccaaattagttaatgaaaacagcttatagcttatac 9109329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 177 - 274
Target Start/End: Original strand, 28621140 - 28621237
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatac 274  Q
    |||||||||||| ||||| ||||  ||| |||||  || |||||||||| |||||||||||| |  ||||||||||| | |||| ||||| |||||||    
T  28621140 tttcataagcttgccaagatagcctatgtaaacatcttgtagcttatacaaaaacaatttaactttattttatcttttgttataaaaacaatttatac 28621237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 696533 - 696486
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  696533 aaaacttatgaaaacagcttatgacat-gttcataagctgtttttagct 696486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 837246 - 837322
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatcttt 253  Q
    ||||||||| | |||||| ||||||||||||||   |||||||||| || |||||||||||| ||  ||||||||||    
T  837246 tttcataagttctccaagatagctaatgaaaactacttatagcttacaccaaaacaatttaactctgttttatcttt 837322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 235
Target Start/End: Original strand, 20368161 - 20368268
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||||||||||| |||| ||||||||||||  ||| | || | ||||||||| | ||||||  |||| |||||||||  ||||| || ||||     
T  20368161 aacttatgaaaacaacttatgaca-tgttcataagctagtttcaacttattttcataagttctccaagaaagcttatgaaaacaacttataactcataca 20368259  T
Q  227 aaaacaatt 235  Q
    |||||||||    
T  20368260 aaaacaatt 20368268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 32386089 - 32386176
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttata 217  Q
    |||||| ||||| ||||| |||| || |||||| |||||| |||| | |||||||||||||||| | || ||||||||||||| |||||    
T  32386089 cttatggaaacagcttacaacat-gtccataagttgttttcagcttactttcataagctttccaggataactaatgaaaacagcttata 32386176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 163 - 234
Target Start/End: Original strand, 28088238 - 28088309
Alignment:
Q  163 tgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaat 234  Q
    |||||| |||| | || ||| |||| |||| | ||||| ||||||||||||||||||||||| |||||||||    
T  28088238 tgttttgagcttatttccatgagctctccatgatagcttatgaaaacagtttatagcttatatgaaaacaat 28088309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 415369 - 415283
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    ||||||||| ||||||| ||||  ||| |||||| | ||||   ||||| || ||||||  ||||||||||||||||||||||||||    
T  415369 tgttcataatctgttttcagctttattccataagttctccactatagcttataaaaacaacttatagcttatacgaaaacaatttaa 415283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 168
Target Start/End: Original strand, 9559405 - 9559443
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttt 168  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  9559405 ttatgaaaacagcttacaacattgttcataagctgtttt 9559443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 246
Target Start/End: Original strand, 11784079 - 11784129
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattt 246  Q
    ||||| |||||||||| ||||||| ||||| |||||||||||||| |||||    
T  11784079 tagcttatgaaaacagcttatagcatatacaaaaacaatttaatttaattt 11784129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 24476623 - 24476541
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||| || ||||| | |||| ||||||| ||||| ||||||| |  ||||||||||| |||||||||| || ||||||||||    
T  24476623 tagcttatcaaaactgcttatcgcttatatgaaaataatttaactacattttatcttttgctatagaaatagcttatacataa 24476541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 278
Target Start/End: Original strand, 33787778 - 33787876
Alignment:
Q  180 cataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||| |||||| || || |||||||||| ||||| |||||| |||| |||||| | |   |||||| ||| | |||||||| |||||||||||||    
T  33787778 cataagctctccaagataacttatgaaaacagcttataacttatatgaaatcaatttgactttgttttatattttgttatagaaatagtttatacataa 33787876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 205 - 258
Target Start/End: Original strand, 3785758 - 3785811
Alignment:
Q  205 aaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgcta 258  Q
    ||||||| |||||||||||||||||||| ||||| |  ||||||||||| ||||    
T  3785758 aaaacagcttatagcttatacgaaaacagtttaactttattttatcttttgcta 3785811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 8183232 - 8183172
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttc 190  Q
    |||||||||||| ||||||| || ||||||||||||||||||||    ||||||||||||||    
T  8183232 cttatgaaaacagcttacgaaat-gttcataagctgtttttagcctgttttcataagctttc 8183172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 33089595 - 33089507
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttat 216  Q
    |||||||||||||| |||| ||||| ||| ||||| ||||||  ||| | ||||||| |||  ||||| ||||| |||||||||||||||    
T  33089595 aacttatgaaaacagcttaggacat-gtttataagttgttttacgcttattttcataggctccccaagatagcttatgaaaacagtttat 33089507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 196 - 264
Target Start/End: Complemental strand, 1403017 - 1402949
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    ||||| ||||||||| ||||||||||||| ||||| | ||||| |  ||||||||||| | ||||||||    
T  1403017 tagcttatgaaaacaatttatagcttatatgaaaatagtttaactttattttatcttttgttatagaaa 1402949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 183
Target Start/End: Original strand, 33832254 - 33832309
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcata 183  Q
    ||||||||||||||||||| |||| |||| ||||| ||||||||||| | |||||||    
T  33832254 aacttatgaaaacaacttatgaca-tgtttataagttgtttttagcttattttcata 33832309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 49; Significance: 6e-19; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 127 - 259
Target Start/End: Complemental strand, 33678870 - 33678738
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||||||||  ||||||||||| || |||||| | || | ||||| ||| |||||||| ||||| |||||||||| ||||||||| |||     
T  33678870 aacttatgaaaacaacttataacattgttcatgagatgttttcaacttattttcacaagttttccaagatagcttatgaaaacagcttatagcttttaca 33678771  T
Q  227 aaaacaatttaattcaattttatctttcgctat 259  Q
    ||||| |||||| |  | ||||||||| |||||    
T  33678770 aaaaccatttaactttactttatcttttgctat 33678738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 12110447 - 12110341
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaa 228  Q
    ||||||||||||||||| ||||| ||||| || |||||||||| | | ||||||||| | | |||| ||||| |||||||||| ||||||||||||| ||    
T  12110447 cttatgaaaacaacttatgacat-gttcacaaactgtttttagattattttcataagttcttcaagatagcttatgaaaacagcttatagcttataccaa 12110349  T
Q  229 aacaattt 236  Q
    ||||||||    
T  12110348 aacaattt 12110341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 264
Target Start/End: Original strand, 40688993 - 40689103
Alignment:
Q  154 ttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatcttt 253  Q
    ||||||||||||||| |||| | ||||||||| | |||| | ||||| ||||| |||| |||||||||||| ||||| ||||||| |  |||||||||||    
T  40688993 ttcataagctgttttgagcttattttcataagttatccaggatagcttatgaacacagcttatagcttatatgaaaataatttaactttattttatcttt 40689092  T
Q  254 cgctatagaaa 264  Q
     ||||||||||    
T  40689093 tgctatagaaa 40689103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 259
Target Start/End: Complemental strand, 39968010 - 39967878
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| | |||||||||||||||||||| | || | |||||| || | ||  || ||||| |||||||||  ||||||||  ||||    
T  39968010 aacttatgaaaacagcttatggcattgttcataagctgttttcaacttattttcattagttctctcagatagcttatgaaaacaacttatagctagtacg 39967911  T
Q  227 aaaacaatttaattcaattttatctttcgctat 259  Q
    |||||||||||| |  ||||||||||| |||||    
T  39967910 aaaacaatttaagtttattttatcttttgctat 39967878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 127 - 263
Target Start/End: Complemental strand, 30535652 - 30535517
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||||||||||| || || |||| ||||||||||| || | | ||||||| | | |  ||| ||||| ||| |||||| |||||| |||||||    
T  30535652 aacttatgaaaacaacttatgatat-gttcgtaagctgttttcaggttattttcatatgttctataagatagcttatggaaacagcttatagattatacg 30535554  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaa 263  Q
    |||||| || |||| |||||||||||| | |||||||    
T  30535553 aaaacacttcaatttaattttatcttttgttatagaa 30535517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 180 - 236
Target Start/End: Complemental strand, 30812185 - 30812129
Alignment:
Q  180 cataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaattt 236  Q
    |||||||| |||| | |||||||||||||||| ||||||||||||||||||||||||    
T  30812185 cataagctctccatgatagctaatgaaaacagcttatagcttatacgaaaacaattt 30812129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 278
Target Start/End: Complemental strand, 28165156 - 28165030
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatct 251  Q
    ||||||||||||||||| | || | || |||||||| |||| | ||||| || || |||||||||||||||||  |||||||||| | |  |||||||||    
T  28165156 tgttcataagctgttttcaacttatttccataagctctccatgatagcttataaagacagtttatagcttatattaaaacaatttgacttcattttatct 28165057  T
Q  252 ttcgctatagaaacagtttatacataa 278  Q
    || | |||||||| |  ||||||||||    
T  28165056 tttgttatagaaagaacttatacataa 28165030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 152 - 238
Target Start/End: Complemental strand, 39907868 - 39907782
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    ||||||| ||||||||| |||| | |||||| || | || ||| ||| | |||||||||||||||||||||||| ||||||||||||    
T  39907868 tgttcattagctgttttcagcttattttcattagttctctaagatagtttatgaaaacagtttatagcttatacaaaaacaatttaa 39907782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 267
Target Start/End: Complemental strand, 48507737 - 48507671
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaa-ttcaattttatctttcgctatagaaacag 267  Q
    |||||||||||||||||| ||||| |||||||||||| |||| | |||||||| |||||||||||||    
T  48507737 atgaaaacagtttatagcatatacaaaaacaatttaacttcattcttatcttttgctatagaaacag 48507671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 260
Target Start/End: Complemental strand, 20526536 - 20526403
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||||||  |||  ||||| ||| |||||||||||||||| | |||||| || | |||||  ||||| |||||||||| ||||||| | |||     
T  20526536 aacttatgaaaacagtttatcacatttttcgtaagctgtttttagcttattttcattagttctccaaaatagcttatgaaaacagcttatagcatgtaca 20526437  T
Q  227 aaaacaatttaattcaattttatctttcgctata 260  Q
    || | ||||||| |  ||||||||||| ||||||    
T  20526436 aacataatttaactttattttatcttttgctata 20526403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 127 - 264
Target Start/End: Complemental strand, 48470134 - 48469997
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    |||||||||||||| |||| | |||| |||||||||| |||| |||| |  |||||||| | | |||  ||||| |||||||||  |||||   |||||     
T  48470134 aacttatgaaaacagcttatggcatttttcataagcttttttgagcttatgttcataagttattcaaaatagcttatgaaaacaacttatattatataca 48470035  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    |||||||||||| | |||||||||||| ||| ||||||    
T  48470034 aaaacaatttaacttaattttatcttttgctgtagaaa 48469997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 152 - 236
Target Start/End: Complemental strand, 38010779 - 38010695
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaattt 236  Q
    |||||||||||||||||||||| | || |||||| | || | | ||| | |||||||||| |||||||||||| |||||||||||    
T  38010779 tgttcataagctgtttttagcttatttccataagttctctaggatagattatgaaaacagcttatagcttatatgaaaacaattt 38010695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 18350738 - 18350797
Alignment:
Q  178 ttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaattta 237  Q
    |||||||||| |||| | ||||| |||||||||| ||||| |||||||||||||||||||    
T  18350738 ttcataagctctccatgatagcttatgaaaacagcttataacttatacgaaaacaattta 18350797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 157 - 264
Target Start/End: Original strand, 22283754 - 22283860
Alignment:
Q  157 ataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgc 256  Q
    |||||||||||| |||| | || |||||| | || ||| | | | ||||||||||||||||||| |||| |||||||||||| |  ||||||||||| ||    
T  22283754 ataagctgttttcagcttatttccataagttctctaagatggtttatgaaaacagtttatagctgatacaaaaacaatttaactttattttatcttt-gc 22283852  T
Q  257 tatagaaa 264  Q
    ||||||||    
T  22283853 tatagaaa 22283860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 205 - 264
Target Start/End: Complemental strand, 30180063 - 30180004
Alignment:
Q  205 aaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    ||||||| |||||||||||||||||||||||||| |  ||||||||||| ||||| ||||    
T  30180063 aaaacagcttatagcttatacgaaaacaatttaactttattttatcttttgctatcgaaa 30180004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 202 - 264
Target Start/End: Original strand, 34083580 - 34083642
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    |||||||||| |||||||||||||  ||||||||||| |  ||||||||||| ||||||||||    
T  34083580 atgaaaacagcttatagcttatacacaaacaatttaactttattttatcttttgctatagaaa 34083642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 127 - 184
Target Start/End: Original strand, 15740392 - 15740448
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataa 184  Q
    ||||||||||||||||||| |||| ||||||||||||||||||| || | ||||||||    
T  15740392 aacttatgaaaacaacttatgaca-tgttcataagctgtttttaacttattttcataa 15740448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 173
Target Start/End: Complemental strand, 11047958 - 11047911
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    ||||||||| ||||||||||| ||||| |||||||||||||||||||||    
T  11047958 aaaacttataaaaacaacttatgacat-gttcataagctgtttttagct 11047911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 173
Target Start/End: Original strand, 43219783 - 43219830
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    |||||||||||||||| |||| ||||| |||||||||||||||||||||    
T  43219783 aaaacttatgaaaacagcttatgacat-gttcataagctgtttttagct 43219830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 177 - 253
Target Start/End: Original strand, 46104332 - 46104408
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatcttt 253  Q
    ||||||||| | | |||| || || ||||||||||||||||||||||||||||||| ||||  |  |||||||||||    
T  46104332 tttcataagttcttcaagataacttatgaaaacagtttatagcttatacgaaaacagtttagatttattttatcttt 46104408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 47177687 - 47177615
Alignment:
Q  166 ttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    |||||||| | ||||||||  | |||||| |||||  ||||||||| |||||||||||| |||||||||||||    
T  47177687 ttttagcttattttcataaattctccaagatagcttttgaaaacagcttatagcttatatgaaaacaatttaa 47177615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 7241314 - 7241357
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttt 168  Q
    ||||||||||||||| ||||| ||||||||||||||| ||||||    
T  7241314 aaaacttatgaaaacgacttatgacattgttcataagttgtttt 7241357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 125 - 232
Target Start/End: Original strand, 25670565 - 25670671
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttata 224  Q
    ||||||||||||||||||||| |||| |||| ||||  |||||| |||| | ||||| ||||| |||||| ||  | || |||||| || ||||||||||    
T  25670565 aaaacttatgaaaacaacttatgaca-tgttaataaattgttttcagcttattttcacaagctctccaagatatgttataaaaacaattgatagcttata 25670663  T
Q  225 cgaaaaca 232  Q
     |||||||    
T  25670664 tgaaaaca 25670671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 125 - 168
Target Start/End: Original strand, 44989655 - 44989698
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttt 168  Q
    ||||||||||||||||||||  ||||||||||| ||||||||||    
T  44989655 aaaacttatgaaaacaacttctgacattgttcacaagctgtttt 44989698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 196 - 278
Target Start/End: Complemental strand, 1417285 - 1417203
Alignment:
Q  196 tagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||| |||||||||  |||| ||||||| ||||||||||| | |  ||||||||||| | |||| ||| |||||||||||||    
T  1417285 tagcttatgaaaacaacttattgcttatatgaaaacaatttgactttattttatcttttgttatataaatagtttatacataa 1417203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 46825136 - 46825062
Alignment:
Q  179 tcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatcttt 253  Q
    ||||||||  |||||| ||||| |||||||| |||||| ||||||| ||||||||||| | |  |||||||||||    
T  46825136 tcataagcactccaagatagcttatgaaaacggtttatggcttatatgaaaacaatttgactttattttatcttt 46825062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 753029 - 752956
Alignment:
Q  157 ataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaa 230  Q
    ||||||||||||||||| | ||||||| |||  ||||| ||| | || ||||||| ||||||||||||| ||||    
T  753029 ataagctgtttttagctaattttcatatgctccccaagatagtttatcaaaacagcttatagcttatacaaaaa 752956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 219
Target Start/End: Original strand, 11619141 - 11619230
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagc 219  Q
    |||||||||||||||| |||| | |||||||||| |||| | || ||||||||||| | |||||  ||||| || |||||| || |||||    
T  11619141 ttatgaaaacaacttatgacaattttcataagcttttttcaacttaatttcataagttctccaacgtagcttataaaaacaattgatagc 11619230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 260
Target Start/End: Original strand, 30570911 - 30571044
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||| |||||||| |||| |||| | |||||||||| |||| |  | ||||||||||| | |||||  ||| | || |||| || ||||||| |||||     
T  30570911 aacttgtgaaaacagcttatgacaattttcataagcttttttcatgttaatttcataagttctccaatgtaggttataaaaatagcttatagcatataca 30571010  T
Q  227 aaaacaatttaattcaattttatctttcgctata 260  Q
    |||| ||||||| |  |||||| |||||||||||    
T  30571011 aaaataatttaactttattttacctttcgctata 30571044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 33645944 - 33646035
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagctta 222  Q
    |||||| |||||||||| ||||| ||  ||||| ||||||||| | | || |||||||| |||| | ||||| |||||||||||||||||||||    
T  33645944 cttatggaaacaacttatgacat-gtctataagttgtttttaggttatttccataagctctcca-gatagcttatgaaaacagtttatagctta 33646035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 168
Target Start/End: Complemental strand, 34036007 - 34035966
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttt 168  Q
    |||||||||||| |||||| ||||||||||||||| ||||||    
T  34036007 aacttatgaaaataacttatgacattgttcataagttgtttt 34035966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 275
Target Start/End: Original strand, 37832195 - 37832267
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttataca 275  Q
    ||||||| || |||||||||| ||||||||||| ||| |  ||||||| ||| |||||||||| ||||||||||    
T  37832195 atgaaaaaagcttatagctta-acgaaaacaatctaactttattttatattttgctatagaaatagtttataca 37832267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 47795970 - 47795896
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||||||||||||||||  |||||||||||| | |||||   |||| | |||||||| || ||||||||||    
T  47795970 atgaaaacagtttatagcttatataaaaacaatttaacttaattt--acttttgatatagaaataggttatacataa 47795896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 25635555 - 25635591
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagct 163  Q
    ||||||||||||||||||| || ||||||||||||||    
T  25635555 aacttatgaaaacaacttatgatattgttcataagct 25635591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 278
Target Start/End: Complemental strand, 30496707 - 30496643
Alignment:
Q  214 tatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||| ||||||||||||||||| | |  ||||||| ||| | |||||||| |||||||||||||    
T  30496707 tataggttatacgaaaacaatttgactttattttatattttgttatagaaatagtttatacataa 30496643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 49; Significance: 6e-19; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 125 - 277
Target Start/End: Complemental strand, 3155695 - 3155543
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttata 224  Q
    |||| |||||| ||||||||| | |||||||| ||| ||||||| |||| | |||||| || | | |||| ||| | |||||||||| || |||||| ||    
T  3155695 aaaatttatgagaacaacttatggcattgttcgtaaactgttttcagcttattttcattagttcttcaagatagtttatgaaaacagcttgtagcttgta 3155596  T
Q  225 cgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacata 277  Q
    | |||||||||||| |  ||||||||||| |||||||||| || |||||||||    
T  3155595 caaaaacaatttaactttattttatcttttgctatagaaatagcttatacata 3155543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 253
Target Start/End: Original strand, 52746825 - 52746946
Alignment:
Q  131 tatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaa 230  Q
    |||| ||||| |||| ||||| |||||||||||||||| |||| | |||||||||| || |||| ||||| |||||||||| |||| ||||| || ||||    
T  52746825 tatggaaacagcttaagacat-gttcataagctgttttcagctgattttcataagccttacaagatagcttatgaaaacagcttatggcttacacaaaaa 52746923  T
Q  231 caatttaattcaattttatcttt 253  Q
    |||||||| |  |||||||||||    
T  52746924 caatttaactttattttatcttt 52746946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 130 - 235
Target Start/End: Complemental strand, 1706709 - 1706604
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    ||||||||||| |||| | ||||||||||||||| |||  | || | ||||||||||| |||||| ||| | |||||||||| ||||||||| |||||||    
T  1706709 ttatgaaaacagcttatggcattgttcataagctatttccaacttattttcataagctgtccaagatagtttatgaaaacagcttatagcttctacgaaa 1706610  T
Q  230 acaatt 235  Q
    ||||||    
T  1706609 acaatt 1706604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 156 - 278
Target Start/End: Original strand, 30338600 - 30338723
Alignment:
Q  156 cataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaa-cagtttatagcttatacgaaaacaatttaattcaattttatctttc 254  Q
    |||||||||||||  ||| | |||||||| || ||||||  |||| ||||||| |||||||||||||||| ||||||| ||||| |  ||| |||||||     
T  30338600 cataagctgttttatgcttattttcataaactctccaagagagcttatgaaaaacagtttatagcttatatgaaaacagtttaactttattctatctttt 30338699  T
Q  255 gctatagaaacagtttatacataa 278  Q
    | |||||||| |||||||||||||    
T  30338700 gttatagaaatagtttatacataa 30338723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 152 - 264
Target Start/End: Complemental strand, 17884133 - 17884021
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatct 251  Q
    |||||||||| |||||| |||| | ||||||||||| |||||  ||||| |||||||||  | ||| ||||||| |||||||||||| |  |||||||||    
T  17884133 tgttcataagttgttttcagctaattttcataagctctccaatatagcttatgaaaacaactgataacttatacaaaaacaatttaactttattttatct 17884034  T
Q  252 ttcgctatagaaa 264  Q
    || | ||||||||    
T  17884033 tttgttatagaaa 17884021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 314 - 386
Target Start/End: Original strand, 20109817 - 20109889
Alignment:
Q  314 aattcacctttgcatcattacgaacaaattggattccatgtccaggatacacagttgaagaacaaaaccaaca 386  Q
    |||| ||||| ||||||||||||||||| ||||| ||||| |||||||| ||||| |||||||| ||||||||    
T  20109817 aatttaccttagcatcattacgaacaaactggatcccatgaccaggatatacagtagaagaacagaaccaaca 20109889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 134 - 264
Target Start/End: Complemental strand, 1408040 - 1407909
Alignment:
Q  134 gaaaacaacttacgacattgttcataagctgttttt-agctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaaca 232  Q
    ||||||| |||| |||||| |||||||||||||||| |||| |  |||||||  ||||| || ||||| |||||||||| ||  |||||| || ||||||    
T  1408040 gaaaacagcttatgacatttttcataagctgtttttcagcttatcttcataaattttcctagatagcttatgaaaacagcttgcagcttacacaaaaaca 1407941  T
Q  233 atttaattcaattttatctttcgctatagaaa 264  Q
    |||||| || |||||||  || ||||||||||    
T  1407940 atttaactctattttattatttgctatagaaa 1407909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 20031831 - 20031720
Alignment:
Q  136 aaacaacttacgacattgttcataagctgttttt-agctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaat 234  Q
    ||||| |||| | ||||||| ||||||||||||| |||||| ||||||||| | || ||  ||||| |||||||| | |||||||||| | |||||||||    
T  20031831 aaacagcttatggcattgttgataagctgtttttcagctcattttcataagttctctaaaatagcttatgaaaactgcttatagcttacatgaaaacaat 20031732  T
Q  235 ttaattcaattt 246  Q
    |||||| |||||    
T  20031731 ttaatttaattt 20031720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 202 - 264
Target Start/End: Complemental strand, 47946213 - 47946151
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    ||||||||| ||||||||||||||||||||||||||| |  |||||||||| || ||||||||    
T  47946213 atgaaaacaatttatagcttatacgaaaacaatttaacttcattttatcttacgttatagaaa 47946151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 26520295 - 26520360
Alignment:
Q  213 ttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||| ||||||||||||||| |  |||| |||||| | ||||||||||||||||||||||    
T  26520295 ttatagcttacacgaaaacaatttaactttatttcatcttttgttatagaaacagtttatacataa 26520360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 278
Target Start/End: Complemental strand, 44138651 - 44138498
Alignment:
Q  125 aaaacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttata 224  Q
    |||||||||||| | |||||| |||||| |||| ||||  |||| |||| | ||||||||| | |||||  | | | |||||||||  ||| ||  ||||    
T  44138651 aaaacttatgaagataacttatgacattattcacaagcaattttcagcttattttcataagttctccaacatggtttatgaaaacaaattacaggctata 44138552  T
Q  225 cgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||| |||||||| |  ||||||||||  ||||||||||||| ||||||||||    
T  44138551 cgaaagcaatttaactttattttatcttctgctatagaaacagcttatacataa 44138498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 202 - 278
Target Start/End: Complemental strand, 25885874 - 25885798
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||  |||||||||| ||||||||||||||| |  ||||||||||| |||||||||| || | ||||||||    
T  25885874 atgaaaacaacttatagcttacacgaaaacaatttaactttattttatcttttgctatagaaagagctaatacataa 25885798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 130 - 238
Target Start/End: Original strand, 28300283 - 28300390
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    ||||||||||| | || ||||| |||| |||| |||||| | || | ||||||||||| | |||| ||||  ||||||| |||||||||||||||| |||    
T  28300283 ttatgaaaacagcctatgacat-gttcttaagttgttttcaacttattttcataagctcttcaagatagcctatgaaaatagtttatagcttatacaaaa 28300381  T
Q  230 acaatttaa 238  Q
    |||||||||    
T  28300382 acaatttaa 28300390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 202 - 278
Target Start/End: Original strand, 45128365 - 45128441
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    ||||||||| ||||||||||||| || || ||||| |||  ||||||||||| | |||||||| |||||||||||||    
T  45128365 atgaaaacaatttatagcttatatgagaataatttgatttgattttatcttttgttatagaaatagtttatacataa 45128441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 129 - 236
Target Start/End: Complemental strand, 2996660 - 2996554
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaa 228  Q
    ||||||||||||||||| |||| ||| |||||||| |||| | || | ||||||| ||| |||||| ||||| |||||||||  ||||| ||||||  ||    
T  2996660 cttatgaaaacaacttatgaca-tgtccataagcttttttcaacttattttcatacgctctccaagatagcttatgaaaacaacttataacttatataaa 2996562  T
Q  229 aacaattt 236  Q
    ||||||||    
T  2996561 aacaattt 2996554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 189 - 236
Target Start/End: Original strand, 19395158 - 19395205
Alignment:
Q  189 tccaagttagctaatgaaaacagtttatagcttatacgaaaacaattt 236  Q
    |||||| ||||||||||||||| |||||||||||||| ||||||||||    
T  19395158 tccaagatagctaatgaaaacattttatagcttatacaaaaacaattt 19395205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 128 - 277
Target Start/End: Complemental strand, 49803297 - 49803151
Alignment:
Q  128 acttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacga 227  Q
    |||||||||| ||||||| |||||||||||| ||||||||| |||| | | || |||| | ||||||  |||| || ||||||   || | |||||  ||    
T  49803297 acttatgaaagcaacttatgacattgttcattagctgttttcagcttattgtcttaagttctccaagaaagcttatcaaaaca---tacaacttatgtga 49803201  T
Q  228 aaacaatttaattcaattttatctttcgctatagaaacagtttatacata 277  Q
    ||||||||||| |  ||||||||||| |||||||||| |  |||||||||    
T  49803200 aaacaatttaacttcattttatcttttgctatagaaataacttatacata 49803151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 202 - 270
Target Start/End: Complemental strand, 23459643 - 23459575
Alignment:
Q  202 atgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagttt 270  Q
    |||||||||| |||||||||||| |||||||| |||| |  ||||||||||| |||||| ||| |||||    
T  23459643 atgaaaacagcttatagcttataagaaaacaacttaacttcattttatcttttgctataaaaatagttt 23459575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 253
Target Start/End: Original strand, 55414406 - 55414526
Alignment:
Q  133 tgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaaca 232  Q
    |||||||| |||| |||||| |||||||||| |||| | || | ||||||||| | |||||| || || ||||||||| |||||||| ||| | |||| |    
T  55414406 tgaaaacagcttatgacatttttcataagcttttttcaacttattttcataagttctccaagataacttatgaaaacaatttatagcatatgcaaaaaaa 55414505  T
Q  233 atttaattcaattttatcttt 253  Q
    | |||| |  |||||||||||    
T  55414506 aattaactttattttatcttt 55414526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 35571619 - 35571718
Alignment:
Q  135 aaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaat 234  Q
    |||||| ||||  ||| ||||||| ||||| ||| | || | ||||| ||| | || ||| ||||| |||||||||| ||||||||||||||||||||||    
T  35571619 aaaacagcttattacactgttcatgagctggtttcaacttattttcacaagttctctaagatagcttatgaaaacagcttatagcttatacgaaaacaat 35571718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 153 - 260
Target Start/End: Complemental strand, 51630175 - 51630068
Alignment:
Q  153 gttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctt 252  Q
    |||| |||| |||||| |||| | ||||||||  | | |||| ||||| ||||||| || ||||||||||||  |||||||||||| |  ||||||||||    
T  51630175 gttcgtaagatgttttcagcttattttcataaattcttcaagatagcttatgaaaatagcttatagcttatatcaaaacaatttaactttattttatctt 51630076  T
Q  253 tcgctata 260  Q
    | ||||||    
T  51630075 ttgctata 51630068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 130 - 236
Target Start/End: Original strand, 7839344 - 7839450
Alignment:
Q  130 ttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaa 229  Q
    |||||||||||||||| |||| | |||||||||| |||| | || | |||| |||| | | |||  ||||| || |||||| |||||||| ||||| |||    
T  7839344 ttatgaaaacaacttatgacaattttcataagcttttttcaacttattttcgtaagttcttcaatctagcttataaaaacaatttatagcatatacaaaa 7839443  T
Q  230 acaattt 236  Q
    |||||||    
T  7839444 acaattt 7839450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 152 - 234
Target Start/End: Original strand, 30066771 - 30066853
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaat 234  Q
    ||||||||| ||||||| ||||   ||| ||||||| |||||| ||||| |||| ||||| ||| || |||||||||||||||    
T  30066771 tgttcataatctgttttcagcttgtttttataagctctccaagatagcttatgagaacagcttacagtttatacgaaaacaat 30066853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 278
Target Start/End: Original strand, 49004038 - 49004101
Alignment:
Q  213 ttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||| |||||||||||||||||  | ||||||||||| ||||||||||  | ||||||||||    
T  49004038 ttatagctaatacgaaaacaatttaa--ctattttatcttttgctatagaaattgcttatacataa 49004101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 278
Target Start/End: Complemental strand, 49202714 - 49202584
Alignment:
Q  148 acattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaattcaatttt 247  Q
    |||||||||||||| |||||| | || | |||||| || | |||||| ||||| | |||||||  |||||||||||||  |||||||| || ||  ||||    
T  49202714 acattgttcataagttgttttcaacttattttcattagttatccaagatagcttacgaaaacaacttatagcttataccgaaacaattaaaatctgtttt 49202615  T
Q  248 atctttcgctatagaaacagtttatacataa 278  Q
    | ||||   |||||||| || ||||||||||    
T  49202614 accttttattatagaaatagcttatacataa 49202584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 49939931 - 49939977
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    |||||||||||| | |||| |||||||||||||||||||||| ||||    
T  49939931 aacttatgaaaagagcttatgacattgttcataagctgttttcagct 49939977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 170
Target Start/End: Complemental strand, 1966028 - 1965988
Alignment:
Q  129 cttatgaaaacaacttacgacattgttcataagctgttttta 170  Q
    ||||||||||||||||| ||||| ||||||||||||||||||    
T  1966028 cttatgaaaacaacttatgacat-gttcataagctgttttta 1965988  T

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Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 236
Target Start/End: Complemental strand, 20907361 - 20907328
Alignment:
Q  203 tgaaaacagtttatagcttatacgaaaacaattt 236  Q
    |||||||||||||||||||||| |||||||||||    
T  20907361 tgaaaacagtttatagcttatatgaaaacaattt 20907328  T

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Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 203 - 264
Target Start/End: Complemental strand, 28232559 - 28232498
Alignment:
Q  203 tgaaaacagtttatagcttatacgaaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    ||||| |||||||||||||||| | ||| ||||| |||  ||||||||||| ||||||||||    
T  28232559 tgaaagcagtttatagcttatatggaaataatttgatttgattttatcttttgctatagaaa 28232498  T

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Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 264
Target Start/End: Original strand, 47118946 - 47119082
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacg 226  Q
    ||||||||||||||||| | ||||||||| ||  | |||||| |||| |  |||||||| | | |||| ||||  ||||| |||  |||||||||||| |    
T  47118946 aacttatgaaaacaactcatgacattgtt-attggttgttttcagcttatcttcataagttcttcaagatagcatatgaatacaacttatagcttatatg 47119044  T
Q  227 aaaacaatttaattcaattttatctttcgctatagaaa 264  Q
    |||||||||||| |   |||||||||| | ||||||||    
T  47119045 aaaacaatttaactttgttttatcttttgatatagaaa 47119082  T

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Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 189 - 234
Target Start/End: Original strand, 49940033 - 49940078
Alignment:
Q  189 tccaagttagctaatgaaaacagtttatagcttatacgaaaacaat 234  Q
    |||||| ||||| |||||||||| | ||||||||||||||||||||    
T  49940033 tccaagatagcttatgaaaacagctaatagcttatacgaaaacaat 49940078  T

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Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 50298567 - 50298506
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    ||||||||| |||||||| | ||| |||||||| | |||||||||||  |||||||||||||    
T  50298567 tttcataagttttccaagatggcttatgaaaactgattatagcttatgtgaaaacaatttaa 50298506  T

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Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 53673667 - 53673728
Alignment:
Q  156 cataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttata 217  Q
    |||||| |||||| |||| | || |||||||| |||||| ||||| ||||||||||||||||    
T  53673667 cataagttgttttcagcttatttacataagctctccaagatagcttatgaaaacagtttata 53673728  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 177 - 238
Target Start/End: Complemental strand, 56480388 - 56480327
Alignment:
Q  177 tttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaatttaa 238  Q
    ||||||||||| |||||| ||| | |||||||||| ||||| |||||||  |||||||||||    
T  56480388 tttcataagctctccaagatagtttatgaaaacagcttataacttatacataaacaatttaa 56480327  T

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Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 127 - 210
Target Start/End: Complemental strand, 2703117 - 2703033
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgttttt-agctcaatttcataagctttccaagttagctaatgaaaaca 210  Q
    |||||| ||||||| ||| | |||||||||||||||||||||| |||| | ||||||||| | |||  | ||| |||||||||||    
T  2703117 aacttacgaaaacagcttgcaacattgttcataagctgtttttcagcttattttcataagttctccgggatagttaatgaaaaca 2703033  T

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Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 152 - 232
Target Start/End: Original strand, 7694015 - 7694095
Alignment:
Q  152 tgttcataagctgtttttagctcaatttcataagctttccaagttagctaatgaaaacagtttatagcttatacgaaaaca 232  Q
    |||||||||| |||||| |||| | || ||||| || |||| | || || |||||||||| ||||||||||||| ||||||    
T  7694015 tgttcataagttgttttcagcttatttccataaactctccaggataacttatgaaaacagcttatagcttatacaaaaaca 7694095  T

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Target: scaffold0044 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 51985 - 52039
Alignment:
Q  182 taagctttccaagttagctaatgaaaacagtttatagcttatacgaaaacaattt 236  Q
    |||| |||||||| || ||||||||||||| |||||||||||| |||||||||||    
T  51985 taagttttccaagataactaatgaaaacagcttatagcttatatgaaaacaattt 52039  T

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Target: scaffold0608 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 173
Target Start/End: Original strand, 9618 - 9663
Alignment:
Q  127 aacttatgaaaacaacttacgacattgttcataagctgtttttagct 173  Q
    |||||||||||||||||||  |||| |||||||||||||||||||||    
T  9618 aacttatgaaaacaacttattacat-gttcataagctgtttttagct 9663  T

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Target: scaffold0024 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 21348 - 21409
Alignment:
Q  217 agcttatacgaaaacaatttaattcaattttatctttcgctatagaaacagtttatacataa 278  Q
    |||||||||||||||||||||| |  |||||||||||  ||||| ||| || ||||||||||    
T  21348 agcttatacgaaaacaatttaactttattttatcttttcctataaaaatagcttatacataa 21409  T

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