View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6722_high_11 (Length: 343)
Name: NF6722_high_11
Description: NF6722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6722_high_11 |
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Alignment Details
Target: chr8 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 67 - 337
Target Start/End: Complemental strand, 31771201 - 31770931
Alignment:
| Q |
67 |
gcttcaactagagttacatcattcacaggcaaatatggatataaatcagtgtgagttcattcaacgcttactagatgtcacaaatttcgccgcttattct |
166 |
Q |
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| T |
31771201 |
gcttcaactagagttacatcattcacaggcaaatatggatataaatcagtgtgagttcattcaacgcttactagatgtcacaaatttcgccgcttattct |
31771102 |
T |
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| Q |
167 |
cttccagagaagttatcacctgaagataactaccagattgtagaatacagtaacaacagtcattctgatgccaatggcagcaaaggtcattcttctaatg |
266 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31771101 |
cttccagagaagttatcacctgaagataactaccagattgtagaatacagtaacaacagtcattctgatgccaatggcagcaaaggtcattcttctaatg |
31771002 |
T |
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| Q |
267 |
aaaaacaccatnnnnnnngtgatattctttcatcatcaaggtagttcatttccctcttctccaacttttct |
337 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31771001 |
aaaaacaccataaaaaaagtgatattctttcatcatcaaggtagttcatttccctcttctccaacttttct |
31770931 |
T |
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