View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF6722_high_14 (Length: 311)
Name: NF6722_high_14
Description: NF6722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6722_high_14 |
 | |
|
| [»] scaffold0156 (1 HSPs) |
| | |
|
| [»] scaffold0111 (1 HSPs) |
| | |
|
| [»] scaffold0209 (1 HSPs) |
| | |
|
| [»] scaffold0083 (1 HSPs) |
| | |
|
| [»] scaffold0632 (1 HSPs) |
| | |
|
| [»] scaffold0002 (1 HSPs) |
| | |
|
| [»] scaffold0497 (1 HSPs) |
| | |
|
| [»] scaffold0173 (1 HSPs) |
| | |
|
| [»] scaffold0016 (1 HSPs) |
| | |
|
| [»] scaffold0431 (1 HSPs) |
| | |
|
| [»] scaffold0039 (1 HSPs) |
| | |
|
| [»] scaffold0222 (1 HSPs) |
| | |
|
| [»] scaffold0027 (2 HSPs) |
| | |
|
| [»] scaffold0315 (1 HSPs) |
| | |
|
| [»] scaffold0170 (1 HSPs) |
| | |
|
| [»] scaffold0290 (1 HSPs) |
| | |
|
| [»] scaffold0048 (1 HSPs) |
| | |
|
| [»] scaffold0007 (1 HSPs) |
| | |
|
| [»] scaffold1380 (1 HSPs) |
| | |
|
Alignment Details
Target: chr8 (Bit Score: 102; Significance: 1e-50; HSPs: 13)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 17683822 - 17683697
Alignment:
| Q |
2 |
cccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaatc |
101 |
Q |
| |
|
||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
17683822 |
cccattttattcgtatttttagagtcgggaattttcgtcgtttcagacgaaattttgacaaagaagttactttgaagtacctcattttttattccgagtc |
17683723 |
T |
|
| Q |
102 |
agacccttctctttcccattattttc |
127 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
17683722 |
ggacccttctctttcccattattttc |
17683697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 17664666 - 17664541
Alignment:
| Q |
2 |
cccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaatc |
101 |
Q |
| |
|
||||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| || |
|
|
| T |
17664666 |
cccattttattcgtatttttagagtcgggaattttcatcgtttcagacgaaattttgacaaagaagttactttgaagtacctcattttttattccgagtc |
17664567 |
T |
|
| Q |
102 |
agacccttctctttcccattattttc |
127 |
Q |
| |
|
||||||||||||||||||||||||| |
|
|
| T |
17664566 |
ggacccttctctttcccattattttc |
17664541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 39837589 - 39837482
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
39837589 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactttgaagtacctcattttttattccgagt |
39837490 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
39837489 |
cggaccct |
39837482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 17973603 - 17973700
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
17973603 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcagagaggttactttgaagtacctcattttttattccga |
17973700 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 25579839 - 25579742
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25579839 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccga |
25579742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 39845632 - 39845541
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttttta |
92 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
39845632 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactttgaagtacctcatttttta |
39845541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 5 - 97
Target Start/End: Complemental strand, 4839805 - 4839713
Alignment:
| Q |
5 |
attttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccg |
97 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| |||||| |
|
|
| T |
4839805 |
attttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaagaagttactttgaagtacctcatttttgattccg |
4839713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 30938320 - 30938427
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
30938320 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
30938419 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
30938420 |
cggaccct |
30938427 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1407100 - 1406993
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
1407100 |
acccattttattcgtatttttaaagttgtgaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
1407001 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
1407000 |
cggaccct |
1406993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26873631 - 26873541
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttttt |
91 |
Q |
| |
|
||||||||||||||||||| ||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||| ||||||| |
|
|
| T |
26873631 |
acccattttattcgtatttgtaatgtcggaaattttcgtcgtttcagacgaaatttcgacaaagaggttactttaaagtaccttatttttt |
26873541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26876081 - 26875991
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttttt |
91 |
Q |
| |
|
||||||||||||||||||||||| ||||| |||||| |||||||||||||||||||| |||||||||||||||| || ||||||||||||| |
|
|
| T |
26876081 |
acccattttattcgtatttttaatgtcggaaatttttgtcgtttcagacgaaatttcgacaaagaggttactttaaaatacctcatttttt |
26875991 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 17664444 - 17664393
Alignment:
| Q |
224 |
ctgtacaatgttgtcaataagtccgaaggttttcggcagtggtccaaatttc |
275 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17664444 |
ctgtacaatgttgtcaataagtccgaaggttttctgcagtggtccaaatttc |
17664393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 224 - 275
Target Start/End: Complemental strand, 17683600 - 17683549
Alignment:
| Q |
224 |
ctgtacaatgttgtcaataagtccgaaggttttcggcagtggtccaaatttc |
275 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
17683600 |
ctgtacaatgttgtcaataagtccgaaggttttctgcagtggtccaaatttc |
17683549 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 99; Significance: 7e-49; HSPs: 21)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 20621556 - 20621682
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||||| || | |
|
|
| T |
20621556 |
acccattttattcgtgtttttgaagtcgggaattttcgtcgtttcagacaaaatttcgacaaagatgttactttgaagtacctcattttttattctgagt |
20621655 |
T |
|
| Q |
101 |
cagacccttctctttcccattattttc |
127 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
20621656 |
cagacccttctctttcccattattttc |
20621682 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 2 - 127
Target Start/End: Complemental strand, 20372339 - 20372214
Alignment:
| Q |
2 |
cccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctca-ttttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| ||||||||||||| | |
|
|
| T |
20372339 |
cccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgacaaa-aggttactttgaagtacctcatttttttattccgagt |
20372241 |
T |
|
| Q |
101 |
cagacccttctctttcccattattttc |
127 |
Q |
| |
|
| ||||||||||||||||||||||||| |
|
|
| T |
20372240 |
cggacccttctctttcccattattttc |
20372214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35037894 - 35038001
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||||| |||||||||||||||||||| | |
|
|
| T |
35037894 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgatagagaggttactttgaaatacctcattttttattccgagt |
35037993 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
||| |||| |
|
|
| T |
35037994 |
caggccct |
35038001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14582963 - 14583070
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
14582963 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
14583062 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
14583063 |
cggaccct |
14583070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15944584 - 15944477
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
15944584 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
15944485 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
15944484 |
cggaccct |
15944477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 15953099 - 15952992
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
15953099 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
15953000 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
15952999 |
cggaccct |
15952992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35138631 - 35138738
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
35138631 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
35138730 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
35138731 |
cggaccct |
35138738 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 35146967 - 35147074
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
35146967 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
35147066 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
35147067 |
cggaccct |
35147074 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 38168384 - 38168277
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
38168384 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
38168285 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
38168284 |
cggaccct |
38168277 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 41233871 - 41233764
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
41233871 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
41233772 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
41233771 |
cggaccct |
41233764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42565956 - 42565849
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
42565956 |
acccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
42565857 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
42565856 |
cggaccct |
42565849 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 42574580 - 42574473
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
42574580 |
acccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
42574481 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
42574480 |
cggaccct |
42574473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 44372743 - 44372814
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttact |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
44372743 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcgacaaagaggttact |
44372814 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 44388654 - 44388725
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttact |
72 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| |
|
|
| T |
44388654 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttaagacgaaatttcgacaaagaggttact |
44388725 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 17687425 - 17687369
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttc |
57 |
Q |
| |
|
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
17687425 |
acccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttc |
17687369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 224 - 275
Target Start/End: Original strand, 20621788 - 20621839
Alignment:
| Q |
224 |
ctgtacaatgttgtcaataagtccgaaggttttcggcagtggtccaaatttc |
275 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20621788 |
ctgtacaatgttgtcaataagtccgaaggttttcggcagtggtccaaatttc |
20621839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 25483641 - 25483712
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttacttt |
74 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||||||| |
|
|
| T |
25483641 |
ccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacagagaggttacttt |
25483712 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 25491247 - 25491318
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttacttt |
74 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||||||||||||||||||||||| || ||| |||||||||||| |
|
|
| T |
25491247 |
ccattttatttgtatttttaaagtcgagaattttcgtcgtttcagacgaaatctcgacagagaggttacttt |
25491318 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 35303775 - 35303862
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
|||| |||||||| |||||| |||| | ||| |||||||||||||||||||||||| || |||||||| ||||||||||||||||| |
|
|
| T |
35303775 |
accccttttattcttattttaaaagccaagaaatttcgtcgtttcagacgaaatttcggcagagaggttaatttgaagtacctcattt |
35303862 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 18989389 - 18989312
Alignment:
| Q |
12 |
tcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
|||| ||||||||| |||||||||| |||| |||||||||||| | | |||||||||||| |||||||||||||| |
|
|
| T |
18989389 |
tcgtctttttaaagccgggaatttttgtcgcatcagacgaaattacggtagagaggttactttcaagtacctcatttt |
18989312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 27606667 - 27606616
Alignment:
| Q |
5 |
attttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttc |
57 |
Q |
| |
|
|||||||||||| |||||||| |||||||||| ||||| |||||||||||||| |
|
|
| T |
27606667 |
attttattcgtacttttaaagacgggaatttt-gtcgtctcagacgaaatttc |
27606616 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 96; Significance: 4e-47; HSPs: 13)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 27343718 - 27343611
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | |
|
|
| T |
27343718 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacagagaggttactttgaagtacctcattttttattccgagt |
27343619 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
27343618 |
cggaccct |
27343611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 4523705 - 4523600
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaatca |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
4523705 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactttgaagtacctcattttttattccgagtcg |
4523606 |
T |
|
| Q |
103 |
gaccct |
108 |
Q |
| |
|
|||||| |
|
|
| T |
4523605 |
gaccct |
4523600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12996514 - 12996621
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||| | |
|
|
| T |
12996514 |
acccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggtagagaggttactttgaagtacctcattttttattccgagt |
12996613 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
||| |||| |
|
|
| T |
12996614 |
cagtccct |
12996621 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8094309 - 8094212
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8094309 |
acccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactttgaagtacctcatttttgattccga |
8094212 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 8103115 - 8103018
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
8103115 |
acccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactttgaagtacctcatttttgattccga |
8103018 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 21532329 - 21532224
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaatca |
102 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||| || || |
|
|
| T |
21532329 |
ccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcgacaaa-agattactttgaagtacctcattttttattctgagtcg |
21532231 |
T |
|
| Q |
103 |
gaccctt |
109 |
Q |
| |
|
||||||| |
|
|
| T |
21532230 |
gaccctt |
21532224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 52295642 - 52295732
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttttt |
91 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || |||| |||||||||||||||||||||||| |
|
|
| T |
52295642 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggcagagagattactttgaagtacctcatttttt |
52295732 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 12428505 - 12428418
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
||||||||||||||||||||||||| | | ||||||||| |||||||||||||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
12428505 |
acccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacgaagagtttactttgaagtacctcattt |
12428418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 6 - 89
Target Start/End: Original strand, 33188808 - 33188891
Alignment:
| Q |
6 |
ttttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
||||||| |||||||||||| | ||||||||||||||||||||||||||||| ||| ||||||||||||| ||||||||||| |
|
|
| T |
33188808 |
ttttatttgtatttttaaagctgagaattttcgtcgtttcagacgaaatttcagcaagaaggttactttgaattacctcatttt |
33188891 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 63 - 108
Target Start/End: Original strand, 10638406 - 10638451
Alignment:
| Q |
63 |
agaggttactttgaagtacctcattttttattccgaatcagaccct |
108 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| || |||||| |
|
|
| T |
10638406 |
agaggttactttgaagtacctcattttttattccgagtcggaccct |
10638451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 12402907 - 12402946
Alignment:
| Q |
18 |
ttttaaagtcgggaattttcgtcgtttcagacgaaatttc |
57 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
12402907 |
ttttaaagtcaggaattttcgtcgtttcagacgaaatttc |
12402946 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 35 - 88
Target Start/End: Original strand, 3424403 - 3424454
Alignment:
| Q |
35 |
ttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
||||||||| ||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
3424403 |
ttcgtcgttccagacgaaatttcggca--gaggttactttgaagtacctcattt |
3424454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Complemental strand, 25249644 - 25249599
Alignment:
| Q |
42 |
tttcagacgaaatttcaacaaagaggttactttgaagtacctcatt |
87 |
Q |
| |
|
||||| |||||||||||||| |||||||||||| ||||||||||| |
|
|
| T |
25249644 |
tttcaaacgaaatttcaacagggaggttactttggagtacctcatt |
25249599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0156 (Bit Score: 94; Significance: 7e-46; HSPs: 1)
Name: scaffold0156
Description:
Target: scaffold0156; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 35383 - 35286
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35383 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaagaggttactttgaagtacctcattttttattccga |
35286 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 93; Significance: 3e-45; HSPs: 19)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 29186305 - 29186197
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| | |
|
|
| T |
29186305 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaagaggttactttgaagtgcctcattttttattccgagt |
29186206 |
T |
|
| Q |
101 |
cagaccctt |
109 |
Q |
| |
|
| ||||||| |
|
|
| T |
29186205 |
cggaccctt |
29186197 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 1728186 - 1728079
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
1728186 |
acccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttgacaaagaggttactttgaagtacctcattttttattccgagt |
1728087 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
1728086 |
cggaccct |
1728079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 20372936 - 20372843
Alignment:
| Q |
5 |
attttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20372936 |
attttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacagagaggttactttgaagtacctcattttttattccga |
20372843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 5 - 98
Target Start/End: Complemental strand, 20398658 - 20398565
Alignment:
| Q |
5 |
attttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
20398658 |
attttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacagagaggttactttgaagtacctcattttttattccga |
20398565 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 43598073 - 43597966
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43598073 |
acccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
43597974 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
43597973 |
cggaccct |
43597966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 43603565 - 43603458
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43603565 |
acccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
43603466 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
43603465 |
cggaccct |
43603458 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 43609057 - 43608950
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
43609057 |
acccattttattcgtatttttaaagtcgggaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
43608958 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
43608957 |
cggaccct |
43608950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 23350103 - 23350006
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23350103 |
acccattttattcgtatttttaaagtcgggaattctcgtcatttcagacgaaatttcggcaaagaggttactttgaagtacctcattttttattccga |
23350006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24956873 - 24956766
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
24956873 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
24956774 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
24956773 |
cggaccct |
24956766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 24965336 - 24965229
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
24965336 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
24965237 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
24965236 |
cggaccct |
24965229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 28843978 - 28844085
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
28843978 |
acccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
28844077 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
28844078 |
cggaccct |
28844085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 28852588 - 28852695
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
28852588 |
acccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
28852687 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
28852688 |
cggaccct |
28852695 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 31410928 - 31411022
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattc |
95 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
31410928 |
acccattttattcgtatttttaaagttaggaattttcgtcgtttaaaacgaaatttcgacaaagaggttactttgaagtacctcattttttattc |
31411022 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 31421827 - 31421916
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttt |
90 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
31421827 |
acccattttattcgtatttttgaagtcggaaattttcgtcgtttcagacaaaatttcgacaaagatgttactttgaagtacctcattttt |
31421916 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 74
Target Start/End: Original strand, 19223595 - 19223666
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttacttt |
74 |
Q |
| |
|
|||||||||| ||||||||||||||| ||||| ||||||||||||| ||||| || ||| |||||||||||| |
|
|
| T |
19223595 |
ccattttatttgtatttttaaagtcgagaattgtcgtcgtttcagatgaaatctcgacagagaggttacttt |
19223666 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Original strand, 17638318 - 17638364
Alignment:
| Q |
42 |
tttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
||||| |||||||||| ||| |||||||||||||||||||||||||| |
|
|
| T |
17638318 |
tttcaaacgaaatttcgacagagaggttactttgaagtacctcattt |
17638364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 88
Target Start/End: Complemental strand, 23028053 - 23028007
Alignment:
| Q |
42 |
tttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
|||||||||||||||| || |||||||||||||||||||||||||| |
|
|
| T |
23028053 |
tttcagacgaaatttcggcagagaggttactttgaagtacctcattt |
23028007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 87
Target Start/End: Original strand, 23037923 - 23037969
Alignment:
| Q |
41 |
gtttcagacgaaatttcaacaaagaggttactttgaagtacctcatt |
87 |
Q |
| |
|
||||||||||||||||| || ||||||||||||||||||||||||| |
|
|
| T |
23037923 |
gtttcagacgaaatttcggcagagaggttactttgaagtacctcatt |
23037969 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 275
Target Start/End: Original strand, 19223811 - 19223857
Alignment:
| Q |
229 |
caatgttgtcaataagtccgaaggttttcggcagtggtccaaatttc |
275 |
Q |
| |
|
|||||||||||||||||||||| |||||| ||| |||||||||||| |
|
|
| T |
19223811 |
caatgttgtcaataagtccgaaagttttcagcaagggtccaaatttc |
19223857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 9)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13831538 - 13831645
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
13831538 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactttgaagtacctcattttttattccgagt |
13831637 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
13831638 |
cggaccct |
13831645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 13839571 - 13839676
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaatca |
102 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
13839571 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactttgaagtacctcattttttattccgagtcg |
13839670 |
T |
|
| Q |
103 |
gaccct |
108 |
Q |
| |
|
|||||| |
|
|
| T |
13839671 |
gaccct |
13839676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 10439976 - 10440082
Alignment:
| Q |
2 |
cccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaatc |
101 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| ||||||||||||||||||||||| || |
|
|
| T |
10439976 |
cccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcagagaggttactttaaagtacctcattttttattccgagtc |
10440075 |
T |
|
| Q |
102 |
agaccct |
108 |
Q |
| |
|
||||||| |
|
|
| T |
10440076 |
agaccct |
10440082 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 4952424 - 4952317
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
4952424 |
acccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
4952325 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
4952324 |
cggaccct |
4952317 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 18304419 - 18304312
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| | |
|
|
| T |
18304419 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttatttcgagt |
18304320 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
18304319 |
cggaccct |
18304312 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 12978493 - 12978600
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
12978493 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
12978592 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
12978593 |
cggaccct |
12978600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21663050 - 21662962
Alignment:
| Q |
1 |
acccattttattcgtattttt-aaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
||||||||||||||||||||| |||| || || | |||||||||| |||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
21663050 |
acccattttattcgtattttttaaagccgagagtcttcgtcgttttagacgaaatttcaacagggaggttactttgaagtacctcattt |
21662962 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 30244815 - 30244869
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttc |
57 |
Q |
| |
|
||||||||||||||||||||||||| ||||||||||| ||||||| || |||||| |
|
|
| T |
30244815 |
ccattttattcgtatttttaaagtcaggaattttcgttgtttcagtcgtaatttc |
30244869 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 89
Target Start/End: Complemental strand, 1955746 - 1955691
Alignment:
| Q |
34 |
tttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
|||||||||||||||| ||||||| || |||||||||||||||| |||||||||| |
|
|
| T |
1955746 |
tttcgtcgtttcagacaaaatttcggcagagaggttactttgaagcacctcatttt |
1955691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 19)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 8154671 - 8154564
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
8154671 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactttgaagtacctcattttttattccgagt |
8154572 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
8154571 |
cggaccct |
8154564 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 50824390 - 50824497
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| | |
|
|
| T |
50824390 |
acccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggttactttgaagtacctcattttttattccgagt |
50824489 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
50824490 |
cggaccct |
50824497 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 50851470 - 50851363
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| | |
|
|
| T |
50851470 |
acccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggttactttgaagtacctcattttttattccgagt |
50851371 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
50851370 |
cggaccct |
50851363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 41006594 - 41006701
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
41006594 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
41006693 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
41006694 |
cggaccct |
41006701 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 41015374 - 41015481
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
41015374 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
41015473 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
41015474 |
cggaccct |
41015481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 14538630 - 14538534
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaac-aaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14538630 |
ccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaaaagaggttactttgaagtacctcattttttattccga |
14538534 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 108
Target Start/End: Complemental strand, 27341360 - 27341254
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatt-ttttattccgaatc |
101 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||||| ||||||||||| || |
|
|
| T |
27341360 |
ccattttattcatatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcagaaaggttactttgaagtacctcatttttttattccgagtc |
27341261 |
T |
|
| Q |
102 |
agaccct |
108 |
Q |
| |
|
|| |||| |
|
|
| T |
27341260 |
aggccct |
27341254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 28470242 - 28470137
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaatca |
102 |
Q |
| |
|
||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||| || ||||| |||||||||||||||||||||| || || |
|
|
| T |
28470242 |
ccattttattcgtatttttaaagtcagaaattttcgtcgtttcagacgaaatttcgacaaa-agattactatgaagtacctcattttttattctgagtcg |
28470144 |
T |
|
| Q |
103 |
gaccctt |
109 |
Q |
| |
|
||||||| |
|
|
| T |
28470143 |
gaccctt |
28470137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9525461 - 9525364
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| || | |||||||||| || |||||||||||||||||||| |
|
|
| T |
9525461 |
acccattttattcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggcagaaaggttactttaaaatacctcattttttattccga |
9525364 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 5 - 108
Target Start/End: Original strand, 2211281 - 2211384
Alignment:
| Q |
5 |
attttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaatcaga |
104 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| || ||| || |||||||||||||||||||| |||| |
|
|
| T |
2211281 |
attttattcgtatttttaaagtcaggaattttcgtcgtttaagacgaaatttcggcaaagagggtattttaaaatacctcattttttattccgagtcagg |
2211380 |
T |
|
| Q |
105 |
ccct |
108 |
Q |
| |
|
|||| |
|
|
| T |
2211381 |
ccct |
2211384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 9555135 - 9555038
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| || | |||||||||| || |||||||||||||||||||| |
|
|
| T |
9555135 |
acccattttactcgtatttttaaagtcgggaattttcgttgttttagacgaaatttcggcagaaaggttactttaaaatacctcattttttattccga |
9555038 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 17933693 - 17933780
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
17933693 |
acccattttattcgtatttttaaagtcggaaattttcgttatttcagacgaaatttcttcggagaggttactttgaagtacctcattt |
17933780 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 43470580 - 43470492
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
|||| |||||||||||||||||||| || ||||||| ||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
43470580 |
accctttttattcgtatttttaaagccgagaattttattcgtttcagacgaaatttcggcagagaggttactttgaagtacctcatttt |
43470492 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 88
Target Start/End: Original strand, 17919239 - 17919324
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
||||||||||||||||||||||| || ||||||||| |||||||||||||||| | |||||||||||| ||||||||||||| |
|
|
| T |
17919239 |
ccattttattcgtatttttaaagccgaaaattttcgttatttcagacgaaatttcgtcggagaggttactttaaagtacctcattt |
17919324 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 16816228 - 16816145
Alignment:
| Q |
4 |
cattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||| ||||||||||||||| || ||||| |||||||||||||||||||| |
|
|
| T |
16816228 |
cattttattcgtatttttaaagccggaaattttcgttatttcagacgaaattttgacggagagg-tactttgaagtacctcattt |
16816145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 21186787 - 21186841
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttc |
57 |
Q |
| |
|
|||||||||||||| |||||||| || |||||||||| |||||| |||||||||| |
|
|
| T |
21186787 |
ccattttattcgtacttttaaagccgagaattttcgttgtttcaaacgaaatttc |
21186841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 31276593 - 31276640
Alignment:
| Q |
42 |
tttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
||||| |||||||||| |||| ||||||||||||||||||||||||| |
|
|
| T |
31276593 |
tttcaaacgaaatttcgacaagaaggttactttgaagtacctcatttt |
31276640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 16288692 - 16288733
Alignment:
| Q |
48 |
acgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
16288692 |
acgaaatttcggcagagaggttactttgaagtacctcatttt |
16288733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 18349597 - 18349650
Alignment:
| Q |
4 |
cattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttc |
57 |
Q |
| |
|
||||||||||||| ||||||| |||| ||| | |||||||| |||||||||||| |
|
|
| T |
18349597 |
cattttattcgtacttttaaaatcggaaatgtccgtcgttttagacgaaatttc |
18349650 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 13)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 3432917 - 3432810
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
3432917 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttgacaaagaggttactttgaagtacctcattttttattccgagt |
3432818 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
3432817 |
cggaccct |
3432810 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 32137779 - 32137684
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |
|
|
| T |
32137779 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaataagttactttgaagtacctcattttttattccga |
32137684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31539992 - 31540099
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
31539992 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
31540091 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
31540092 |
cggaccct |
31540099 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 31548561 - 31548668
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
31548561 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
31548660 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
31548661 |
cggaccct |
31548668 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 35104091 - 35103984
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
35104091 |
acccattttattcgtatttttaaagttgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
35103992 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
35103991 |
cggaccct |
35103984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 98
Target Start/End: Complemental strand, 41746718 - 41746622
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaac-aaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41746718 |
ccattttattcatatttttaaagtcgggaattttcgtcgtttcagacaaaatttcggcaaaagaggttactttgaagtacctcattttttattccga |
41746622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29221515 - 29221429
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| |||||||||||||||| || ||||| || |||||| |||||||||| |
|
|
| T |
29221515 |
acccattttattcgtatttttaaagtcggaaattttcgctatttcagacgaaatttcggcagagagg-tattttgaaatacctcattt |
29221429 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 28457629 - 28457681
Alignment:
| Q |
36 |
tcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
|||||||||||||||||||||| ||| ||||||||||||||||||| |||||| |
|
|
| T |
28457629 |
tcgtcgtttcagacgaaatttcgacagagaggttactttgaagtacatcattt |
28457681 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 44320219 - 44320132
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
|||||||||||||||||||| || | || ||| ||||||||||||||||||||||| || |||||||||| ||||||||||||| |
|
|
| T |
44320219 |
acccattttattcgtattttaaacgccgagaaggatcgtcgtttcagacgaaatttcagcagggaggttacttgaaagtacctcattt |
44320132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 51058412 - 51058330
Alignment:
| Q |
4 |
cattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatt |
87 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||| |||||| ||||||||||| || | ||| || |||||| ||||||||| |
|
|
| T |
51058412 |
cattttattcgtatttttaaagctgggaattttcgttgtttcaaacgaaatttcagcagaaagg-tattttgaaatacctcatt |
51058330 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 88
Target Start/End: Complemental strand, 8241491 - 8241438
Alignment:
| Q |
35 |
ttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
||||||||||||||||||||||| | |||||||||||| ||||||||||||| |
|
|
| T |
8241491 |
ttcgtcgtttcagacgaaatttcggtagagaggttactttaaagtacctcattt |
8241438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 86
Target Start/End: Original strand, 13462775 - 13462819
Alignment:
| Q |
42 |
tttcagacgaaatttcaacaaagaggttactttgaagtacctcat |
86 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
13462775 |
tttcagacgaaatttggataaagaggttactttgaagtacctcat |
13462819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 42 - 87
Target Start/End: Original strand, 22460026 - 22460071
Alignment:
| Q |
42 |
tttcagacgaaatttcaacaaagaggttactttgaagtacctcatt |
87 |
Q |
| |
|
||||| |||||||||| ||| ||||||||||||| ||||||||||| |
|
|
| T |
22460026 |
tttcaaacgaaatttcgacagagaggttactttggagtacctcatt |
22460071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 86; Significance: 4e-41; HSPs: 14)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 33298123 - 33298219
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
33298123 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcgacaaaga-gttactttgaagtacctcattttttattccga |
33298219 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 13825741 - 13825838
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
13825741 |
acccattttattcgtatttttaaagtcaggaattttcgtcgtttcagacgaaatttcgacagagaggttactttgaagtacctcatttttgattccga |
13825838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 5004099 - 5004206
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||| | |
|
|
| T |
5004099 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcatttttgattccgagt |
5004198 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
5004199 |
cggaccct |
5004206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 2 - 92
Target Start/End: Complemental strand, 15391637 - 15391547
Alignment:
| Q |
2 |
cccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttttta |
92 |
Q |
| |
|
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
15391637 |
cccattttattcgtatttttaaagccaggaattttcgtcgtttcagacgaaatttcgacaaagaggttactttgaagtacctcatttttta |
15391547 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 30824556 - 30824459
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
30824556 |
acccattttatttgtatttttaaagtcgggaattttcgtcgtttcagacgaaattttggcaaagaggttactttgaagtacctcatttttgattccga |
30824459 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 11279875 - 11279982
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
11279875 |
acccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
11279974 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
11279975 |
cggaccct |
11279982 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25991888 - 25991995
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||||||||| || | |
|
|
| T |
25991888 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagaagaaatttcggtagagaggttactttgaagtacctcattttttattcagagt |
25991987 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
25991988 |
cggaccct |
25991995 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 35091703 - 35091596
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
||||||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
35091703 |
acccattttattcatatttttaaagtcggaaattttcgtcgtttcagacgaaattttggcaaggaggttactttgaagtacctcattttttatttcgaat |
35091604 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
35091603 |
cggaccct |
35091596 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 25550333 - 25550430
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||||||||||| |
|
|
| T |
25550333 |
acccattttattcatatttttaaagtcgggaattttcgtcgtttcaaacgaaattttggcagagaggttactttgaagtacctcattttttattccga |
25550430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 25506568 - 25506461
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||||||| || |||||||||||| ||||||| | |
|
|
| T |
25506568 |
acccattttattcgtatttttaaagtcgggaattttcgtcgttttagacgaaatttcggcagagaggttactttaaaatacctcatttttgattccgagt |
25506469 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
||| |||| |
|
|
| T |
25506468 |
caggccct |
25506461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5994737 - 5994827
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttttt |
91 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
5994737 |
acccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacaaaattttggcaaagaggttactttgaagtacctcatttttt |
5994827 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 23925373 - 23925481
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttttt-attccgaa |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| || ||| ||||||||||| | ||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
23925373 |
acccattttattcgtatttttaaagtcgggaattttcatcatttttgacgaaatttcggtagagatgttactttgaagtacctcattttttgattccgag |
23925472 |
T |
|
| Q |
100 |
tcagaccct |
108 |
Q |
| |
|
|||| |||| |
|
|
| T |
23925473 |
tcaggccct |
23925481 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 22 - 99
Target Start/End: Complemental strand, 26526708 - 26526631
Alignment:
| Q |
22 |
aaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaa |
99 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || || || |||||||||||| |||||||||||| ||||||| |
|
|
| T |
26526708 |
aaagtcgggaattttcgtcgtttcagacgaaatatcggcagagtggttactttgaattacctcatttttggttccgaa |
26526631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 14894939 - 14894998
Alignment:
| Q |
30 |
gaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
||||||| |||| ||||||||| ||||| |||||| |||||||||||||||||||||| |
|
|
| T |
14894939 |
gaatttttgtcgcttcagacgatatttcggcaaagaaattactttgaagtacctcatttt |
14894998 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0111 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0111
Description:
Target: scaffold0111; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 33073 - 33180
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
33073 |
acccattttatacgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggcaaagaggttactttaaagtacctcattttttattccgagt |
33172 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
33173 |
cggaccct |
33180 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0209 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0209
Description:
Target: scaffold0209; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 111 - 4
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccgaat |
100 |
Q |
| |
|
|||||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
111 |
acccattttattcgtatttttaaagttgagaattttcgccgtttcagacgaaattttggcaaagaggttactttgaagtacctcattttttattccgagt |
12 |
T |
|
| Q |
101 |
cagaccct |
108 |
Q |
| |
|
| |||||| |
|
|
| T |
11 |
cggaccct |
4 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0083 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0083
Description:
Target: scaffold0083; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 15851 - 15941
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttttt |
91 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||| |
|
|
| T |
15851 |
acccattttattcgtatttttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggttactttgaagtacctcatttttt |
15941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0632 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0632
Description:
Target: scaffold0632; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 4428 - 4518
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttttt |
91 |
Q |
| |
|
||||||||||||| ||||||||||||||| ||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |
|
|
| T |
4428 |
acccattttattcatatttttaaagtcggtaattttcatcgtttcagacgaaatttcgacagagaggttactttgaagtacctcatttttt |
4518 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0002 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0002
Description:
Target: scaffold0002; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 121266 - 121363
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||| |||||||| ||||||| |
|
|
| T |
121266 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcggtagagaggttactttgaagtaaatcatttttgattccga |
121363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0497 (Bit Score: 69; Significance: 6e-31; HSPs: 1)
Name: scaffold0497
Description:
Target: scaffold0497; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 11031 - 11119
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
|||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
11031 |
acccattttattcgtattgttaaagtcggaaattttcgtcgtttcagacgaaatttcggcagagaggttactttgaagtacctcatttt |
11119 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0173 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0173
Description:
Target: scaffold0173; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 956 - 859
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || | ||||||||||||| |||||||||||| ||||||| |
|
|
| T |
956 |
acccattttattcgtatttttaaagctgggaattttcgtcgtttcagacgaaatttcggcagaaaggttactttgaaatacctcatttttgattccga |
859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0016 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0016
Description:
Target: scaffold0016; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 23502 - 23600
Alignment:
| Q |
1 |
acccattttattcgtatttt-taaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattttttattccga |
98 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| || |||| ||||||||||| | |||||||||||||||||||||||||||| ||||||| |
|
|
| T |
23502 |
acccattttattcgtattttttaaagtcgggaattttcatcatttctgacgaaatttcggtagagaggttactttgaagtacctcatttttgattccga |
23600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0431 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0431
Description:
Target: scaffold0431; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 177 - 264
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
||||||||||||||||||||||||| | | ||||||||| |||||||||||||||| || ||||| ||||||||||||||||||||| |
|
|
| T |
177 |
acccattttattcgtatttttaaagccagaaattttcgttatttcagacgaaatttcgacgaagagtttactttgaagtacctcattt |
264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0039 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0039
Description:
Target: scaffold0039; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 40858 - 40787
Alignment:
| Q |
3 |
ccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttacttt |
74 |
Q |
| |
|
|||||||||||||||||||||||||| | |||||| |||||||||||||||| || |||||||||||||||| |
|
|
| T |
40858 |
ccattttattcgtatttttaaagtcgagcattttcatcgtttcagacgaaatctcgacaaagaggttacttt |
40787 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0222 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0222
Description:
Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 20506 - 20422
Alignment:
| Q |
4 |
cattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcattt |
88 |
Q |
| |
|
|||||| |||||| |||||||| || |||||||||| ||||||||||||||||| || ||||||||||||| |||||||||||| |
|
|
| T |
20506 |
cattttgttcgtacttttaaagccgagaattttcgttgtttcagacgaaatttcggcagagaggttactttggagtacctcattt |
20422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0027
Description:
Target: scaffold0027; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 31 - 109
Target Start/End: Complemental strand, 65701 - 65622
Alignment:
| Q |
31 |
aattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatt-ttttattccgaatcagaccctt |
109 |
Q |
| |
|
||||||||| ||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||||| || ||||||| |
|
|
| T |
65701 |
aattttcgttgtttcggacgaaatttcgacaaagatgttactttgaagtacctcatttttttattccgagtcggaccctt |
65622 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0027; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 275
Target Start/End: Complemental strand, 65510 - 65470
Alignment:
| Q |
235 |
tgtcaataagtccgaaggttttcggcagtggtccaaatttc |
275 |
Q |
| |
|
||||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
65510 |
tgtcaatgagtccgaaagttttcggcagtggtccaaatttc |
65470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0315 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0315
Description:
Target: scaffold0315; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 10651 - 10595
Alignment:
| Q |
33 |
ttttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
10651 |
ttttcgtcgcttcagacgaaatttcggcaaagaggttactttgaagtacctcatttt |
10595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0170 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0170
Description:
Target: scaffold0170; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7217 - 7129
Alignment:
| Q |
1 |
acccattttattcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
|||||||||||| ||| |||||||| || |||||||||| ||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
7217 |
acccattttatttgtacttttaaagccgagaattttcgttgtttcagacgaaatttcgggaggaaggttactttgaagtacctcatttt |
7129 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0290 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0290
Description:
Target: scaffold0290; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 89
Target Start/End: Complemental strand, 15837 - 15760
Alignment:
| Q |
12 |
tcgtatttttaaagtcgggaattttcgtcgtttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
|||| ||||||||| | ||||||||||||| ||||||||||||| | | | ||||||||||||||||||||||||| |
|
|
| T |
15837 |
tcgtctttttaaagccaggaattttcgtcgcttcagacgaaattacggtagataggttactttgaagtacctcatttt |
15760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0048
Description:
Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 7620 - 7587
Alignment:
| Q |
63 |
agaggttactttgaagtacctcattttttattcc |
96 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
7620 |
agaggttactttgaagtacctcattttttattcc |
7587 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0007 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0007
Description:
Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 42 - 89
Target Start/End: Original strand, 61371 - 61418
Alignment:
| Q |
42 |
tttcagacgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
||||| || |||||||| || ||||||||||||||||||||||||||| |
|
|
| T |
61371 |
tttcaaacaaaatttcagcatagaggttactttgaagtacctcatttt |
61418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1380 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1380
Description:
Target: scaffold1380; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 89
Target Start/End: Original strand, 556 - 597
Alignment:
| Q |
48 |
acgaaatttcaacaaagaggttactttgaagtacctcatttt |
89 |
Q |
| |
|
|||||||||| ||| ||||||||||||| ||||||||||||| |
|
|
| T |
556 |
acgaaatttcgacagagaggttactttggagtacctcatttt |
597 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University