View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6722_high_20 (Length: 276)
Name: NF6722_high_20
Description: NF6722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6722_high_20 |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 24 - 258
Target Start/End: Original strand, 40623840 - 40624074
Alignment:
| Q |
24 |
cctcttaattaatgcatttgtttattgtacctattaaacttctaaattatgtgcatgtattcctattattcatgctaacttcataagtattctagctaat |
123 |
Q |
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| T |
40623840 |
cctcttaattaatgcatttgtttattgtacctagtaaacttctaaattatgtgcatgtattcctattattcatgctaacttcataagtattctagctaat |
40623939 |
T |
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| Q |
124 |
tgctttttattatttttagaatcttaatttagccttcataagaagaggtaaaagcacaatccttaacaagattattaaaacacttgttaacgggttaatt |
223 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40623940 |
tgctttttattatttttagaatcttaatttagccttcataagaagaggtaaaagcacaatccttaacaagattattaaaacacttgttaacgggttaatt |
40624039 |
T |
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| Q |
224 |
cagttaacaaaatgcaaattacagtcaacacatat |
258 |
Q |
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|||||||||||||||||||||||||||||| |||| |
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| T |
40624040 |
cagttaacaaaatgcaaattacagtcaacatatat |
40624074 |
T |
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