View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6722_low_27 (Length: 292)
Name: NF6722_low_27
Description: NF6722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6722_low_27 |
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Alignment Details
Target: chr1 (Bit Score: 228; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 228; E-Value: 1e-126
Query Start/End: Original strand, 43 - 282
Target Start/End: Original strand, 15259853 - 15260092
Alignment:
| Q |
43 |
aatttattcaagaactatataatgtagctataaatcagttatttgtaaaatcctccaggatacatgactattgaattcttctgaaattgtttaagaacta |
142 |
Q |
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| T |
15259853 |
aatttattcaagaactatataatgtagctataaatcagttatttgtaaaatcctccaggatacatgactattgaattcttctgaaattgtttaagaacta |
15259952 |
T |
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| Q |
143 |
tgcatctatataggttacatgaatgattccaatttataaagctttgattccaatggataatactggaatgactaatggaccaatgattaaataaaaaatc |
242 |
Q |
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| T |
15259953 |
tgtatctatataggatacatgaatgattccaatttataaagctttgattccaatggataatactggaatgactaatggaccaatgattaaataaaaaatc |
15260052 |
T |
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| Q |
243 |
aactaataatattcataacaacatgcttgttttattttat |
282 |
Q |
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| T |
15260053 |
aactaatactattcataacaacatgcttgttttattttat |
15260092 |
T |
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