View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6722_low_6 (Length: 546)

Name: NF6722_low_6
Description: NF6722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6722_low_6
NF6722_low_6
[»] chr5 (16 HSPs)
chr5 (294-476)||(38919701-38919882)
chr5 (41-217)||(38919957-38920140)
chr5 (153-217)||(43152956-43153020)
chr5 (153-217)||(34693112-34693176)
chr5 (153-217)||(8442270-8442334)
chr5 (153-217)||(12612913-12612977)
chr5 (153-217)||(18729173-18729237)
chr5 (153-217)||(21771369-21771433)
chr5 (153-217)||(35616697-35616761)
chr5 (153-217)||(37821037-37821101)
chr5 (153-217)||(9940165-9940229)
chr5 (153-217)||(14126525-14126589)
chr5 (153-217)||(17574120-17574184)
chr5 (153-217)||(39032500-39032564)
chr5 (153-216)||(12203257-12203320)
chr5 (136-208)||(35578970-35579042)
[»] chr3 (20 HSPs)
chr3 (359-546)||(27405221-27405403)
chr3 (141-216)||(32152005-32152080)
chr3 (153-209)||(29555737-29555793)
chr3 (153-217)||(43220038-43220102)
chr3 (153-217)||(9027724-9027788)
chr3 (153-217)||(14838941-14839005)
chr3 (153-217)||(43149239-43149303)
chr3 (153-217)||(43894881-43894945)
chr3 (153-216)||(33971995-33972058)
chr3 (154-217)||(49361734-49361797)
chr3 (294-324)||(53473599-53473629)
chr3 (153-214)||(884651-884712)
chr3 (156-217)||(7351537-7351598)
chr3 (168-217)||(29533872-29533921)
chr3 (153-213)||(26280684-26280744)
chr3 (153-217)||(44689914-44689978)
chr3 (153-217)||(48117447-48117511)
chr3 (154-214)||(48205159-48205219)
chr3 (153-217)||(51385336-51385400)
chr3 (153-217)||(55264928-55264992)
[»] chr2 (26 HSPs)
chr2 (359-546)||(5589764-5589949)
chr2 (153-217)||(37064169-37064233)
chr2 (153-217)||(23141465-23141529)
chr2 (153-217)||(23553255-23553319)
chr2 (153-217)||(30340105-30340169)
chr2 (153-217)||(1096239-1096303)
chr2 (153-217)||(34141554-34141618)
chr2 (153-216)||(28679239-28679302)
chr2 (153-209)||(5852577-5852633)
chr2 (153-217)||(35518386-35518450)
chr2 (154-217)||(1277842-1277905)
chr2 (153-217)||(8757655-8757719)
chr2 (153-217)||(11828716-11828780)
chr2 (153-217)||(26387727-26387791)
chr2 (154-214)||(28264642-28264702)
chr2 (154-217)||(43205204-43205267)
chr2 (154-217)||(44897737-44897800)
chr2 (168-217)||(34373119-34373168)
chr2 (153-217)||(9377654-9377718)
chr2 (153-217)||(12257012-12257076)
chr2 (161-217)||(13850088-13850144)
chr2 (153-217)||(16463403-16463467)
chr2 (153-217)||(18749259-18749323)
chr2 (154-206)||(33569690-33569742)
chr2 (153-217)||(38027511-38027575)
chr2 (153-217)||(38598246-38598309)
[»] chr1 (20 HSPs)
chr1 (431-546)||(228938-229052)
chr1 (356-546)||(31071135-31071324)
chr1 (431-546)||(50525862-50525976)
chr1 (153-217)||(8577398-8577462)
chr1 (154-217)||(835982-836045)
chr1 (153-217)||(12972602-12972666)
chr1 (153-217)||(22674808-22674872)
chr1 (153-217)||(29638826-29638890)
chr1 (153-217)||(37947116-37947180)
chr1 (153-217)||(41564776-41564840)
chr1 (153-217)||(48962097-48962161)
chr1 (153-216)||(11121592-11121655)
chr1 (153-217)||(23399885-23399949)
chr1 (153-217)||(29094644-29094708)
chr1 (153-217)||(31244631-31244695)
chr1 (153-207)||(12990381-12990435)
chr1 (168-217)||(4618755-4618804)
chr1 (160-217)||(30414975-30415032)
chr1 (153-217)||(27954339-27954403)
chr1 (153-217)||(46903581-46903645)
[»] chr8 (18 HSPs)
chr8 (153-217)||(34838166-34838230)
chr8 (153-217)||(25430757-25430821)
chr8 (153-217)||(8233392-8233456)
chr8 (153-217)||(28713204-28713268)
chr8 (153-217)||(28720551-28720615)
chr8 (153-217)||(28728193-28728257)
chr8 (153-216)||(14233540-14233603)
chr8 (153-216)||(42651032-42651095)
chr8 (153-214)||(3394598-3394659)
chr8 (153-214)||(18550093-18550154)
chr8 (153-214)||(34578233-34578294)
chr8 (153-217)||(27300457-27300521)
chr8 (153-217)||(33692832-33692896)
chr8 (153-216)||(13924121-13924184)
chr8 (153-217)||(4148551-4148615)
chr8 (153-217)||(22836035-22836099)
chr8 (168-216)||(38939103-38939151)
chr8 (153-217)||(41776286-41776350)
[»] chr4 (15 HSPs)
chr4 (153-216)||(21766659-21766722)
chr4 (154-217)||(50291393-50291456)
chr4 (153-217)||(18944396-18944460)
chr4 (154-217)||(54801384-54801447)
chr4 (153-209)||(32294648-32294704)
chr4 (153-217)||(33777005-33777069)
chr4 (153-217)||(36110245-36110309)
chr4 (153-217)||(43983008-43983072)
chr4 (154-217)||(32574388-32574451)
chr4 (168-217)||(9827896-9827945)
chr4 (156-217)||(46355190-46355251)
chr4 (153-217)||(4878078-4878142)
chr4 (153-217)||(38960556-38960620)
chr4 (153-217)||(39699363-39699427)
chr4 (153-217)||(45678374-45678438)
[»] scaffold0014 (1 HSPs)
scaffold0014 (153-217)||(145158-145222)
[»] chr7 (16 HSPs)
chr7 (153-217)||(27704546-27704610)
chr7 (153-217)||(41910081-41910145)
chr7 (153-214)||(2980625-2980686)
chr7 (153-217)||(24380617-24380681)
chr7 (153-217)||(37848516-37848580)
chr7 (153-217)||(47945094-47945158)
chr7 (153-217)||(47950524-47950588)
chr7 (153-217)||(1709395-1709459)
chr7 (153-217)||(23034209-23034273)
chr7 (153-217)||(29923782-29923845)
chr7 (153-217)||(48639281-48639345)
chr7 (131-217)||(44185287-44185373)
chr7 (153-217)||(17039268-17039332)
chr7 (153-217)||(37970044-37970108)
chr7 (153-217)||(41538591-41538655)
chr7 (153-217)||(45335974-45336038)
[»] chr6 (7 HSPs)
chr6 (153-217)||(608557-608621)
chr6 (153-217)||(34792117-34792181)
chr6 (153-213)||(22422265-22422325)
chr6 (156-214)||(17442936-17442994)
chr6 (168-217)||(34976727-34976776)
chr6 (153-217)||(7304001-7304065)
chr6 (153-217)||(32135333-32135397)
[»] scaffold0119 (1 HSPs)
scaffold0119 (154-217)||(23186-23249)
[»] scaffold0592 (1 HSPs)
scaffold0592 (161-217)||(1021-1077)
[»] scaffold0514 (1 HSPs)
scaffold0514 (153-217)||(1743-1807)
[»] scaffold0058 (1 HSPs)
scaffold0058 (153-217)||(3054-3118)
[»] scaffold0024 (1 HSPs)
scaffold0024 (153-217)||(48765-48829)


Alignment Details
Target: chr5 (Bit Score: 151; Significance: 1e-79; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 1e-79
Query Start/End: Original strand, 294 - 476
Target Start/End: Complemental strand, 38919882 - 38919701
Alignment:
Q  294 ttgtacaaatatcatttctcttttgattatgatttagctttgactcaaataataatataatcaaaggaaaaggctaaaatgcacgacataaaatttggtc 393  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |||    
T  38919882 ttgtacaaatatcatttctcttttgattatgattaa-ctttgactcaaataataatataatcaaaggaaaaagataaaatgcacgacataaaatttcgtc 38919784  T
Q  394 accattgcacgaatgaattgtatctaggagttatagtacttttttaattctgtttttacttcaaatgatcacactatagtcta 476  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38919783 accattgcacgaatgaattgtatgtagtagttatagtacttttttaattctgtttttacttcaaatgatcacactatagtcta 38919701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 41 - 217
Target Start/End: Complemental strand, 38920140 - 38919957
Alignment:
Q  41 atgaaataaaaatcgataatttgagtcacataaactc-------nnnnnnntagtaaataccaactcataaagtgccacttacaatgtagatagatattg 133  Q
    ||||||||||||| |||||||||||||||||||||||              |||||||||||||||||||||||||||||||||||||||||||||||||    
T  38920140 atgaaataaaaatagataatttgagtcacataaactctaaaaaaaaaaatatagtaaataccaactcataaagtgccacttacaatgtagatagatattg 38920041  T
Q  134 tatttttattaaagcattcatatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||| ||||||| |   ||||||||||||||||||||||| ||||||||||| ||| |||||||| ||||||||||||||||    
T  38920040 tattttgattaaagtagagatatttgaacaactcttttggtacaacttttaggacaaccttgttgttctctcttctcattggtc 38919957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 43152956 - 43153020
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| |||| |||||| |||||||||||| ||||||||||||||||    
T  43152956 atatttgaacaactattttggtacaactcttaggacaactttgttgttctctcttctcattggtc 43153020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 34693112 - 34693176
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||| |||||||||| || ||||||||||||||| ||||||| ||||||||| |||||||    
T  34693112 atatttgaataactcttttgatacaacttttaggataaccttgttgtgttctcttcttattggtc 34693176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 8442334 - 8442270
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||||||||| |||| | | || ||||||||| ||||||||||||||||    
T  8442334 atatttgaacaactattttggtataatttttggaacaattttgttgttctctcttctcattggtc 8442270  T

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Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 12612913 - 12612977
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||  |||||||| ||||||| ||| ||| |||||||| ||||||||||||||||    
T  12612913 atatttgaacaaccattttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 12612977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 18729173 - 18729237
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| ||| ||| ||||||| ||||||| | |||||||    
T  18729173 atatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctctttttattggtc 18729237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 21771369 - 21771433
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||| || |||| | |||||||    
T  21771369 atatttgaacaactcttttggtataacttttgggacaaccttgttgtgttatctttttattggtc 21771433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 35616697 - 35616761
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||||||||| |||| ||| ||| |||||||| |||||||| |||||||    
T  35616697 atatttgaacaactattttggtataaattttgggacaaccttgttgttctctcttcttattggtc 35616761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 37821037 - 37821101
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| ||||||| ||| ||| ||||||| ||||||||| |||||||    
T  37821037 atatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 37821101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 9940229 - 9940165
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||| |||| ||||| || || |||||||| |||||||||||| |||||| |||||||||    
T  9940229 atatttgaataactattttgatacaatttttaggacaactttgttgttctctcttttcattggtc 9940165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 14126589 - 14126525
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| | ||||| ||| ||| ||| ||| ||||||||| |||||||    
T  14126589 atatttgaacaactcttttggtagagcttttgggacaaccttgatgtgttctcttcttattggtc 14126525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 17574120 - 17574184
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| ||||||| ||| ||| |||||||| | |||||||| |||||    
T  17574120 atatttgaacaactattttggtacaacttttgggacaaccttgttgttctttcttctcactggtc 17574184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 39032500 - 39032564
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || || |||| ||| ||| ||||||| ||||||||| |||||||    
T  39032500 atatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtc 39032564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 12203320 - 12203257
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggt 216  Q
    ||||||||||||||||||||||| |||||||  || ||  |||||||  |||||||||||||||    
T  12203320 atatttgaacaactcttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggt 12203257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 35579042 - 35578970
Alignment:
Q  136 tttttattaaagcattcatatttgaacaactcttttggtataacttttaggataactttgttgttttctcttc 208  Q
    ||||||||  |||| | |||||||||||| | ||||||||||| |||| |||||| ||| ||||| |||||||    
T  35579042 tttttatttgagcaatgatatttgaacaattattttggtataatttttgggataattttattgttctctcttc 35578970  T

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Target: chr3 (Bit Score: 103; Significance: 5e-51; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 359 - 546
Target Start/End: Complemental strand, 27405403 - 27405221
Alignment:
Q  359 ggaaaaggctaaaatgcacgacataaaatttggtcaccattgcacgaatgaattgtatctaggagttatagtacttttttaattctgtttttacttcaaa 458  Q
    |||||| |||||||  ||||||||||||||| ||||||||||||||||||| |||||| | | ||||| |||||||||||||||||||||||||||||||    
T  27405403 ggaaaaagctaaaacacacgacataaaatttcgtcaccattgcacgaatgagttgtatgttgtagttagagtacttttttaattctgtttttacttcaaa 27405304  T
Q  459 tgatcacactatagtctagcatatgtgtttgtctatgagaaaacacaaacaattctctcctcatcattgcacctttgtgagttgctga 546  Q
    ||||  |||| ||||||||||||||||||||   ||||||||||||||| | |||||||||||||| || |||| |||||||||||||    
T  27405303 tgat--cactgtagtctagcatatgtgtttg---atgagaaaacacaaagacttctctcctcatcactgtacctatgtgagttgctga 27405221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 141 - 216
Target Start/End: Complemental strand, 32152080 - 32152005
Alignment:
Q  141 attaaagcattcatatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggt 216  Q
    ||||||||| | |||||||||||||| |||||||| || |||||||| ||||||||||| ||||||||| ||||||    
T  32152080 attaaagcagtgatatttgaacaacttttttggtacaatttttaggacaactttgttgtgttctcttcttattggt 32152005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 29555737 - 29555793
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttct 209  Q
    ||||||||||||||||||||||| ||||||| ||| ||| ||||||| |||||||||    
T  29555737 atatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttct 29555793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 43220038 - 43220102
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||| ||||||||||| ||| || ||||||||| ||| ||||||||||||    
T  43220038 atatttgaacaacttttttagtataacttttgggacaattttgttgttctctattctcattggtc 43220102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 9027788 - 9027724
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| ||||||| | | ||| |||||||| |||||||| |||||||    
T  9027788 atatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtc 9027724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 14838941 - 14839005
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| || |||| ||| ||| ||||||| ||||||| | |||||||    
T  14838941 atatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctctttttattggtc 14839005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 43149239 - 43149303
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| ||||||| | | ||| |||||||| |||||||| |||||||    
T  43149239 atatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtc 43149303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 43894881 - 43894945
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| ||||| |||| ||| |||||||||||  |||||| |||||||||    
T  43894881 atatttgaacaacttttttgctataatttttgggacaactttgttgtgctctcttttcattggtc 43894945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 33972058 - 33971995
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggt 216  Q
    |||||||||||||| |||||||| || ||||  || ||| |||||||| |||||||||||||||    
T  33972058 atatttgaacaactattttggtacaatttttgagacaaccttgttgttctctcttctcattggt 33971995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 49361734 - 49361797
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||| ||| |||||||  || ||||||||| || | ||||||||||||||    
T  49361734 tatttgaacaactcttttagtacaacttttgtgacaactttgttattctttcttctcattggtc 49361797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 294 - 324
Target Start/End: Complemental strand, 53473629 - 53473599
Alignment:
Q  294 ttgtacaaatatcatttctcttttgattatg 324  Q
    |||||||||||||||||||||||||||||||    
T  53473629 ttgtacaaatatcatttctcttttgattatg 53473599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 884712 - 884651
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattg 214  Q
    |||||| ||||||| ||||||||||| ||||  || || |||||||||||||||||| ||||    
T  884712 atattttaacaactattttggtataatttttgagagaattttgttgttttctcttcttattg 884651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 7351537 - 7351598
Alignment:
Q  156 tttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| ||||  ||||||||| ||| ||| ||||||| ||||||||| |||||||    
T  7351537 tttgaacaactcatttgaaataacttttgggaaaaccttgttgtgttctcttcttattggtc 7351598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 29533921 - 29533872
Alignment:
Q  168 ttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||| |||||||  || |||||||||||| ||||||||||||||||    
T  29533921 ttttggtacaacttttgagacaactttgttgttctctcttctcattggtc 29533872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 213
Target Start/End: Original strand, 26280684 - 26280744
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcatt 213  Q
    |||||||||||| | ||||||||||| |||| ||||||  |||||||| |||||| |||||    
T  26280684 atatttgaacaattattttggtataatttttgggataatcttgttgttctctcttttcatt 26280744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 44689978 - 44689914
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| |||||||| | ||||||| ||| ||| ||||||| ||||||| | |||||||    
T  44689978 atatttgaacaattcttttggaacaacttttgggacaaccttgttgtgttctctttttattggtc 44689914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 48117511 - 48117447
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| || ||||||| ||| ||| |||||||  |||||| |||||||||    
T  48117511 atatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 48117447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 48205219 - 48205159
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattg 214  Q
    |||||||||||||||||| ||| |||||||  || ||| ||||| |||| |||||||||||    
T  48205219 tatttgaacaactcttttagtacaacttttgtgacaaccttgttattttttcttctcattg 48205159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 51385336 - 51385400
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||| ||| ||||||| ||| |||  ||||||| |||||| |||||||||    
T  51385336 atatttgaacaactattttagtacaacttttgggacaaccatgttgttctctcttttcattggtc 51385400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 55264992 - 55264928
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| | ||||| ||||| |||| ||| |||||| |||| ||||||||| |||||||    
T  55264992 atatttgaacaatttttttgatataatttttgggacaactttattgtattctcttcttattggtc 55264928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 8e-50; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 359 - 546
Target Start/End: Original strand, 5589764 - 5589949
Alignment:
Q  359 ggaaaaggctaaaatgcacgacataaaatttggtcaccattgcacgaatgaattgtatctaggagttatagtacttttttaattctgtttttacttcaaa 458  Q
    |||||| ||||||| ||||||||||||||||  |||||||||||||||||| |||||  | | ||||| | ||||||||||||| || ||||||||||||    
T  5589764 ggaaaaagctaaaacgcacgacataaaatttcttcaccattgcacgaatgagttgtaagttgtagttagaatacttttttaattatgcttttacttcaaa 5589863  T
Q  459 tgatcacactatagtctagcatatgtgtttgtctatgagaaaacacaaacaattctctcctcatcattgcacctttgtgagttgctga 546  Q
     ||||||  | |||||||||||||||||||||||||||||||||||||||| |||||||||||||| || | ||||||||||||||||    
T  5589864 cgatcac--tgtagtctagcatatgtgtttgtctatgagaaaacacaaacacttctctcctcatcactgtatctttgtgagttgctga 5589949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 37064233 - 37064169
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||    
T  37064233 atatttgatcaactcttttggtacaacttttgggataaccttgttgttttctcttctcattggtc 37064169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 23141529 - 23141465
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| ||| ||| |||||||| ||||||||||||||||    
T  23141529 atatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 23141465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 23553319 - 23553255
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| ||| ||| |||||||| ||||||||||||||||    
T  23553319 atatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 23553255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 30340169 - 30340105
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| ||| ||| |||||||| ||||||||||||||||    
T  30340169 atatttgaacaactcttttggtacaacttttgggacaaccttgttgttctctcttctcattggtc 30340105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 1096239 - 1096303
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || ||||||||||| || |||||||| ||||||||| |||||||    
T  1096239 atatttgaacaactcttttgatacaacttttaggacaattttgttgtgttctcttcttattggtc 1096303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 34141618 - 34141554
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| | | ||||||||||| ||||||||| |||||||    
T  34141618 atatttgaacaactcttttggtacaacttttggaacaactttgttgtgttctcttcttattggtc 34141554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 28679302 - 28679239
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggt 216  Q
    ||||||||||||||||||||||| ||||||| ||| ||| ||||||| ||||||||| ||||||    
T  28679302 atatttgaacaactcttttggtacaacttttgggacaaccttgttgtattctcttcttattggt 28679239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 209
Target Start/End: Complemental strand, 5852633 - 5852577
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttct 209  Q
    ||||||||||||||||||||||| ||||||| ||| ||| ||||||| |||||||||    
T  5852633 atatttgaacaactcttttggtaaaacttttgggacaaccttgttgtgttctcttct 5852577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 35518450 - 35518386
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| || ||||||| ||| |||||||||||| |||||||| |||||||    
T  35518450 atatttgaacaactattttgatacaacttttgggacaactttgttgttctctcttcttattggtc 35518386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 1277905 - 1277842
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||| ||||||||||||||| ||  ||| | || ||||||||||||||||    
T  1277905 tatttgaacaactctttttgtataacttttaggacaatcttgatattctctcttctcattggtc 1277842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 8757719 - 8757655
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| ||||||| | | ||| |||||||| |||||||| |||||||    
T  8757719 atatttgaacaactattttggtacaacttttggtacaaccttgttgttctctcttcttattggtc 8757655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 11828716 - 11828780
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| || ||||||||||| ||| |||||||  |||||| |||||||||    
T  11828716 atatttgaacaacttttttgctacaacttttaggacaaccttgttgtgctctcttttcattggtc 11828780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 26387727 - 26387791
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || ||||||| ||| ||| ||||||| |||| |||| |||||||    
T  26387727 atatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttcttttcttattggtc 26387791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 214
Target Start/End: Complemental strand, 28264702 - 28264642
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattg 214  Q
    |||||||||||||||||| ||| |||||||| || ||| ||||| || |||||||||||||    
T  28264702 tatttgaacaactcttttagtacaacttttaagacaaccttgttattatctcttctcattg 28264642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 43205267 - 43205204
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||| ||||| || ||||||| ||| |||||||||||  |||||| |||||||||    
T  43205267 tatttgaacaacttttttgctacaacttttgggacaactttgttgtgctctcttttcattggtc 43205204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 44897800 - 44897737
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||| || ||||||| ||| ||| ||||||| ||||||| | |||||||    
T  44897800 tatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctctttttattggtc 44897737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 34373168 - 34373119
Alignment:
Q  168 ttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| |||  || |||||||||||| ||||||||||||||||    
T  34373168 ttttggtataacctttgagacaactttgttgttctctcttctcattggtc 34373119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 9377654 - 9377718
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||| ||||||  |||||||||||| |||  || |||||||||||| |||||||| |||||||    
T  9377654 atattttaacaaccattttggtataacctttgagacaactttgttgttctctcttcttattggtc 9377718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 12257076 - 12257012
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| || |||| ||| ||| ||||||| || |||||| |||||||    
T  12257076 atatttgaacaacttttttggtacaatttttgggacaaccttgttgtgttttcttcttattggtc 12257012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 217
Target Start/End: Original strand, 13850088 - 13850144
Alignment:
Q  161 acaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||| ||||||||||||||||  || || ||||||||| |||||| |||||||||    
T  13850088 acaactattttggtataacttttgagacaattttgttgttctctcttttcattggtc 13850144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 16463467 - 16463403
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||| ||||| ||||||| ||| ||  |||||||  |||||||| |||||||    
T  16463467 atatttgaacaactcttatggtacaacttttgggacaatcttgttgtgctctcttcttattggtc 16463403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 18749259 - 18749323
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| | ||||||||||| |||||||| ||| ||||||  ||||||| | |||||||    
T  18749259 atatttgaacaaattttttggtataatttttaggacaaccttgttgcgttctctttttattggtc 18749323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 206
Target Start/End: Complemental strand, 33569742 - 33569690
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctct 206  Q
    |||||||||||||||||||||| |||||||  || ||||||||| || |||||    
T  33569742 tatttgaacaactcttttggtacaacttttgagacaactttgttattctctct 33569690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 38027511 - 38027575
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||| |||||||||||| |||||||||||   | ||| ||||||| ||||||||| |||||||    
T  38027511 atatttaaacaactcttttagtataacttttgaaacaaccttgttgtgttctcttcttattggtc 38027575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 38598246 - 38598309
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||| |||||||||||  || ||| ||||||| ||||||||| |||||||    
T  38598246 atatttgaacaact-ttttagtataacttttgtgacaaccttgttgtgttctcttcttattggtc 38598309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 2e-19; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 431 - 546
Target Start/End: Original strand, 228938 - 229052
Alignment:
Q  431 acttttttaattctgtttttacttcaaatgatcacactatagtctagcatatgtgtttgtctatgagaaaacac-aaacaattctctcctcatcattgca 529  Q
    |||||||||||| ||||||||||||||||| ||| |   ||||||||||||||||||||||||| | | ||||| ||||| || ||||||||||| || |    
T  228938 acttttttaattgtgtttttacttcaaatggtcaaa--gtagtctagcatatgtgtttgtctataaaataacacaaaacacttttctcctcatcactgta 229035  T
Q  530 cctttgtgagttgctga 546  Q
     ||||||||||||||||    
T  229036 gctttgtgagttgctga 229052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 356 - 546
Target Start/End: Complemental strand, 31071324 - 31071135
Alignment:
Q  356 aaaggaaaaggctaaaatgcacgacataaaatttggtcaccattgcacgaatgaattgtatctaggagttatagtacttttttaattctgtttttacttc 455  Q
    ||||||||| |||||||  ||||||| | || ||  |||||||||||||||| ||||| |  | |  |||  || |||||||||||| ||||||||||||    
T  31071324 aaaggaaaaagctaaaacacacgacaaagaaattcatcaccattgcacgaattaattggaagttgttgtttgagaacttttttaattatgtttttacttc 31071225  T
Q  456 aaatgatcacactatagtctagcatatgtgtttgtctatgagaaaacacaaa-caattctctcctcatcattgcacctttgtgagttgctga 546  Q
    ||||| | | | ||  || |||||||||||||||||||| | | |||| ||| || || |||||||||||||| | ||||||||||||||||    
T  31071224 aaatggttaaagta--gtttagcatatgtgtttgtctataaaataacataaaacacttttctcctcatcattgtaactttgtgagttgctga 31071135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 431 - 546
Target Start/End: Complemental strand, 50525976 - 50525862
Alignment:
Q  431 acttttttaattctgtttttacttcaaatgatcacactatagtctagcatatgtgtttgtctatgagaaaaca-caaacaattctctcctcatcattgca 529  Q
    |||||||||||| ||||||||||||||||| ||| |   || |||||||||||||||||||||| | | ||||  ||||| || ||||||||||| || |    
T  50525976 acttttttaattatgtttttacttcaaatggtcaaa--gtaatctagcatatgtgtttgtctataaaataacataaaacacttttctcctcatcactgta 50525879  T
Q  530 cctttgtgagttgctga 546  Q
     ||||||||||||||||    
T  50525878 gctttgtgagttgctga 50525862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 8577398 - 8577462
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||||||||||| ||| ||| |||||||| ||| ||||||||||||    
T  8577398 atatttgaacaactattttggtataacttttgggacaaccttgttgttctctattctcattggtc 8577462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 836045 - 835982
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||||| ||||||| ||| ||  ||||| |||||||||||||||||||    
T  836045 tatttgaacaactcttttggtacaacttttgggacaatcttgttattttctcttctcattggtc 835982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 12972602 - 12972666
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| |||||||||||||||||||||| || |||||||| |||| || | |||||||    
T  12972602 atatttgaacaattcttttggtataacttttaggacaattttgttgtgttctttttttattggtc 12972666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 22674872 - 22674808
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| | |||||||| ||||||| | |||| ||||||||||||||||||||| ||||    
T  22674872 atatttgaacaatttttttggtacaacttttggaataattttgttgttttctcttctcatcggtc 22674808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 29638890 - 29638826
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| || |||| ||| || |||||||| ||||||||| |||||||    
T  29638890 atatttgaacaactcttttggtacaatttttgggacaattttgttgtgttctcttcttattggtc 29638826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 37947116 - 37947180
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| || ||||||| ||| ||| |||||||| ||||||||||||||||    
T  37947116 atatttgaacaactattttgttacaacttttgggacaaccttgttgttctctcttctcattggtc 37947180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 41564776 - 41564840
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| || |||| ||| ||| ||||||| ||||||||| |||||||    
T  41564776 atatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtc 41564840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 48962161 - 48962097
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| || |||| ||| ||| ||||||| ||||||||| |||||||    
T  48962161 atatttgaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtc 48962097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 11121655 - 11121592
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggt 216  Q
    |||||||||||||| ||||||||||||||||  || ||  |||||||| |||||||||||||||    
T  11121655 atatttgaacaactattttggtataacttttgtgacaatcttgttgttgtctcttctcattggt 11121592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 23399885 - 23399949
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||| |||||||||||||||| || |||| ||| ||| ||||||| ||||||||| |||||||    
T  23399885 atatttaaacaactcttttggtacaatttttgggacaaccttgttgtgttctcttcttattggtc 23399949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 29094644 - 29094708
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || ||||||| ||| ||| || |||| ||||||||| |||||||    
T  29094644 atatttgaacaactcttttgatacaacttttgggacaaccttattgtgttctcttcttattggtc 29094708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 31244631 - 31244695
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| ||| ||| ||| |||  ||||||| ||||||||||||||||    
T  31244631 atatttgaacaactattttggtacaacatttgggacaaccatgttgttctctcttctcattggtc 31244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 207
Target Start/End: Original strand, 12990381 - 12990435
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctctt 207  Q
    |||||||||||||||||||| || ||||||| ||| ||| ||||||| |||||||    
T  12990381 atatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctctt 12990435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 4618804 - 4618755
Alignment:
Q  168 ttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||| ||||||| |||||||| ||| || |||||||||    
T  4618804 ttttggtataacttttgggataaccttgttgttctcttttttcattggtc 4618755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 160 - 217
Target Start/End: Complemental strand, 30415032 - 30414975
Alignment:
Q  160 aacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||| ||||||| ||| ||  ||||||| ||||||||| |||||||    
T  30415032 aacaactcttttggtacaacttttgggacaatcttgttgtgttctcttcttattggtc 30414975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 27954403 - 27954339
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| |||||| | | || |||| | | |||||||||||| ||||||||||||||||    
T  27954403 atatttgaacaattcttttagcacaatttttggaacaactttgttgttctctcttctcattggtc 27954339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 46903645 - 46903581
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||| ||||||  |||||||| ||| |||  || |||||||||||| ||||||||||||||||    
T  46903645 atattttaacaaccattttggtacaacctttgagacaactttgttgttctctcttctcattggtc 46903581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 34838166 - 34838230
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||    
T  34838166 atatttgaacaactcttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtc 34838230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 25430821 - 25430757
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| ||| ||| ||||||| ||||||||| |||||||    
T  25430821 atatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 25430757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 8233392 - 8233456
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||| || |||| ||| ||||||| ||||||| |||||||| ||||||||||||||||    
T  8233392 atatttgaacatctatttttgtacaactttttggataaccttgttgttctctcttctcattggtc 8233456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 28713268 - 28713204
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| || |||| ||| ||| ||||||| ||||||||| |||||||    
T  28713268 atatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtc 28713204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 28720615 - 28720551
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| || |||| ||| ||| ||||||| ||||||||| |||||||    
T  28720615 atatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtc 28720551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 28728257 - 28728193
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| || |||| ||| ||| ||||||| ||||||||| |||||||    
T  28728257 atatttgaacaactcttttggtacaatttttgggacaaccttgttgtattctcttcttattggtc 28728193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Original strand, 14233540 - 14233603
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggt 216  Q
    |||| ||||||| | ||||||||||||||||  || |||||||||||| |||||||||||||||    
T  14233540 atatctgaacaattattttggtataacttttgtgacaactttgttgttctctcttctcattggt 14233603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 42651095 - 42651032
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggt 216  Q
    |||||||||||||| |||||||| |||||||  || ||| |||||||| |||||||||||||||    
T  42651095 atatttgaacaactattttggtacaacttttgagacaaccttgttgttctctcttctcattggt 42651032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 3394598 - 3394659
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattg 214  Q
    |||||||||||| | ||||| |||||||||| ||| |||||| ||||| |||||||||||||    
T  3394598 atatttgaacaagtattttgatataacttttgggacaactttattgttctctcttctcattg 3394659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 18550154 - 18550093
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattg 214  Q
    |||||||||||||| |||||||| ||||||| ||| ||| ||||||| ||||||||| ||||    
T  18550154 atatttgaacaactattttggtacaacttttgggacaaccttgttgtgttctcttcttattg 18550093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 34578233 - 34578294
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattg 214  Q
    |||||| ||||||| ||||||||||| |||| ||| |||||||||||| |||||||| ||||    
T  34578233 atattttaacaactattttggtataatttttgggacaactttgttgttctctcttcttattg 34578294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 27300521 - 27300457
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||| |||| ||||||| ||| ||  ||||||| ||||||||| |||||||    
T  27300521 atatttgaacaactctttcggtacaacttttgggacaatcttgttgtattctcttcttattggtc 27300457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 33692896 - 33692832
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| ||||| |||| ||| |||||||||||  |||||| |||||||||    
T  33692896 atatttgaacaacttttttgttataatttttgggacaactttgttgtgctctcttttcattggtc 33692832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 13924184 - 13924121
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggt 216  Q
    ||||||||||||||||||||||| |||||||  || ||  |||||||  |||||||||||||||    
T  13924184 atatttgaacaactcttttggtacaacttttgtgacaatcttgttgtcctctcttctcattggt 13924121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 4148551 - 4148615
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||| |||||||||||| ||||||| ||| ||| || |||| ||| ||||| |||||||    
T  4148551 atatttgaacgactcttttggtacaacttttgggacaaccttattgtgttcccttcttattggtc 4148615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 22836035 - 22836099
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| || || |||| ||||||| |||||||  |||||| |||||||||    
T  22836035 atatttgaacaacttttttgctacaatttttgggataaccttgttgtgctctcttttcattggtc 22836099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 38939103 - 38939151
Alignment:
Q  168 ttttggtataacttttaggataactttgttgttttctcttctcattggt 216  Q
    |||||||| || ||||  ||||||||||||||| |||||||||||||||    
T  38939103 ttttggtacaatttttgagataactttgttgttctctcttctcattggt 38939151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 41776350 - 41776286
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| || ||||||| ||| ||| |||||||  |||||| |||||||||    
T  41776350 atatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 41776286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 9e-16; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 153 - 216
Target Start/End: Complemental strand, 21766722 - 21766659
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggt 216  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||| ||||||||| ||||||    
T  21766722 atatttgaacaactcttttggtataacttttgggacaaccttgttgtgttctcttcttattggt 21766659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 50291456 - 50291393
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||||| ||||||| ||| ||| ||||||| ||||||||| |||||||    
T  50291456 tatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 50291393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 18944460 - 18944396
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| ||| ||| || |||| ||||||||| |||||||    
T  18944460 atatttgaacaactcttttggtacaacttttgggacaaccttattgtgttctcttcttattggtc 18944396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 54801384 - 54801447
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||| ||||| ||||  || ||||||||| || ||||||||||||||||    
T  54801384 tatttgaacaactcttttgatataatttttgagacaactttgttattctctcttctcattggtc 54801447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 209
Target Start/End: Original strand, 32294648 - 32294704
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttct 209  Q
    |||||||||||||||||||||||||| |||| ||| ||| ||||||| |||| ||||    
T  32294648 atatttgaacaactcttttggtataatttttgggacaaccttgttgtgttcttttct 32294704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 33777069 - 33777005
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| || |||| ||||||| |||||||| |||||| | |||||||    
T  33777069 atatttgaacaactattttggtacaatttttgggataaccttgttgttctctctttttattggtc 33777005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 36110309 - 36110245
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || || |||| ||| ||| ||||||| ||||||||| |||||||    
T  36110309 atatttgaacaactcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtc 36110245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 43983072 - 43983008
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||  |||||||| ||||||||||| ||  | |||||| ||||||||||||||||    
T  43983072 atatttgaacaaccattttggtacaacttttaggacaatctagttgttctctcttctcattggtc 43983008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 154 - 217
Target Start/End: Complemental strand, 32574451 - 32574388
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||| | |||| |||||||||||| || ||||||| | || ||||||||||||||||    
T  32574451 tatttgaacaattttttttgtataacttttaagacaactttggtattatctcttctcattggtc 32574388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 9827896 - 9827945
Alignment:
Q  168 ttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| |||  || |||||||||||| ||||||||||||||||    
T  9827896 ttttggtataacctttgagacaactttgttgttatctcttctcattggtc 9827945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 217
Target Start/End: Original strand, 46355190 - 46355251
Alignment:
Q  156 tttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||| ||| ||||||| ||| ||||||| | || ||| ||||||||||||    
T  46355190 tttgaacaactctttttgtacaacttttgggacaactttggtattctcttttctcattggtc 46355251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 4878142 - 4878078
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| || ||||||| ||| ||| |||||||  |||||| |||||||||    
T  4878142 atatttgaacaacttttttgctacaacttttgggacaaccttgttgtgctctcttttcattggtc 4878078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 38960556 - 38960620
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || || |||| ||| ||  ||||||| ||||||||| |||||||    
T  38960556 atatttgaacaactcttttgatacaatttttgggacaatcttgttgtgttctcttcttattggtc 38960620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 39699363 - 39699427
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || ||||||| | | ||| || |||| ||||||||| |||||||    
T  39699363 atatttgaacaactcttttgatacaacttttggaacaaccttattgtgttctcttcttattggtc 39699427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 45678438 - 45678374
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| ||||||| | | ||| |||||||| |||||| | |||||||    
T  45678438 atatttgaacaactattttggtacaacttttggtacaaccttgttgttctctctttttattggtc 45678374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 145222 - 145158
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| ||| ||| ||||||| ||||||||| |||||||    
T  145222 atatttgaacaactcttttggtacaacttttgggacaaccttgttgtgttctcttcttattggtc 145158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 27704610 - 27704546
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || ||||||| ||| ||||||||||| ||||||||| |||||||    
T  27704610 atatttgaacaactcttttgttacaacttttgggacaactttgttgtgttctcttcttattggtc 27704546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 41910081 - 41910145
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||    
T  41910081 atatttgaacaattcttttggtacaacttttaggacaaccttgttgtgttctcttcttattggtc 41910145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 2980625 - 2980686
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattg 214  Q
    |||||||||||||| ||||| |||||||||| |||||||||| || || |||||||||||||    
T  2980625 atatttgaacaacttttttgatataacttttgggataactttattattgtctcttctcattg 2980686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 24380617 - 24380681
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| | | ||| ||||||| ||||||||| |||||||    
T  24380617 atatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctcttcttattggtc 24380681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 37848516 - 37848580
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| || ||||||||||||||| |||||||  |||||| |||||||||    
T  37848516 atatttgaacaacttttttgctacaacttttaggataaccttgttgtgctctcttttcattggtc 37848580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 47945158 - 47945094
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || ||||||| ||| ||| ||||||| ||||||||| |||||||    
T  47945158 atatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattggtc 47945094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 47950588 - 47950524
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || ||||||| ||| ||| ||||||| ||||||||| |||||||    
T  47950588 atatttgaacaactcttttgatacaacttttgggacaaccttgttgtgttctcttcttattggtc 47950524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 1709459 - 1709395
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||||||||| |||| ||| ||  ||||||| ||||||| | |||||||    
T  1709459 atatttgaacaactcttttggtataatttttgggacaatcttgttgtgttctctttttattggtc 1709395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 23034209 - 23034273
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| ||| ||| |||||||  ||| |||| |||||||    
T  23034209 atatttgaacaactcttttggtacaacttttgggacaaccttgttgtgctcttttcttattggtc 23034273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 29923845 - 29923782
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| ||| ||| ||||||| |||| |||| |||||||    
T  29923845 atatttgaacaactcttttggtacaactttt-ggacaaccttgttgtgttcttttcttattggtc 29923782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 48639281 - 48639345
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| | | ||| ||||||| ||||||||  |||||||    
T  48639281 atatttgaacaactcttttggtacaacttttggaacaaccttgttgtgttctcttcgtattggtc 48639345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 131 - 217
Target Start/End: Complemental strand, 44185373 - 44185287
Alignment:
Q  131 ttgtatttttattaaagcattcatatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||| ||||||||| || | | |||||||||||||||||||| || |||||||  || ||| |  ||||| ||||||||||||||||    
T  44185373 ttgtttttttattagaggagtgatatttgaacaactcttttgatacaacttttgagacaacctcattgttctctcttctcattggtc 44185287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 17039332 - 17039268
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| | ||||| ||||| |||| ||| ||| ||||||| ||||||| |||||||||    
T  17039332 atatttgaacaatttttttgctataatttttgggacaaccttgttgtgttctcttttcattggtc 17039268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 37970108 - 37970044
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||| ||||||  |||||||| ||| |||  || |||||||||||| ||||||||||||||||    
T  37970108 atattttaacaaccattttggtacaacatttgagacaactttgttgttctctcttctcattggtc 37970044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 41538655 - 41538591
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| ||||||| || ||||||| ||| ||| ||||||| || |||||| |||||||    
T  41538655 atatttgaacaattcttttgatacaacttttgggacaaccttgttgtgttatcttcttattggtc 41538591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 45336038 - 45335974
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||| |||||||||||| || |||| ||| ||| |||||||| |||||| | |||||||    
T  45336038 atatttgaactactcttttggtacaaattttgggacaaccttgttgttctctctttttattggtc 45335974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 37; Significance: 0.00000000001; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 608557 - 608621
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| |||||||| |||| || ||| ||| |||||||| ||||||||||||||||    
T  608557 atatttgaacaactattttggtacaactgttgggacaaccttgttgttctctcttctcattggtc 608621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 34792181 - 34792117
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||| |||| || | |||||||    
T  34792181 atatttgaacaactcttttggtataacttttgggacaaccttgttgtgttctttttttattggtc 34792117  T

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Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 22422325 - 22422265
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcatt 213  Q
    |||||||||||| | |||||||| ||||||| | | |||||||||||| ||||||||||||    
T  22422325 atatttgaacaattattttggtacaacttttggtacaactttgttgttctctcttctcatt 22422265  T

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Target: chr6; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 17442994 - 17442936
Alignment:
Q  156 tttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattg 214  Q
    |||||||||||||||||||| ||||||| ||| ||| || |||| ||||||||| ||||    
T  17442994 tttgaacaactcttttggtacaacttttgggacaaccttattgtgttctcttcttattg 17442936  T

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Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 34976776 - 34976727
Alignment:
Q  168 ttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||| ||| |||  ||||||||||||||| ||||||||||||||||    
T  34976776 ttttggtacaacctttgagataactttgttgttctctcttctcattggtc 34976727  T

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Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 7304001 - 7304065
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||||| || |||||||  || ||| |  ||||| ||||||||||||||||    
T  7304001 atatttgaacaactcttttgatacaacttttgagacaacctcattgttctctcttctcattggtc 7304065  T

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Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 32135333 - 32135397
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| || ||||||||||| ||  |||||||  |||||| |||||||||    
T  32135333 atatttgaacaacttttttgctacaacttttaggacaatcttgttgtgctctcttttcattggtc 32135397  T

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Target: scaffold0119 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 23186 - 23249
Alignment:
Q  154 tatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||||||| ||||||||||||||| ||  ||| | || ||||||||||||||||    
T  23186 tatttgaacaactctttttgtataacttttaggacaatcttgatattctctcttctcattggtc 23249  T

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Target: scaffold0592 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 161 - 217
Target Start/End: Complemental strand, 1077 - 1021
Alignment:
Q  161 acaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||| |||||||| |||||||  ||||||||||||||| |||||| |||||||||    
T  1077 acaactattttggtacaacttttgagataactttgttgttctctcttttcattggtc 1021  T

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Target: scaffold0514 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 153 - 217
Target Start/End: Original strand, 1743 - 1807
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    ||||||||||||||||||||||| ||||||| ||| ||  ||||| | ||||||||| |||||||    
T  1743 atatttgaacaactcttttggtacaacttttgggacaatcttgttatgttctcttcttattggtc 1807  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 3118 - 3054
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||||| ||||| || ||||||| ||| |||||| ||||  |||||| |||||||||    
T  3118 atatttgaacaacttttttgctacaacttttgggacaactttattgtgctctcttttcattggtc 3054  T

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Target: scaffold0024 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 153 - 217
Target Start/End: Complemental strand, 48829 - 48765
Alignment:
Q  153 atatttgaacaactcttttggtataacttttaggataactttgttgttttctcttctcattggtc 217  Q
    |||||||||||| ||||||| || || |||| ||| ||| ||||||| ||||||||| |||||||    
T  48829 atatttgaacaattcttttgatacaatttttgggacaaccttgttgtgttctcttcttattggtc 48765  T

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