View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6722_low_7 (Length: 510)

Name: NF6722_low_7
Description: NF6722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6722_low_7
NF6722_low_7
[»] chr2 (12 HSPs)
chr2 (37-291)||(29997138-29997400)
chr2 (399-494)||(29996935-29997030)
chr2 (37-114)||(41086430-41086507)
chr2 (37-118)||(37559830-37559911)
chr2 (37-117)||(42802461-42802541)
chr2 (37-116)||(7696337-7696416)
chr2 (37-116)||(33533370-33533449)
chr2 (37-105)||(1269839-1269906)
chr2 (37-88)||(4975149-4975200)
chr2 (37-88)||(4993057-4993108)
chr2 (71-116)||(13337626-13337671)
chr2 (46-114)||(10772903-10772971)
[»] chr3 (13 HSPs)
chr3 (37-117)||(50518715-50518795)
chr3 (38-116)||(37123746-37123824)
chr3 (40-116)||(4171120-4171196)
chr3 (126-201)||(14194213-14194288)
chr3 (37-116)||(33143578-33143657)
chr3 (39-113)||(48892981-48893055)
chr3 (37-89)||(46358008-46358060)
chr3 (133-209)||(50518819-50518895)
chr3 (37-115)||(14893307-14893385)
chr3 (63-105)||(28937380-28937422)
chr3 (43-92)||(823029-823078)
chr3 (43-116)||(25648059-25648132)
chr3 (156-200)||(14280301-14280345)
[»] chr1 (9 HSPs)
chr1 (37-229)||(11439646-11439845)
chr1 (37-116)||(4431051-4431130)
chr1 (37-112)||(7451887-7451962)
chr1 (37-92)||(9312966-9313021)
chr1 (37-117)||(27102557-27102637)
chr1 (38-114)||(9557285-9557362)
chr1 (37-105)||(12636085-12636153)
chr1 (37-110)||(10785087-10785160)
chr1 (133-209)||(46768450-46768527)
[»] chr6 (2 HSPs)
chr6 (38-118)||(3880239-3880319)
chr6 (37-116)||(20701424-20701502)
[»] chr4 (7 HSPs)
chr4 (37-112)||(41117594-41117669)
chr4 (40-115)||(42719533-42719608)
chr4 (62-113)||(22810824-22810875)
chr4 (37-116)||(9262819-9262898)
chr4 (39-117)||(2061460-2061538)
chr4 (43-96)||(19814849-19814902)
chr4 (69-105)||(53823084-53823120)
[»] chr7 (11 HSPs)
chr7 (37-114)||(6726045-6726122)
chr7 (38-209)||(24324425-24324604)
chr7 (44-113)||(33719344-33719413)
chr7 (37-82)||(44755977-44756022)
chr7 (40-92)||(47456703-47456754)
chr7 (64-116)||(48058325-48058377)
chr7 (37-111)||(1321173-1321247)
chr7 (38-92)||(40292637-40292690)
chr7 (48-89)||(5252720-5252761)
chr7 (43-92)||(28171684-28171733)
chr7 (68-116)||(42532916-42532964)
[»] scaffold0050 (2 HSPs)
scaffold0050 (37-115)||(37084-37162)
scaffold0050 (126-209)||(36981-37065)
[»] chr5 (12 HSPs)
chr5 (126-220)||(7195024-7195118)
chr5 (38-116)||(26405175-26405253)
chr5 (43-116)||(25992377-25992450)
chr5 (38-105)||(8297857-8297924)
chr5 (37-116)||(26045589-26045668)
chr5 (130-208)||(14302171-14302249)
chr5 (47-116)||(5187318-5187387)
chr5 (40-105)||(7391626-7391691)
chr5 (126-210)||(26045686-26045771)
chr5 (133-210)||(26405278-26405355)
chr5 (133-209)||(30097607-30097684)
chr5 (68-117)||(21391935-21391984)
[»] scaffold0119 (1 HSPs)
scaffold0119 (37-105)||(41796-41863)
[»] chr8 (2 HSPs)
chr8 (37-104)||(43312281-43312348)
chr8 (133-209)||(17656466-17656542)


Alignment Details
Target: chr2 (Bit Score: 154; Significance: 2e-81; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 37 - 291
Target Start/End: Complemental strand, 29997400 - 29997138
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaaggt--------tatccctgaca 128  Q
    |||||||||||||||||||||||| || |||||| | ||||||||||||||||| | ||||||| |||||||||||||||         ||  |   |||    
T  29997400 aaacaacaaattttattaaacaatctggtctctggtaaagacgaacagagaccgatgaaattgaaaataaaaacaaaaggcaccgtatataagcggaaca 29997301  T
Q  129 tccaaaaataaacaccctaaaatcatccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttcataaaaccaaccaccgtaaa 228  Q
    ||| |||||||||| ||||||||||||||||||||||||||  ||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||    
T  29997300 tccgaaaataaacatcctaaaatcatccctgaggaccactcctactaaaatatacgtcaccatctaaaacagattccttcataaaaccaaccaccgtaaa 29997201  T
Q  229 actataggttggatatagtgaactaatatattaatccttatgtgattttctctccttgttatc 291  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29997200 actataggttggatatagtgaactaatatattaatccttatgtgattttctctccttgttatc 29997138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 399 - 494
Target Start/End: Complemental strand, 29997030 - 29996935
Alignment:
Q  399 cttccatttcttatgttttcttcacctttaaaaccttgaagaatcctcgtgtaaatttcgttgtatttctctaagcgtgcatatggtctttctgaa 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||    
T  29997030 cttccatttcttatgttttcttcacctttaaaaccttgaagaatcctcatgtaaatttcgttgtatttctctaagtgtgcatatggtctttctgaa 29996935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 41086430 - 41086507
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaa 114  Q
    |||||||||||||| |||||||| | ||||||||||||||||||||||||||| || ||| |||| ||| ||| ||||    
T  41086430 aaacaacaaattttgttaaacaactagatctctgctcaagacgaacagagaccagtgaaactgagcatacaaagaaaa 41086507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 118
Target Start/End: Complemental strand, 37559911 - 37559830
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaaggtt 118  Q
    ||||||||||||||||| || |||  |||| ||| | |||||||||||||| |||| |||||||||||| |||| |||||||    
T  37559911 aaacaacaaattttatttaaaaatgagatccctgtttaagacgaacagagatcggtgaaattgagaatacaaactaaaggtt 37559830  T

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Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 42802541 - 42802461
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaaggt 117  Q
    |||||||||||||||||||||||  | ||| ||  |||||||||||||||| | || ||| |||||||| |||||||||||    
T  42802541 aaacaacaaattttattaaacaacctaatccctattcaagacgaacagagatcagtgaaactgagaatacaaacaaaaggt 42802461  T

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Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 7696416 - 7696337
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||| ||||||||||| |||||    ||| |||||||||| |||||||||||| | |||||||||||| ||||||||||    
T  7696416 aaacagcaaattttattgaacaaccaaatccctgctcaagatgaacagagaccgatgaaattgagaatacaaacaaaagg 7696337  T

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Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 33533370 - 33533449
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||||||||||||||| ||||    |||||||||||||||||||||||||| ||| ||| | || ||| ||||||||||    
T  33533370 aaacaacaaattttatttaacagccagatctctgctcaagacgaacagagactggtgaaactaaggatacaaacaaaagg 33533449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 1269906 - 1269839
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaata 105  Q
    ||||||||||||||||| ||||||   ||||||| |||||||||| |||| ||||| ||||||||||||    
T  1269906 aaacaacaaattttatttaacaatcaaatctctgttcaagacgaa-agaggccggtgaaattgagaata 1269839  T

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Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 4975200 - 4975149
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagac 88  Q
    ||||||||||||||||| ||| ||  | ||||||||||||||||||||||||    
T  4975200 aaacaacaaattttatttaaccatcaggtctctgctcaagacgaacagagac 4975149  T

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Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 88
Target Start/End: Complemental strand, 4993108 - 4993057
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagac 88  Q
    ||||||||||||||||| ||| ||  | ||||||||||||||||||||||||    
T  4993108 aaacaacaaattttatttaaccatcaggtctctgctcaagacgaacagagac 4993057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 116
Target Start/End: Complemental strand, 13337671 - 13337626
Alignment:
Q  71 ctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    |||||||||||||||||||||| |||  ||||||| ||||||||||    
T  13337671 ctcaagacgaacagagaccggtgaaacagagaatacaaacaaaagg 13337626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 114
Target Start/End: Complemental strand, 10772971 - 10772903
Alignment:
Q  46 attttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaa 114  Q
    ||||||||||||||  | ||| ||| ||||||||||||||||||| | ||| | |||||| ||||||||    
T  10772971 attttattaaacaacctaatccctgttcaagacgaacagagaccgatgaaactaagaatacaaacaaaa 10772903  T

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Target: chr3 (Bit Score: 57; Significance: 1e-23; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 37 - 117
Target Start/End: Original strand, 50518715 - 50518795
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaaggt 117  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||| ||| |||||||| |||||||||||    
T  50518715 aaacatcaaattttattaaacaatttgatccctgctcaagacgaacagagactggtgaaactgagaatacaaacaaaaggt 50518795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 116
Target Start/End: Complemental strand, 37123824 - 37123746
Alignment:
Q  38 aacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||| ||||||||||||||||||  ||||||||||||||||||| ||||||| | ||| |||||||| ||||||||||    
T  37123824 aacaagaaattttattaaacaattaaatctctgctcaagacgaactgagaccgatgaaactgagaatacaaacaaaagg 37123746  T

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Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 4171196 - 4171120
Alignment:
Q  40 caacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||||||| |||||||||| |  ||| ||||| ||||||||||||||||||| ||| |||||||| ||||||||||    
T  4171196 caacaaattctattaaacaactaaatccctgctaaagacgaacagagaccggtgaaactgagaatacaaacaaaagg 4171120  T

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Target: chr3; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 14194288 - 14194213
Alignment:
Q  126 acatccaaaaataaacaccctaaaatcatccctgaggaccactctcactaaaatacacgtcactacctaaaacaga 201  Q
    |||||| |||||||||| ||||||| ||  | |||||||||| | ||| |||||||||||||| ||||||||||||    
T  14194288 acatccgaaaataaacatcctaaaaacactcatgaggaccacacccaccaaaatacacgtcaccacctaaaacaga 14194213  T

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Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 33143578 - 33143657
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    |||||||||||||||||||||||   |||||||||||||| |||||| | | |||| ||| |||||||| || |||||||    
T  33143578 aaacaacaaattttattaaacaaccagatctctgctcaaggcgaacataaatcggtgaaactgagaatacaaccaaaagg 33143657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 39 - 113
Target Start/End: Original strand, 48892981 - 48893055
Alignment:
Q  39 acaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaa 113  Q
    |||| |||||||||||||||| | |||| |||||||||||||||| |||| | | ||| |||||||| |||||||    
T  48892981 acaataaattttattaaacaactagatccctgctcaagacgaacaaagacagatgaaactgagaatacaaacaaa 48893055  T

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Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 89
Target Start/End: Original strand, 46358008 - 46358060
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagacc 89  Q
    ||||||||||||||||| |||||   |||| ||||||||||||||||||||||    
T  46358008 aaacaacaaattttatttaacaaccagatccctgctcaagacgaacagagacc 46358060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 50518819 - 50518895
Alignment:
Q  133 aaaataaacaccctaaaatcatccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttca 209  Q
    |||||||||||||||||| || || |||||||||| | ||  ||||||||| |||| | |||||||||| |||||||    
T  50518819 aaaataaacaccctaaaaacacccatgaggaccacacccaacaaaatacacctcaccatctaaaacagactccttca 50518895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 14893385 - 14893307
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaag 115  Q
    |||||||||||||||||||||||   |||  |||||||||| |||||||||| ||| |||  |||| || |||||||||    
T  14893385 aaacaacaaattttattaaacaaccagataactgctcaagatgaacagagactggtgaaaccgagagtacaaacaaaag 14893307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 63 - 105
Target Start/End: Original strand, 28937380 - 28937422
Alignment:
Q  63 gatctctgctcaagacgaacagagaccggtaaaattgagaata 105  Q
    |||||||| |||||||||| |||||||||| ||||||||||||    
T  28937380 gatctctgttcaagacgaagagagaccggtgaaattgagaata 28937422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Original strand, 823029 - 823078
Alignment:
Q  43 caaattttattaaacaatttgatctctgctcaagacgaacagagaccggt 92  Q
    |||||||||||||| ||   |||| |||||||||||||||||||||||||    
T  823029 caaattttattaaaaaaccagatcgctgctcaagacgaacagagaccggt 823078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 25648132 - 25648059
Alignment:
Q  43 caaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||||| |||||||||  | ||| ||| |||||||||||||||| |||| ||| | |||||| ||||||||||    
T  25648132 caaatttaattaaacaacctaatccctgttcaagacgaacagagatcggtgaaactaagaatacaaacaaaagg 25648059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 156 - 200
Target Start/End: Original strand, 14280301 - 14280345
Alignment:
Q  156 cctgaggaccactctcactaaaatacacgtcactacctaaaacag 200  Q
    ||||||||| || | |||||||||||||||||| |||||||||||    
T  14280301 cctgaggacaacacccactaaaatacacgtcaccacctaaaacag 14280345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 9)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 37 - 229
Target Start/End: Original strand, 11439646 - 11439845
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg--------ttatccctgaca 128  Q
    |||||||||||||||||||||||   ||||||||||||||||||||| ||| |||| ||| |||||||| ||||||||||         ||  |   |||    
T  11439646 aaacaacaaattttattaaacaaccagatctctgctcaagacgaacaaagatcggtgaaaatgagaatacaaacaaaaggcgacatatatagacggaaca 11439745  T
Q  129 tccaaaaataaacaccctaaaatcatccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttcataaaaccaaccaccgtaaa 228  Q
    ||| ||||||||||||||||||||  |||||| ||| ||   ||| |||||||||||||| ||||||||||||| ||||||  ||| |||||||||||||    
T  11439746 tccgaaaataaacaccctaaaatc-cccctgaagacaacatccaccaaaatacacgtcaccacctaaaacagatcccttcacgaaagcaaccaccgtaaa 11439844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 4431130 - 4431051
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||| |||||||||||||||||    |||||||||||||||||| |||||||||| |||||||||||| ||||||||||    
T  4431130 aaacagcaaattttattaaacaaacatatctctgctcaagacgaatagagaccggtgaaattgagaatacaaacaaaagg 4431051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 7451887 - 7451962
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaa 112  Q
    ||||| ||||| ||||||||||| | |||||||||||||||||||||||||||||| ||| |||||||| ||||||    
T  7451887 aaacagcaaatattattaaacaactagatctctgctcaagacgaacagagaccggtgaaactgagaatacaaacaa 7451962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 92
Target Start/End: Original strand, 9312966 - 9313021
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggt 92  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||||    
T  9312966 aaacaacaaattttattaaacaacgagatctctgctcaagacgaacagagaccggt 9313021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 27102637 - 27102557
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaaggt 117  Q
    ||||| |||||||||||||||||   |||||||| |||||||||||| |||| ||| ||  |||||||| |||||||||||    
T  27102637 aaacagcaaattttattaaacaaccagatctctgttcaagacgaacaaagactggtgaacctgagaatacaaacaaaaggt 27102557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 114
Target Start/End: Complemental strand, 9557362 - 9557285
Alignment:
Q  38 aacaacaaattttattaaacaatttgatctctgctcaagacg-aacagagaccggtaaaattgagaataaaaacaaaa 114  Q
    ||||||||||||| ||||||||   ||||||||||||||||| ||||||||||||| ||  |||||||| ||| ||||    
T  9557362 aacaacaaattttgttaaacaaccagatctctgctcaagacgaaacagagaccggtgaatctgagaatacaaataaaa 9557285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 12636085 - 12636153
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaata 105  Q
    ||||||||||||||||| ||| ||  | || || |||||||||||||||||||||||||| ||| ||||    
T  12636085 aaacaacaaattttatttaactatcgggtccctactcaagacgaacagagaccggtaaaactgataata 12636153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 110
Target Start/End: Original strand, 10785087 - 10785160
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaac 110  Q
    ||||| ||||||| ||| |||||   |||| |||||||||||||| |||||| ||||||| |||||||| ||||    
T  10785087 aaacatcaaatttcatttaacaaccagatccctgctcaagacgaatagagacgggtaaaactgagaatacaaac 10785160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 46768527 - 46768450
Alignment:
Q  133 aaaataaacaccctaaaat-catccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttca 209  Q
    ||||||||||||||||||  || ||| |||||| || | ||| ||||| |||||||| |||||||||||| |||||||    
T  46768527 aaaataaacaccctaaaaaacacccccgaggacaacacccaccaaaattcacgtcaccacctaaaacagactccttca 46768450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 53; Significance: 3e-21; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 38 - 118
Target Start/End: Original strand, 3880239 - 3880319
Alignment:
Q  38 aacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaaggtt 118  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||||| ||| ||| |||| ||||||||||||    
T  3880239 aacaacaaattttattaaacaatcagatccctgctcaagacgaacagagaccggtgaaactgaaaatacaaacaaaaggtt 3880319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 20701424 - 20701502
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    |||| ||||||||||||||||||    ||| || ||||||||||||||||| |||| ||| |||||||| ||||||||||    
T  20701424 aaacgacaaattttattaaacaaccaaatccct-ctcaagacgaacagagatcggtgaaactgagaatacaaacaaaagg 20701502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 1e-20; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 37 - 112
Target Start/End: Original strand, 41117594 - 41117669
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaa 112  Q
    ||||||||||||||||||||||| | |||||||||||||||||||||||||| ||| ||||||||| || ||||||    
T  41117594 aaacaacaaattttattaaacaactagatctctgctcaagacgaacagagacaggtgaaattgagactacaaacaa 41117669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 42719608 - 42719533
Alignment:
Q  40 caacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaag 115  Q
    |||||||||||||||||||||   ||| |||||||||||||| |||||||||| ||| |||||||| |||||||||    
T  42719608 caacaaattttattaaacaatcaaatccctgctcaagacgaatagagaccggtgaaactgagaatacaaacaaaag 42719533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 62 - 113
Target Start/End: Original strand, 22810824 - 22810875
Alignment:
Q  62 tgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaa 113  Q
    ||||| ||||||||||||||||||||| ||| |||||||||||| |||||||    
T  22810824 tgatccctgctcaagacgaacagagactggtgaaattgagaatacaaacaaa 22810875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 9262898 - 9262819
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||| |||||||||||||||||    ||| | |||||||||||||| |||||| | ||| |||||||| ||||||||||    
T  9262898 aaacagcaaattttattaaacaaccaaatccccgctcaagacgaacaaagaccgatgaaactgagaatacaaacaaaagg 9262819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 39 - 117
Target Start/End: Original strand, 2061460 - 2061538
Alignment:
Q  39 acaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaaggt 117  Q
    |||||||||||||||||||| |  |||| |||| ||||||||||||| || | | ||| |||||||| |||||| ||||    
T  2061460 acaacaaattttattaaacagtcagatccctgcccaagacgaacagaaactgatgaaactgagaatacaaacaagaggt 2061538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 19814849 - 19814902
Alignment:
Q  43 caaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaa 96  Q
    ||||||||||| |||||   |||| ||||||||||||||||||||||| |||||    
T  19814849 caaattttatttaacaaccagatccctgctcaagacgaacagagaccgataaaa 19814902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 105
Target Start/End: Original strand, 53823084 - 53823120
Alignment:
Q  69 tgctcaagacgaacagagaccggtaaaattgagaata 105  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  53823084 tgctcaaaacgaacagagatcggtaaaattgagaata 53823120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 2e-19; HSPs: 11)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 37 - 114
Target Start/End: Original strand, 6726045 - 6726122
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaa 114  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||| |||| ||| |||||||| ||||||||    
T  6726045 aaacaacaaattttattaaacaaccagatctctgctcaagacgaacagagatcggtgaaactgagaatacaaacaaaa 6726122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 38 - 209
Target Start/End: Original strand, 24324425 - 24324604
Alignment:
Q  38 aacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaac--aaaaggt----tatccctg--acat 129  Q
    ||||||||||||||||||||||||  || | ||||||||||||| ||||| || | ||| |||||||| ||||  |||| ||    |||  |||  |||     
T  24324425 aacaacaaattttattaaacaattatatatttgctcaagacgaatagagatcgatgaaagtgagaatacaaacaaaaaacgtcatatatagctgaaacac 24324524  T
Q  130 ccaaaaataaacaccctaaaatcatccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttca 209  Q
    || ||||||||||| |||||| || || ||||||| || ||||| |||||||||||||| || ||||||||| |||||||    
T  24324525 ccgaaaataaacactctaaaaacacccttgaggacaacactcaccaaaatacacgtcaccacttaaaacagactccttca 24324604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 113
Target Start/End: Complemental strand, 33719413 - 33719344
Alignment:
Q  44 aaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaa 113  Q
    ||||||||||||||||   |||| |||||||||||||||||||| |||| ||| |||||||| |||||||    
T  33719413 aaattttattaaacaaccagatccctgctcaagacgaacagagatcggtgaaactgagaatacaaacaaa 33719344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 82
Target Start/End: Complemental strand, 44756022 - 44755977
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaac 82  Q
    ||||||||||||||||||||||| | |||| |||||||||||||||    
T  44756022 aaacaacaaattttattaaacaactagatccctgctcaagacgaac 44755977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 40 - 92
Target Start/End: Original strand, 47456703 - 47456754
Alignment:
Q  40 caacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggt 92  Q
    ||||||||||||||||| ||   ||||||||||||||||||||||||||||||    
T  47456703 caacaaattttattaaa-aaccagatctctgctcaagacgaacagagaccggt 47456754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 116
Target Start/End: Original strand, 48058325 - 48058377
Alignment:
Q  64 atctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||||||||||||| ||||||||||||| |||| ||||||| |||| |||||    
T  48058325 atctctgctcaagacaaacagagaccggtgaaatagagaatacaaacgaaagg 48058377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 111
Target Start/End: Complemental strand, 1321247 - 1321173
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaaca 111  Q
    |||||||||||||||||||||||    |||||| |||||||||||| |||| || | ||| |||||||| |||||    
T  1321247 aaacaacaaattttattaaacaaccacatctctactcaagacgaacggagatcgatgaaactgagaatacaaaca 1321173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 40292637 - 40292690
Alignment:
Q  38 aacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggt 92  Q
    ||||||||||||||||||| |||  |||| || ||||||||||||||||||||||    
T  40292637 aacaacaaattttattaaa-aatcagatccctcctcaagacgaacagagaccggt 40292690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 89
Target Start/End: Complemental strand, 5252761 - 5252720
Alignment:
Q  48 tttattaaacaatttgatctctgctcaagacgaacagagacc 89  Q
    ||||||||| ||||||||| || |||||||||||||||||||    
T  5252761 tttattaaaaaatttgatccctactcaagacgaacagagacc 5252720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 92
Target Start/End: Complemental strand, 28171733 - 28171684
Alignment:
Q  43 caaattttattaaacaatttgatctctgctcaagacgaacagagaccggt 92  Q
    ||||||||||||||  | |||||| |||| ||||||||||||||||||||    
T  28171733 caaattttattaaaatacttgatccctgcacaagacgaacagagaccggt 28171684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 116
Target Start/End: Original strand, 42532916 - 42532964
Alignment:
Q  68 ctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    |||||||||||||||||||||||||  || |||||||| || |||||||    
T  42532916 ctgctcaagacgaacagagaccggtggaactgagaatacaaccaaaagg 42532964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 37162 - 37084
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaag 115  Q
    |||||||||| ||||||||||||  ||||| ||||||||||||||||||||||||| ||| ||| |||| |||||||||    
T  37162 aaacaacaaaatttattaaacaacctgatccctgctcaagacgaacagagaccggtgaaactgataatacaaacaaaag 37084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 209
Target Start/End: Complemental strand, 37065 - 36981
Alignment:
Q  126 acatccaaaaataaacaccctaaaat-catccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttca 209  Q
    |||||| |||||||||||| |||||  || || |||||||||| | ||  |||||||||||||| |||||||||||| |||||||    
T  37065 acatccgaaaataaacaccataaaaaacacccatgaggaccacacccaacaaaatacacgtcaccacctaaaacagactccttca 36981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 47; Significance: 1e-17; HSPs: 12)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 126 - 220
Target Start/End: Original strand, 7195024 - 7195118
Alignment:
Q  126 acatccaaaaataaacaccctaaaatcatccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttcataaaaccaacc 220  Q
    ||||||||||||||||||||||||| || | ||| |||| || | ||| |||||||||||||| |||||||||||| ||||||| |||| |||||    
T  7195024 acatccaaaaataaacaccctaaaaacaccgctgcggacaacacccaccaaaatacacgtcaccacctaaaacagactccttcacaaaaacaacc 7195118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 116
Target Start/End: Original strand, 26405175 - 26405253
Alignment:
Q  38 aacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||||||||||||||||||||   ||| ||||||||||||||||| |||||||| ||| |||||||| ||||||||||    
T  26405175 aacaacaaattttattaaacaaccagatttctgctcaagacgaacaaagaccggtgaaactgagaatacaaacaaaagg 26405253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 116
Target Start/End: Complemental strand, 25992450 - 25992377
Alignment:
Q  43 caaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||| |||||||||||   |||||||||||||||||||||||||||||| ||| ||| |||| ||||||||||    
T  25992450 caaatattattaaacaaccagatctctgctcaagacgaacagagaccggtgaaaatgataatacaaacaaaagg 25992377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 38 - 105
Target Start/End: Complemental strand, 8297924 - 8297857
Alignment:
Q  38 aacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaata 105  Q
    |||| ||||||||||| ||||||  ||||||| |||||||||||||||||||||| ||| ||||||||    
T  8297924 aacagcaaattttattgaacaatcagatctctactcaagacgaacagagaccggtgaaactgagaata 8297857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 37 - 116
Target Start/End: Original strand, 26045589 - 26045668
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    |||||| |||||||||||||||| | ||||  ||||||| |||||||||||||||| || ||||| ||| ||||||||||    
T  26045589 aaacaataaattttattaaacaactagatcaatgctcaaaacgaacagagaccggtgaagttgagcatacaaacaaaagg 26045668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 14302171 - 14302249
Alignment:
Q  130 ccaaaaataaacaccctaaaatcatccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttc 208  Q
    ||||||||||| | ||||||| || |||||| ||| || | ||| |||||||||||||| |||||||||||||||||||    
T  14302171 ccaaaaataaaaatcctaaaaacacccctgatgacaacacccaccaaaatacacgtcaccacctaaaacagattccttc 14302249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 116
Target Start/End: Complemental strand, 5187387 - 5187318
Alignment:
Q  47 ttttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaagg 116  Q
    ||||||||||||| |  |||||||||||||| || |||||| |||| |||||||||||| ||||||||||    
T  5187387 ttttattaaacaactaaatctctgctcaagaagagcagagatcggtgaaattgagaatacaaacaaaagg 5187318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 105
Target Start/End: Original strand, 7391626 - 7391691
Alignment:
Q  40 caacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaata 105  Q
    |||||||||||||||||  ||  |||||||| ||||||||||||||||||||| ||| ||||||||    
T  7391626 caacaaattttattaaatcatcagatctctgttcaagacgaacagagaccggtgaaaatgagaata 7391691  T

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Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 126 - 210
Target Start/End: Original strand, 26045686 - 26045771
Alignment:
Q  126 acatccaaaaataaacaccct-aaaatcatccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttcat 210  Q
    ||||||||||||||||||||| |||| |  |||||||||| || | ||| ||||| |||||||| |||||||||||| | ||||||    
T  26045686 acatccaaaaataaacaccctaaaaaacgcccctgaggacaacacccaccaaaattcacgtcaccacctaaaacagacttcttcat 26045771  T

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Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 26405278 - 26405355
Alignment:
Q  133 aaaataaacaccctaaaatcatccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttcat 210  Q
    |||||||||||| ||||| || |||||||||| ||   ||| |||||||||||||| |||||||||||| | ||||||    
T  26405278 aaaataaacaccttaaaaacacccctgaggacaacaaccaccaaaatacacgtcaccacctaaaacagacttcttcat 26405355  T

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Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 133 - 209
Target Start/End: Complemental strand, 30097684 - 30097607
Alignment:
Q  133 aaaataaacaccctaaaat-catccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttca 209  Q
    ||||||||||||||||||  ||||| ||| ||| || | ||| |||||||||||||| |||||||||||| |||||||    
T  30097684 aaaataaacaccctaaaaaacatccatgatgacaacacccaccaaaatacacgtcaccacctaaaacagactccttca 30097607  T

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Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 117
Target Start/End: Original strand, 21391935 - 21391984
Alignment:
Q  68 ctgctcaagacgaacagagaccggtaaaattgagaataaaaacaaaaggt 117  Q
    |||||||||||||||| |||||||| ||| |||||||| |||| ||||||    
T  21391935 ctgctcaagacgaacaaagaccggtgaaactgagaatacaaactaaaggt 21391984  T

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Target: scaffold0119 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 105
Target Start/End: Original strand, 41796 - 41863
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaata 105  Q
    ||||||||||||||||| ||||||   ||||||| |||||||||| |||| ||||| ||||||||||||    
T  41796 aaacaacaaattttatttaacaatcaaatctctgttcaagacgaa-agaggccggtgaaattgagaata 41863  T

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Target: chr8 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 104
Target Start/End: Original strand, 43312281 - 43312348
Alignment:
Q  37 aaacaacaaattttattaaacaatttgatctctgctcaagacgaacagagaccggtaaaattgagaat 104  Q
    ||||||||||||||||| ||| |  || ||||||||||||||||| |||||||| | ||| |||||||    
T  43312281 aaacaacaaattttatttaaccacctggtctctgctcaagacgaatagagaccgatgaaactgagaat 43312348  T

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Target: chr8; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 17656466 - 17656542
Alignment:
Q  133 aaaataaacaccctaaaatcatccctgaggaccactctcactaaaatacacgtcactacctaaaacagattccttca 209  Q
    ||||| |||||||||||| || || ||||||| || | ||| ||||| |||||||| | |||||||||| |||||||    
T  17656466 aaaattaacaccctaaaaacacccttgaggacaacacccaccaaaattcacgtcaccatctaaaacagactccttca 17656542  T

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