View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6726_high_11 (Length: 291)

Name: NF6726_high_11
Description: NF6726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6726_high_11
NF6726_high_11
[»] scaffold0356 (1 HSPs)
scaffold0356 (7-269)||(17846-18108)
[»] scaffold0134 (1 HSPs)
scaffold0134 (7-269)||(5230-5498)
[»] chr2 (11 HSPs)
chr2 (14-269)||(24245812-24246074)
chr2 (7-269)||(24269040-24269309)
chr2 (14-279)||(27509361-27509633)
chr2 (19-279)||(27192481-27192748)
chr2 (19-279)||(27842295-27842562)
chr2 (7-279)||(17683789-17684068)
chr2 (7-269)||(21395350-21395619)
chr2 (7-264)||(41920148-41920412)
chr2 (7-264)||(28666147-28666411)
chr2 (7-264)||(37824981-37825245)
chr2 (7-200)||(35609665-35609865)
[»] chr5 (16 HSPs)
chr5 (7-269)||(25542763-25543032)
chr5 (7-266)||(14192785-14193051)
chr5 (15-263)||(17871613-17871868)
chr5 (7-269)||(39883163-39883432)
chr5 (7-264)||(37372916-37373180)
chr5 (7-269)||(27881064-27881333)
chr5 (7-264)||(8428549-8428813)
chr5 (12-269)||(3689962-3690226)
chr5 (12-269)||(3876561-3876825)
chr5 (7-145)||(24629962-24630100)
chr5 (7-269)||(37261295-37261552)
chr5 (7-145)||(10025043-10025181)
chr5 (7-145)||(30346645-30346783)
chr5 (231-269)||(10025189-10025227)
chr5 (231-269)||(30346599-30346637)
chr5 (16-49)||(6089199-6089232)
[»] chr4 (9 HSPs)
chr4 (7-269)||(1860657-1860926)
chr4 (7-269)||(49710153-49710421)
chr4 (7-264)||(35855887-35856151)
chr4 (7-264)||(38518076-38518340)
chr4 (7-264)||(49786803-49787067)
chr4 (7-145)||(55559139-55559277)
chr4 (112-264)||(13337320-13337479)
chr4 (193-287)||(618176-618270)
chr4 (231-278)||(55559084-55559131)
[»] scaffold0017 (1 HSPs)
scaffold0017 (19-269)||(186546-186803)
[»] scaffold1139 (1 HSPs)
scaffold1139 (12-269)||(985-1249)
[»] chr3 (13 HSPs)
chr3 (7-267)||(10110580-10110847)
chr3 (7-267)||(10000387-10000654)
chr3 (7-269)||(50410152-50410417)
chr3 (7-279)||(10968742-10969020)
chr3 (16-268)||(13530028-13530287)
chr3 (7-265)||(10237536-10237800)
chr3 (7-265)||(52918046-52918310)
chr3 (18-269)||(11368638-11368897)
chr3 (7-264)||(32751-33015)
chr3 (12-287)||(11362243-11362526)
chr3 (7-194)||(46913051-46913245)
chr3 (12-269)||(10038625-10038879)
chr3 (7-145)||(47692949-47693087)
[»] chr7 (10 HSPs)
chr7 (7-278)||(5828516-5828794)
chr7 (16-269)||(21070032-21070292)
chr7 (15-263)||(22843792-22844047)
chr7 (7-264)||(7036700-7036964)
chr7 (7-269)||(9001115-9001384)
chr7 (7-264)||(12781123-12781388)
chr7 (7-264)||(12785953-12786217)
chr7 (7-145)||(42232064-42232202)
chr7 (149-194)||(18939139-18939184)
chr7 (231-269)||(42232210-42232248)
[»] chr6 (8 HSPs)
chr6 (7-279)||(2202139-2202418)
chr6 (7-287)||(18344105-18344392)
chr6 (15-263)||(30881315-30881570)
chr6 (7-269)||(10187524-10187793)
chr6 (7-269)||(15333623-15333892)
chr6 (12-264)||(29640003-29640262)
chr6 (12-264)||(31510174-31510433)
chr6 (7-145)||(12517368-12517506)
[»] chr1 (11 HSPs)
chr1 (7-279)||(2453077-2453356)
chr1 (7-269)||(36207195-36207464)
chr1 (7-269)||(2329149-2329415)
chr1 (7-269)||(16042005-16042274)
chr1 (14-267)||(18148675-18148935)
chr1 (12-264)||(37390127-37390386)
chr1 (7-264)||(6310969-6311234)
chr1 (7-269)||(48775305-48775574)
chr1 (18-197)||(48238519-48238705)
chr1 (7-145)||(52500649-52500787)
chr1 (149-287)||(48233507-48233645)
[»] scaffold0262 (1 HSPs)
scaffold0262 (12-269)||(18991-19255)
[»] chr8 (6 HSPs)
chr8 (7-269)||(21113714-21113983)
chr8 (7-264)||(25218540-25218804)
chr8 (7-264)||(30307157-30307421)
chr8 (7-264)||(7821818-7822082)
chr8 (15-233)||(31978533-31978758)
chr8 (7-264)||(25209022-25209271)
[»] scaffold0073 (2 HSPs)
scaffold0073 (7-269)||(31913-32181)
scaffold0073 (7-233)||(19437-19670)
[»] scaffold0002 (1 HSPs)
scaffold0002 (7-264)||(321311-321575)
[»] scaffold0550 (1 HSPs)
scaffold0550 (7-269)||(542-811)
[»] scaffold0003 (2 HSPs)
scaffold0003 (12-269)||(182796-183060)
scaffold0003 (12-287)||(165515-165798)
[»] scaffold0090 (1 HSPs)
scaffold0090 (7-264)||(48911-49175)
[»] scaffold0025 (1 HSPs)
scaffold0025 (7-225)||(16664-16889)
[»] scaffold0118 (2 HSPs)
scaffold0118 (7-145)||(28735-28873)
scaffold0118 (231-269)||(28689-28727)
[»] scaffold0888 (1 HSPs)
scaffold0888 (12-124)||(24-136)
[»] scaffold0107 (1 HSPs)
scaffold0107 (201-269)||(39937-40005)
[»] scaffold1424 (1 HSPs)
scaffold1424 (7-82)||(1628-1703)


Alignment Details
Target: scaffold0356 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: scaffold0356
Description:

Target: scaffold0356; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 18108 - 17846
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18108 ggacatcataattttcacccgatcggcaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 18009  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttgagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacg 206  Q
    |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18008 aactaaatcaagcgttggtgcgagtattcccctttcttgagcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacg 17909  T
Q  207 gatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  17908 gatttgttgtgtccgatatgagcaaatcttcaggaacttctaccttcatttcaccattctcat 17846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 5498 - 5230
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  5498 ggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagtgacatcatatattcgttaacatgctc 5399  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgaca 200  Q
    |||||||||||||||||||||||||||||||||||||||      |||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  5398 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgaca 5299  T
Q  201 tcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    ||||  |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  5298 tcaatagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcaccattctcat 5230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 213; Significance: 1e-117; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 14 - 269
Target Start/End: Original strand, 24245812 - 24246074
Alignment:
Q  14 agaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 113  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24245812 agaattttcacccgatcgacaaacagaatcagatcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 24245911  T
Q  114 tcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacg 206  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||    
T  24245912 tcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaggtctataagtgacatccacg 24246011  T
Q  207 gatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  24246012 gatttgttgtgtccgttatgagcaaatctttaggaatttctaccttcatttcaccattctcat 24246074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 24269309 - 24269040
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24269309 ggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttc 24269210  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24269209 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgac 24269110  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||| |||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  24269109 atcaacagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcaccattctcat 24269040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 14 - 279
Target Start/End: Original strand, 27509361 - 27509633
Alignment:
Q  14 agaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 113  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27509361 agaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 27509460  T
Q  114 tcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacg 206  Q
    |||||||||| |||||||||||||||||||||       ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  27509461 tcaagcgttgatgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgatatcaacg 27509560  T
Q  207 gatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtc 279  Q
     ||||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||||| ||| |||||    
T  27509561 aatttgttgtgtccgacatgagcaaatctttaggaatttctaccttcatctcaccattctcatctgaagcgtc 27509633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 27192481 - 27192748
Alignment:
Q  19 tttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 118  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  27192481 tttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgctcaactgaatcaag 27192580  T
Q  119 cgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggattt 211  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27192581 cgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacagattt 27192680  T
Q  212 gttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtc 279  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  27192681 gttgtgtccgatatgagcaaatctttaggaatttctaccttcatttcaccattctcatctgaagcgtc 27192748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 206; E-Value: 1e-113
Query Start/End: Original strand, 19 - 279
Target Start/End: Original strand, 27842295 - 27842562
Alignment:
Q  19 tttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 118  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  27842295 tttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcatatattcgttaacatgctcaactgaatcaag 27842394  T
Q  119 cgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggattt 211  Q
    |||||||||||||||||||||||||||       || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  27842395 cgttggtgcgagtattcccctttcttggaaaaatagagggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacagattt 27842494  T
Q  212 gttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtc 279  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||    
T  27842495 gttgtgtccgatatgagcaaatctttaggaatttctaccttcatttcaccattctcatctgaagcgtc 27842562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 7 - 279
Target Start/End: Complemental strand, 17684068 - 17683789
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17684068 ggacatcaaaattttcacccgatcgacaaacaaaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 17683969  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    || ||||||||||||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17683968 aattgaatcaagcgttggagcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 17683869  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtc 279  Q
    ||||||||||||||||||||| |||||||| ||| || ||||| |||||||||||||| ||||||||||| ||| |||||    
T  17683868 atcaacggatttgttgtgtccaatatgagcgaatattcaggaatttctaccttcattttaccattctcatctgaagcgtc 17683789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 21395350 - 21395619
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  21395350 ggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 21395449  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||| |||||||||||||| |||    
T  21395450 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatatacaaagtctataagcgac 21395549  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  21395550 atcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcaccattctcat 21395619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 41920412 - 41920148
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| | ||| ||||||| || ||||||||||||| ||||||||||||||||  ||||||||| |||||||||||||||     
T  41920412 ggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttatcttcacctggaatcaacgacatcataaattcgttaacatgctt 41920313  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    || |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  41920312 aattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgac 41920213  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||    
T  41920212 atcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 41920148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 28666411 - 28666147
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| |||||||||||||| |||| | ||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  28666411 ggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgctc 28666312  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    || |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  28666311 aattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtgac 28666212  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||||||||||||    
T  28666211 atcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 28666147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 37825245 - 37824981
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| |||||||||||||| |||| | ||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  37825245 ggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgctc 37825146  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    || |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  37825145 aattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacagagtctataagtgac 37825046  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||||||||||||    
T  37825045 atcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 37824981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 7 - 200
Target Start/End: Original strand, 35609665 - 35609865
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  35609665 ggacatcagaattttcactcgatcgacaaacataatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatactc 35609764  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  35609765 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaatgttatcattcaaatcggaatacacaaagtctataagtgac 35609864  T
Q  200 a 200  Q
    |    
T  35609865 a 35609865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 25543032 - 25542763
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25543032 ggacatcataattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 25542933  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25542932 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 25542833  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    ||||||  ||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||    
T  25542832 atcaacatatttgttgtgtccgatatgagaaaatcttcaggaatttctaccttcatttcaccattctcat 25542763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 7 - 266
Target Start/End: Complemental strand, 14193051 - 14192785
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14193051 ggacatcagaattttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 14192952  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||| ||||||||||||||||||||||||||||||       ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14192951 aactgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcggatcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 14192852  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattct 266  Q
    |||||| |||||||||||||||||||||||||||||| || || |||||||||||||||||||||||    
T  14192851 atcaacagatttgttgtgtccgatatgagcaaatcttcagaaatttctaccttcatttcaccattct 14192785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 15 - 263
Target Start/End: Complemental strand, 17871868 - 17871613
Alignment:
Q  15 gaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaat 114  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  17871868 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 17871769  T
Q  115 caagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacgg 207  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  17871768 caagcgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacgg 17871669  T
Q  208 atttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccat 263  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  17871668 atttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcaccat 17871613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 39883163 - 39883432
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| |||| |||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||||| ||||||||||||||||    
T  39883163 ggacatcataattgtcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcaacgacatcataaattcgttaacatgctc 39883262  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||| || |||||||||||||||||| ||||||||||||||||||||||||||||    
T  39883263 aactgaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagatcgggatacacaaagtctataagtgac 39883362  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||||||    
T  39883363 atcaacggatttgttgtgtccgatatcagcaaatctttaggaatatctaccttcatttcaccattctcat 39883432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 37372916 - 37373180
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| |||||||| |||||||||| | ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  37372916 ggacatcagaattatcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcataaattggttaacatgctc 37373015  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    ||||||||||||||||||||||||||||||||||||||        ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37373016 aactgaatcaagcgttggtgcgagtattcccctttcttcgaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgac 37373115  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    ||||||||||||||| |||| ||||| |||||||||| ||||| |||||||||||||||||||||    
T  37373116 atcaacggatttgttatgtctgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 37373180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 27881064 - 27881333
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  27881064 ggacatcataattttcacccgatctacaaatagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgctc 27881163  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    | |||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  27881164 agctgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgac 27881263  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||||||| ||||||||| |||||||||| ||||  ||||||||| ||||||||||| ||||    
T  27881264 atcaacggatttgttgggtccgatatcagcaaatcttcaggagtttctacctttatttcaccattgtcat 27881333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 8428813 - 8428549
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||| ||||||||||| | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  8428813 ggacatcagaatattcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 8428714  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    || |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  8428713 aattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgac 8428614  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||    
T  8428613 atcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 8428549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 12 - 269
Target Start/End: Original strand, 3689962 - 3690226
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 111  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||| |    
T  3689962 tcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaaccg 3690061  T
Q  112 aatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 204  Q
    |||||||||||||||||||||||| | ||||||       ||| |||||||||| ||||||||||||||||||||| |||||||| || |||||||||||    
T  3690062 aatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtcaccaatgttatcattcaaatcgggatatacaaagtccattagtgacatcaa 3690161  T
Q  205 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    || ||||||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  3690162 cgaatttgttgtatcggatatgagcaaatctttgggaatttctaccttcatttcaccattctcat 3690226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 12 - 269
Target Start/End: Complemental strand, 3876825 - 3876561
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 111  Q
    ||||||||||| |||||||||||||| |||||| |||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||| |    
T  3876825 tcagaattttcgcccgatcgacaaactgaatcagagcttaaatactctttctctccacttggaatcactgacatcatatattcgttaacatgctcaaccg 3876726  T
Q  112 aatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 204  Q
    |||||||||||||||||||||||| | ||||||       ||| ||||| |||| ||||||||||||||||||||| |||||||| || |||||||||||    
T  3876725 aatcaagcgttggtgcgagtattcacttttcttgaaaaaagagtgggtccccaatgttatcattcaaatcgggatatacaaagtccattagtgacatcaa 3876626  T
Q  205 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    || ||||||||| || ||||||||||||||||| |||| ||||||||||||||||||||||||||    
T  3876625 cgaatttgttgtatcggatatgagcaaatctttgggaatttctaccttcatttcaccattctcat 3876561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 24630100 - 24629962
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  24630100 ggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttc 24630001  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg 145  Q
    |||||||||||||||||||||||||||||||||||||||    
T  24630000 aactgaatcaagcgttggtgcgagtattcccctttcttg 24629962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 37261295 - 37261552
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||| ||||||    
T  37261295 ggacatcaaaattttcacccgatcgacaaacagaatcagagcttaaatactatttctcttcacctggaatcagtgacatcatatattcattaatatgctc 37261394  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||| ||||| || |||||||||||||||||       | |||||||  ||||||||||||||||| ||||||||||||          |||    
T  37261395 aactgaatcaagtgttggcgcaagtattcccctttcttgaaaaaataacgggtcattaaggttatcattcaaattgggatacacaaa----------gac 37261484  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    ||||||||  ||||||||||| |||| ||||||||||  | || || ||||||| |||||||||||||||    
T  37261485 atcaacgg--ttgttgtgtccaatataagcaaatcttcggaaatttataccttcgtttcaccattctcat 37261552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 10025043 - 10025181
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||    
T  10025043 ggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacttggaatcaatgacatcatatattcgttaacatgttc 10025142  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg 145  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10025143 aactgaatcaagcgttggtgcgagtattcccctttcttg 10025181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 30346783 - 30346645
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  30346783 ggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttc 30346684  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg 145  Q
    |||| ||||||| ||||||||||||||||||||||||||    
T  30346683 aacttaatcaagtgttggtgcgagtattcccctttcttg 30346645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 10025189 - 10025227
Alignment:
Q  231 aatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  10025189 aatctttaggaatttctaccttcatttcaccattctcat 10025227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 30346637 - 30346599
Alignment:
Q  231 aatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  30346637 aatcttcaggaatttctaccttcatttcaccattctcat 30346599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 49
Target Start/End: Original strand, 6089199 - 6089232
Alignment:
Q  16 aattttcacccgatcgacaaacagaatcaaagct 49  Q
    ||||||||||||||||||||||||||||| ||||    
T  6089199 aattttcacccgatcgacaaacagaatcagagct 6089232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 212; Significance: 1e-116; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 1860657 - 1860926
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  1860657 ggacatcagaattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcacccagaatcagtgacatcatatattcgttaacatgctc 1860756  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  1860757 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgac 1860856  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1860857 atcaacagatttgttgtgtccgatatgagcaaatctttaggaatttctaccttcatttcaccattctcat 1860926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 49710153 - 49710421
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  49710153 ggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 49710252  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  49710253 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgac 49710352  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    ||||| |||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||| ||||    
T  49710353 atcaa-ggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcaccattttcat 49710421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 35855887 - 35856151
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  35855887 ggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 35855986  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35855987 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgac 35856086  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||    
T  35856087 atcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 35856151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 38518076 - 38518340
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| | ||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  38518076 ggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 38518175  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    || ||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  38518176 aattgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatttagatcgggatacacaaagtctataagtgac 38518275  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||    
T  38518276 atcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 38518340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 49787067 - 49786803
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| |||||||||||||| |||| | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||    
T  49787067 ggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaatatgctc 49786968  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    || |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  49786967 aattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtgac 49786868  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||    
T  49786867 atcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 49786803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 55559277 - 55559139
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  55559277 ggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttc 55559178  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg 145  Q
    |||||||||||||||||||||||||||||||||||||||    
T  55559177 aactgaatcaagcgttggtgcgagtattcccctttcttg 55559139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 112 - 264
Target Start/End: Original strand, 13337320 - 13337479
Alignment:
Q  112 aatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 204  Q
    |||||||||||| |||||||||||||||||||||       ||  |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  13337320 aatcaagcgttgatgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgacataaa 13337419  T
Q  205 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    ||||||||||||||||||||| |||||||||| | ||| |||||||||||||||||||||    
T  13337420 cggatttgttgtgtccgatatcagcaaatcttcatgaatttctaccttcatttcaccatt 13337479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 193 - 287
Target Start/End: Complemental strand, 618270 - 618176
Alignment:
Q  193 aagtgacatcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtctttgtcgt 287  Q
    ||||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| || || |||||||    
T  618270 aagtgacatgaacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcaccattctcatctgaagcttcgttgtcgt 618176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 231 - 278
Target Start/End: Complemental strand, 55559131 - 55559084
Alignment:
Q  231 aatctttaggaacttctaccttcatttcaccattctcatatgacgcgt 278  Q
    |||||| ||||| |||||||||||||||||||||||||| ||| ||||    
T  55559131 aatcttcaggaatttctaccttcatttcaccattctcatctgaagcgt 55559084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 269
Target Start/End: Original strand, 186546 - 186803
Alignment:
Q  19 tttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaag 118  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  186546 tttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcagctgaatcaag 186645  T
Q  119 cgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggattt 211  Q
    ||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  186646 cgttggtgcgagtattcccctttattggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacagattt 186745  T
Q  212 gttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    ||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  186746 gttgtgtacgatatgagcaaatcttcaggaatttctaccttcatttcaccattctcat 186803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1139 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: scaffold1139
Description:

Target: scaffold1139; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 12 - 269
Target Start/End: Original strand, 985 - 1249
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 111  Q
    ||||||||||| |||||| |||||||| ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  985 tcagaattttcgcccgattgacaaacaaaatcagagcttaaatactctttctcttcacttggaatcagtgacatcatatattcgttaacatgctcgactg 1084  T
Q  112 aatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 204  Q
    ||| ||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1085 aattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 1184  T
Q  205 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  1185 cggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcaccattctcat 1249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 202; Significance: 1e-110; HSPs: 13)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 7 - 267
Target Start/End: Original strand, 10110580 - 10110847
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10110580 ggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 10110679  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  10110680 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtgac 10110779  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctc 267  Q
    |||||| ||||||||| ||| |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  10110780 atcaacagatttgttgcgtctgatatgagcaaatcttcaggaatttctaccttcatttcaccattctc 10110847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 7 - 267
Target Start/End: Original strand, 10000387 - 10000654
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10000387 ggacatcagaattttcacccgatcaacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 10000486  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||| |||||||||||||| |||||||     
T  10000487 aactgaatcaagcgttggtgcgagtattcctctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtgat 10000586  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctc 267  Q
    |||||| |||||||||  || |||||||||||||||| ||||| ||||||||||||||||||||||||    
T  10000587 atcaacagatttgttgcatctgatatgagcaaatcttcaggaatttctaccttcatttcaccattctc 10000654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 50410152 - 50410417
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50410152 ggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatatttgttaacatgctc 50410251  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
     ||||||||||||||||||||||||||||||||||||||       || ||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  50410252 gactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtgggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtgac 50410351  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||| |||||||||||||||||||||||| ||||||| ||||| ||    ||||||||||||||||||||    
T  50410352 atcagcggatttgttgtgtccgatatgagaaaatcttcaggaattt----cttcatttcaccattctcat 50410417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 7 - 279
Target Start/End: Complemental strand, 10969020 - 10968742
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  10969020 ggacatcagaattttcacccgatcgacaaacaaaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgcta 10968921  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||| |||        ||| |||||| ||| ||||||||||||||||||||||||||||||||||||| |    
T  10968920 aactgaatcaagcgttggtgcgagtattccccttgcttagaaaaatagcaggtcacgaagtttatcattcaaatcgggatacacaaagtctataagtggc 10968821  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtc 279  Q
    |||||||||||||||||||||||||| |||||||| | || || |||||||||||||||||||||||||| ||| |||||    
T  10968820 atcaacggatttgttgtgtccgatatcagcaaatc-tcagaaatttctaccttcatttcaccattctcatctgaagcgtc 10968742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 16 - 268
Target Start/End: Original strand, 13530028 - 13530287
Alignment:
Q  16 aattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatc 115  Q
    |||||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||     
T  13530028 aattttcacctgatcgacaagcagaaccagagcttaaatactctttctcttcacctggactcagtgacatcatatattcgttaaaatgctcaactgaatg 13530127  T
Q  116 aagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacgga 208  Q
    ||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13530128 aagtgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacgga 13530227  T
Q  209 tttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctca 268  Q
    ||||||||||| ||||||| ||||||||   ||| |||||||||||||||||||||||||    
T  13530228 tttgttgtgtctgatatgaccaaatcttctagaatttctaccttcatttcaccattctca 13530287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 7 - 265
Target Start/End: Original strand, 10237536 - 10237800
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10237536 ggacatcagaattttcacccgatcaacaaacataatcaaagcttaa-tactctttctcttcacctggaatcagtaacatcatatattcgttaacatgctc 10237634  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  10237635 aactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctgtaagtgac 10237734  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattc 265  Q
    |||||| ||||||||| ||| ||||||||||| |||| ||||| ||||||| | ||||||||||||    
T  10237735 atcaacagatttgttgcgtctgatatgagcaattcttcaggaatttctaccgttatttcaccattc 10237800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 7 - 265
Target Start/End: Original strand, 52918046 - 52918310
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  52918046 ggacatcagaattttcacccgatcgacaaacaaaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 52918145  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||| ||||||||||||||||       |||| ||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  52918146 aactgaatcaagcgttggtgcgggtattcccctttcttggaaaaatagcgagtcaccaaggttatcattcaaatcgggatacacgaagtctataagtggc 52918245  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattc 265  Q
    |||||| ||||||||||||||| ||   ||||||| | ||||| ||||||||||||||||||||||    
T  52918246 atcaacagatttgttgtgtccggtaacggcaaatc-tcaggaatttctaccttcatttcaccattc 52918310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 18 - 269
Target Start/End: Original strand, 11368638 - 11368897
Alignment:
Q  18 ttttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaa 117  Q
    ||||||||| |||||||||  |||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  11368638 ttttcacccaatcgacaaattgaatcagagcttaaatactctttctcttcacctggaatcactgacatcatatattcgttaacatgctcaaccgaatcaa 11368737  T
Q  118 gcgttggtgcgagtattcccctttctt--------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggat 209  Q
    |||||||||||||||||||| ||||||        |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  11368738 gcgttggtgcgagtattcccttttcttggaaaaaagagcgggtcaccaatgttatcattcaaatcgggatatacaaagtctatgagtgacatcaacggat 11368837  T
Q  210 ttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||| ||||||||||||||||  |||| |||||| |||||||||||||||||||    
T  11368838 ttgttgtgtcggatatgagcaaatcttcgggaatttctacattcatttcaccattctcat 11368897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 32751 - 33015
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| | ||| ||||||| || ||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  32751 ggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgctc 32850  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  32851 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtccataagtgac 32950  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||||||||||||    
T  32951 atcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 33015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 11362243 - 11362526
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatac-tctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 110  Q
    ||||| ||||| |||||||||||||| |||||| |||||||| |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  11362243 tcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctcaacc 11362342  T
Q  111 gaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatca 203  Q
    ||||||||||||||||||||||||||| |||||||       || |||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||    
T  11362343 gaatcaagcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgacatca 11362442  T
Q  204 acggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtctttgtcgt 287  Q
    ||| ||||||||| || |||||||| |||||||  |||| |||  |||||||||||||||||||||  || ||||| |||||||    
T  11362443 acgaatttgttgtatcggatatgagtaaatcttcgggaatttcccccttcatttcaccattctcattcgaagcgtcgttgtcgt 11362526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 46913051 - 46913245
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||| | ||||||||||||||| |||||||||||||||||| ||| ||||||||||||||  ||||||||||||||||||||||||||||    
T  46913051 ggacatcagaatttccccccgatcgacaaacataatcaaagcttaaatactatttttcttcacctggaattggtgacatcatatattcgttaacatgctc 46913150  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataa 194  Q
    ||||||||||||||||||||||||||||| |||||||||       |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  46913151 aactgaatcaagcgttggtgcgagtattctcctttcttggaaaaatagcgggtcgccaaagttatcattcaaatcgggatacacaaagtctataa 46913245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 12 - 269
Target Start/End: Original strand, 10038625 - 10038879
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 111  Q
    ||||||||||||||||||||||||||||||| | |||||||||| | |||||||||||||||||||||||||||||||||||| |||| |||||||| ||    
T  10038625 tcagaattttcacccgatcgacaaacagaatgagagcttaaataatatttctcttcacctggaatcagtgacatcatatattcattaatatgctcaattg 10038724  T
Q  112 aatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 204  Q
    ||||||| ||||| ||||||||||||||||||||       |||||||||| ||||||||||||||||| ||||||||||||          ||||||||    
T  10038725 aatcaagtgttggcgcgagtattcccctttcttggaaaaatagcgggtcactaaggttatcattcaaattgggatacacaaa----------gacatcaa 10038814  T
Q  205 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    | ||||||||||||| ||||| ||||||||||    || || ||||||| |||||||||||||||    
T  10038815 cagatttgttgtgtctgatataagcaaatcttcgaaaatttataccttcgtttcaccattctcat 10038879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 47692949 - 47693087
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| |||||||||||  |||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  47692949 ggacatcagaattttcgtccgatcgacaaacagaatcagaggttaaatactctttctcttcacctggaattagtgacatcatgtattcgttaacatgctc 47693048  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg 145  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  47693049 aactgaatcaagcgttggtgcgaggattcccctttcttg 47693087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 201; Significance: 1e-110; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 7 - 278
Target Start/End: Complemental strand, 5828794 - 5828516
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5828794 ggacatcataattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 5828695  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||| ||||| ||||||||||||||||||||||||||       |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5828694 aactgagtcaagtgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgagatacacaaagtctataagtgac 5828595  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgt 278  Q
    |||||  |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| ||||    
T  5828594 atcaaaagatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcaccattctcatctgaagcgt 5828516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 16 - 269
Target Start/End: Complemental strand, 21070292 - 21070032
Alignment:
Q  16 aattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatc 115  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21070292 aattttcacccgatcaacaaacagaatcagagcttaaatactctttctcttcaccaggaatcagtgacatcatatattcgttaacatgctcaactgaatc 21070193  T
Q  116 aagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacgga 208  Q
    ||||||||||||||||||||||||||||||       ||| ||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  21070192 aagcgttggtgcgagtattcccctttcttggaaaaatagcaggttaccaaggttatcattcagatcgggatacacaaagtctataagtgacatcaacgga 21070093  T
Q  209 tttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    ||||||||||| |||||||||||||||| ||||| ||||||||||||||||||||||||||    
T  21070092 tttgttgtgtctgatatgagcaaatcttcaggaatttctaccttcatttcaccattctcat 21070032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 15 - 263
Target Start/End: Original strand, 22843792 - 22844047
Alignment:
Q  15 gaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaat 114  Q
    ||||||||||||||||||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  22843792 gaattttcacccgatcgacaaacagaaacagaacttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 22843891  T
Q  115 caagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacgg 207  Q
    |||||||||||||||||||||||||||||||       ||| ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||| |    
T  22843892 caagcgttggtgcgagtattcccctttcttggaaaaatagcaggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacag 22843991  T
Q  208 atttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccat 263  Q
    |||||||||||| |||||||||||||||| | ||| ||||||||||||||||||||    
T  22843992 atttgttgtgtcagatatgagcaaatcttcaagaatttctaccttcatttcaccat 22844047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 7036700 - 7036964
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  7036700 ggacatcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 7036799  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  7036800 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaagtagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgac 7036899  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||| ||||| ||| |||||| ||||| |||||||||||||||||||||    
T  7036900 atcaacggatttgttgtgtctgatatcagcgaatcttcaggaatttctaccttcatttcaccatt 7036964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 9001384 - 9001115
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  9001384 ggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgctc 9001285  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||| ||||||||||||||||||||||       ||  ||||||||||||||||| ||| ||||||||| |||||||||||||| |||    
T  9001284 aactgaatcaagcgttagtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcaatcagatcgggataaacaaagtctataagagac 9001185  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||||||||||||||||| | |||||||| | ||| ||||||||||||||||||||||||||    
T  9001184 atcaacggatttgttgtgtccgatatcaacaaatcttcaagaatttctaccttcatttcaccattctcat 9001115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 12781388 - 12781123
Alignment:
Q  7 ggacctcagaattttcacccgatcg-acaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 105  Q
    |||| |||||||||||||||||||  | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  12781388 ggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 12781289  T
Q  106 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 198  Q
    ||||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12781288 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 12781189  T
Q  199 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||||  |||| |||||||||| ||||| |||||||||||||||||||||    
T  12781188 catcaacggatttgttgtgtcttatatcagcaaatcttcaggaatttctaccttcatttcaccatt 12781123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 12786217 - 12785953
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| |||||||||||||| |||| | ||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  12786217 ggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgctc 12786118  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    || |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  12786117 aattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtgac 12786018  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||||||||||||    
T  12786017 atcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 12785953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 42232064 - 42232202
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||| ||||||||| ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  42232064 ggacatcagaattttcacccgagcgacaaacaaaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttc 42232163  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg 145  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  42232164 aactgaatcaagcgttggtgagagtattcccctttcttg 42232202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 18939139 - 18939184
Alignment:
Q  149 gggtcaccaaggttatcattcaaatcgggatacacaaagtctataa 194  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||    
T  18939139 gggttaccaaagttatcattcaaatcgggatacacaaagtttataa 18939184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 269
Target Start/End: Original strand, 42232210 - 42232248
Alignment:
Q  231 aatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  42232210 aatcttcaggaatttctaccttcatttcaccattctcat 42232248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 8)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 7 - 279
Target Start/End: Complemental strand, 2202418 - 2202139
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  2202418 ggacatcagaattttcacccgatcgacaaatagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttc 2202319  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
     ||||||| ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2202318 tactgaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 2202219  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtc 279  Q
    |||||||||||| |||||| |||||||||||||||||  |||| |||||| ||||||||||||||||||| ||| |||||    
T  2202218 atcaacggatttattgtgttcgatatgagcaaatcttcgggaatttctacattcatttcaccattctcatttgaagcgtc 2202139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 7 - 287
Target Start/End: Original strand, 18344105 - 18344392
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| ||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||    
T  18344105 ggacatcaaaattttcacccgatcgacaaatagaatcaaagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgtcaacatgctc 18344204  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    ||||||||||||||||||||| |||||||||||||||||       ||  ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18344205 aactgaatcaagcgttggtgcaagtattcccctttcttggaaaaatagatggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 18344304  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtctttgtcgt 287  Q
    || |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||| || || |||||||    
T  18344305 atgaacggatttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcactattctcatctgaagcttcgttgtcgt 18344392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 15 - 263
Target Start/End: Original strand, 30881315 - 30881570
Alignment:
Q  15 gaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaat 114  Q
    ||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  30881315 gaattttcacccgatcgacaaacagaaccagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaacagaat 30881414  T
Q  115 caagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacgg 207  Q
    |||||||||||||||||||| ||||||||||       ||||||||||||||||||||||| |||||| ||||||||| |||||||||||||||||||||    
T  30881415 caagcgttggtgcgagtatttccctttcttggaaaaatagcgggtcaccaaggttatcatttaaatcgagatacacaatgtctataagtgacatcaacgg 30881514  T
Q  208 atttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccat 263  Q
    ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  30881515 atttgttgtgtccgatatgagcaaatcttcaggaatttctaccttcatttcaccat 30881570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 10187524 - 10187793
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10187524 ggacatcaaaattttcacccgatcgacaaacagaatcatagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 10187623  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    || ||||||||| ||||| |||||||||||| |||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10187624 aattgaatcaagtgttggagcgagtattcccttttcttggaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 10187723  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||| |||||||| |||||||||||| || ||||| |||||||||||||| |||||||||||    
T  10187724 atcaacggattttttgtgtccaatatgagcaaatattcaggaatttctaccttcattttaccattctcat 10187793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 15333623 - 15333892
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| |||||||||||||| |||| ||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  15333623 ggacatcagaattttcacctgatctacaaacagaatcagagcctaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 15333722  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||| |||||||||||||||||| ||| |||       ||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  15333723 aactgaatcaagtgttggtgcgagtattcccatttgttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctattagtgac 15333822  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||||||  || |||||| | |||||||| ||||| ||||||||||||||||| ||||||||    
T  15333823 atcaacggatttgttacgtacgatatcaacaaatcttcaggaatttctaccttcatttcactattctcat 15333892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 29640262 - 29640003
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 111  Q
    ||||||||||||||||||| | ||| ||||| | || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  29640262 tcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaactg 29640163  T
Q  112 aatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 204  Q
    ||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  29640162 aatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcaggatacacaaagtctataagtgacatcaa 29640063  T
Q  205 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    | |||||||||||   ||||| |||||||||| ||||| |||||||||||||||||||||    
T  29640062 cagatttgttgtggttgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 29640003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 31510433 - 31510174
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 111  Q
    ||||||||||||||||||| | ||| ||||| | || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  31510433 tcagaattttcacccgatctaaaaatagaattagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaactg 31510334  T
Q  112 aatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 204  Q
    ||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||  |||||||||||||||||||||||||||||    
T  31510333 aatcaagcgttggtgcgagtattcccctttcttgaaaaaatagttggtcaccaaggttatcattcagattaggatacacaaagtctataagtgacatcaa 31510234  T
Q  205 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    | |||||||||||   ||||| |||||||||| || || |||||||||||||||||||||    
T  31510233 cagatttgttgtggttgatatcagcaaatcttaagaaatttctaccttcatttcaccatt 31510174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 12517368 - 12517506
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||| |||  |||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  12517368 ggacatcagaattttcaccccatcatcaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 12517467  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg 145  Q
    ||||||||||||||||||||| | |||||||||||||||    
T  12517468 aactgaatcaagcgttggtgcaaatattcccctttcttg 12517506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 198; Significance: 1e-108; HSPs: 11)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 7 - 279
Target Start/End: Complemental strand, 2453356 - 2453077
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2453356 ggacatcagaattttcacccgatcgacaaatagaatcagagcctaaatactctttctcttcacctggaattagtgacatcatatattcgttaacatgctc 2453257  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||| ||| ||||||||||||||||||||||||||||||       ||||||||||||||||||||||||||||||| || |||||||||||||||||||    
T  2453256 aactcaataaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaatcggaattcacaaagtctataagtgac 2453157  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtc 279  Q
    ||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||| |||||    
T  2453156 atcaacggatttgttgtgttcgatatgagcaaatcttcaggaatttctaccttcatttcaccattctcatttgaagcgtc 2453077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 36207195 - 36207464
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36207195 ggacatcataattttcacccgatcgacaaacataatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 36207294  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||  ||||| ||||||||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36207295 aactgaatcaattgttggggcgagtattcccctttcttgaaaaaatagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 36207394  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||||||||||| |||||||| ||||| | ||||| ||||||||||| ||||||||||||||    
T  36207395 atcaacggatttgttgtgtcggatatgagaaaatcatcaggaatttctaccttcaattcaccattctcat 36207464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 2329149 - 2329415
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2329149 ggacatcagaattttcacccgatcgacaaagagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 2329248  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
     ||||||||||||||||||||||||||||||||||||||       || || ||||||||||||||||||||||||||||||||   |||||||||||||    
T  2329249 gactgaatcaagcgttggtgcgagtattcccctttcttgaaaaaatagtggatcaccaaggttatcattcaaatcgggatacac---gtctataagtgac 2329345  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||| |||||||||||    
T  2329346 atcaacggatttgttgtgtccgatatgagaaaatcttcaggaatttctaccttcattttaccattctcat 2329415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 16042005 - 16042274
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||||    
T  16042005 ggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacttggaatcagcgacatcataaattcgttaacatgctc 16042104  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||| || |||||||||||||||||| || ||||||||||||||||||||| |||    
T  16042105 aactgaatcaagcgttggtgcgagtattcccctttcttggcaaaatagctgggcaccaaggttatcattcagattgggatacacaaagtctataagcgac 16042204  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  16042205 atcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcaccattctcat 16042274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 14 - 267
Target Start/End: Original strand, 18148675 - 18148935
Alignment:
Q  14 agaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaa 113  Q
    |||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18148675 agaattttcatccgatcgacaaacagaataagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaaatgaa 18148774  T
Q  114 tcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacg 206  Q
    ||||||||||||||||||||||||||||||||       |||||||||||||||||||||||||||| | ||||||||||||| |||||||||||||||     
T  18148775 tcaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaggttatcattcaaattgagatacacaaagtcgataagtgacatcaaca 18148874  T
Q  207 gatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctc 267  Q
    |||||||||||||||||||||| ||||||| |  || ||||||||||||||||||||||||    
T  18148875 gatttgttgtgtccgatatgagaaaatcttcataaatttctaccttcatttcaccattctc 18148935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 12 - 264
Target Start/End: Complemental strand, 37390386 - 37390127
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 111  Q
    ||||||||||||||||||| | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  37390386 tcagaattttcacccgatctaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctcaactg 37390287  T
Q  112 aatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 204  Q
    ||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  37390286 aatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgacatcaa 37390187  T
Q  205 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    ||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||    
T  37390186 cggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 37390127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 6311234 - 6310969
Alignment:
Q  7 ggacctcagaattttcacccgatcg-acaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgct 105  Q
    |||| |||||||||||||||||||  | ||| ||||||| || ||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||    
T  6311234 ggacatcagaattttcacccgatctcaaaaatagaatcagaggttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgct 6311135  T
Q  106 caactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtga 198  Q
    ||||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  6311134 caactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtga 6311035  T
Q  199 catcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    ||||||||||||||||||||| ||||| ||| |||||| ||||| |||||||||||||||||||||    
T  6311034 catcaacggatttgttgtgtctgatatcagcgaatcttcaggaatttctaccttcatttcaccatt 6310969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 48775574 - 48775305
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||| ||||  |||||||||||||| |||||| ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||    
T  48775574 ggacatcagactttttgcccgatcgacaaactgaatcagagcttaaatactctttctcttcacctggaatcatttacatcatatattcgttaacatgctc 48775475  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    ||| ||||||||||||||||||||||||||| ||||||       |||| ||||||||| |||||||||| |||||||||| ||||||| ||| ||||||    
T  48775474 aaccgaatcaagcgttggtgcgagtattcccttttcttggaaaaagagcaggtcaccaatgttatcattctaatcgggatatacaaagtgtattagtgac 48775375  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    ||||| | |||||||||||| ||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  48775374 atcaaagaatttgttgtgtcggatatgagcaaatcttcgggaatttctaccttcatttcaccattctcat 48775305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 18 - 197
Target Start/End: Complemental strand, 48238705 - 48238519
Alignment:
Q  18 ttttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaatcaa 117  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  48238705 ttttcacccgatcgacaaacagaatcagagcttaaatactctttctcttcgcctggaatcagcgacatcatatattcgttaacatgctcaactgaatcaa 48238606  T
Q  118 gcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtg 197  Q
    ||||||||||||||||||| ||||||||       || ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  48238605 gcgttggtgcgagtattcctctttcttggaaaaatagagggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtg 48238519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 52500649 - 52500787
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  52500649 ggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttc 52500748  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg 145  Q
    |||||||||||||||||||||||||||||||||||||||    
T  52500749 aactgaatcaagcgttggtgcgagtattcccctttcttg 52500787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 149 - 287
Target Start/End: Original strand, 48233507 - 48233645
Alignment:
Q  149 gggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacggatttgttgtgtccgatatgagcaaatctttaggaacttcta 248  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||| ||||| |||||    
T  48233507 gggtcgccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcagcggatttgttgtgttcgatatgagtaaatcttcaggaatttcta 48233606  T
Q  249 ccttcatttcaccattctcatatgacgcgtctttgtcgt 287  Q
    |||||||||| |||||||||| ||| ||||| |||||||    
T  48233607 ccttcatttccccattctcatctgaagcgtcgttgtcgt 48233645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 12 - 269
Target Start/End: Original strand, 18991 - 19255
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 111  Q
    ||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18991 tcagaattttcactcgatcgacaaacagaatcagagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 19090  T
Q  112 aatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 204  Q
    |||||||||||||||||||||||||||||| |||       |||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  19091 aatcaagcgttggtgcgagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtgacatcaa 19190  T
Q  205 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |  ||||||||||||||||||||||||||||| || || |||||||||||||||| |||||||||    
T  19191 catatttgttgtgtccgatatgagcaaatcttcagaaatttctaccttcatttcatcattctcat 19255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 192; Significance: 1e-104; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 21113983 - 21113714
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  21113983 ggacatcagaattttcacccgagcgacaaacagaatcagagtttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgttc 21113884  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    ||||||||||||||||||||| ||||||||||||| |||       |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21113883 aactgaatcaagcgttggtgcaagtattccccttttttggaaaaatagcgggtcaccaaggttatcattcaaatcaagatacacaaagtctataagtgac 21113784  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||| ||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  21113783 atcaacagatttgttgtgtccgatataagcaaatcttcaggaatttctaccttcatttcaccattctcat 21113714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 25218804 - 25218540
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  25218804 ggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 25218705  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  25218704 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgac 25218605  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||| ||||| |||||||||| ||||| |||||||||||||||||||||    
T  25218604 atcaacggatttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 25218540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 30307157 - 30307421
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| | ||| ||||||  |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  30307157 ggacatcagaattttcacccgatctaaaaatagaatcggagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 30307256  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||  |||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  30307257 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcgttcagatcgggatacacaaagtctataagtgac 30307356  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||||||||| |||||||||| ||||| |||||| ||||||||||||||    
T  30307357 atcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctacattcatttcaccatt 30307421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 171; E-Value: 7e-92
Query Start/End: Original strand, 7 - 264
Target Start/End: Original strand, 7821818 - 7822082
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| | ||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||||    
T  7821818 ggacatcagaattttcacccgatctaaaaatagaatcagagcttaaatactctttctcttcacctgaaatcagcgacatcataaattcgttaacatgctc 7821917  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  7821918 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcggaatacacaaagtctataagtgac 7822017  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||||||||||||    
T  7822018 atcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 7822082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 15 - 233
Target Start/End: Complemental strand, 31978758 - 31978533
Alignment:
Q  15 gaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactgaat 114  Q
    |||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||||||||||    
T  31978758 gaattttcccccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgctcaactgaat 31978659  T
Q  115 caagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaacgg 207  Q
    ||||||||| |||||||||||||||||||||       ||| ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||| |    
T  31978658 caagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtgacatcaacag 31978559  T
Q  208 atttgttgtgtccgatatgagcaaat 233  Q
    |||||||||| ||||||| |||||||    
T  31978558 atttgttgtgcccgatatcagcaaat 31978533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 25209271 - 25209022
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||| ||||||| | ||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  25209271 ggacatcagaattttcgcccgatctaaaaatagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaattcgttaacatgctc 25209172  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    |||||||||||||||||||||||||||||||||||||||       ||  |||||||||||||||||||               ||||||||||||||||    
T  25209171 aactgaatcaagcgttggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcatt---------------aaagtctataagtgac 25209087  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||| || || |||||||||| ||||| |||||||||||||||||||||    
T  25209086 atcaacggatttgttgtgtctgacatcagcaaatcttcaggaatttctaccttcatttcaccatt 25209022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073 (Bit Score: 184; Significance: 1e-99; HSPs: 2)
Name: scaffold0073
Description:

Target: scaffold0073; HSP #1
Raw Score: 184; E-Value: 1e-99
Query Start/End: Original strand, 7 - 269
Target Start/End: Original strand, 31913 - 32181
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  31913 ggacatcagaattttcacccgatctacaaacagaatcagagtttaaatactctttctcttcacctggaatcagcaacatcataaattcgttaacatgctc 32012  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    ||||||||||||||||||||| ||||| |||||||||||       ||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  32013 aactgaatcaagcgttggtgcaagtat-cccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtctataagtgac 32111  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||||||    
T  32112 atcaacggatttgttgtgtccgatatcagcaaatcttcaggaatttctaccttcatttcaccattctcat 32181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0073; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 7 - 233
Target Start/End: Original strand, 19437 - 19670
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| ||| ||| ||||||||    
T  19437 ggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctggaatcagcgacatcataaatttgttgacatgctc 19536  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    ||||||||||||||||| |||||||||||||||||||||       ||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  19537 aactgaatcaagcgttgatgcgagtattcccctttcttggaaaaatagctggtcaccaaggttatcattcagatcgggatacacaaagtttataagtgac 19636  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaat 233  Q
    |||||| ||||||||||||||||||| |||||||    
T  19637 atcaacagatttgttgtgtccgatatcagcaaat 19670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 175; Significance: 3e-94; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 321575 - 321311
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| || |||||| ||||||||||||||||    
T  321575 ggacatcagaattttcacccgatctacaaacagaatcagagcttaaatactctttctcttcacctgaaatcagcgatatcataaattcgttaacatgctc 321476  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    ||||||||||||| |||||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  321475 aactgaatcaagcattggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacaaaaagtctataagtgac 321376  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    ||||||||||||||| |||||||||| |||||||||| ||||| |||||||||||||||||||||    
T  321375 atcaacggatttgttttgtccgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 321311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0550 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: scaffold0550
Description:

Target: scaffold0550; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 7 - 269
Target Start/End: Complemental strand, 811 - 542
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||||||| ||| ||||||||||||| || ||||||||||||||| ||||||||||||||| ||||||||| |||| |||||||||||    
T  811 ggacatcagaattttcacccaatctacaaacagaatcagaggttaaatactctttcttttcacctggaatcagcgacatcataaattcattaacatgctc 712  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    ||||||||||||||||||||||||||||||||||| |||       ||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  711 aactgaatcaagcgttggtgcgagtattcccctttattggaaaaatagctggtcaccaaggttatcatttagatcgggatacacaaagtttataagtgac 612  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||||| ||||||||||| ||||| |||||||||| ||||| |||||||||||||||| |||||||||    
T  611 atcaacgggtttgttgtgtctgatatcagcaaatcttcaggaatttctaccttcatttcatcattctcat 542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 12 - 269
Target Start/End: Original strand, 182796 - 183060
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 111  Q
    ||||| ||||| |||||||||||||| |||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| |    
T  182796 tcagatttttcgcccgatcgacaaactgaatcagagcttaaatactctttctcttcacttggaatcactgacatcatatattcgttaacatgctcaaccg 182895  T
Q  112 aatcaagcgttggtgcgagtattcccctttctt-------gagcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatcaa 204  Q
    |||||||||||||||||||||||||| ||||||       ||| |||||||||| | ||||||||||||||||||| ||||||||||| |||||||||||    
T  182896 aatcaagcgttggtgcgagtattcccttttcttggaaaaagagtgggtcaccaatgatatcattcaaatcgggatatacaaagtctattagtgacatcaa 182995  T
Q  205 cggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    || ||||||||| || ||||||||||||||||  |||| ||||||||||||||||||||||||||    
T  182996 cgaatttgttgtatcggatatgagcaaatcttcgggaatttctaccttcatttcaccattctcat 183060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 12 - 287
Target Start/End: Original strand, 165515 - 165798
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatac-tctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaact 110  Q
    ||||| ||||| |||||||||||||| |||||| |||||||| |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||     
T  165515 tcagacttttcgcccgatcgacaaactgaatcagagcttaaaaaaatctttctcttcacctggaatcactgacatcatatattcgttaacatgctcaacc 165614  T
Q  111 gaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgacatca 203  Q
    ||||||||||||||||||||||||||| |||||||       || |||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||||    
T  165615 gaatcaagcgttggtgcgagtattcccttttcttggaaaaatagtgggtcaccaatgttatcatttaaatcgggatatacaaagtctattagtgacatca 165714  T
Q  204 acggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcatatgacgcgtctttgtcgt 287  Q
    ||| ||||||||| || |||||||| |||||||  |||| |||  |||||||||||||||||||||  || ||||| |||||||    
T  165715 acgaatttgttgtatcggatatgagtaaatcttcgggaatttcccccttcatttcaccattctcattcgaagcgtcgttgtcgt 165798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 7 - 264
Target Start/End: Complemental strand, 49175 - 48911
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| |||||||||||||| |||| | ||| ||||||| || ||||||||||||||||||||||| ||||||| ||||||||| ||||||||||||||||    
T  49175 ggacatcagaattttcacctgatctaaaaatagaatcagaggttaaatactctttctcttcacctagaatcagcgacatcataaattcgttaacatgctc 49076  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
    || |||||||||||| |||||||||||||||||||||||       ||  ||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  49075 aattgaatcaagcgtgggtgcgagtattcccctttcttggaaaaatagttggtcaccaaggttatcattcagatcgggatacacagagtctataagtgac 48976  T
Q  200 atcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccatt 264  Q
    |||||||||||||||||||  ||||| |||||||||| ||||| |||||||||||||||||||||    
T  48975 atcaacggatttgttgtgtttgatatcagcaaatcttcaggaatttctaccttcatttcaccatt 48911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 7 - 225
Target Start/End: Original strand, 16664 - 16889
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||||||||||| | |||| || ||||||||||| |||||||| ||||||||||||||||| |||||||||| ||||||||| ||||||||| |||    
T  16664 ggacatcagaattttcgctcgattgaaaaacagaatcatagcttaaaaactctttctcttcacctagaatcagtgaaatcatatatgcgttaacatactc 16763  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg-------agcgggtcaccaaggttatcattcaaatcgggatacacaaagtctataagtgac 199  Q
     ||| ||| ||||||||||||||||||||||||||||||       ||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16764 cactaaattaagcgttggtgcgagtattcccctttcttggaaaaatagcgggtcaccaaagttatcattcaaatcgggatacacaaagtctataagtgac 16863  T
Q  200 atcaacggatttgttgtgtccgatat 225  Q
    ||||||||||||||||||||||||||    
T  16864 atcaacggatttgttgtgtccgatat 16889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 107; Significance: 1e-53; HSPs: 2)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 28873 - 28735
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctc 106  Q
    |||| ||| ||||||||||| | ||||||||||||||| || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||    
T  28873 ggacatcaaaattttcacccaagcgacaaacagaatcagagtttaaatactttttctcttcacctggaatcagtgacatcatatattcgttaacatgttc 28774  T
Q  107 aactgaatcaagcgttggtgcgagtattcccctttcttg 145  Q
    |||||||||||||||||||||||||||||||||||||||    
T  28773 aactgaatcaagcgttggtgcgagtattcccctttcttg 28735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 231 - 269
Target Start/End: Complemental strand, 28727 - 28689
Alignment:
Q  231 aatctttaggaacttctaccttcatttcaccattctcat 269  Q
    |||||| ||||| ||||||||||||||||||||||||||    
T  28727 aatcttcaggaatttctaccttcatttcaccattctcat 28689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 136 - 24
Alignment:
Q  12 tcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtgacatcatatattcgttaacatgctcaactg 111  Q
    ||||||||||||||||||||||| ||| ||||| |||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||||||||||||    
T  136 tcagaattttcacccgatcgacatacaaaatcagagcttaaatactctttctcgccacctgaaatcagtgacatcgtatattcgttaacatgctcaactg 37  T
Q  112 aatcaagcgttgg 124  Q
    |||||||| ||||    
T  36 aatcaagccttgg 24  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 269
Target Start/End: Original strand, 39937 - 40005
Alignment:
Q  201 tcaacggatttgttgtgtccgatatgagcaaatctttaggaacttctaccttcatttcaccattctcat 269  Q
    ||||||||||||||||||||||||| |||||||||| | ||| ||||||||| ||||||||||||||||    
T  39937 tcaacggatttgttgtgtccgatatcagcaaatcttcaagaatttctacctttatttcaccattctcat 40005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1424 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold1424
Description:

Target: scaffold1424; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 82
Target Start/End: Original strand, 1628 - 1703
Alignment:
Q  7 ggacctcagaattttcacccgatcgacaaacagaatcaaagcttaaatactctttctcttcacctggaatcagtga 82  Q
    |||| ||| ||||||||||||||||| ||||| ||||| || |||||||| |||||||||||||||||||||||||    
T  1628 ggacatcaaaattttcacccgatcgataaacataatcagagtttaaatacgctttctcttcacctggaatcagtga 1703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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