View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6726_high_7 (Length: 332)
Name: NF6726_high_7
Description: NF6726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6726_high_7 |
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Alignment Details
Target: chr1 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 5 - 314
Target Start/End: Original strand, 7812440 - 7812749
Alignment:
| Q |
5 |
atgagattagtgccccacaaccaacagctctaaagagcaaagattcacaacaaaaataattcatcaaataaatttaattcaacgtatatatacttttcaa |
104 |
Q |
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| T |
7812440 |
atgagattagtgccccacaaccaacagctctaaagagcaaagattcacaacaaaaataattcatcaaataaatttaattcaacgtatatatacttttcaa |
7812539 |
T |
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| Q |
105 |
aattatatttactgtaatattaaatagcttcatatttccaatctataaaaatttgatgtatggtcgttaagataaaaatatgacaatatttaactattga |
204 |
Q |
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| T |
7812540 |
aattatatttactgtaatattaaatagctacatatttccaatctatagaaatttgatgtatggtcgttaagataaaaatatgacaatatttaactattga |
7812639 |
T |
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| Q |
205 |
atttgtatagttatttaatatctataaaaagttattataagtcgaataattcttacaaaagttactcctaaagtaatatttatatatctatgtctgagag |
304 |
Q |
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| T |
7812640 |
atttgtatagttatttaatatctataaaaagttattataagtcgaataattcttacaaaagttactcctaaagtaatatttatatatctatgtctgagag |
7812739 |
T |
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| Q |
305 |
cgcccatagt |
314 |
Q |
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| T |
7812740 |
cgcccatagt |
7812749 |
T |
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