View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6726_high_9 (Length: 294)

Name: NF6726_high_9
Description: NF6726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6726_high_9
NF6726_high_9
[»] chr2 (35 HSPs)
chr2 (20-124)||(6855854-6855956)
chr2 (119-212)||(6857477-6857570)
chr2 (207-280)||(7442887-7442960)
chr2 (209-280)||(14372269-14372340)
chr2 (213-280)||(44283281-44283348)
chr2 (210-276)||(18718435-18718501)
chr2 (210-280)||(23671568-23671638)
chr2 (210-276)||(41172756-41172822)
chr2 (211-280)||(40425249-40425318)
chr2 (208-280)||(3987229-3987301)
chr2 (211-277)||(14707535-14707601)
chr2 (211-280)||(20517610-20517679)
chr2 (217-278)||(36198957-36199018)
chr2 (211-280)||(42038715-42038784)
chr2 (208-280)||(30708920-30708992)
chr2 (210-280)||(9877082-9877152)
chr2 (210-279)||(34827105-34827174)
chr2 (211-279)||(27559768-27559836)
chr2 (211-280)||(32775903-32775972)
chr2 (211-279)||(44330577-44330645)
chr2 (209-279)||(4045231-4045301)
chr2 (207-277)||(39418016-39418086)
chr2 (211-279)||(41463517-41463585)
chr2 (210-264)||(13399104-13399158)
chr2 (211-280)||(4083399-4083468)
chr2 (208-276)||(38963715-38963783)
chr2 (209-276)||(332470-332537)
chr2 (245-276)||(16941845-16941876)
chr2 (245-276)||(17012510-17012541)
chr2 (206-277)||(24282955-24283026)
chr2 (217-280)||(40598321-40598384)
chr2 (145-199)||(6862429-6862482)
chr2 (211-243)||(3987461-3987493)
chr2 (211-243)||(20917729-20917761)
chr2 (211-243)||(27559575-27559607)
[»] chr3 (34 HSPs)
chr3 (206-280)||(37833092-37833166)
chr3 (210-280)||(18659244-18659314)
chr3 (211-280)||(7459820-7459889)
chr3 (211-280)||(8559005-8559074)
chr3 (210-280)||(52668485-52668555)
chr3 (208-280)||(29728095-29728167)
chr3 (209-280)||(1327504-1327575)
chr3 (210-280)||(32951135-32951205)
chr3 (206-280)||(38833855-38833929)
chr3 (210-279)||(54840127-54840196)
chr3 (209-280)||(10571142-10571213)
chr3 (210-280)||(21907188-21907258)
chr3 (211-280)||(34827445-34827514)
chr3 (210-279)||(45167492-45167561)
chr3 (211-276)||(53066566-53066631)
chr3 (225-280)||(43138043-43138098)
chr3 (209-276)||(48706844-48706911)
chr3 (210-280)||(4238493-4238563)
chr3 (211-280)||(51062582-51062651)
chr3 (208-280)||(47638247-47638319)
chr3 (210-280)||(17053056-17053126)
chr3 (211-272)||(46483748-46483809)
chr3 (210-262)||(10435329-10435381)
chr3 (220-280)||(38492243-38492303)
chr3 (205-276)||(54673974-54674045)
chr3 (210-276)||(32285175-32285241)
chr3 (211-280)||(3547420-3547489)
chr3 (208-277)||(36665213-36665282)
chr3 (211-262)||(27849146-27849197)
chr3 (208-243)||(43137848-43137883)
chr3 (210-243)||(1327310-1327343)
chr3 (210-243)||(18659051-18659084)
chr3 (228-276)||(15503219-15503267)
chr3 (211-243)||(21906996-21907028)
[»] chr4 (44 HSPs)
chr4 (208-280)||(3442341-3442413)
chr4 (210-280)||(3901138-3901208)
chr4 (210-280)||(5735463-5735533)
chr4 (210-280)||(47579478-47579548)
chr4 (209-280)||(46803824-46803895)
chr4 (210-280)||(26205703-26205773)
chr4 (206-280)||(49768637-49768711)
chr4 (211-280)||(20678588-20678657)
chr4 (211-280)||(21858919-21858988)
chr4 (211-280)||(21914782-21914851)
chr4 (211-276)||(28152187-28152252)
chr4 (209-280)||(28166466-28166537)
chr4 (211-280)||(7738819-7738888)
chr4 (211-280)||(37688033-37688102)
chr4 (210-280)||(4264326-4264396)
chr4 (210-276)||(45198339-45198405)
chr4 (206-277)||(1377226-1377297)
chr4 (209-276)||(18359971-18360038)
chr4 (209-276)||(36602890-36602957)
chr4 (210-280)||(4209551-4209621)
chr4 (211-277)||(19652256-19652322)
chr4 (210-280)||(25644551-25644621)
chr4 (210-280)||(55190565-55190635)
chr4 (211-280)||(3443387-3443456)
chr4 (216-280)||(5123162-5123226)
chr4 (211-279)||(5744083-5744151)
chr4 (209-276)||(39260130-39260197)
chr4 (206-280)||(6494782-6494856)
chr4 (210-280)||(6922939-6923009)
chr4 (211-280)||(46212350-46212419)
chr4 (214-280)||(19525717-19525783)
chr4 (211-276)||(23603647-23603712)
chr4 (211-276)||(47278277-47278342)
chr4 (211-280)||(19170539-19170608)
chr4 (211-280)||(39786357-39786426)
chr4 (216-280)||(19633854-19633918)
chr4 (210-278)||(40250771-40250839)
chr4 (208-243)||(26205933-26205968)
chr4 (210-280)||(51736953-51737023)
chr4 (210-243)||(5735270-5735303)
chr4 (210-243)||(28166273-28166306)
chr4 (210-243)||(45198569-45198602)
chr4 (206-243)||(46212579-46212616)
chr4 (218-266)||(42187007-42187055)
[»] chr5 (25 HSPs)
chr5 (209-280)||(35447995-35448066)
chr5 (209-280)||(42148499-42148570)
chr5 (211-280)||(38698155-38698224)
chr5 (209-280)||(23988769-23988840)
chr5 (208-280)||(5212919-5212991)
chr5 (210-280)||(4299832-4299902)
chr5 (210-280)||(22613708-22613778)
chr5 (210-280)||(32002013-32002083)
chr5 (211-280)||(39894973-39895042)
chr5 (210-280)||(970330-970400)
chr5 (210-280)||(16048277-16048347)
chr5 (210-279)||(32334637-32334706)
chr5 (216-280)||(37516337-37516401)
chr5 (214-280)||(39036602-39036668)
chr5 (210-280)||(39405956-39406026)
chr5 (210-280)||(43067413-43067483)
chr5 (211-280)||(5364616-5364685)
chr5 (211-280)||(14475230-14475299)
chr5 (211-280)||(35290478-35290547)
chr5 (211-280)||(37843575-37843644)
chr5 (210-277)||(29627463-29627530)
chr5 (211-280)||(4924838-4924907)
chr5 (211-277)||(40512680-40512746)
chr5 (211-276)||(43517060-43517125)
chr5 (211-243)||(42148307-42148339)
[»] chr8 (28 HSPs)
chr8 (211-280)||(23249044-23249113)
chr8 (211-280)||(30290116-30290185)
chr8 (209-280)||(29791134-29791205)
chr8 (210-280)||(2805475-2805545)
chr8 (209-280)||(43066318-43066389)
chr8 (209-280)||(45082004-45082075)
chr8 (206-280)||(30380722-30380796)
chr8 (211-280)||(14522571-14522640)
chr8 (208-280)||(8350877-8350949)
chr8 (210-280)||(18809468-18809538)
chr8 (211-280)||(3293101-3293170)
chr8 (211-280)||(2986517-2986586)
chr8 (219-276)||(39361321-39361378)
chr8 (210-276)||(31127804-31127870)
chr8 (213-279)||(38845800-38845866)
chr8 (211-276)||(6471041-6471106)
chr8 (211-280)||(12893720-12893789)
chr8 (211-279)||(37710092-37710160)
chr8 (214-280)||(40013843-40013909)
chr8 (211-280)||(13138132-13138201)
chr8 (211-280)||(1580768-1580834)
chr8 (210-280)||(10658169-10658239)
chr8 (209-279)||(38739850-38739920)
chr8 (207-243)||(40013647-40013683)
chr8 (228-280)||(45253938-45253990)
chr8 (209-243)||(3293331-3293365)
chr8 (206-272)||(3383608-3383674)
chr8 (221-277)||(6470624-6470680)
[»] chr7 (25 HSPs)
chr7 (211-280)||(36819888-36819957)
chr7 (211-280)||(47081172-47081241)
chr7 (210-280)||(2400477-2400547)
chr7 (210-276)||(37950944-37951010)
chr7 (211-280)||(28185411-28185480)
chr7 (211-280)||(31466358-31466427)
chr7 (211-280)||(36859208-36859277)
chr7 (211-280)||(42086638-42086707)
chr7 (211-280)||(42834292-42834361)
chr7 (210-280)||(10464114-10464184)
chr7 (210-280)||(48531514-48531584)
chr7 (211-279)||(4612087-4612155)
chr7 (208-280)||(19072961-19073033)
chr7 (210-280)||(37231562-37231632)
chr7 (210-280)||(47713501-47713571)
chr7 (211-280)||(23473969-23474038)
chr7 (211-276)||(32618942-32619007)
chr7 (210-277)||(31110820-31110887)
chr7 (206-280)||(34478003-34478077)
chr7 (210-277)||(35500746-35500813)
chr7 (211-277)||(36905721-36905787)
chr7 (211-280)||(47538115-47538184)
chr7 (214-280)||(21392210-21392276)
chr7 (211-264)||(24151581-24151634)
chr7 (240-280)||(44479750-44479790)
[»] chr6 (18 HSPs)
chr6 (211-280)||(20662059-20662128)
chr6 (207-280)||(24150933-24151006)
chr6 (206-280)||(8796241-8796315)
chr6 (211-280)||(18992095-18992164)
chr6 (206-280)||(7097868-7097942)
chr6 (210-280)||(25163356-25163426)
chr6 (206-280)||(30237359-30237433)
chr6 (206-279)||(31855011-31855084)
chr6 (210-280)||(16696015-16696085)
chr6 (211-280)||(11114757-11114826)
chr6 (211-280)||(25435603-25435672)
chr6 (211-279)||(22020469-22020537)
chr6 (209-280)||(33121734-33121805)
chr6 (210-280)||(643430-643500)
chr6 (211-251)||(29979024-29979064)
chr6 (209-280)||(19068769-19068840)
chr6 (206-243)||(25435407-25435444)
chr6 (211-243)||(33121542-33121574)
[»] chr1 (30 HSPs)
chr1 (211-280)||(50876556-50876625)
chr1 (208-280)||(52379181-52379253)
chr1 (210-280)||(25531970-25532040)
chr1 (210-280)||(42708692-42708762)
chr1 (210-280)||(48264810-48264880)
chr1 (211-280)||(39354264-39354333)
chr1 (208-280)||(37281284-37281356)
chr1 (213-280)||(48219644-48219711)
chr1 (210-280)||(3898570-3898640)
chr1 (210-280)||(16265225-16265295)
chr1 (210-280)||(16266354-16266424)
chr1 (210-280)||(26441826-26441896)
chr1 (210-280)||(43680262-43680332)
chr1 (211-276)||(29162039-29162104)
chr1 (211-280)||(30529050-30529119)
chr1 (210-279)||(32988348-32988417)
chr1 (211-280)||(38458922-38458991)
chr1 (211-279)||(1849894-1849962)
chr1 (210-280)||(24982543-24982613)
chr1 (211-280)||(50539452-50539521)
chr1 (211-279)||(49805252-49805320)
chr1 (209-276)||(45234847-45234914)
chr1 (210-280)||(4605191-4605261)
chr1 (208-280)||(23569671-23569743)
chr1 (209-265)||(32565945-32566001)
chr1 (208-243)||(23569903-23569938)
chr1 (209-243)||(3529174-3529208)
chr1 (209-243)||(50539258-50539292)
chr1 (205-243)||(52378983-52379021)
chr1 (212-276)||(21034530-21034594)
[»] scaffold0027 (2 HSPs)
scaffold0027 (206-280)||(117513-117587)
scaffold0027 (211-243)||(117321-117353)
[»] scaffold0007 (1 HSPs)
scaffold0007 (209-280)||(15214-15285)
[»] scaffold0092 (1 HSPs)
scaffold0092 (218-280)||(44115-44177)
[»] scaffold0459 (1 HSPs)
scaffold0459 (219-280)||(12944-13005)
[»] scaffold0366 (2 HSPs)
scaffold0366 (219-280)||(10585-10646)
scaffold0366 (219-280)||(14251-14312)
[»] scaffold0051 (1 HSPs)
scaffold0051 (211-280)||(41217-41286)
[»] scaffold0340 (1 HSPs)
scaffold0340 (210-277)||(14533-14600)
[»] scaffold0604 (1 HSPs)
scaffold0604 (210-263)||(1317-1370)


Alignment Details
Target: chr2 (Bit Score: 90; Significance: 2e-43; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 20 - 124
Target Start/End: Original strand, 6855854 - 6855956
Alignment:
Q  20 ccaatagtggtgtgttgctggtaggccaaacagggttttgattttgggttgaaatatatgcttatattgtttattggggacatgatgaagtttattctta 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||    
T  6855854 ccaatagtggtgtgttgctggtaggccaaacagggttttgattttgggttgaaatatatgct--tattgtttattggggacataatgaagtttattctta 6855951  T
Q  120 gtgat 124  Q
    |||||    
T  6855952 gtgat 6855956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 6857477 - 6857570
Alignment:
Q  119 agtgatgtttattgcaaaatacatcctaggatatgccgacggttggtatcacattagaaaacagattagtgactgtaaagtgatggtaataata 212  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  6857477 agtgatgtttattgcaaaatacatcctaggatacgccgacggttggtatcacattagaaaacagattagtgacggtaaagtgatggtgataata 6857570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 207 - 280
Target Start/End: Original strand, 7442887 - 7442960
Alignment:
Q  207 ataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||    
T  7442887 ataatactccctccgtcccttaataaatgatctagttgacaatatacattattgacttgacatactttgaccat 7442960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 14372340 - 14372269
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||    
T  14372340 aatactccctccgtcccttaataaatgacctaattgacaatatgcattattgacttgatatactttgaccat 14372269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 44283281 - 44283348
Alignment:
Q  213 ctccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  44283281 ctccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 44283348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 18718501 - 18718435
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  18718501 atactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttga 18718435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 23671638 - 23671568
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  23671638 atactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttggtatactttgaccat 23671568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 41172756 - 41172822
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  41172756 atactccccccgtcccttaataaatgatctagttgacaatatgcattattgacttgatatactttga 41172822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 40425249 - 40425318
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  40425249 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgatttgatatactttgaccat 40425318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 3987229 - 3987301
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||||  ||||| ||||||||||||||| ||||||||||||||||||||    
T  3987229 taatactccctccgtcccttaataaatgacttagttgacaatatgcattattaacttgatatactttgaccat 3987301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 211 - 277
Target Start/End: Original strand, 14707535 - 14707601
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||    
T  14707535 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatgtactttgac 14707601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 20517679 - 20517610
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||| |||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  20517679 tactccctccgttccttaataaatgacttagttgacaatatgcattattgacttgatatactttgaccat 20517610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 217 - 278
Target Start/End: Original strand, 36198957 - 36199018
Alignment:
Q  217 ctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacc 278  Q
    |||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||    
T  36198957 ctccgtcccttaataaatgacctagttgacaatatgcattattgatttgatatactttgacc 36199018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 42038784 - 42038715
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||  |||| ||||||| |||||||||||||| |||||||||||||    
T  42038784 tactccctccgtcccttaataaatgattcagttgacaatatacattattgacttgacatactttgaccat 42038715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 30708992 - 30708920
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||| | ||||||||||||||||||| |||||| ||||||| |||||||||||||||||| |||||||||    
T  30708992 taatacttcatccgtcccttaataaatgacctagttgacaatatacattattgacttgatatattttgaccat 30708920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 9877082 - 9877152
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||| |||| ||| || ||||||| |||||||||||||| |||||||||||||    
T  9877082 atactccctccgtcccttaatagatgacctaattgacaatatacattattgacttgacatactttgaccat 9877152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 34827174 - 34827105
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    ||||||||||||||||||||||||||| | |||| |||||||  ||||||||||||| ||||||||||||    
T  34827174 atactccctccgtcccttaataaatgacccagttgacaatatatattattgacttgacatactttgacca 34827105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 27559836 - 27559768
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||||||||||||||||||||||| | |||| ||||||| |||| ||||||||| ||||||||||||    
T  27559836 tactccctccgtcccttaataaatgacccagttgacaatatacatttttgacttgacatactttgacca 27559768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 32775903 - 32775972
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||| |||| |||| | |||| ||||||| |||||||||||||| |||||||||||||    
T  32775903 tactccctccgtccctcaatagatgacccagttgacaatatacattattgacttgacatactttgaccat 32775972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 44330645 - 44330577
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||||||||||||||| ||||||| | |||| ||||||| |||||||||||||| ||||||| ||||    
T  44330645 tactccctccgtcccttattaaatgacccagttgacaatatacattattgacttgacatactttaacca 44330577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 209 - 279
Target Start/End: Original strand, 4045231 - 4045301
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||||||||||||||||||||||||| | | || ||||||| |||| ||||||||| ||| ||||||||    
T  4045231 aatactccctccgtcccttaataaatgacccatttgacaatatacattgttgacttgacatattttgacca 4045301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 207 - 277
Target Start/End: Original strand, 39418016 - 39418086
Alignment:
Q  207 ataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    ||||||||||||||||| ||||||  ||||  ||||| ||||||| |||||||||||||| ||||||||||    
T  39418016 ataatactccctccgtctcttaatggatgacttagttgacaatatacattattgacttgacatactttgac 39418086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 41463517 - 41463585
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||| |||||| || |||||||||||||||| ||||||| ||||||||| |||| ||||||| ||||    
T  41463517 tactccttccgtctctcaataaatgatctagttgacaatatacattattgatttgacatactttcacca 41463585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 264
Target Start/End: Original strand, 13399104 - 13399158
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgactt 264  Q
    |||||||| |||||||| |||| ||||||||||| ||||||| ||||||||||||    
T  13399104 atactccccccgtccctcaatagatgatctagttgacaatatacattattgactt 13399158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 4083468 - 4083399
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||| |||||| ||||  | |||||||| || ||||||| |||||||||||||| |||||||||||||    
T  4083468 tactccatccgtctcttagaagatgatctatttgacaatatacattattgacttgacatactttgaccat 4083399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 208 - 276
Target Start/End: Complemental strand, 38963783 - 38963715
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||||| |||| |||||||  || |||||||  |||||||||||||  ||||||||    
T  38963783 taatactccctccgtccctaaatagatgatctgcttgacaatatatattattgacttgacgtactttga 38963715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 332537 - 332470
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||| | ||||||||| || ||||| || ||||||| |||||||||||| | |||||||||    
T  332537 aatactccctctgccccttaatagataatctatttgacaatatacattattgacttaacatactttga 332470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 276
Target Start/End: Original strand, 16941845 - 16941876
Alignment:
Q  245 acaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||||||||||||||||||    
T  16941845 acaatatgcattattgacttgatatactttga 16941876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 245 - 276
Target Start/End: Original strand, 17012510 - 17012541
Alignment:
Q  245 acaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||||||||||||||||||    
T  17012510 acaatatgcattattgacttgatatactttga 17012541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 206 - 277
Target Start/End: Original strand, 24282955 - 24283026
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    |||| |||||| ||||||||| |||| ||||||||||| |||||||  |||||||| |||| ||| ||||||    
T  24282955 aatactactccttccgtccctcaatagatgatctagttgacaatatatattattgatttgacatattttgac 24283026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 280
Target Start/End: Complemental strand, 40598384 - 40598321
Alignment:
Q  217 ctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| ||||| ||||||||| |||||| ||||||| ||||||| | || |||||||||||||||    
T  40598384 ctccctccctcaataaatgacctagttgacaatatacattattaatttaatatactttgaccat 40598321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 145 - 199
Target Start/End: Original strand, 6862429 - 6862482
Alignment:
Q  145 taggatatgccgacggttggtatcacattagaaaacagattagtgactgtaaagt 199  Q
    ||||||||||||||| ||||||| |||||| |||||||| | |||||||||||||    
T  6862429 taggatatgccgacgcttggtattacatta-aaaacagacttgtgactgtaaagt 6862482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Complemental strand, 3987493 - 3987461
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||| ||||||||||||||||    
T  3987493 tactccctccgtccctaaataaatgatctagtt 3987461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 20917729 - 20917761
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||||||||||||| ||||||    
T  20917729 tactccctccgtcccttaataaatgacctagtt 20917761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 27559575 - 27559607
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||| ||||||||||||||||    
T  27559575 tactccctccgtccctaaataaatgatctagtt 27559607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 3e-32; HSPs: 34)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 37833166 - 37833092
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  37833166 aataatactccctccgtcccttaataaatgacctagttaacaatatgcattattgacttgatatactttgaccat 37833092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 18659314 - 18659244
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  18659314 atactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 18659244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 7459820 - 7459889
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  7459820 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 7459889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 8559005 - 8559074
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  8559005 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 8559074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 52668485 - 52668555
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||    
T  52668485 atactccctccgtcccttaataaatcacctagttgacaatatgcattattgacttgatatactttgaccat 52668555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 29728095 - 29728167
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| |||||||||    
T  29728095 taatactccctccgtcccttaataaatgatctagttgacaatatacattattgacttgagatattttgaccat 29728167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 1327575 - 1327504
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||  ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  1327575 aatactctttccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 1327504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 32951135 - 32951205
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| |||||||||||||||| ||||||| |||||||||||| |||||||||||||||    
T  32951135 atactccctccgtccctcaataaatgatctagttgacaatatacattattgacttaatatactttgaccat 32951205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 38833929 - 38833855
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||||||| | |||| ||||||| |||||||||||||| ||| |||||||||    
T  38833929 aataatactccctccgtcccttaataaatgacccagttgacaatatacattattgacttgacatattttgaccat 38833855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 54840127 - 54840196
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    ||||||||||||||||||||||||||| | |||| ||||||| |||||||||||||| ||||||||||||    
T  54840127 atactccctccgtcccttaataaatgacccagttgacaatatacattattgacttgacatactttgacca 54840196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 10571142 - 10571213
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| | | |||| ||||||| |||||||||||||| |||||||||||||    
T  10571142 aatactccctccgtcccttaataaataacccagttgacaatatacattattgacttgacatactttgaccat 10571213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 21907258 - 21907188
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||   |||| ||||||| |||||||||||||| |||||||||||||    
T  21907258 atactccctccgtcccttaataaatgactcagttgacaatatacattattgacttgacatactttgaccat 21907188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 34827514 - 34827445
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| |||||||  ||||||||||||| ||||||| |||||    
T  34827514 tactccctccgtcccttaataaatgacctagttgacaatatatattattgacttgacatactttcaccat 34827445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 279
Target Start/End: Complemental strand, 45167561 - 45167492
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||||||||||||||||||| |||||| |||| ||||||| |||||||||||||| ||| ||||||||    
T  45167561 atactccctccgtcccttaatatatgatccagttgacaatatacattattgacttgacatattttgacca 45167492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 53066631 - 53066566
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||| |||||||||    
T  53066631 tactccctccgtcccttaatagatgatctagttgacaatatatattattgacttgacatactttga 53066566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 225 - 280
Target Start/End: Complemental strand, 43138098 - 43138043
Alignment:
Q  225 cttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  43138098 cttaataaatgacttagttgacaatatgcattattgacttgatatactttgaccat 43138043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 48706844 - 48706911
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||||||||||||||||||||||||||||| |||| |||||||  ||||||||||||| ||| |||||    
T  48706844 aatactccctccgtcccttaataaatgatccagttgacaatatatattattgacttgacatattttga 48706911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 4238493 - 4238563
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| |||||||||  ||||| ||||||| ||||||| |||| |||||||||||||||    
T  4238493 atactccctccgtccctcaataaatgacttagttgacaatatacattattaacttaatatactttgaccat 4238563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 51062651 - 51062582
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||   |||| | ||||| |||||||||||||| |||||||||||||    
T  51062651 tactccctccgtcccttaataaatgactcagttgataatatacattattgacttgacatactttgaccat 51062582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 47638319 - 47638247
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||| |||||||||||||||||| |||| ||| || ||||||| ||||||||| |||| |||||||||||||    
T  47638319 taatattccctccgtcccttaatagatgacctaattgacaatatacattattgatttgacatactttgaccat 47638247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 17053126 - 17053056
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||| |||||||||| ||||||||| | |||| ||||||| ||||||||| || |||||||||||||||    
T  17053126 atactctctccgtccctcaataaatgacccagttgacaatatacattattgatttaatatactttgaccat 17053056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 272
Target Start/End: Complemental strand, 46483809 - 46483748
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatact 272  Q
    ||||||||| ||||||||||| ||||||||||| ||||||| ||||||||| |||| |||||    
T  46483809 tactccctctgtcccttaatagatgatctagttgacaatatacattattgatttgacatact 46483748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 210 - 262
Target Start/End: Complemental strand, 10435381 - 10435329
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgac 262  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| ||||||||||    
T  10435381 atactccctccgtccctcaataaatgacctagttgacaatatacattattgac 10435329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 220 - 280
Target Start/End: Complemental strand, 38492303 - 38492243
Alignment:
Q  220 cgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| |||||| ||||||| ||||||||| || | |||||||||||||    
T  38492303 cgtcccttaataaatgacctagttgacaatatacattattgatttaacatactttgaccat 38492243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 205 - 276
Target Start/End: Complemental strand, 54674045 - 54673974
Alignment:
Q  205 taataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||||||||||||||||||||| ||||||||||||  || |||||||  |||||||| ||||  ||||||||    
T  54674045 taataatactccctccgtccctaaataaatgatctgtttgacaatatatattattgatttgacgtactttga 54673974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 32285175 - 32285241
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||| ||||| |||||||| |||  |||||| ||||||| |||||||||||||| |||||||||    
T  32285175 atactccatccgttccttaatagatggcctagttgacaatatacattattgacttgacatactttga 32285241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 3547420 - 3547489
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||| ||||||| |||| |||| ||| || ||||||| |||||||||||| | |||||||||||||    
T  3547420 tactcccttcgtccctcaatagatgacctatttgacaatatacattattgacttaacatactttgaccat 3547489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 208 - 277
Target Start/End: Complemental strand, 36665282 - 36665213
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    |||||| ||||||||||||||||| |||| ||| || ||||||| ||||||| |||| | ||||||||||    
T  36665282 taataccccctccgtcccttaatagatgacctatttgacaatatacattattaacttaacatactttgac 36665213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 211 - 262
Target Start/End: Complemental strand, 27849197 - 27849146
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgac 262  Q
    |||||| |||||||||||||| |||| |||||| ||||||| ||||||||||    
T  27849197 tactccttccgtcccttaatagatgacctagttgacaatatacattattgac 27849146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 243
Target Start/End: Original strand, 43137848 - 43137883
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagtt 243  Q
    ||||||||||||||||||| ||||||||||||||||    
T  43137848 taatactccctccgtccctaaataaatgatctagtt 43137883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 1327310 - 1327343
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagtt 243  Q
    ||||||||||||||||| ||||||||||||||||    
T  1327310 atactccctccgtccctaaataaatgatctagtt 1327343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 18659051 - 18659084
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagtt 243  Q
    ||||||||||||||||| ||||||||||||||||    
T  18659051 atactccctccgtccctaaataaatgatctagtt 18659084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 276
Target Start/End: Complemental strand, 15503267 - 15503219
Alignment:
Q  228 aataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||| ||||||||||| | ||||| |||||||||||| |||||||||||    
T  15503267 aatagatgatctagttgataatatacattattgacttaatatactttga 15503219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 21906996 - 21907028
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||| ||||||||||||||||    
T  21906996 tactccctccgtccctcaataaatgatctagtt 21907028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 3442341 - 3442413
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  3442341 taatactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 3442413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 3901138 - 3901208
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3901138 atacttcctccgtcccttaataaatgatctagttgacaatatgcattattgacttgatatactttgaccat 3901208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 5735533 - 5735463
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  5735533 atactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 5735463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 47579548 - 47579478
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  47579548 atactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 47579478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 46803895 - 46803824
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  46803895 aatactccctctgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 46803824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 26205703 - 26205773
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  26205703 atactccctccgtcccttaataaatgacttagttgacaatatgcattattgacttgatatactttgaccat 26205773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 49768711 - 49768637
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||| | ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  49768711 aataatacttcatccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 49768637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 20678588 - 20678657
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  20678588 tacttcctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 20678657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 21858919 - 21858988
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  21858919 tactccatccgtcccttaataaatgatctagttgacaatatgaattattgacttgatatactttgaccat 21858988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 21914782 - 21914851
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||| |||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||    
T  21914782 tactccatccgtcccttaataaatgatctagttgacaatatgaattattgacttgatatactttgaccat 21914851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 28152252 - 28152187
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  28152252 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttga 28152187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 28166537 - 28166466
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  28166537 aatacttccttcgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 28166466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 7738819 - 7738888
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  7738819 tactccctccgtcccttaataaatgacctagttgacaatatacattattgacttgacatactttgaccat 7738888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 37688033 - 37688102
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||||||||||||    
T  37688033 tactccctccgttccttaataaatgatctagttgacaatatgtattattgatttgatatactttgaccat 37688102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 4264396 - 4264326
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||  ||||| ||||||| |||||||||||||| |||||||||||||    
T  4264396 atactccctccgtcccttaataaatgacttagttgacaatatacattattgacttgacatactttgaccat 4264326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 45198339 - 45198405
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||| |||||||||||    
T  45198339 atactccctccgtcccttaataaatgacctagttgacaatatacattattgacttaatatactttga 45198405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 206 - 277
Target Start/End: Complemental strand, 1377297 - 1377226
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    |||| ||||||||| |||||||||||||||||| |||| ||||||| |||||||||||||| ||||||||||    
T  1377297 aatattactccctctgtcccttaataaatgatccagttgacaatatacattattgacttgacatactttgac 1377226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 18359971 - 18360038
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||| |||||||||    
T  18359971 aatactccctccgtcccttaatagatgacctagttgacaatatacattattgacttgacatactttga 18360038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 36602957 - 36602890
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||| |||||||||    
T  36602957 aatactccctccgtcccttaatagatgacctagttgacaatatacattattgacttgacatactttga 36602890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 4209621 - 4209551
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||| |||| |||||| ||||||| ||||||||| |||| |||||||||||||    
T  4209621 atactccctccgtcccttaatagatgacctagttgacaatatacattattgatttgacatactttgaccat 4209551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 211 - 277
Target Start/End: Original strand, 19652256 - 19652322
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    |||| |||||||||||||||| ||||||||||| ||||||| |||||||||||||| ||||||||||    
T  19652256 tacttcctccgtcccttaatagatgatctagttgacaatatacattattgacttgacatactttgac 19652322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 25644621 - 25644551
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||| | ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  25644621 atactccctccgtccttcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 25644551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 55190565 - 55190635
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||| || | |||||| ||||||| |||||||||||||| |||||||||||||    
T  55190565 atactccctccgtcccttaatagataacctagttgacaatatacattattgacttgacatactttgaccat 55190635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 3443387 - 3443456
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||| |||| ||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  3443387 tactctctccctcccttaataaatgacctagttgacaatatacattattgacttgacatactttgaccat 3443456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 5123162 - 5123226
Alignment:
Q  216 cctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||| |||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  5123162 cctccgtcccttaatagatgacctagttgacaatatacattattgacttgacatactttgaccat 5123226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 5744083 - 5744151
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||||||||||||||||||||||| | |||| ||||||| |||| ||||||||| ||||||||||||    
T  5744083 tactccctccgtcccttaataaatgacccagttgacaatatacatttttgacttgacatactttgacca 5744151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 39260130 - 39260197
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||||| |||||||||||||||| |||| |||||| ||||||| |||||||||||||| |||||||||    
T  39260130 aatacttcctccgtcccttaatagatgacctagttgacaatatacattattgacttgacatactttga 39260197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 6494856 - 6494782
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| |||||| ||||||||||||||||||| | |||| ||||||| |||||||||||| | |||||||||||||    
T  6494856 aatactactccttccgtcccttaataaatgacccagttgacaatatacattattgacttaacatactttgaccat 6494782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 6922939 - 6923009
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||| ||| ||||||||| |||||| | ||||| |||||||||||| |||||||||||||||    
T  6922939 atactccctccgttcctcaataaatgacctagttgataatatacattattgacttaatatactttgaccat 6923009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 46212350 - 46212419
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||| |||||||||||||||   |||| ||||||| |||||||||||||| |||||||||||||    
T  46212350 tactccctccatcccttaataaatgactcagttgacaatatacattattgacttgacatactttgaccat 46212419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 280
Target Start/End: Original strand, 19525717 - 19525783
Alignment:
Q  214 tccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||| ||||||||| |||||| ||||||| ||| |||||||| | |||||||||||||    
T  19525717 tccctccgtccctcaataaatgacctagttgacaatatacatcattgacttaacatactttgaccat 19525783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 23603647 - 23603712
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||||||||||| ||| |||| |||| |||||| ||||||| |||||||||||||| |||||||||    
T  23603647 tactccctccgttcctcaatagatgacctagttgacaatatacattattgacttgacatactttga 23603712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 47278277 - 47278342
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||||||||||||| |||| | ||||  || ||||||||||||||||||||||| |||||||||||    
T  47278277 tactccctccgtcctttaagagatgacttatttaacaatatgcattattgacttaatatactttga 47278342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 19170539 - 19170608
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||| ||||||||| ||  || |||||||  |||||||||||||  ||||||||||||    
T  19170539 tactccctccgtccctaaataaatgacctgtttgacaatatatattattgacttgacgtactttgaccat 19170608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 39786357 - 39786426
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||| |||||||||||| ||||  ||||| |||||||  |||||||| |||| |||||||||||||    
T  39786357 tactcccttcgtcccttaatagatgacttagttgacaatatatattattgatttgacatactttgaccat 39786426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 216 - 280
Target Start/End: Original strand, 19633854 - 19633918
Alignment:
Q  216 cctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||| |||| |||| |||||| |||||||  |||||||||||||  ||||||||||||    
T  19633854 cctccgtccctcaatagatgacctagttgacaatatatattattgacttgacctactttgaccat 19633918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 40250839 - 40250771
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacc 278  Q
    ||||||| |||||||| ||||| ||||  ||||| ||||||| |||||||||||||| ||| |||||||    
T  40250839 atactccttccgtcccataatagatgacatagttgacaatatacattattgacttgacatagtttgacc 40250771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 26205968 - 26205933
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagtt 243  Q
    ||||||||||||||||||| ||||||||||||||||    
T  26205968 taatactccctccgtccctaaataaatgatctagtt 26205933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 51736953 - 51737023
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||| ||||| | || |||| |||||||| || ||||||| |||||||||||| ||||| |||||||||    
T  51736953 atactctctccgactctcaatagatgatctatttgacaatatacattattgacttaatatattttgaccat 51737023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 5735270 - 5735303
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagtt 243  Q
    ||||||||||||||||| ||||||||||||||||    
T  5735270 atactccctccgtccctaaataaatgatctagtt 5735303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Original strand, 28166273 - 28166306
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagtt 243  Q
    ||||||||||||||||| ||||||||||||||||    
T  28166273 atactccctccgtccctaaataaatgatctagtt 28166306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 243
Target Start/End: Complemental strand, 45198602 - 45198569
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagtt 243  Q
    ||||||||||||||||| ||||||||||||||||    
T  45198602 atactccctccgtccctaaataaatgatctagtt 45198569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Complemental strand, 46212616 - 46212579
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagtt 243  Q
    ||||||||||||||||||||| ||||||||| ||||||    
T  46212616 aataatactccctccgtccctaaataaatgacctagtt 46212579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 42187007 - 42187055
Alignment:
Q  218 tccgtcccttaataaatgatctagttaacaatatgcattattgacttga 266  Q
    ||||||| |||||| |||| |||||| ||||||| ||||||||||||||    
T  42187007 tccgtcctttaatagatgacctagttgacaatatacattattgacttga 42187055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 64; Significance: 5e-28; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 35447995 - 35448066
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  35447995 aatactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 35448066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 42148570 - 42148499
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  42148570 aatactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 42148499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 38698224 - 38698155
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  38698224 tactccctccgtcccttaataaatgacttagttgacaatatgcattattgacttgatatactttgaccat 38698155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 23988840 - 23988769
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||| |||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  23988840 aatactccatccgtcccttaataaatgacttagttgacaatatgcattattgacttgatatactttgaccat 23988769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 5212919 - 5212991
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||| |||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  5212919 taatactccctccgtctcttaataaatgacctagttgacaatatacattattgacttgacatactttgaccat 5212991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 4299832 - 4299902
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  4299832 atactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 4299902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 22613708 - 22613778
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  22613708 atactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 22613778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 32002013 - 32002083
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||| | |||| ||||||| |||||||||||||| |||||||||||||    
T  32002013 atactccctccgtcccttaataaatgacccagttgacaatatacattattgacttgacatactttgaccat 32002083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 39895042 - 39894973
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||| |||||||||||||    
T  39895042 tactccctccgtcccttaataaatgacccagttgacaatatacattattgacttgacatactttgaccat 39894973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 970400 - 970330
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| ||||||| |||| |||||||||||||||    
T  970400 atactccctccgtccctcaataaatgacctagttgacaatatacattattaacttaatatactttgaccat 970330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 16048347 - 16048277
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  16048347 atactccgtccgtccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 16048277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 32334637 - 32334706
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    ||||||||||||||||||||||||||| | |||| ||||||| ||||||||| |||| ||||||||||||    
T  32334637 atactccctccgtcccttaataaatgacccagttgacaatatacattattgatttgacatactttgacca 32334706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 216 - 280
Target Start/End: Complemental strand, 37516401 - 37516337
Alignment:
Q  216 cctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||| || | |||||| ||||||| ||||||||||||||||||||||||||||    
T  37516401 cctccgtcccttaatagataacctagttgacaatatacattattgacttgatatactttgaccat 37516337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 39036668 - 39036602
Alignment:
Q  214 tccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||| |||| |||||| ||||||| |||||||||||||  |||||||||||||    
T  39036668 tccctccgtcccttaatagatgacctagttgacaatatacattattgacttgtcatactttgaccat 39036602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 39406026 - 39405956
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||| ||| ||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  39406026 atactccatccttccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 39405956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 43067483 - 43067413
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||| ||||||||| ||||||||| |||||| ||||||| ||||||||| || |||||||||||||||    
T  43067483 atactccatccgtccctcaataaatgacctagttgacaatatacattattgatttaatatactttgaccat 43067413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 5364685 - 5364616
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||| |||||||||||||||||||| | |||| ||||||| |||||||||||||| ||| |||||||||    
T  5364685 tactctctccgtcccttaataaatgacccagttgacaatatacattattgacttgacatattttgaccat 5364616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 14475230 - 14475299
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||| | |||| |||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  14475230 tactccctccgtccttcaatagatgacctagttgacaatatacattattgacttgacatactttgaccat 14475299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 35290547 - 35290478
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| |||||||||||||||| |||| |||||| ||||||| |||||||||||||  |||||||||||||    
T  35290547 tacttcctccgtcccttaatagatgacctagttgacaatatacattattgacttgtcatactttgaccat 35290478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 37843575 - 37843644
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||| |||| |||| ||| || ||||||| |||||||||||||| |||||||||||||    
T  37843575 tactccctccgtccctcaatagatgacctacttgacaatatacattattgacttgacatactttgaccat 37843644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 29627530 - 29627463
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    ||||||||||||||||| ||||||||| | |||| ||||||| ||| |||||||||| ||||||||||    
T  29627530 atactccctccgtccctaaataaatgacccagttgacaatatacataattgacttgacatactttgac 29627463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 4924838 - 4924907
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| |||||||||||||||| |||| ||| || |||||||  ||||||||||||| |||||||||||||    
T  4924838 tacttcctccgtcccttaatagatgacctaattgacaatatatattattgacttgacatactttgaccat 4924907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 211 - 277
Target Start/End: Original strand, 40512680 - 40512746
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    ||||| ||||||||||||||||||||   |||| ||||||| ||||||||| |||| ||||||||||    
T  40512680 tactctctccgtcccttaataaatgactcagttgacaatatacattattgatttgacatactttgac 40512746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 43517060 - 43517125
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||| |||||||||||||||| ||||  ||||| |||||||  ||||||||||||| |||||||||    
T  43517060 tacttcctccgtcccttaatagatgacttagttgacaatatatattattgacttgacatactttga 43517125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 42148307 - 42148339
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||| ||||||||||||||||    
T  42148307 tactccctccgtccctaaataaatgatctagtt 42148339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 8e-27; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 23249113 - 23249044
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  23249113 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 23249044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 30290185 - 30290116
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  30290185 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 30290116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 29791205 - 29791134
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  29791205 aatactccctacgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 29791134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 2805475 - 2805545
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||    
T  2805475 atactccctccgtcccttaataaatgacctagttgacaatatgcatcattgacttgatatactttgaccat 2805545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 43066389 - 43066318
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||| |||||  ||||||| ||||||||||||||||||||||||||||    
T  43066389 aatactccctccgtcccttaataaatgacctagtcgacaatatacattattgacttgatatactttgaccat 43066318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 45082075 - 45082004
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||| ||||||    
T  45082075 aatactccctccgtcccttaataaatgacctagttgacaatatgcattattgatttgatatacttcgaccat 45082004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 30380796 - 30380722
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| |||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| |||||||||||||    
T  30380796 aatagtactccctccgtcccttaataaatgatccagttgacaatatacattattgacttgacatactttgaccat 30380722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 14522640 - 14522571
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||| |||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  14522640 tactccctccgtcccttaatagatgacctagttgacaatatacattattgacttgatatactttgaccat 14522571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 8350877 - 8350949
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||| ||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  8350877 taatactccctccatcccttaataaatgacctagttgacaatatacattattgacttgacatactttgaccat 8350949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 18809538 - 18809468
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  18809538 atactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 18809468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 3293101 - 3293170
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||| |||||||||||||    
T  3293101 tactccctccgtcccttaataaatgacccagttgacaatatacattattgacttgacatactttgaccat 3293170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 2986586 - 2986517
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||  ||||| ||||||| |||||||||||||| ||| |||||||||    
T  2986586 tactccctccgtcccttaataaatgacttagttgacaatatacattattgacttgacatattttgaccat 2986517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 219 - 276
Target Start/End: Complemental strand, 39361378 - 39361321
Alignment:
Q  219 ccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||    
T  39361378 ccgtcccttaataaatgacctagttgacaatatgcattattgatttgatatactttga 39361321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 31127804 - 31127870
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||| ||||||||| |||||| |||||||  ||||||||||| |||||||||||    
T  31127804 atactccctccgtccctcaataaatgacctagttgacaatatatattattgacttaatatactttga 31127870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 213 - 279
Target Start/End: Complemental strand, 38845866 - 38845800
Alignment:
Q  213 ctccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||||||||||||||||||||| | |||| ||||||| |||| ||||||||| ||||||||||||    
T  38845866 ctccctccgtcccttaataaatgacccagttgacaatatacattgttgacttgacatactttgacca 38845800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 6471106 - 6471041
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||| ||||||||||| |||| |||||| ||||||| |||||||||||||| |||||||||    
T  6471106 tactccctctgtcccttaatagatgacctagttgacaatatacattattgacttgacatactttga 6471041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 12893789 - 12893720
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||| | ||||||| ||| || |||||||||||||||||||| | |||||||||||||    
T  12893789 tactccctccgtccctcagtaaatgacctatttgacaatatgcattattgacttaacatactttgaccat 12893720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 37710160 - 37710092
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||| |||||||||||||||||||   |||| ||||||| |||||||||||||| ||||||||||||    
T  37710160 tactccatccgtcccttaataaatgactcagttgacaatatacattattgacttgacatactttgacca 37710092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 40013909 - 40013843
Alignment:
Q  214 tccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||| |||||||   |||| ||||||| |||||||||||||| |||||||||||||    
T  40013909 tccctccgtcccttagtaaatgactcagttgacaatatacattattgacttgacatactttgaccat 40013843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 13138132 - 13138201
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||| |||||| |||| |||||| | ||||| |||||||||||||| ||| |||||||||    
T  13138132 tactccctccgtcctttaatagatgacctagttgataatatacattattgacttgacatattttgaccat 13138201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 1580768 - 1580834
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||| ||||||||||||| ||||   ||||||| ||||||||| |||| |||||||||||||    
T  1580768 tactccctccgttccttaataaatgacctag---acaatatacattattgagttgacatactttgaccat 1580834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 10658239 - 10658169
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| |||||||||| | |||| |||||||| || ||||||| |||||||||||| | |||||||||||||    
T  10658239 atacaccctccgtccttcaatagatgatctatttgacaatatacattattgacttaacatactttgaccat 10658169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 209 - 279
Target Start/End: Complemental strand, 38739920 - 38739850
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    ||||||||||||||||  |||||||||| | |||| |||||||  |||||||| |||| ||||||||||||    
T  38739920 aatactccctccgtccggtaataaatgacccagttgacaatatatattattgatttgacatactttgacca 38739850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 207 - 243
Target Start/End: Original strand, 40013647 - 40013683
Alignment:
Q  207 ataatactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||||||||||||||||| ||||||    
T  40013647 ataatactccctccgtcccttaataaatgacctagtt 40013683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 228 - 280
Target Start/End: Complemental strand, 45253990 - 45253938
Alignment:
Q  228 aataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| |||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  45253990 aatagatgacctagttgacaatatacattattgacttgacatactttgaccat 45253938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Complemental strand, 3293365 - 3293331
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||||| ||||||||||||||||    
T  3293365 aatactccctccgtccctaaataaatgatctagtt 3293331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 206 - 272
Target Start/End: Complemental strand, 3383674 - 3383608
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatact 272  Q
    |||| |||||| |||||||||||||| ||||| || || |||||||  ||||||||||| |||||||    
T  3383674 aatagtactccttccgtcccttaatagatgatatatttgacaatatatattattgacttaatatact 3383608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 6470624 - 6470680
Alignment:
Q  221 gtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    ||||||||||| |||| |||||| ||||||| ||||||||| |||| ||| ||||||    
T  6470624 gtcccttaatagatgacctagttgacaatatacattattgatttgagatattttgac 6470680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 62; Significance: 8e-27; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 36819957 - 36819888
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  36819957 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 36819888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 47081241 - 47081172
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  47081241 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 47081172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 2400547 - 2400477
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||| |||||||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||||    
T  2400547 atacttcctccgtcccttaataaatgatatagttgacaatatgcattattgactttatatactttgaccat 2400477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 210 - 276
Target Start/End: Original strand, 37950944 - 37951010
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| |||||    
T  37950944 atactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatattttga 37951010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 28185411 - 28185480
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||| ||||||||||||||||||||  ||||| ||||||||||||||||||||||||||||||||||||    
T  28185411 tactctctccgtcccttaataaatgacatagttgacaatatgcattattgacttgatatactttgaccat 28185480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 31466358 - 31466427
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  31466358 tactccctccgtcccttaataaatgacctagttgacaatatacattattgacttgacatactttgaccat 31466427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 36859208 - 36859277
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||  ||||| ||||||||||||||||| ||||||||||||||||||    
T  36859208 tactccctccgtcccttaataaatgacttagttgacaatatgcattattgatttgatatactttgaccat 36859277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 42086638 - 42086707
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||    
T  42086638 tactccctccgtcccttaataaatgatttagttgacaatatgtattattgacttgatatattttgaccat 42086707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 42834292 - 42834361
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||  ||||||||||||||||| ||||||||||||||||||    
T  42834292 tactccctccgtcccttaataaatgacctagtcgacaatatgcattattgatttgatatactttgaccat 42834361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 10464114 - 10464184
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  10464114 atactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 10464184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 48531584 - 48531514
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||| |||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  48531584 atactccctccgtcccttaatagatgacctagttgacaatatacattattgacttgacatactttgaccat 48531514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 4612087 - 4612155
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||||||||||||||||||||||| | |||| ||||||| |||||||||||||| ||||||||||||    
T  4612087 tactccctccgtcccttaataaatgacccagttgacaatatacattattgacttgacatactttgacca 4612155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 19073033 - 19072961
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||||| | |||| ||||||| ||||||||| |||| |||||||||||||    
T  19073033 taatactccctccgtcccttaataaatgacccagttgacaatatacattattgatttgacatactttgaccat 19072961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 37231562 - 37231632
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| |||||| || |||||| ||||||| |||||||||||| |||||||||||||||    
T  37231562 atactccctccgtccctcaataaacgacctagttgacaatatacattattgacttaatatactttgaccat 37231632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 47713501 - 47713571
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||| |||||||||||||||| | |||| ||||||| |||||||||||||| |||||||||||||    
T  47713501 atactccctctgtcccttaataaatgacccagttgacaatatacattattgacttgacatactttgaccat 47713571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 23473969 - 23474038
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||| ||||||||||||||||||| |||||| ||||||| |||||||||||| | |||||||||||||    
T  23473969 tactccatccgtcccttaataaatgacctagttgacaatatacattattgactttacatactttgaccat 23474038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 276
Target Start/End: Original strand, 32618942 - 32619007
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||||| ||||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||    
T  32618942 tactccttccgtcccttaataaatgacctaattgacaatatgcattattgactttatatactttga 32619007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 31110887 - 31110820
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    ||||||||||||||||| ||||||||||| |||| ||||||| ||| |||||||||| ||||||||||    
T  31110887 atactccctccgtccctaaataaatgatccagttgacaatatacataattgacttgaaatactttgac 31110820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 34478003 - 34478077
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| |||||||||||||||| ||||||||| |||||| ||||||| ||||||||| || | |||||||||||||    
T  34478003 aatattactccctccgtccctcaataaatgacctagttgacaatatacattattgatttaacatactttgaccat 34478077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 210 - 277
Target Start/End: Original strand, 35500746 - 35500813
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    ||||||||||||||||| ||||| ||| |||||| ||||||| |||||||||||| | ||||||||||    
T  35500746 atactccctccgtccctcaataattgacctagttgacaatatacattattgacttaagatactttgac 35500813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 211 - 277
Target Start/End: Complemental strand, 36905787 - 36905721
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    |||||||||||||||| ||||||||| | |||| ||||||| ||| |||||||||| ||||||||||    
T  36905787 tactccctccgtccctaaataaatgacccagttgacaatatacataattgacttgacatactttgac 36905721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 47538184 - 47538115
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||| ||||||||| |||| |||||| ||||||| |||||| ||||||| |||| ||||||||    
T  47538184 tactccctccgccccttaatagatgacctagttgacaatatacattatggacttgacataccttgaccat 47538115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 214 - 280
Target Start/End: Complemental strand, 21392276 - 21392210
Alignment:
Q  214 tccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||| |||| |||||||||| | |||||| ||||||| ||||||| |||||| |||||||||||||    
T  21392276 tcccttcgtctcttaataaataacctagttgacaatatacattattaacttgacatactttgaccat 21392210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 211 - 264
Target Start/End: Original strand, 24151581 - 24151634
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgactt 264  Q
    |||||||||||||||||||||  ||| ||| || ||||||| ||||||||||||    
T  24151581 tactccctccgtcccttaataggtgacctatttgacaatatacattattgactt 24151634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 44479750 - 44479790
Alignment:
Q  240 agttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| ||||||| |||||||||||||| |||||||||||||    
T  44479750 agttgacaatatacattattgacttgacatactttgaccat 44479790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 8e-27; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 20662059 - 20662128
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  20662059 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 20662128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 207 - 280
Target Start/End: Complemental strand, 24151006 - 24150933
Alignment:
Q  207 ataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||    
T  24151006 ataatactccctccgtcccttaataaataatttagttgacaatatgcattattgacttgatatactttgaccat 24150933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 8796315 - 8796241
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||||||| | |||| ||||||| |||||||||||| | |||||||||||||    
T  8796315 aataatactccctccgtcccttaataaatgacccagttgacaatatacattattgacttaacatactttgaccat 8796241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 18992164 - 18992095
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||| |||||||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  18992164 tactcgctccgtcccttaataaatgacctagttgacaatatacattattgacttgacatactttgaccat 18992095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 206 - 280
Target Start/End: Original strand, 7097868 - 7097942
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||||||||  |||| |||||||  ||||||||||| | |||||||||||||    
T  7097868 aataatactccctccgtcccttaataaatgattcagttgacaatatagattattgacttaacatactttgaccat 7097942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 25163426 - 25163356
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| |||||||||  ||||| ||||||| |||||||||||| |||||||||||||||    
T  25163426 atactccctccgtccctcaataaatgacatagttgacaatatacattattgacttaatatactttgaccat 25163356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 30237433 - 30237359
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| |||||||| |||||||||||||||||  ||||| ||||||| |||||||||||||| |||||||||||||    
T  30237433 aatattactcccttcgtcccttaataaatgacatagttgacaatatacattattgacttgacatactttgaccat 30237359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 206 - 279
Target Start/End: Complemental strand, 31855084 - 31855011
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||||||||||||||||||||||||||||   |||| ||||||| | |||||||||||| ||||||||||||    
T  31855084 aataatactccctccgtcccttaataaatgactcagttgacaatatacgttattgacttgacatactttgacca 31855011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 16696015 - 16696085
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| |||| |||| |||||| ||||||| ||| |||||||||| |||||||||||||    
T  16696015 atactccctccgtccctcaatagatgacctagttgacaatatacatcattgacttgacatactttgaccat 16696085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 11114826 - 11114757
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||| |||||||||||||| |||| ||||||| ||||||||| |||| ||| |||||||||    
T  11114826 tactccctccgtctcttaataaatgatccagttgacaatatacattattgatttgacatattttgaccat 11114757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 25435672 - 25435603
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||| |||||||||||||||||||| | |||| ||||||| ||||||||| |||| |||||||||||||    
T  25435672 tactctctccgtcccttaataaatgacccagttgacaatatacattattgatttgacatactttgaccat 25435603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 22020537 - 22020469
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||||||||||||||| ||||||| | |||| ||||||| |||||||||||||| ||||||| ||||    
T  22020537 tactccctccgtcccttattaaatgacccagttgacaatatacattattgacttgacatactttaacca 22020469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 280
Target Start/End: Complemental strand, 33121805 - 33121734
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||| |||||| ||||||||||||  || |||||||  |||||||||||||| ||||||||||||    
T  33121805 aatactccctctgtccctaaataaatgatctgtttgacaatatatattattgacttgatgtactttgaccat 33121734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 643430 - 643500
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| |||||||||   |||| ||||||| ||| |||||||||| |||||||||||||    
T  643430 atactccctccgtccctaaataaatgactcagttgacaatatacataattgacttgacatactttgaccat 643500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 211 - 251
Target Start/End: Original strand, 29979024 - 29979064
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatat 251  Q
    |||||||||||||||||||||||||| |||||| |||||||    
T  29979024 tactccctccgtcccttaataaatgacctagttgacaatat 29979064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 19068769 - 19068840
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||| |||| ||||| |||| |||||||| || |||| |||||||||||| || | |||||||||||||    
T  19068769 aatactctctccatccctcaatagatgatctatttgacaaaatgcattattgatttaacatactttgaccat 19068840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 243
Target Start/End: Original strand, 25435407 - 25435444
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagtt 243  Q
    ||||||||||||||||| ||| ||||||||||||||||    
T  25435407 aataatactccctccgttcctcaataaatgatctagtt 25435444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 33121542 - 33121574
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||||||||||||| ||||||    
T  33121542 tactccctccgtcccttaataaatgacctagtt 33121574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 8e-27; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 50876625 - 50876556
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  50876625 tactccctccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 50876556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 52379253 - 52379181
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  52379253 taatactccctccgtcctttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 52379181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 25532040 - 25531970
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||| |||||| ||||||| ||||||||||||||||||||||||||||    
T  25532040 atactccctccgtcccttaataaatgacctagttgacaatatacattattgacttgatatactttgaccat 25531970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 42708762 - 42708692
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  42708762 atactccatccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 42708692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 48264810 - 48264880
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  48264810 atactccctccgtcccttaataaatgacctagttgacaatatgcattattgagttgatatactttgaccat 48264880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 39354264 - 39354333
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| |||||||||    
T  39354264 tactccctccgtcccttaataaatgacctagttgacagtatgcattattgacttgatatattttgaccat 39354333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 208 - 280
Target Start/End: Complemental strand, 37281356 - 37281284
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||| ||||||||||| |||||||  ||||||||||||| |||||||||||||    
T  37281356 taatactccctccgtcccttaatagatgatctagttgacaatatatattattgacttgacatactttgaccat 37281284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 213 - 280
Target Start/End: Original strand, 48219644 - 48219711
Alignment:
Q  213 ctccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||    
T  48219644 ctccttccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatacgttgaccat 48219711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Original strand, 3898570 - 3898640
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  3898570 atactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 3898640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 16265295 - 16265225
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  16265295 atactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 16265225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 16266424 - 16266354
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  16266424 atactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 16266354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 26441896 - 26441826
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  26441896 atactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 26441826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 43680332 - 43680262
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| |||||| ||||||| |||||||||||| |||||||||||||||    
T  43680332 atactccctccgtccctcaataaatgacctagttgacaatatacattattgacttaatatactttgaccat 43680262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 276
Target Start/End: Complemental strand, 29162104 - 29162039
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||||||||||| |||||||||    
T  29162104 tactccctccgtcccttaataaacgatctagttgacaatatacattattgacttgagatactttga 29162039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 30529050 - 30529119
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| ||| |||||||||    
T  30529050 tactccctccgtcccttaataaatgacctagttgacaatatacattattgacttgagataatttgaccat 30529119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 279
Target Start/End: Original strand, 32988348 - 32988417
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    ||||||||||||||||||||||||||||| |||| ||||||| |||||||||||||| ||| ||||||||    
T  32988348 atactccctccgtcccttaataaatgatccagttgacaatatacattattgacttgacatattttgacca 32988417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 38458991 - 38458922
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||| ||||||||||||||| | |||| ||||||| |||||||||||||| |||||||||||||    
T  38458991 tactccctccatcccttaataaatgacccagttgacaatatacattattgacttgacatactttgaccat 38458922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 211 - 279
Target Start/End: Complemental strand, 1849962 - 1849894
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||| ||||||||||||||||||| | |||| ||||||| |||||||||||||| ||||||||||||    
T  1849962 tactccatccgtcccttaataaatgacccagttgacaatatacattattgacttgacatactttgacca 1849894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 24982613 - 24982543
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||| ||||||||| || ||| |||||||  ||||||||||| |||||||||||||||    
T  24982613 atactccctccgtccctcaataaatgaccttgttgacaatatatattattgacttaatatactttgaccat 24982543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 211 - 280
Target Start/End: Complemental strand, 50539521 - 50539452
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||||||||||   |||| ||||||| ||| |||||||||| |||||||||||||    
T  50539521 tactccctccgtcccttaataaatgactcagttgacaatatacataattgacttgacatactttgaccat 50539452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 211 - 279
Target Start/End: Original strand, 49805252 - 49805320
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgacca 279  Q
    |||||||||||| ||||||||||||| | |||| ||||||| |||| ||||||||| ||||||||||||    
T  49805252 tactccctccgttccttaataaatgacccagttgacaatatacattgttgacttgacatactttgacca 49805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 209 - 276
Target Start/End: Original strand, 45234847 - 45234914
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    ||||||||||||||| |||||||||||| |||||| ||||||| ||||||| | |||| |||||||||    
T  45234847 aatactccctccgtctcttaataaatgacctagttgacaatatacattattaatttgacatactttga 45234914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 280
Target Start/End: Complemental strand, 4605261 - 4605191
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||| |||| ||| || ||||||| |||||||||||| | |||||||| ||||    
T  4605261 atactccctccgtcccttaatagatgacctatttgacaatatacattattgactttacatactttggccat 4605191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 208 - 280
Target Start/End: Original strand, 23569671 - 23569743
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||| ||||||||| ||  || |||||||  |||||||||||||  ||||||||||||    
T  23569671 taatactccctccgtccctaaataaatgacctgtttgacaatatatattattgacttgacgtactttgaccat 23569743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 32566001 - 32565945
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttg 265  Q
    ||||||||||| || |||||||| | ||||||||| ||||||||||||||| |||||    
T  32566001 aatactccctcagttccttaatagacgatctagttgacaatatgcattattaacttg 32565945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 23569938 - 23569903
Alignment:
Q  208 taatactccctccgtcccttaataaatgatctagtt 243  Q
    ||||||||||||||||||| ||||||||||||||||    
T  23569938 taatactccctccgtccctcaataaatgatctagtt 23569903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 3529174 - 3529208
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||||||||| ||||||||||||    
T  3529174 aatactccctccgtcccttaattaatgatctagtt 3529208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 50539258 - 50539292
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||||| ||||||||||||||||    
T  50539258 aatactccctccgtccctaaataaatgatctagtt 50539292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 52378983 - 52379021
Alignment:
Q  205 taataatactccctccgtcccttaataaatgatctagtt 243  Q
    ||||| |||||||||||||||| ||||||||||||||||    
T  52378983 taatactactccctccgtccctaaataaatgatctagtt 52379021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 276
Target Start/End: Original strand, 21034530 - 21034594
Alignment:
Q  212 actccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttga 276  Q
    |||||||| |||||| |||| || ||||| || ||||||| |||||||||||| | |||||||||    
T  21034530 actccctctgtccctcaatagataatctatttgacaatatacattattgacttaacatactttga 21034594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 59; Significance: 5e-25; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 280
Target Start/End: Complemental strand, 117587 - 117513
Alignment:
Q  206 aataatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||| ||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||    
T  117587 aataatattccctccgtcccttaataaatgacctagttgacaatatgtattattgacttgatatactttgaccat 117513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 211 - 243
Target Start/End: Original strand, 117321 - 117353
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagtt 243  Q
    |||||||||||||||| ||||||||||||||||    
T  117321 tactccctccgtccctaaataaatgatctagtt 117353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 209 - 280
Target Start/End: Original strand, 15214 - 15285
Alignment:
Q  209 aatactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||||||    
T  15214 aatactccctccgtcccttaataaatgacctagttgacaatatacattattgacttgacatactttgaccat 15285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 218 - 280
Target Start/End: Original strand, 44115 - 44177
Alignment:
Q  218 tccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||    
T  44115 tccgtcccttaataaatgacctagttgacaatatgcattattgacttgatatactttgaccat 44177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 13005 - 12944
Alignment:
Q  219 ccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||| | |||| ||||||| |||||||||||||| |||||||||||||    
T  13005 ccgtcccttaataaatgacccagttgacaatatacattattgacttgacatactttgaccat 12944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 10646 - 10585
Alignment:
Q  219 ccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||| | |||| ||||||| |||||||||||||| |||||||||||||    
T  10646 ccgtcccttaataaatgacccagttgacaatatacattattgacttgacatactttgaccat 10585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 219 - 280
Target Start/End: Complemental strand, 14312 - 14251
Alignment:
Q  219 ccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    |||||||||||||||||| | |||| ||||||| |||||||||||||| |||||||||||||    
T  14312 ccgtcccttaataaatgacccagttgacaatatacattattgacttgacatactttgaccat 14251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 211 - 280
Target Start/End: Original strand, 41217 - 41286
Alignment:
Q  211 tactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgaccat 280  Q
    ||||||||||||| ||||||||||||  ||||| ||||||| | |||||||||||| ||||||| |||||    
T  41217 tactccctccgtctcttaataaatgacttagttgacaatatacgttattgacttgacatactttaaccat 41286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 210 - 277
Target Start/End: Complemental strand, 14600 - 14533
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgacttgatatactttgac 277  Q
    ||||||| ||||||||  |||| |||| |||||| ||||||| ||||||||| |||||||||||||||    
T  14600 atactccatccgtcccacaatagatgacctagttgacaatatacattattgatttgatatactttgac 14533  T

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Target: scaffold0604 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0604
Description:

Target: scaffold0604; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 210 - 263
Target Start/End: Complemental strand, 1370 - 1317
Alignment:
Q  210 atactccctccgtcccttaataaatgatctagttaacaatatgcattattgact 263  Q
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T  1370 atactccctccgtccgtcaatagatgacctagttgacaatatacattattgact 1317  T

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