View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6729_high_18 (Length: 269)

Name: NF6729_high_18
Description: NF6729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6729_high_18
NF6729_high_18
[»] chr6 (42 HSPs)
chr6 (1-252)||(7223611-7223863)
chr6 (1-252)||(19748432-19748681)
chr6 (1-252)||(26053077-26053326)
chr6 (1-252)||(26073130-26073379)
chr6 (13-252)||(15527903-15528140)
chr6 (1-252)||(17103294-17103543)
chr6 (13-151)||(22498233-22498371)
chr6 (1-252)||(23897910-23898158)
chr6 (1-151)||(11327343-11327493)
chr6 (13-151)||(17543523-17543661)
chr6 (1-151)||(7918131-7918281)
chr6 (2-252)||(17250156-17250404)
chr6 (14-151)||(27233093-27233230)
chr6 (1-136)||(3573680-3573816)
chr6 (1-126)||(27614437-27614562)
chr6 (168-252)||(21354839-21354923)
chr6 (13-114)||(27890621-27890722)
chr6 (168-252)||(17543686-17543770)
chr6 (168-252)||(30912358-30912442)
chr6 (1-100)||(31108404-31108503)
chr6 (180-252)||(22498843-22498915)
chr6 (1-150)||(30912187-30912336)
chr6 (56-151)||(4841665-4841760)
chr6 (169-252)||(11327518-11327601)
chr6 (179-252)||(7918338-7918411)
chr6 (56-105)||(8275366-8275415)
chr6 (54-150)||(2912095-2912191)
chr6 (19-82)||(21354942-21355005)
chr6 (174-229)||(27614594-27614651)
chr6 (200-252)||(2912226-2912278)
chr6 (200-252)||(10509001-10509053)
chr6 (25-89)||(23506102-23506166)
chr6 (213-252)||(27233268-27233307)
chr6 (54-109)||(33583501-33583555)
chr6 (214-252)||(4841718-4841756)
chr6 (95-149)||(10508892-10508946)
chr6 (52-85)||(2912158-2912191)
chr6 (168-217)||(7918294-7918343)
chr6 (1-114)||(33592932-33593044)
chr6 (212-252)||(2912148-2912188)
chr6 (33-109)||(20432406-20432482)
chr6 (13-89)||(31407569-31407645)
[»] chr1 (37 HSPs)
chr1 (4-252)||(16125239-16125485)
chr1 (3-252)||(9954816-9955065)
chr1 (1-252)||(9351844-9352093)
chr1 (1-248)||(13100294-13100538)
chr1 (13-252)||(19009741-19009976)
chr1 (1-252)||(23528755-23529004)
chr1 (1-134)||(14074264-14074397)
chr1 (1-136)||(21846055-21846190)
chr1 (29-252)||(9128647-9128870)
chr1 (1-228)||(25146549-25146775)
chr1 (54-252)||(18304645-18304840)
chr1 (54-252)||(32881426-32881615)
chr1 (1-252)||(42179852-42180095)
chr1 (23-151)||(17055722-17055850)
chr1 (15-253)||(47785957-47786192)
chr1 (20-245)||(17869550-17869773)
chr1 (168-252)||(13276212-13276296)
chr1 (168-252)||(9327159-9327245)
chr1 (2-105)||(17197311-17197414)
chr1 (174-252)||(12513380-12513458)
chr1 (19-148)||(41032572-41032701)
chr1 (25-109)||(12002666-12002748)
chr1 (171-252)||(18228300-18228380)
chr1 (1-109)||(16434749-16434857)
chr1 (15-135)||(30619156-30619275)
chr1 (35-94)||(9321550-9321609)
chr1 (25-109)||(8773508-8773589)
chr1 (19-89)||(12513531-12513601)
chr1 (19-109)||(22789423-22789513)
chr1 (64-136)||(13276112-13276182)
chr1 (34-90)||(27502169-27502225)
chr1 (34-73)||(12002751-12002790)
chr1 (213-252)||(13100392-13100431)
chr1 (218-252)||(17055995-17056029)
chr1 (1-45)||(9954777-9954821)
chr1 (54-86)||(17056001-17056033)
chr1 (52-84)||(18304708-18304740)
[»] chr5 (24 HSPs)
chr5 (1-252)||(18843814-18844063)
chr5 (1-252)||(19579041-19579292)
chr5 (1-252)||(41688447-41688695)
chr5 (1-252)||(18051314-18051560)
chr5 (27-252)||(43234967-43235190)
chr5 (13-240)||(20321054-20321279)
chr5 (57-246)||(23172265-23172452)
chr5 (1-135)||(19042209-19042343)
chr5 (169-252)||(19979698-19979781)
chr5 (2-104)||(15051879-15051981)
chr5 (1-252)||(27339968-27340216)
chr5 (25-114)||(41427654-41427743)
chr5 (168-252)||(21059102-21059186)
chr5 (1-89)||(22645508-22645596)
chr5 (1-109)||(19377843-19377951)
chr5 (52-151)||(43005691-43005790)
chr5 (62-114)||(22984643-22984695)
chr5 (1-71)||(6852347-6852417)
chr5 (57-151)||(38158101-38158195)
chr5 (185-249)||(22645681-22645746)
chr5 (210-254)||(19042406-19042450)
chr5 (23-105)||(24648253-24648335)
chr5 (54-150)||(21058990-21059087)
chr5 (189-252)||(38158221-38158284)
[»] scaffold0186 (1 HSPs)
scaffold0186 (2-252)||(8542-8788)
[»] chr3 (48 HSPs)
chr3 (1-252)||(24619978-24620230)
chr3 (13-252)||(28745869-28746112)
chr3 (1-249)||(39428004-39428255)
chr3 (1-252)||(29067383-29067624)
chr3 (1-252)||(42696946-42697195)
chr3 (40-151)||(20756220-20756331)
chr3 (13-114)||(8592192-8592293)
chr3 (2-151)||(22355848-22355993)
chr3 (1-252)||(8155910-8156160)
chr3 (2-108)||(3041464-3041570)
chr3 (4-151)||(27676634-27676781)
chr3 (168-245)||(15515202-15515279)
chr3 (54-151)||(17064505-17064602)
chr3 (2-114)||(18014226-18014338)
chr3 (37-104)||(22971054-22971121)
chr3 (1-151)||(13286142-13286292)
chr3 (54-151)||(25870156-25870253)
chr3 (2-114)||(8560239-8560351)
chr3 (1-109)||(20766682-20766790)
chr3 (23-114)||(27090677-27090768)
chr3 (1-151)||(6136350-6136500)
chr3 (54-151)||(3449144-3449241)
chr3 (13-114)||(19348788-19348889)
chr3 (1-102)||(41671426-41671527)
chr3 (189-252)||(17064420-17064483)
chr3 (2-75)||(9169869-9169942)
chr3 (54-151)||(28135960-28136057)
chr3 (200-252)||(20756138-20756190)
chr3 (168-252)||(22137377-22137459)
chr3 (200-252)||(22356030-22356082)
chr3 (197-252)||(3449267-3449322)
chr3 (23-85)||(13006089-13006151)
chr3 (168-252)||(22494734-22494811)
chr3 (13-59)||(24649542-24649588)
chr3 (4-114)||(21553677-21553786)
chr3 (19-75)||(30727658-30727714)
chr3 (1-151)||(10872496-10872646)
chr3 (20-150)||(22137476-22137606)
chr3 (20-109)||(17796805-17796894)
chr3 (20-109)||(19105245-19105334)
chr3 (1-114)||(27055328-27055441)
chr3 (213-252)||(6136457-6136496)
chr3 (189-252)||(21963528-21963590)
chr3 (189-252)||(21985964-21986026)
chr3 (213-252)||(25870210-25870249)
chr3 (205-243)||(25870350-25870388)
chr3 (54-151)||(9152819-9152915)
chr3 (52-85)||(25870219-25870252)
[»] chr7 (47 HSPs)
chr7 (1-252)||(17811446-17811696)
chr7 (20-252)||(24725272-24725507)
chr7 (1-252)||(20570666-20570915)
chr7 (1-252)||(44944626-44944875)
chr7 (25-252)||(5715388-5715609)
chr7 (13-252)||(4247455-4247692)
chr7 (1-244)||(5058636-5058876)
chr7 (23-252)||(27221517-27221740)
chr7 (1-151)||(24989555-24989704)
chr7 (1-136)||(11326496-11326631)
chr7 (19-252)||(14055350-14055587)
chr7 (19-252)||(14365378-14365615)
chr7 (54-252)||(8329878-8330075)
chr7 (54-252)||(8346365-8346563)
chr7 (168-252)||(24990017-24990101)
chr7 (25-151)||(8572336-8572460)
chr7 (13-114)||(8304321-8304422)
chr7 (4-252)||(8343586-8343830)
chr7 (168-252)||(26281256-26281339)
chr7 (13-136)||(9685087-9685210)
chr7 (13-108)||(25842524-25842619)
chr7 (2-108)||(23618211-23618317)
chr7 (54-148)||(39182357-39182451)
chr7 (2-114)||(1981107-1981217)
chr7 (169-252)||(6916879-6916961)
chr7 (55-150)||(8329814-8329909)
chr7 (19-136)||(1977762-1977878)
chr7 (54-151)||(7730193-7730290)
chr7 (181-242)||(11325087-11325148)
chr7 (54-151)||(26565382-26565479)
chr7 (200-252)||(7730321-7730373)
chr7 (200-252)||(9685222-9685274)
chr7 (55-151)||(21846282-21846378)
chr7 (200-252)||(27509921-27509973)
chr7 (15-114)||(4574965-4575064)
chr7 (23-114)||(8629531-8629622)
chr7 (4-150)||(8346250-8346396)
chr7 (207-252)||(22687649-22687694)
chr7 (168-252)||(26617422-26617502)
chr7 (19-109)||(22687066-22687156)
chr7 (1-83)||(26281171-26281251)
chr7 (57-151)||(30294444-30294538)
chr7 (26-75)||(8253990-8254039)
chr7 (68-131)||(27509260-27509323)
chr7 (219-252)||(4574919-4574952)
chr7 (54-114)||(21157527-21157587)
chr7 (169-209)||(21846393-21846433)
[»] chr4 (36 HSPs)
chr4 (1-252)||(9770211-9770460)
chr4 (1-252)||(9911192-9911441)
chr4 (1-252)||(36120923-36121171)
chr4 (13-252)||(5375763-5376001)
chr4 (1-254)||(23064742-23064995)
chr4 (20-248)||(5361765-5361989)
chr4 (30-151)||(8010946-8011067)
chr4 (1-147)||(6346736-6346882)
chr4 (168-252)||(13023669-13023753)
chr4 (54-252)||(10142998-10143195)
chr4 (169-252)||(17466178-17466261)
chr4 (2-109)||(55476228-55476335)
chr4 (1-252)||(8889327-8889564)
chr4 (13-136)||(13551465-13551588)
chr4 (168-247)||(37240361-37240440)
chr4 (13-127)||(13023780-13023894)
chr4 (1-109)||(37240479-37240587)
chr4 (40-114)||(8367437-8367511)
chr4 (54-135)||(10394824-10394905)
chr4 (55-151)||(7044961-7045057)
chr4 (1-89)||(7045204-7045292)
chr4 (1-105)||(7452750-7452853)
chr4 (200-252)||(13551600-13551652)
chr4 (56-136)||(24719788-24719868)
chr4 (54-150)||(17466278-17466374)
chr4 (52-107)||(4157269-4157324)
chr4 (52-107)||(4157556-4157611)
chr4 (2-75)||(8409790-8409863)
chr4 (216-252)||(4157054-4157090)
chr4 (23-106)||(5943062-5943145)
chr4 (213-252)||(6346843-6346882)
chr4 (54-109)||(8743599-8743654)
chr4 (213-247)||(24719782-24719816)
chr4 (213-254)||(5361853-5361894)
chr4 (52-109)||(9149554-9149611)
chr4 (54-86)||(4157050-4157082)
[»] chr2 (30 HSPs)
chr2 (1-252)||(31237757-31238007)
chr2 (23-252)||(1404882-1405109)
chr2 (1-151)||(20063921-20064071)
chr2 (5-136)||(19262101-19262232)
chr2 (1-151)||(30433013-30433163)
chr2 (13-108)||(27523889-27523984)
chr2 (41-252)||(36429947-36430156)
chr2 (2-108)||(20034004-20034110)
chr2 (13-114)||(974573-974675)
chr2 (1-151)||(25538926-25539076)
chr2 (21-252)||(35565755-35565984)
chr2 (1-109)||(21869102-21869210)
chr2 (168-252)||(31578103-31578187)
chr2 (2-108)||(7302023-7302129)
chr2 (169-248)||(1690675-1690754)
chr2 (177-252)||(30432518-30432593)
chr2 (28-108)||(34578130-34578210)
chr2 (55-252)||(15588690-15588880)
chr2 (55-147)||(16766987-16767079)
chr2 (1-114)||(19245824-19245937)
chr2 (169-252)||(20063813-20063896)
chr2 (54-151)||(13502507-13502604)
chr2 (1-105)||(8428466-8428570)
chr2 (213-252)||(13502561-13502600)
chr2 (36-75)||(34578085-34578124)
chr2 (58-136)||(1690566-1690644)
chr2 (218-252)||(25539222-25539256)
chr2 (1-107)||(27749290-27749396)
chr2 (34-75)||(20034114-20034155)
chr2 (219-251)||(34841784-34841816)
[»] chr8 (32 HSPs)
chr8 (1-246)||(7489064-7489307)
chr8 (1-252)||(5922148-5922396)
chr8 (1-252)||(11879699-11879948)
chr8 (1-252)||(11897115-11897364)
chr8 (1-252)||(45403128-45403377)
chr8 (1-252)||(23142274-23142522)
chr8 (19-252)||(19704256-19704485)
chr8 (1-150)||(24414068-24414217)
chr8 (41-252)||(15294769-15294977)
chr8 (41-252)||(15475138-15475346)
chr8 (6-243)||(32424440-32424677)
chr8 (2-104)||(16752268-16752370)
chr8 (1-247)||(6810925-6811167)
chr8 (4-108)||(2040360-2040464)
chr8 (168-252)||(31424262-31424346)
chr8 (55-149)||(17647197-17647291)
chr8 (1-240)||(29384093-29384335)
chr8 (169-252)||(9212202-9212285)
chr8 (2-109)||(40541602-40541709)
chr8 (4-134)||(17566313-17566443)
chr8 (54-151)||(15761192-15761289)
chr8 (25-105)||(7262006-7262086)
chr8 (168-252)||(22910148-22910232)
chr8 (35-102)||(27836114-27836181)
chr8 (168-252)||(27836410-27836494)
chr8 (168-252)||(3094189-3094283)
chr8 (19-135)||(15231835-15231951)
chr8 (169-244)||(6292289-6292364)
chr8 (213-252)||(29384200-29384239)
chr8 (54-135)||(22910037-22910118)
chr8 (213-252)||(17647199-17647238)
chr8 (52-84)||(17647197-17647229)
[»] scaffold0016 (2 HSPs)
scaffold0016 (13-151)||(56218-56356)
scaffold0016 (176-230)||(58736-58790)
[»] scaffold0417 (1 HSPs)
scaffold0417 (33-252)||(7268-7485)
[»] scaffold0042 (1 HSPs)
scaffold0042 (52-252)||(93537-93736)
[»] scaffold0079 (1 HSPs)
scaffold0079 (14-108)||(14720-14814)
[»] scaffold0603 (2 HSPs)
scaffold0603 (55-151)||(8794-8890)
scaffold0603 (50-85)||(8854-8889)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-108)||(38308-38414)
[»] scaffold0534 (1 HSPs)
scaffold0534 (4-134)||(885-1015)
[»] scaffold0510 (1 HSPs)
scaffold0510 (19-148)||(3-131)
[»] scaffold0027 (1 HSPs)
scaffold0027 (48-108)||(132943-133003)
[»] scaffold2084 (1 HSPs)
scaffold2084 (2-93)||(84-175)
[»] scaffold0182 (1 HSPs)
scaffold0182 (2-89)||(24646-24733)
[»] scaffold0526 (1 HSPs)
scaffold0526 (25-114)||(8391-8480)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-108)||(76090-76196)
[»] scaffold0048 (2 HSPs)
scaffold0048 (55-149)||(48497-48591)
scaffold0048 (54-149)||(61148-61243)
[»] scaffold0150 (1 HSPs)
scaffold0150 (52-109)||(33178-33235)
[»] scaffold0028 (1 HSPs)
scaffold0028 (54-109)||(145828-145883)
[»] scaffold0001 (1 HSPs)
scaffold0001 (55-114)||(142864-142923)


Alignment Details
Target: chr6 (Bit Score: 135; Significance: 2e-70; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 7223863 - 7223611
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| ||||||    
T  7223863 gtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttgta 7223764  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnt-tctaaatatatgttataaatggtatatagccac 199  Q
    ||||||||| ||||| ||||||||||||||||| || ||||||||||||||              |   | ||||||||||||||||||||||||| ||     
T  7223763 gaatcgatataggaaattgtaaaatcgcaatcagaatcaatggattttaccaaacaaaataatactaaattaatatatgttataaatggtatatagtcat 7223664  T
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7223663 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattt 7223611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 19748681 - 19748432
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | |||||  ||||||| |||||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  19748681 gtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgta 19748582  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| ||||| |||||||||||||||||||| | ||||||||||||              | |||||||||| ||||||||| ||||||| |  |    
T  19748581 gaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc--agaaaataataatactaaatatattttataaatgatatatagtctta 19748484  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||||||| || |||||||||||| ||||    
T  19748483 aatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattt 19748432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 26053077 - 26053326
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| |||||||||||| ||| ||||||    
T  26053077 gtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttgta 26053176  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    |||||||||  |||| |||||||||||||||||||| | ||||||||||||              | |||| ||||||||||||||||||||||| || |    
T  26053177 gaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc--aaaaaataataatactaactatatgttataaatggtatatagtcata 26053274  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||| ||||||||||||||||||||||||||  || ||||||| |||||||||    
T  26053275 aataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattt 26053326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 26073130 - 26073379
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| ||||| ||||||||||||||| |||||||||||||||||| |||||||| |||||||||||||| |||||||||||| ||| ||||||    
T  26073130 gtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgacttttgta 26073229  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    |||||||||  |||| |||||||||||||||||||| | ||||||||||||              | |||| ||||||||||||||||||||||| || |    
T  26073230 gaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttacc--aaaaaataataatactaactatatgttataaatggtatatagtcata 26073327  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||| ||||||||||||||||||||||||||  || ||||||| |||||||||    
T  26073328 aataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattt 26073379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 15527903 - 15528140
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||||||||||||| ||||||||||| || ||| | |||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  15527903 actttacttcaggtcgaaaggaaatagcaaaatcggaactcggaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatatag 15528002  T
Q  113 gaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtt 212  Q
    ||| |||||||||||||||| ||| | ||||||||  ||              | ||||||||||||||||||||||||||||  | |||||||||||||    
T  15528003 gaaattgtaaaatcgcaatcgaaatcgatggattt--cccccaaaaaatttaatactaaatatatgttataaatggtatatagttataaatgacttagtt 15528100  T
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  15528101 tataagaaatcgtaaaatcgcaatcgaaatcgatggattt 15528140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 17103543 - 17103294
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| ||||| |||||||||||||| ||||||  ||||| |||||||||||||||| | ||||||||||||||||||||| ||||||    
T  17103543 gtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttactcaaggacttttgta 17103444  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| ||||| |||||||||||||||||||| | ||||||||||||              |  ||||||||||| ||||||| ||||||| |  |    
T  17103443 gaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc--taaaaaaattaataataaatatatgtcataaatgatatatagtcgta 17103346  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||| |||||||||||||||||||||||||||| | |||||||||||||||||    
T  17103345 aataacttagtttataagaaatcgtaaaatcgtaatcaaaatcgatggattt 17103294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 22498233 - 22498371
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||| ||| ||||||||||||||| ||    
T  22498233 actttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttactcaaagacttttgtagaatcgatatag 22498332  T
Q  113 gaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||| |||||||||||||||||||| | ||||||||||||    
T  22498333 gaaattgtaaaatcgcaatcaaaatcgatggattttacc 22498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 23898158 - 23897910
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | | ||| |||||||||||| | ||| |||||||| |  | | ||||||||| || |||||||||||||||||||||||  || ||||||    
T  23898158 gtcaaaatcgggattttgcttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactac-tttgta 23898060  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| | ||| |||||||||| ||||||||| | ||||||||||||              | |||||||||||||||||||||||||||| || |    
T  23898059 gaatcgatataagaaattgtaaaatctcaatcaaaatcgatggattttaccaaaaaaaaaaaa--tactaaatatatgttataaatggtatatagtcata 23897962  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23897961 aatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattt 23897910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 11327343 - 11327493
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| |  |||| |||||||| |||||||||||||||||| | |||| |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  11327343 gtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgta 11327442  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| ||||| |||||||||||||| ||||| | ||||||||||||    
T  11327443 gaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttacc 11327493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 17543523 - 17543661
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||||||||||| ||||||||||||| ||||||  |||||||| |||||||||||||||||||||||||||||| |||||||||||||||  |    
T  17543523 actttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcgaaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatattg 17543622  T
Q  113 gaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||| |||||||||||||||||||| | ||||||||||||    
T  17543623 gaaattgtaaaatcgcaatcaaaatcgatggattttacc 17543661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 7918131 - 7918281
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| |  |||| ||||||||||||||||||||||| |||  ||||| ||||||| |||||||||||||||| ||||||||||||||| ||||||    
T  7918131 gtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaattgcaatcaaaatcgaagaattttactcaaggacttttgta 7918230  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||| ||| ||||| |||||||||||||||||||| | ||||||||||||    
T  7918231 gaatcaatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 7918281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 17250404 - 17250156
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatc--gaaggattttactcaaggacatttgt 99  Q
    |||||||| | ||||| ||||||||||||||| ||| || || |||||||| |||||||||||||||||||   |||||||||||||||||| | || ||    
T  17250404 tcaaaatcgggactttacttcaggtcgaaaggaaatggcgaa-ttgggactcgtaaaatcgcaatcaaaataaagaaggattttactcaaggtctttagt 17250306  T
Q  100 agaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccac 199  Q
    |||||||  | || || ||||||| |||||||||||| ||||||||||||||              |  ||||||||| ||||||||  ||||||| ||     
T  17250305 agaatcgccatagaaaattgtaaattcgcaatcaaaatcaatggattttacc--aaaaaacaatagtaataaatatatattataaat-ttatatagtcat 17250209  T
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||| ||||    
T  17250208 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgaattt 17250156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 14 - 151
Target Start/End: Original strand, 27233093 - 27233230
Alignment:
Q  14 cttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagg 113  Q
    |||| ||||||||| |||||||||  |||||| ||||||  |||||||||||||||||| |||||||||||||||||| | || ||||||||| || ||     
T  27233093 ctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcaaggtctttagtagaatcgctataga 27233192  T
Q  114 aatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    || |||||||||||||||||||| | || |||||||||    
T  27233193 aaattgtaaaatcgcaatcaaaatcgatagattttacc 27233230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 3573680 - 3573816
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaa-gggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgt 99  Q
    ||||||||| | ||||| ||||||||||||| ||||||||||||||  ||||| ||||||||||||||||||||| |||| |||||||||  ||  ||||    
T  3573680 gtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatcgtaggaatttactcaactactcttgt 3573779  T
Q  100 agaatcgatagaggaatttgtaaaatcgcaatcaaaa 136  Q
    ||||| |||| | ||| ||||||||||||||||||||    
T  3573780 agaatagatataagaaattgtaaaatcgcaatcaaaa 3573816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 27614437 - 27614562
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    |||||||| || | ||| ||||||||||||||||||||| ||||| |||||| |||||||| ||||||||||||||||||||||||||| ||| |  |||    
T  27614437 gtcaaaattaggaatttacttcaggtcgaaagggaatagtaaaatcgggactcgtaaaatcacaatcaaaatcgaaggattttactcaatgacttgagta 27614536  T
Q  101 gaatcgatagaggaatttgtaaaatc 126  Q
    ||| | ||| ||||| ||||||||||    
T  27614537 gaaacaatataggaaattgtaaaatc 27614562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 21354923 - 21354839
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||| || |||| |||||||||||||||||||||||||||||| | |||| ||||||||||    
T  21354923 ctaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaataaaaaacgatggattt 21354839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 27890722 - 27890621
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||| || |||||||| ||| |||||||| ||| ||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||| ||    
T  27890722 actttacttcaagttgaaagggagtagtaaaattggaactcgtaaaatcgtaatcaaaattgaaggattttactcaaggacttttgtagaatcgatatag 27890623  T
Q  113 ga 114  Q
    ||    
T  27890622 ga 27890621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 17543686 - 17543770
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||| |  ||||||||||||||||||||||| ||||||||||| |||||||| || |||||    
T  17543686 ctaaatatatgttataaatggtatatagtcgtaaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagattt 17543770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 30912358 - 30912442
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||| ||||||| ||||||  || ||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  30912358 ctaaatatatgtgataaatgatatataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggattt 30912442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 31108503 - 31108404
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| | || | |||||| ||||||||||||| || ||||||||| |||||| ||||||    
T  31108503 gtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaatcgagattcgtaaaaccgcaatcaaaatcaaaagattttactaaaggacttttgta 31108404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 22498843 - 22498915
Alignment:
Q  180 tataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||| ||||||||||| || ||||||||| ||||||||||||||||||||| ||| | |||||||||||||||    
T  22498843 tatagatggtatatagtcataaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattt 22498915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 30912187 - 30912336
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| ||| ||| |||||||| ||||| |||||||||||| |  | | |||||||| ||| |||||| ||||||||||| ||||  || ||||||    
T  30912187 gtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatcgataatcgtaaaatctcaaccaaaattgaaggattttattcaactacttttgta 30912286  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttac 150  Q
     |||||||| | ||| |  || ||||||||||| || | |||||||||||    
T  30912287 aaatcgatataagaaatcatagaatcgcaatcataatcgatggattttac 30912336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 56 - 151
Target Start/End: Original strand, 4841665 - 4841760
Alignment:
Q  56 aaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    |||||| ||||||||||| |||||||||||||||  || ||||||||||||  | | ||| | |||||||||||||||||| | ||| ||||||||    
T  4841665 aaaatcacaatcaaaatcaaaggattttactcaactacttttgtagaatcgggataagaaatcgtaaaatcgcaatcaaaatcgatgtattttacc 4841760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 11327518 - 11327601
Alignment:
Q  169 taaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||| |||| |||||||||||| || || |||||| |||||| |||||||| |||||||||||| | |||||||||| ||||    
T  11327518 taaatacatgtgataaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattt 11327601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 179 - 252
Target Start/End: Original strand, 7918338 - 7918411
Alignment:
Q  179 ttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||| ||||||| || |||||||||| ||||||| |||||| |||||| || ||||||||||| |||||    
T  7918338 ttataaatgatatatagtcataaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattt 7918411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 8275366 - 8275415
Alignment:
Q  56 aaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatc 105  Q
    ||||||||||| |||||||||||||||||||||||||| |||||| ||||    
T  8275366 aaaatcgcaattaaaatcgaaggattttactcaaggacttttgtaaaatc 8275415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 2912095 - 2912191
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttac 150  Q
    ||||||||  |||| |||| ||||||||||||||||  || |||||||||| | || | ||| |||||||||||||||||||| | | |||||||||    
T  2912095 gtaaaatcataatcgaaattgaaggattttactcaactacttttgtagaattgttataagaaattgtaaaatcgcaatcaaaatcgacggattttac 2912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 19 - 82
Target Start/End: Complemental strand, 21355005 - 21354942
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattt 82  Q
    ||||| || |||||||||||| |||||  ||||| |||||||||||||||||||||| ||||||    
T  21355005 cttcaagttgaaagggaatagaaaaatcaggactcgtaaaatcgcaatcaaaatcgatggattt 21354942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 229
Target Start/End: Original strand, 27614594 - 27614651
Alignment:
Q  174 atatgttataaatggtatatagccacaaatgact--tagtttataagaaatcgtaaaa 229  Q
    |||||||||||||||||||||| || |||||| |  ||||||||||||||||||||||    
T  27614594 atatgttataaatggtatatagtcataaatgaattatagtttataagaaatcgtaaaa 27614651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 2912226 - 2912278
Alignment:
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||| |||||||| |||||||||||| ||| |||||||||||| ||||    
T  2912226 aaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaattt 2912278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 10509001 - 10509053
Alignment:
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||| || ||||||||||| | |||||||||||| ||||    
T  10509001 aaatgacttagtttataataagtcgtaaaatcgtaatcaaaatcgatgaattt 10509053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 23506166 - 23506102
Alignment:
Q  25 gtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaa 89  Q
    |||||||| |||||||||||| |  | |||||||||| |||| ||||||||||||||||| ||||    
T  23506166 gtcgaaagagaatagcaaaatcgaaaattgtaaaatcacaattaaaatcgaaggattttagtcaa 23506102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 27233268 - 27233307
Alignment:
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  27233268 tataagaaatcataaaatcgcaatcaaaatcgatggattt 27233307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 33583501 - 33583555
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    ||||||||  |||||||||||||| |||||||| |||||| |||||||||||||||    
T  33583501 gtaaaatcaaaatcaaaatcgaag-attttacttaaggacttttgtagaatcgata 33583555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 214 - 252
Target Start/End: Original strand, 4841718 - 4841756
Alignment:
Q  214 ataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  4841718 ataagaaatcgtaaaatcgcaatcaaaatcgatgtattt 4841756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 95 - 149
Target Start/End: Original strand, 10508892 - 10508946
Alignment:
Q  95 tttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggatttta 149  Q
    ||||||||||||||| | ||| ||||||||||||||||||||   ||||||||||    
T  10508892 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaattgatggatttta 10508946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 2912158 - 2912191
Alignment:
Q  52 ttgtaaaatcgcaatcaaaatcgaaggattttac 85  Q
    |||||||||||||||||||||||| |||||||||    
T  2912158 ttgtaaaatcgcaatcaaaatcgacggattttac 2912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 168 - 217
Target Start/End: Original strand, 7918294 - 7918343
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataa 217  Q
    |||||| ||||||||||||| ||||||| || |||||||||| |||||||    
T  7918294 ctaaatttatgttataaatgatatatagtcataaatgacttaatttataa 7918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 33592932 - 33593044
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | | ||| |||||  ||||||||||||| ||||||||  | | ||||||| |||||| |||||||| || |||||||||  || ||||||    
T  33592932 gtcaaaatcgggattttgcttcatatcgaaagggaataacaaaattgaaaatcgtaaaattgcaatcgaaatcgaatga-tttactcaactacttttgta 33593030  T
Q  101 gaatcgatagagga 114  Q
    |||| |||| ||||    
T  33593031 gaattgatatagga 33593044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 212 - 252
Target Start/End: Original strand, 2912148 - 2912188
Alignment:
Q  212 ttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||| ||||||||||| |||||||||| ||||||    
T  2912148 ttataagaaattgtaaaatcgcaatcaaaatcgacggattt 2912188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 109
Target Start/End: Original strand, 20432406 - 20432482
Alignment:
Q  33 ggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    ||||||||||||| |  | | ||||||||||||||||||| |||| |||||||| ||  |  |||||||||||||||    
T  20432406 ggaatagcaaaatcgaaaatcgtaaaatcgcaatcaaaattgaagaattttacttaactagttttgtagaatcgata 20432482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 89
Target Start/End: Complemental strand, 31407645 - 31407569
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaa 89  Q
    ||||| ||| |||| ||||||||||| |||||| |  | || ||||||| ||||||||||| || ||||||||||||    
T  31407645 actttgctttaggttgaaagggaataacaaaatcgaaaattataaaatcacaatcaaaatcaaaagattttactcaa 31407569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 4 - 252
Target Start/End: Original strand, 16125239 - 16125485
Alignment:
Q  4 aaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaa 103  Q
    |||||| ||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16125239 aaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaa 16125338  T
Q  104 tcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaat 203  Q
    |||||| | ||| |||||||||||||||||||| | |||||  |||||              | |||||||||||||||||||||||||||  || ||||    
T  16125339 tcgatataagaaattgtaaaatcgcaatcaaaatcgatggacgttacc--caaaaataataatactaaatatatgttataaatggtatatattcataaat 16125436  T
Q  204 gacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||||||    
T  16125437 gacttagtttataaaaaatcgtaaaatcgcaatcaaaatcaatggattt 16125485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 252
Target Start/End: Original strand, 9954816 - 9955065
Alignment:
Q  3 caaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtaga 102  Q
    ||||||| ||||||| ||| ||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||  |||||| |||  |||    
T  9954816 caaaatcggaactttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttaccaaaggacttttcaaga 9954915  T
Q  103 atcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaa 202  Q
    ||| ||| ||||| |||||||||||||||||| | | |||||||||||               | || ||||||||||||||||||||||||| || |||    
T  9954916 atccatataggaaattgtaaaatcgcaatcaagatcgatggattttacacaaaaaaataataatactgaatatatgttataaatggtatatagtcataaa 9955015  T
Q  203 tgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||    
T  9955016 tgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattt 9955065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 9351844 - 9352093
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||  ||||| |||||||||||||| |||||||||||| |||||| ||||||||||||||||||||| |||||||||  ||||||| ||||||    
T  9351844 gtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggattttatccaaggacttttgta 9351943  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||| ||| ||||| |||||||||| ||||||||| | ||| ||||||||              | |||||||||||||||||||||||||||| || |    
T  9351944 gaatctatataggaaattgtaaaatcacaatcaaaatcgatgaattttacc--caaaaaaattaatactaaatatatgttataaatggtatatagtcaaa 9352041  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||| |||||||||| |||||||||| ||||||    
T  9352042 aatgacttagtttataagaaatcataaaatcgcaatcaaaatcgacggattt 9352093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 13100538 - 13100294
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| ||||| ||||||||||||| ||||||| || ||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  13100538 gtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttactcaaggacatttgta 13100439  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| | ||| |  ||||||||||||||||| | ||||||||||||              | |||||||||||||| ||||||||||||| || |    
T  13100438 gaatcgatataagaaatcttaaaatcgcaatcaaaatcgatggattttacc---caaaaaataaatactaaatatatgttacaaatggtatatagtcata 13100342  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatgg 248  Q
    |||||||| ||||||||||||| ||||||||||| |||||||||||||    
T  13100341 aatgacttggtttataagaaattgtaaaatcgcaatcaaaatcgatgg 13100294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 19009741 - 19009976
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| |||||| |||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||| || |||||| |||||||| ||    
T  19009741 actttacttcagatcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatatag 19009840  T
Q  113 gaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtt 212  Q
    ||| |||||||||||||||||||| || |||||||||||              ||    | ||||||||||||||||||||||  | |||||||||| ||    
T  19009841 gaaattgtaaaatcgcaatcaaaatcattggattttaccccaaaaaaaaaatatt----aaatatgttataaatggtatatagttataaatgacttaatt 19009936  T
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  19009937 tataagaaatcgtaaaatcgcaatcaaaatcgatggattt 19009976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 23529004 - 23528755
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| |||||||  |||||||  ||| |||| || || || |||||| |||||||||||||||||||||||||||||||||||||||| ||||||    
T  23529004 gtcaaaatcggaactttatttcaggttaaaaaggaacagtaagatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgta 23528905  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| ||||| |||||||||||||||||||| | ||||||||||||              |  |||||||| |||||||||||||||||| || |    
T  23528904 gaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc--caataataataataataaatatacgttataaatggtatatagtcata 23528807  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||| |||||    
T  23528806 aatgacttcgtttataagaaatcgtaaaatcgcattcaaaatcgatagattt 23528755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 14074264 - 14074397
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||| |||  ||||||| ||||||||||||||||||||||||||||||| ||||||    
T  14074264 gtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttactcaaggacttttgta 14074363  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaa 134  Q
    ||||||||| ||||| ||||||||||||||||||    
T  14074364 gaatcgatataggaaattgtaaaatcgcaatcaa 14074397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 21846055 - 21846190
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| ||||| || |||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||||||| ||||||    
T  21846055 gtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgta 21846154  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaa 136  Q
    ||||||||| | ||| ||||||||||||||||||||    
T  21846155 gaatcgatataagaaattgtaaaatcgcaatcaaaa 21846190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 29 - 252
Target Start/End: Original strand, 9128647 - 9128870
Alignment:
Q  29 aaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgc 128  Q
    ||||||||||||||||| |||||| |||||||| | |||||||||||||||||||||| |||||  ||||||| ||||||| || || ||||||||||||    
T  9128647 aaagggaatagcaaaatcgggactcgtaaaatcacgatcaaaatcgaaggattttactaaaggatttttgtaggatcgatatagaaaattgtaaaatcgc 9128746  T
Q  129 aatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaa 228  Q
    ||||||||   ||| |||||||               | ||||| |||||||||||||||||||||| || |||| ||||||||||||||||||||| ||    
T  9128747 aatcaaaatttatgaattttacaaatgataataataatactaaagatatgttataaatggtatatagtcaaaaataacttagtttataagaaatcgtcaa 9128846  T
Q  229 atcgcagtcaaaatcgatggattt 252  Q
    |||||| |||||||||||| ||||    
T  9128847 atcgcaatcaaaatcgatgaattt 9128870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 25146549 - 25146775
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| ||||| |||||||| |||||||||||||||||| || | | |||||||||||||||||||||||||||||||||||||| | || |||    
T  25146549 gtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtctttcgta 25146648  T
Q  101 gaatcgatagaggaatttgt-aaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccac 199  Q
    ||||||||| || || || | |||||||||||||||| | ||||||||||||              | ||||||||| ||||||||| |||||||| ||     
T  25146649 gaatcgatatagaaaattctaaaaatcgcaatcaaaatcgatggattttacc--caaaaaaattgatactaaatatacgttataaattgtatatagtcat 25146746  T
Q  200 aaatgacttagtttataagaaatcgtaaa 228  Q
    |||| ||||||||||||||||||||||||    
T  25146747 aaataacttagtttataagaaatcgtaaa 25146775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 18304645 - 18304840
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnn 153  Q
    ||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||||| |||||||||||||||||||| | |||||||||| |      
T  18304645 gtaaaatcgcattcaaaatcgaaggattttactaaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttatc-- 18304742  T
Q  154 nnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
                | ||||||||| ||||| |||||||||||| || ||||||||||| |||||||||||||| |||||||| ||||||| |||||||||    
T  18304743 aaaaaaaattaatactaaatatacgttatgaatggtatatagtcataaatgacttagcttataagaaatcgt-aaatcgcaatcaaaattgatggattt 18304840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 32881615 - 32881426
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnn 153  Q
    ||||||||||||   |||||||||||||||||||||  || ||||||||||||||| | ||| |||||||||||||||||||| |||||| ||||||       
T  32881615 gtaaaatcgcaactgaaatcgaaggattttactcaactacgtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcaatggcttttac--- 32881519  T
Q  154 nnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
                | |||||||||||||||||||||||||||| ||  ||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  32881518 ------aaaaaatactaaatatatgttataaatggtatatagtcatgaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattt 32881426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 42179852 - 42180095
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||||| ||| |||| |||  ||||||||||||| ||| |  ||| ||||||||||||||||||||||||||||||| || ||||| ||||||    
T  42179852 gtcaaaatcagaaatttacttcgggttaaaagggaatagcataatcgaaactcgtaaaatcgcaatcaaaatcgaaggattttattcgaggacttttgta 42179951  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||        ||||| |||||||| | ||||||||| | ||||||||||||              | ||| |||||||||||||||||||||||| || |    
T  42179952 gat-------aggaaattgtaaaaccacaatcaaaatcgatggattttaccaaaaaaaatataa-tactatatatatgttataaatggtatatagtcata 42180043  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||| |||| || |||||||||||| ||||    
T  42180044 aatgacttagtttataagaaatcgtagaatcacaatcaaaatcgatgtattt 42180095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 23 - 151
Target Start/End: Original strand, 17055722 - 17055850
Alignment:
Q  23 aggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaa 122  Q
    |||||||||||| || | ||||| |||||| ||||||||||||||||||||||||||||||||||||  || ||||||||||||||| | ||| ||||||    
T  17055722 aggtcgaaaggggattgtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcgatacaagaaattgtaa 17055821  T
Q  123 aatcgcaatcaaaaacaatggattttacc 151  Q
    ||| ||||||||||   ||||||||||||    
T  17055822 aattgcaatcaaaatggatggattttacc 17055850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 15 - 253
Target Start/End: Complemental strand, 47786192 - 47785957
Alignment:
Q  15 ttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    ||||||| |||| ||||| ||| |||||||| |  | | |||||||| ||| |||||||||||||||||||||||  || |||||||||| |||| | ||    
T  47786192 ttttctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcacaaccaaaatcgaaggattttactcaactacttttgtagaattgatataaga 47786093  T
Q  115 atttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagttta 214  Q
    | |   ||||||| ||| |||| | ||||||||||||              | |||||||||||||||||||||||||||| || |||||||||||||||    
T  47786092 aatcacaaaatcgaaataaaaatcgatggattttaccacaaaaaataa---tactaaatatatgttataaatggtatatagtcataaatgacttagttta 47785996  T
Q  215 taagaaatcgtaaaatcgcagtcaaaatcgatggatttg 253  Q
    |||||||||||||||| ||| |||||| |||||||||||    
T  47785995 taagaaatcgtaaaattgcaatcaaaaccgatggatttg 47785957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 20 - 245
Target Start/End: Original strand, 17869550 - 17869773
Alignment:
Q  20 ttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttg 119  Q
    |||||||| |||||||| |||||||| |||||  |||||||||||||||||||| ||||||||||||||||||| ||| ||||||| ||  |  || |||    
T  17869550 ttcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttactcaaggacttttatagaatcaatgtaaaaaattg 17869649  T
Q  120 taaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataaga 219  Q
    ||||||||||||||||| | ||| ||||||||              | ||||||||||||| ||||| |||||| |  | ||| ||||||||||| ||||    
T  17869650 taaaatcgcaatcaaaatcgatgaattttacc--aaaaaataataatactaaatatatgttgtaaatagtatatggttataaaagacttagtttaaaaga 17869747  T
Q  220 aatcgtaaaatcgcagtcaaaatcga 245  Q
    ||||||||||| ||| ||||||||||    
T  17869748 aatcgtaaaattgcaatcaaaatcga 17869773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 13276212 - 13276296
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||| ||||||| || |||||||||| |||||||||||||||||||||||| ||||||||||| |||||    
T  13276212 ctaaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgattgattt 13276296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 9327159 - 9327245
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaa--tgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||| ||||||||||||||||| || |||  |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9327159 ctaaatatatattataaatggtatatagtcaaaaaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattt 9327245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 2 - 105
Target Start/End: Original strand, 17197311 - 17197414
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | ||||| ||||| ||||||||||| ||||||||| || ||| ||||||||||||  |||||||||||||||||||||||||| |||||||    
T  17197311 tcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcgcaactaaaatcgaaggattttactcaaggacttttgtag 17197410  T
Q  102 aatc 105  Q
    ||||    
T  17197411 aatc 17197414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 174 - 252
Target Start/End: Complemental strand, 12513458 - 12513380
Alignment:
Q  174 atatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||| ||||||||||| |  ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12513458 atatgttatatatggtatatagtcgtaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattt 12513380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 41032572 - 41032701
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaattt 118  Q
    |||||||| ||||| ||| ||||||||||  | | ||||||||||||  |||||||||| |||||||||||  |  ||||||||||||||| | ||| ||    
T  41032572 cttcaggttgaaagagaagagcaaaattgataatcgtaaaatcgcaactaaaatcgaagaattttactcaactagttttgtagaatcgatataagaaatt 41032671  T
Q  119 gtaaaatcgcaatcaaaaacaatggatttt 148  Q
    ||||||||||||| |||| | |||||||||    
T  41032672 gtaaaatcgcaattaaaatcgatggatttt 41032701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 109
Target Start/End: Original strand, 12002666 - 12002748
Alignment:
Q  25 gtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    ||||||||||| ||||||||||||||||   |||||| |||| |||||||||||||||||||||  ||| |||||||||||||||    
T  12002666 gtcgaaagggagtagcaaaattgggactc--aaaatcacaataaaaatcgaaggattttactcatagacttttgtagaatcgata 12002748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 252
Target Start/End: Complemental strand, 18228380 - 18228300
Alignment:
Q  171 aatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||| || |||| ||||| ||||||||||||| ||||||| || ||||||| |||||||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataagaaatcataaaatc-caatcaaaattgatggattt 18228300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 16434857 - 16434749
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| | ||||||  ||||| ||||||||||||||||| |  | | ||||||| |||||||||||||||||||||||||| |  || ||||||    
T  16434857 gtcaaaatcaggatttttctctaggtcaaaagggaatagcaaaatcgaaaatcgtaaaattgcaatcaaaatcgaaggattttactcgacaacttttgta 16434758  T
Q  101 gaatcgata 109  Q
    |||| ||||    
T  16434757 gaattgata 16434749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 30619275 - 30619156
Alignment:
Q  15 ttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    |||||||||||||||||| ||| |||||||| |  | | || |||||||||  ||||||||||||||||||||||  || |||||||||||||||    |    
T  30619275 ttttcttcaggtcgaaagagaagagcaaaatcgacaatcgt-aaatcgcaacaaaaatcgaaggattttactcaactacttttgtagaatcgatatgaaa 30619177  T
Q  115 atttgtaaaatcgcaatcaaa 135  Q
    | |||||||||||||||||||    
T  30619176 aattgtaaaatcgcaatcaaa 30619156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 35 - 94
Target Start/End: Original strand, 9321550 - 9321609
Alignment:
Q  35 aatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggaca 94  Q
    ||||||||||| || ||| |||||||||||||||||||||||||||||||  ||||||||    
T  9321550 aatagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttatccaaggaca 9321609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 109
Target Start/End: Complemental strand, 8773589 - 8773508
Alignment:
Q  25 gtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    ||||||||||||||||| |||   |||| ||||||||||||| ||||| ||||||||||||| |||||  |||||||||| ||||    
T  8773589 gtcgaaagggaatagcagaat---gactcgtaaaatcgcaattaaaattgaaggattttacttaaggatttttgtagaattgata 8773508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 89
Target Start/End: Complemental strand, 12513601 - 12513531
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaa 89  Q
    ||||||||| |||| ||| |||||||| |  | |||||||||||||| ||||||| |||||||||||||||    
T  12513601 cttcaggtcaaaagagaagagcaaaatcgacaattgtaaaatcgcaaccaaaatcaaaggattttactcaa 12513531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 109
Target Start/End: Complemental strand, 22789513 - 22789423
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    ||||||||| ||||||| ||| ||||| |  | | |||||||| ||||||||||| |||||||||||| | |||| |||||||| ||||||    
T  22789513 cttcaggtcaaaagggattagaaaaatcgcaaatcgtaaaatcacaatcaaaatcaaaggattttactaatggacttttgtagactcgata 22789423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 64 - 136
Target Start/End: Original strand, 13276112 - 13276182
Alignment:
Q  64 aatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaa 136  Q
    ||||||||||||||||  ||||| |||||  ||||||||||||||| | ||| ||||||||| ||||||||||    
T  13276112 aatcaaaatcgaagga--ttacttaaggaattttgtagaatcgatataagaaattgtaaaattgcaatcaaaa 13276182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 27502169 - 27502225
Alignment:
Q  34 gaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaag 90  Q
    |||||||||||  | ||||  |||||| |||||||||||||||||||||||||||||    
T  27502169 gaatagcaaaaccgagactcataaaattgcaatcaaaatcgaaggattttactcaag 27502225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 34 - 73
Target Start/End: Original strand, 12002751 - 12002790
Alignment:
Q  34 gaatagcaaaattgggacttgtaaaatcgcaatcaaaatc 73  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  12002751 gaatagcaaaatcgggactcgtaaaatcgcaatcaaaatc 12002790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 13100431 - 13100392
Alignment:
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||| |||||||||| |||||||||||||||||    
T  13100431 tataagaaatcttaaaatcgcaatcaaaatcgatggattt 13100392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 17055995 - 17056029
Alignment:
Q  218 gaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||| |||||||||||||||||    
T  17055995 gaaatcgtaaaatcgcaatcaaaatcgatggattt 17056029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 9954777 - 9954821
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaat 45  Q
    ||||||||| | ||||| ||| |||||||||||||||||||||||    
T  9954777 gtcaaaatcgggactttacttaaggtcgaaagggaatagcaaaat 9954821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Original strand, 17056001 - 17056033
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttact 86  Q
    |||||||||||||||||||||| ||||||||||    
T  17056001 gtaaaatcgcaatcaaaatcgatggattttact 17056033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 18304708 - 18304740
Alignment:
Q  52 ttgtaaaatcgcaatcaaaatcgaaggatttta 84  Q
    |||||||||||||||||||||||| ||||||||    
T  18304708 ttgtaaaatcgcaatcaaaatcgatggatttta 18304740  T

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Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 18844063 - 18843814
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||||||||||| || ||||||||||||||| ||||||    
T  18844063 gtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcggagtattttactcaaggacttttgta 18843964  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||| ||| ||||| |||||||||||||||||||| | ||||||||||||              | |||||||||||||||||||||||||||  || |    
T  18843963 gaatccatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc--caaaaaaattaatactaaatatatgttataaatggtatataatcata 18843866  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||| ||| ||| |||||||||||| ||||    
T  18843865 aatgacttagtttataagaaatcgtataattgcaatcaaaatcgatgaattt 18843814  T

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Target: chr5; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 19579292 - 19579041
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaata-gcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgt 99  Q
    ||||||||| | | ||| ||||||||||||||||| || ||||||||||||||  |||||||||||||||||||||||||||| |||||||||| |||||    
T  19579292 gtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcgcaatcaaaatcgaaggatttcactcaaggacttttgt 19579193  T
Q  100 agaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccac 199  Q
    ||||||| || || || |||||||||||||||||||| | ||||||||||||              | | ||||||||||||| ||||||| |||| ||     
T  19579192 agaatcgttatagaaaattgtaaaatcgcaatcaaaatcgatggattttacc-aaaaaaaaaataataccaaatatatgttatgaatggtaaatagtcat 19579094  T
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  19579093 aaatgacttagtttataagaaatcgtaaagtcgcaatcaaaatcgatggattt 19579041  T

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Target: chr5; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 41688447 - 41688695
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| ||| ||| ||||||||||||||||||| ||||||  ||||||||||| |||||||||||||||||||| |||||| ||||||    
T  41688447 gtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttacttaaggacttttgta 41688546  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| || || |||||||||||||||||||| | ||| ||||||||              | ||||||||||||||| ||||||||||||  | |    
T  41688547 gaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttacc---aaaaaaaataatactaaatatatgttatgaatggtatatagttata 41688643  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||| |||||||||||||||||||||||||||| |||||||||||| ||||    
T  41688644 aatgatttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattt 41688695  T

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Target: chr5; HSP #4
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 18051314 - 18051560
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | | ||| ||| ||||||||||||||||| ||||| |||||||||| |||||||||||||||| ||| |||||| | |||||| ||||||    
T  18051314 gtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcgcaatcaaaatcaaagaattttattgaaggacttttgta 18051413  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| ||||| |||||||||||||| ||||| | |||||||| |||              | |||||||||||||||||||  ||||| | || |    
T  18051414 gaatcgatataggaaattgtaaaatcgcaagcaaaatcgatggatttaacc--aaaaaataataatactaaatatatgttataaat--tatat-gtcata 18051508  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  18051509 aatgacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattt 18051560  T

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Target: chr5; HSP #5
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 27 - 252
Target Start/End: Complemental strand, 43235190 - 43234967
Alignment:
Q  27 cgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatc 126  Q
    |||||||||||||||||||  | |||  |||||||||||||||||||||||||||||||||||| || ||||||||||||||| |  || ||||||||||    
T  43235190 cgaaagggaatagcaaaatcagtactcataaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataaaaaattgtaaaatc 43235091  T
Q  127 gcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgta 226  Q
    |||||||||| | || |||||||||              |  ||| ||||||||||||||||| ||||| || ||||||||||||| |||||||||||||    
T  43235090 gcaatcaaaatcgattgattttacc--aaaagataataatagtaagtatatgttataaatggtttatagacataaatgacttagttgataagaaatcgta 43234993  T
Q  227 aaatcgcagtcaaaatcgatggattt 252  Q
    ||||| || |||||||||||||||||    
T  43234992 aaatcacaatcaaaatcgatggattt 43234967  T

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Target: chr5; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 13 - 240
Target Start/End: Complemental strand, 20321279 - 20321054
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||||||| ||| ||||||| ||||| ||||||  |||||||||||||||||| ||||||||||||| |||||| ||||||||||| ||| ||    
T  20321279 actttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactgaaggacttttgtagaatctatatag 20321180  T
Q  113 gaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtt 212  Q
    ||| |||||||||||||||||||| | ||||||||||||               | ||||||||||||||||||| ||||| | || |||||||||||||    
T  20321179 gaaattgtaaaatcgcaatcaaaatcgatggattttacccagaaaaaattaatat-taaatatatgttataaatgatatatggtcataaatgacttagtt 20321081  T
Q  213 tataagaaatcgtaaaatcgcagtcaaa 240  Q
    |||||| ||||||||||||||| |||||    
T  20321080 tataag-aatcgtaaaatcgcaatcaaa 20321054  T

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Target: chr5; HSP #7
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 57 - 246
Target Start/End: Original strand, 23172265 - 23172452
Alignment:
Q  57 aaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnn 156  Q
    |||||| |||||||||||||| ||||||||||| ||| ||||||||||||||| ||||| |||||||||||||||||||| | ||| ||||||||         
T  23172265 aaatcgtaatcaaaatcgaagaattttactcaaagacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaaa 23172364  T
Q  157 nnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgat 246  Q
             |  ||||||||||||| ||||||||||||| || |||||||||||||||||| |||||||||||||||  |||||||||||    
T  23172365 aaattaatat--taaatatatgttacaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcgatcaaaatcgat 23172452  T

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Target: chr5; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 19042209 - 19042343
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||| ||||| ||||| ||  ||||||||||| ||||||||||| |||||| |||||||| |||| |||||||||| |||||||| |||||| ||||||    
T  19042209 gtcaatatcaggactttgctctaggtcgaaaggaaatagcaaaatagggactcgtaaaatcacaattaaaatcgaagaattttacttaaggacttttgta 19042308  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaa 135  Q
    ||||||||| ||||| |||||||||||||||||||    
T  19042309 gaatcgatataggaaattgtaaaatcgcaatcaaa 19042343  T

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Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 19979781 - 19979698
Alignment:
Q  169 taaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  19979781 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattt 19979698  T

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Target: chr5; HSP #10
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 104
Target Start/End: Original strand, 15051879 - 15051981
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | ||||| ||||| ||||||| ||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  15051879 tcaaaatcgggactttacttcaagtcgaaaaggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 15051978  T
Q  102 aat 104  Q
    |||    
T  15051979 aat 15051981  T

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Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 27339968 - 27340216
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| ||||||| ||||| || |||||||||||||||||| |  | | || |||||||||||||||||||||||||||||||| |||| ||||||    
T  27339968 gtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatcgaaaatcgtgaaatcgcaatcaaaatcgaaggattttactcacggacttttgta 27340067  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnntt-ctaaatatatgttataaatggtatatagccac 199  Q
    |||| |||| | ||| |  ||||||||||||||||| | || ||||||||                | |||||||||||||| |||||||||||||        
T  27340068 gaattgatataagaaatattaaaatcgcaatcaaaatcgatagattttacaaaaaaataataataatactaaatatatgttacaaatggtatatagt--- 27340164  T
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
     ||||||||||||||||||||||  ||||||| || |||||||||||| ||||    
T  27340165 -aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattt 27340216  T

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Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 41427743 - 41427654
Alignment:
Q  25 gtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    ||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||    
T  41427743 gtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcgaggacttttgtagaatcgatatagga 41427654  T

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Target: chr5; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 21059102 - 21059186
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||| ||||| || ||||||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  21059102 ctaaatatatgttataaatggtttatagtcataaatgacttcgtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattt 21059186  T

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Target: chr5; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 22645508 - 22645596
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaa 89  Q
    |||||| || ||||||| |||| |||| ||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||    
T  22645508 gtcaaagtcggaactttacttctggtctaaagggaatagcaaaattgagactcgtaaaattgcaatcaaaatcgaaggattttactcaa 22645596  T

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Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 19377951 - 19377843
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    |||||| |||| ||||| ||| | || |||||||||||||||||| | || | ||||| |  ||||||||||||||||||||||||||||||| ||||||    
T  19377951 gtcaaagtcagtactttactttaagtggaaagggaatagcaaaatcgagaatcgtaaatttacaatcaaaatcgaaggattttactcaaggacttttgta 19377852  T
Q  101 gaatcgata 109  Q
    |||||||||    
T  19377851 gaatcgata 19377843  T

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Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 52 - 151
Target Start/End: Original strand, 43005691 - 43005790
Alignment:
Q  52 ttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||||||||||||||| ||| ||||||||||||   | ||||||||||||||| ||||| | ||||||||||||| |||| | ||||||| ||||    
T  43005691 ttgtaaaatcgcaatcaaaattgaaagattttactcaacttcttttgtagaatcgatataggaaatcgtaaaatcgcaattaaaatcgatggattgtacc 43005790  T

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Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 114
Target Start/End: Original strand, 22984643 - 22984695
Alignment:
Q  62 gcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||| ||||    
T  22984643 gcaatcaaaatcgaaggattttactcaaggaattttgtagaatcgatatagga 22984695  T

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Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6852347 - 6852417
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaa 71  Q
    ||||||||| | ||||  ||||||||||||||||||||||||||| ||||||  |||||| ||||||||||    
T  6852347 gtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatcgggactcataaaattgcaatcaaaa 6852417  T

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Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 57 - 151
Target Start/End: Original strand, 38158101 - 38158195
Alignment:
Q  57 aaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| |||||||||||||||||||||||  |  ||||||||||| ||  | ||| |||||||||| |||||||||   ||||||||||||    
T  38158101 aaatcgcaaccaaaatcgaaggattttactcaactatttttgtagaatctatgtaagaaattgtaaaatcacaatcaaaattgatggattttacc 38158195  T

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Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 185 - 249
Target Start/End: Original strand, 22645681 - 22645746
Alignment:
Q  185 atggtatatagccacaaatgac-ttagtttataagaaatcgtaaaatcgcagtcaaaatcgatgga 249  Q
    ||||||||||| || ||||||| |||||||||||||||| ||||||||||| ||||||| ||||||    
T  22645681 atggtatatagtcataaatgacattagtttataagaaattgtaaaatcgcaatcaaaatagatgga 22645746  T

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Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 254
Target Start/End: Original strand, 19042406 - 19042450
Alignment:
Q  210 gtttataagaaatcgtaaaatcgcagtcaaaatcgatggatttga 254  Q
    ||||||||||||||||||||||||| ||||||||||| |||||||    
T  19042406 gtttataagaaatcgtaaaatcgcaatcaaaatcgatagatttga 19042450  T

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Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 23 - 105
Target Start/End: Complemental strand, 24648335 - 24648253
Alignment:
Q  23 aggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatc 105  Q
    |||||||||||||| || ||||| |  | | ||||||||| |||||||||| |||||||||||||||  || |||||||||||    
T  24648335 aggtcgaaagggaagagtaaaatcgaaaatcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatc 24648253  T

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Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 150
Target Start/End: Original strand, 21058990 - 21059087
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggatttt-actcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttac 150  Q
    |||||||||||| |||||||||| |||||| ||| ||  || ||||||||||  ||| | ||| || ||||||||||||||||| | |||||||||||    
T  21058990 gtaaaatcgcaaccaaaatcgaaagatttttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcgatggattttac 21059087  T

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Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Original strand, 38158221 - 38158284
Alignment:
Q  189 tatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||| || |||||| ||||||||||||||||||||||||  ||  ||||||| ||||||||    
T  38158221 tatatagtcataaatgatttagtttataagaaatcgtaaaataacaaccaaaatcaatggattt 38158284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 2 - 252
Target Start/End: Complemental strand, 8788 - 8542
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | ||||| |||||||||||||||||||| |||||| || ||| ||||||||||||||||||| ||||||||||||||||| |  || ||||    
T  8788 tcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttactcaagtattttcgtag 8689  T
Q  102 aatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaa 201  Q
    |||||||| ||||| |||||||||||||||||||| | ||||||||||||              | ||||||||||| |||||||||||||||| || ||    
T  8688 aatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc----aaaaaaataatactaaatatatggtataaatggtatatagtcataa 8593  T
Q  202 atgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  8592 atgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattt 8542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 115; Significance: 2e-58; HSPs: 48)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 24619978 - 24620230
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| ||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  24619978 gtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaagacttttgta 24620077  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc-nnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccac 199  Q
    ||||||||| || || ||||||||||||||||||||    |||||||||||               | |||||||||| ||||||||||||||||  ||     
T  24620078 gaatcgatatagaaaattgtaaaatcgcaatcaaaattgttggattttaccaaaaaaaaataaaaatactaaatatattttataaatggtatataatcat 24620177  T
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||||||| ||| | |||||||||| ||||    
T  24620178 aaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaattt 24620230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 28746112 - 28745869
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||||||||||||  ||||||||||| |||||| |||||||||||||||||||||||| |||||||||||| || ||||||||||||||| ||    
T  28746112 actttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttactcaagaacttttgtagaatcgatatag 28746013  T
Q  113 gaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagt- 211  Q
    ||| |||||||||||||||||||| | ||||||||||||              |  |||||||||||||||||| |||||||| || ||||||||||||     
T  28746012 gaaattgtaaaatcgcaatcaaaatcgatggattttacc--caaaaaaattaatagtaaatatatgttataaatagtatatagtcataaatgacttagtt 28745915  T
Q  212 -----ttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
         ||||||||||||||||||||||| |||||||||||| ||||    
T  28745914 tataattataagaaatcgtaaaatcgcaatcaaaatcgatgaattt 28745869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 249
Target Start/End: Complemental strand, 39428255 - 39428004
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaat----cgaaggattttactcaaggacatt 96  Q
    ||||||||| | ||||| |||  ||| |||||||||||||||||| ||||||  ||||||||||||||||||    ||||||||||||||||| ||  ||    
T  39428255 gtcaaaatcgggactttacttgcggttgaaagggaatagcaaaatcgggactcataaaatcgcaatcaaaataaatcgaaggattttactcaaagatttt 39428156  T
Q  97 tgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagc 196  Q
    ||| ||||||||| ||||| |||||||||||||||||||| | ||||||||||||              | ||||||||||||||||| | ||||||||     
T  39428155 tgtggaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc-caaaaaaaattaatactaaatatatgttataagtagtatatagt 39428057  T
Q  197 cacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatgga 249  Q
    || ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  39428056 cataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgga 39428004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 29067624 - 29067383
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| ||||||| |||||||||||| |||||||||||||| || |||  ||||||| |||||||| |||||||||||||||||||||  ||||||    
T  29067624 gtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatctcaatcaaa-tcgaaggattttactcaaggatttttgta 29067526  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    |||| ||||  |||| |||||||||||||||||||| | ||||||||||||                ||||||||         ||||||||||| || |    
T  29067525 gaattgatattggaagttgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaaattaacactaaatat---------atggtatatagtcata 29067435  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  29067434 aatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattt 29067383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 42697195 - 42696946
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| | ||| |||||||||||| | ||| || ||||| |  | ||||||||||||||  ||||| ||||||||||| ||||  || ||||||    
T  42697195 gtcaaaatcaggattttgcttcaggtcgaatgagaagag-aaaatcgacaattgtaaaatcgcaactaaaattgaaggattttattcaactacttttgta 42697097  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| | ||| |  |||| |||||||||||| | ||||||||||||              | | |||||||||||||||||||||||||| || |    
T  42697096 gaatcgatataagaaatcataaactcgcaatcaaaatcgatggattttaccaaaaaaaaaaaaa-taccaaatatatgttataaatggtatatagtcata 42696998  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  42696997 aatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattt 42696946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 40 - 151
Target Start/End: Complemental strand, 20756331 - 20756220
Alignment:
Q  40 caaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaaca 139  Q
    |||||| |||||| ||||||||||||||||||| ||| |||||||||||||||  ||||||||||||||| ||||| |||||||||||||||||||| |     
T  20756331 caaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcg 20756232  T
Q  140 atggattttacc 151  Q
    ||||||||||||    
T  20756231 atggattttacc 20756220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 13 - 114
Target Start/End: Original strand, 8592192 - 8592293
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||| ||||||||| ||||||||||| | |||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  8592192 actttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatatag 8592291  T
Q  113 ga 114  Q
    ||    
T  8592292 ga 8592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 2 - 151
Target Start/End: Original strand, 22355848 - 22355993
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| ||||||| | ||||||||||| ||||||||||||| |||||| |||||||||||||||||||| || ||||||| |||||||| ||||||     
T  22355848 tcaaaatcggaactttacatcaggtcgaaatggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaagattttattcaaggacttttgtaa 22355947  T
Q  102 aatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||    || |||||||| ||||| ||||| | ||||||||||||    
T  22355948 aatcgata----aaattgtaaaaccgcaaacaaaatcgatggattttacc 22355993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 8155910 - 8156160
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    |||||||| |||| ||| |||||||| | ||| ||| |||||||| |  | |  |||||||||||  || |||||||||||||||||||  || ||||||    
T  8155910 gtcaaaattagaattttgcttcaggtggtaagagaagagcaaaatggacaatcataaaatcgcaactaagatcgaaggattttactcaactacttttgta 8156009  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    | || |||| | |||  ||||||||||||||||| | |  |||||||||||              | ||||||||||||||||||||||||||||  | |    
T  8156010 gcattgatataagaaactgtaaaatcgcaatcaatatcg-tggattttaccaaaaataataataatactaaatatatgttataaatggtatatagttata 8156108  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||||||||    
T  8156109 aataacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattt 8156160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 3041570 - 3041464
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | | ||| ||||| ||||||| ||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  3041570 tcaaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 3041471  T
Q  102 aatcgat 108  Q
    || ||||    
T  3041470 aaacgat 3041464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 151
Target Start/End: Complemental strand, 27676781 - 27676634
Alignment:
Q  4 aaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaa 103  Q
    |||||||| | ||| ||||| |||||||||||| |||||||| |  | |  |||||||||||||||||||||| ||||||||||||  || |||||| ||    
T  27676781 aaaatcaggattttgcttcaagtcgaaagggaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttactcaactacttttgtaaaa 27676682  T
Q  104 tcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    |||||| | ||| | |||||||| ||||||||| ||||||||||||||    
T  27676681 tcgatataagaaatcgtaaaatcacaatcaaaatcaatggattttacc 27676634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 168 - 245
Target Start/End: Original strand, 15515202 - 15515279
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcga 245  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||| ||| ||||||||    
T  15515202 ctaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtgaaatcgaagttaaaatcga 15515279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 54 - 151
Target Start/End: Complemental strand, 17064602 - 17064505
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||||||||||||||||||||||||||||||  || ||||||||||| ||| | ||| ||||||||| |||||||||| | ||||||||||||    
T  17064602 gtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataagaaattgtaaaattgcaatcaaaatcgatggattttacc 17064505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 2 - 114
Target Start/End: Complemental strand, 18014338 - 18014226
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | ||||| ||||| ||  ||| ||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||     
T  18014338 tcaaaatcgggactttacttcaagttaaaatggagtagcaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttataa 18014239  T
Q  102 aatcgatagagga 114  Q
    || ||||| ||||    
T  18014238 aaccgatatagga 18014226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 37 - 104
Target Start/End: Complemental strand, 22971121 - 22971054
Alignment:
Q  37 tagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaat 104  Q
    ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  22971121 tagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 22971054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 13286292 - 13286142
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    |||||||||| || ||| |||||||||| ||||||| || |||||    ||| |||||||||||||||||||| || ||||||||||||  || ||||||    
T  13286292 gtcaaaatcacaattttgcttcaggtcggaagggaagagaaaaatcaaaactcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgta 13286193  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| | ||| | |||||||| |||| |||| | ||||||||||||    
T  13286192 gaatcgatataagaaatcgtaaaatcacaatgaaaatcgatggattttacc 13286142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 25870156 - 25870253
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    |||||||||||| ||||||| |||||||||||||||  |  ||||||||||||||| | ||| |||||||||||||||||||| | ||||||||||||    
T  25870156 gtaaaatcgcaaccaaaatcaaaggattttactcaactaagtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttacc 25870253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 8560239 - 8560351
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | ||||| ||||| ||| ||||||| ||||||||| | |||| || |||||||||||||||||||||||||||||||||||   |||||||    
T  8560239 tcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcgcaatcaaaatcgaaggattttactcaaggttttttgtag 8560338  T
Q  102 aatcgatagagga 114  Q
    |||| ||| ||||    
T  8560339 aatcaatatagga 8560351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 20766682 - 20766790
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| |||||  ||||||| || ||||||||| | |||| |||||||||||||||||||||||  ||||||||||||| | |||| |    
T  20766682 gtcaaaatcgggactttacttcaactcgaaagagagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaaaattttactcaagggcttttgga 20766781  T
Q  101 gaatcgata 109  Q
    |||||||||    
T  20766782 gaatcgata 20766790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 114
Target Start/End: Complemental strand, 27090768 - 27090677
Alignment:
Q  23 aggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    ||||||||||||||||| |||||||  | | |||| |||||||| |||||||||||||||||||||||||  |||||| |||||||| ||||    
T  27090768 aggtcgaaagggaatagaaaaattgcaaatcgtaagatcgcaataaaaatcgaaggattttactcaaggaattttgtataatcgatatagga 27090677  T

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Target: chr3; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 6136350 - 6136500
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    |||||||||| || ||| |||||  ||| ||||||| ||||||||    | | |||||||||||||||||||| || ||||||||||||  || ||| ||    
T  6136350 gtcaaaatcacaattttgcttcatatcggaagggaaaagcaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttata 6136449  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| | ||| | |||||||| ||||||||| | ||||||||||||    
T  6136450 gaatcgatataagaaatcgtaaaatcacaatcaaaatcgatggattttacc 6136500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 3449144 - 3449241
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    |||||||||||| |||||||||| ||||||| ||||  || ||||||||||||||| | |||  |||||||||||||||||||   ||||||||||||    
T  3449144 gtaaaatcgcaaccaaaatcgaatgattttattcaactacttttgtagaatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttacc 3449241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 19348889 - 19348788
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||| ||| ||||||| ||||||||| | |||| ||||||||||||||||||| ||||||||||| | |||||| ||| || |||||||| ||    
T  19348889 actttacttcaagtcaaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatggaaggattttattgaaggacttttataaaatcgatatag 19348790  T
Q  113 ga 114  Q
    ||    
T  19348789 ga 19348788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41671527 - 41671426
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | | ||| |||||||||||||| ||| |||||||| |  | |||||||||||||| |||||||||||||||||||||||  || ||||||    
T  41671527 gtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgta 41671428  T
Q  101 ga 102  Q
    ||    
T  41671427 ga 41671426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 17064483 - 17064420
Alignment:
Q  189 tatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||| || ||||||||||||||||||||||||||||||||||| | |||||||||| ||||    
T  17064483 tatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaattt 17064420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 9169942 - 9169869
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcga 75  Q
    |||||||| ||||||| ||||| ||||||||| | |||||||||||||||  ||||||| ||||||||||||||    
T  9169942 tcaaaatcggaactttacttcaagtcgaaaggaagtagcaaaattgggacccgtaaaattgcaatcaaaatcga 9169869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 151
Target Start/End: Complemental strand, 28136057 - 28135960
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    |||||||||| |||||||||||||||||||||||||  || |||||| ||| |||| | ||| ||||||||| | |||||||| ||||  ||||||||    
T  28136057 gtaaaatcgctatcaaaatcgaaggattttactcaactacttttgtaaaattgatataagaaattgtaaaataggaatcaaaatcaatatattttacc 28135960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Complemental strand, 20756190 - 20756138
Alignment:
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  20756190 aaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgattgattt 20756138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 22137459 - 22137377
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||| ||||||||| |||||||| || ||||||||||||  ||||||||||| ||||||||| | |||||||||||||||    
T  22137459 ctaaatata-gttataaatagtatatagtcataaatgacttagtaaataagaaatcg-aaaatcgcaattaaaatcgatggattt 22137377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 22356030 - 22356082
Alignment:
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||||||||||| |||||||  ||||||||    
T  22356030 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggattt 22356082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 197 - 252
Target Start/End: Original strand, 3449267 - 3449322
Alignment:
Q  197 cacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||| |||||||||||||||||||||||| | |||||| ||||||||    
T  3449267 cacaaatgacttactttataagaaatcgtaaaatcgcaataaaaatctatggattt 3449322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 85
Target Start/End: Complemental strand, 13006151 - 13006089
Alignment:
Q  23 aggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttac 85  Q
    |||||||||||||||||||||||||  | | ||||||||||||||||||| ||| ||||||||    
T  13006151 aggtcgaaagggaatagcaaaattgaaaatcgtaaaatcgcaatcaaaattgaatgattttac 13006089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 22494734 - 22494811
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||| || || |||||||||||       |||||||||||||| |||||||||||| ||||    
T  22494734 ctaaatatatgttataaatggtatatagtcataactgacttagttt-------atcgtaaaatcgcaatcaaaatcgatgaattt 22494811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 13 - 59
Target Start/End: Original strand, 24649542 - 24649588
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaa 59  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||    
T  24649542 actttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaa 24649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 21553677 - 21553786
Alignment:
Q  4 aaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaagg-attttactcaaggacatttgtaga 102  Q
    |||||| | ||||| |||||  |||||||||| ||| ||||| |||||| ||||  |||||||||||||||||||  ||||| |||||||| ||||||||    
T  21553677 aaaatcgggactttacttcaaatcgaaagggagtagaaaaatcgggactggtaa--tcgcaatcaaaatcgaaggttttttattcaaggacttttgtaga 21553774  T
Q  103 atcgatagagga 114  Q
    || |||| ||||    
T  21553775 attgatatagga 21553786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 19 - 75
Target Start/End: Original strand, 30727658 - 30727714
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcga 75  Q
    |||||||| |||||||||||||||||| | ||||  |||||||||||||||||||||    
T  30727658 cttcaggttgaaagggaatagcaaaatcgagactcctaaaatcgcaatcaaaatcga 30727714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 10872496 - 10872646
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| | ||| ||||||||| |||||||| || |||||    | |  |||||||||||||||||| ||||||||||||| ||  || |||| |    
T  10872496 gtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttactaaactacttttgaa 10872595  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| | ||| | ||||||||  ||| ||||   ||||||||||||    
T  10872596 gaatcgatataagaaatcgtaaaatcagaataaaaattgatggattttacc 10872646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 20 - 150
Target Start/End: Complemental strand, 22137606 - 22137476
Alignment:
Q  20 ttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttg 119  Q
    ||||||||||||| ||| ||||||||  | | | |||||||| ||| ||||||| ||| |||||||||||  || ||||||||||||||| | ||| | |    
T  22137606 ttcaggtcgaaagagaagagcaaaatcagcaatagtaaaatcacaaccaaaatcaaagaattttactcaactacttttgtagaatcgatataagaaatcg 22137507  T
Q  120 taaaatcgcaatcaaaaacaatggattttac 150  Q
    ||||| |  ||||||||   |||||||||||    
T  22137506 taaaaccaaaatcaaaattgatggattttac 22137476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 17796894 - 17796805
Alignment:
Q  20 ttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    ||||||||||||||||| || |||||    | | ||||||| ||||| |||||||||| |||||||||||  || |||||||||||||||    
T  17796894 ttcaggtcgaaagggaaaagaaaaataaaaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcgata 17796805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 20 - 109
Target Start/End: Complemental strand, 19105334 - 19105245
Alignment:
Q  20 ttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    ||||||||||||||||| || |||||    | | ||||||| ||||| |||||||||| |||||||||||  || |||||||||||||||    
T  19105334 ttcaggtcgaaagggaaaagaaaaataaaaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcgata 19105245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 27055441 - 27055328
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| ||| ||| ||||||||  ||||| ||||| ||||| |  | | ||||||||||||| ||||| ||| | ||||||| ||  |||||||||    
T  27055441 gtcaaaatcggaattttacttcaggtaaaaaggaaatagtaaaatcgcaaatcgtaaaatcgcaattaaaattgaaaggttttactaaaaaacatttgta 27055342  T
Q  101 gaatcgatagagga 114  Q
    ||||||||| ||||    
T  27055341 gaatcgatacagga 27055328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 6136457 - 6136496
Alignment:
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||| || |||||||||||||||||    
T  6136457 tataagaaatcgtaaaatcacaatcaaaatcgatggattt 6136496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 21963590 - 21963528
Alignment:
Q  189 tatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||| || ||||||||||||  ||||||||||| ||||||||  |||||||||||||||||    
T  21963590 tatatagtcataaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggattt 21963528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 189 - 252
Target Start/End: Complemental strand, 21986026 - 21985964
Alignment:
Q  189 tatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||| || ||||||||||||  ||||||||||| ||||||||  |||||||||||||||||    
T  21986026 tatatagtcataaatgacttagtaaataagaaatcg-aaaatcgctatcaaaatcgatggattt 21985964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 25870210 - 25870249
Alignment:
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  25870210 tataagaaattgtaaaatcgcaatcaaaatcgatggattt 25870249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 205 - 243
Target Start/End: Original strand, 25870350 - 25870388
Alignment:
Q  205 acttagtttataagaaatcgtaaaatcgcagtcaaaatc 243  Q
    ||||| |||||||||||||||||||||||| ||||||||    
T  25870350 acttaatttataagaaatcgtaaaatcgcaatcaaaatc 25870388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 9152819 - 9152915
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| || |||||||||| ||||| ||||||  |  ||||||||||||||  | ||| |||||||||| ||||||||| | || |||||||||    
T  9152819 gtaaaatcgtaaccaaaatcgaaagatttgactcaactatttttgtagaatcgat-tatgaaattgtaaaatcacaatcaaaatcgatagattttacc 9152915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 85
Target Start/End: Original strand, 25870219 - 25870252
Alignment:
Q  52 ttgtaaaatcgcaatcaaaatcgaaggattttac 85  Q
    |||||||||||||||||||||||| |||||||||    
T  25870219 ttgtaaaatcgcaatcaaaatcgatggattttac 25870252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 7e-58; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 17811696 - 17811446
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| ||||||||| ||||||||||||||||| |||| | ||||||||||||||||||||||| |||||||||||||||| ||||||    
T  17811696 gtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttgta 17811597  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| || || |||||||||||||||||||| | ||||||||||||               | ||||||||| ||||||||||||||||   | |    
T  17811596 gaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaatattaatat-taaatatattttataaatggtatataattata 17811498  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  17811497 aatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatcgattt 17811446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 20 - 252
Target Start/End: Original strand, 24725272 - 24725507
Alignment:
Q  20 ttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttg 119  Q
    ||||||| |||||| |||||||| ||||| |||| ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| ||||| |||    
T  24725272 ttcaggttgaaaggaaatagcaatattggaacttttaaaatcgcaatcaaaatcaaaggattttactcaaggacttttgtagaatcgatataggaaattg 24725371  T
Q  120 taaaatcgcaatcaaaaacaatggattttacc---nnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttata 216  Q
    ||||||||||||||||| | ||||||||||||                 | |||||||||||||||||||||||||||| || |||||||||||||||||    
T  24725372 taaaatcgcaatcaaaatcgatggattttacccaaaaaaaataaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtttata 24725471  T
Q  217 agaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||| |||||| | ||||||| |||||||||    
T  24725472 agaaatcgtcaaatcgtaatcaaaattgatggattt 24725507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 20570666 - 20570915
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||| | |||||||| ||||||||||| |||||||| ||||  |||||||||||||||||| ||| |||||||||||||||| ||||||    
T  20570666 gtcaaaatcgggactctacttcaggttgaaagggaataacaaaattgagactcataaaatcgcaatcaaaattgaaagattttactcaaggacttttgta 20570765  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| | ||| || ||||||| ||||||||| | ||||| ||||||              | |||||||||||||||||||||||||||| || |    
T  20570766 gaatcgatataagaaattataaaatcacaatcaaaatcgatggactttacc--aaaaaagaataatactaaatatatgttataaatggtatatagtcata 20570863  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||| |||||||||||||||||||| ||| |||||||||||||||||    
T  20570864 aatgacttattttataagaaatcgtaaaattgcaatcaaaatcgatggattt 20570915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 44944626 - 44944875
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| |||||| |||||||| |||||||||   |||||| ||||||||||||| |||||||||  |||||||| |||||| ||||||    
T  44944626 gtcaaaatcgggactttacttcagatcgaaaggaaatagcaaatgcgggactcgtaaaatcgcaattaaaatcgaacaattttacttaaggacttttgta 44944725  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| | ||| |||||||||||||||||||| | || || ||||||              | |||||||||||||||||||||||||||| || |    
T  44944726 gaatcgatataagaaattgtaaaatcgcaatcaaaatcgatagactttacc--aaaaaataataatactaaatatatgttataaatggtatatagtcata 44944823  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||| |||||||| || |||||||||||||||||    
T  44944824 aatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatggattt 44944875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 25 - 252
Target Start/End: Complemental strand, 5715609 - 5715388
Alignment:
Q  25 gtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaa 124  Q
    ||||||||| ||||| ||||| |||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||| || |||||    
T  5715609 gtcgaaaggaaatagaaaaatcgggactcgtaaaatcgcaatcaaaatcgagggattttactcaaggacttttgtagaatcgatataggaaattataaaa 5715510  T
Q  125 tcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcg 224  Q
    |||||||||||| | ||| ||||||||                 | ||||||||||||||||||||||||  || |||||||||||||||||||||||||    
T  5715509 tcgcaatcaaaatcgatgaattttaccaaaaaaaaaaa------tgaatatatgttataaatggtatataatcataaatgacttagtttataagaaatcg 5715416  T
Q  225 taaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||| || |||||||||||| ||||    
T  5715415 taaaatcacaatcaaaatcgatgaattt 5715388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 4247692 - 4247455
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||| ||||||||||||||  |||||||||| | ||||||||||||||||| || ||||||||||||||||||  ||||||||||||||| |     
T  4247692 actttacttcaagtcgaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcaaaggattttactcaaggatttttgtagaatcgatataa 4247593  T
Q  113 gaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtt 212  Q
    ||| |  ||||||||||||||||| | ||||||||||||              | |||||||||||||| ||||| ||||||| || |||||||||||||    
T  4247592 gaaatcataaaatcgcaatcaaaatcgatggattttacc--taaaaaaaataatactaaatatatgttacaaatgatatatagtcataaatgacttagtt 4247495  T
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||| |||||||||| |||||||||||| ||||    
T  4247494 tataagaaatcataaaatcgcaatcaaaatcgatgaattt 4247455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 5058876 - 5058636
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| |||||| || ||||||||||||||||| || | | ||||||| ||||||||||||||||||||||| |||||||  |||||     
T  5058876 gtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggattttaatcaaggaattttgt- 5058778  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| |  || |||||||||||||||||||| | ||||| ||||||              | |||||||||||||||||||||||||||| || |    
T  5058777 gaatcgatataaaaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataa--tactaaatatatgttataaatggtatatagtcata 5058680  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcg 244  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  5058679 aatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcg 5058636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 23 - 252
Target Start/End: Complemental strand, 27221740 - 27221517
Alignment:
Q  23 aggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaa 122  Q
    |||||||||| | |||||||||| |||| | ||||||||||||||||||||||||||||||||||   ||| ||||||||||||||  ||||| ||||||    
T  27221740 aggtcgaaagagtatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcggagacttttgtagaatcgatgtaggaaattgtaa 27221641  T
Q  123 aatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaat 222  Q
    ||||||||| |||| | |  |||| ||||                ||| |||||||||||||||||||||||| || |||||||||||||||||||||||    
T  27221640 aatcgcaattaaaatcgactgattgtaccaaaaaaaaaa------ctatatatatgttataaatggtatatagtcataaatgacttagtttataagaaat 27221547  T
Q  223 cgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||| |||||||||||||||||    
T  27221546 cgtaaaatcgcaatcaaaatcgatggattt 27221517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 9e-42
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 24989555 - 24989704
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| ||| |||||||||||||||| |||||| |||||| ||||||| ||||||||||||||||||||||||| |||||| ||||||    
T  24989555 gtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttact-aaggacttttgta 24989653  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| ||||| || ||||||||||||||||| | ||||||||||||    
T  24989654 gaatcgatataggaaattataaaatcgcaatcaaaatcgatggattttacc 24989704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 11326631 - 11326496
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    |||||||||||||||||  ||||||| ||||| |||||||||||||||||||  ||||||| |||||||||| |||| ||||||||||||||| |||||     
T  11326631 gtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatcacaatcaaaattgaagtattttactcaaggacttttgtg 11326532  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaa 136  Q
    ||||| ||| ||||| ||||||||||||||||||||    
T  11326531 gaatcaatataggaaattgtaaaatcgcaatcaaaa 11326496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 14055587 - 14055350
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaattt 118  Q
    |||||||||||||| ||  |||||||| |  | | |||||||||||| |||||||||||||||||||||||  || ||||||||| ||||| | ||| ||    
T  14055587 cttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaatt 14055488  T
Q  119 gtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttc----taaatatatgttataaatggtatatagccacaaatgacttagttta 214  Q
    | |||||||||||||||| ||||||||||||||               |     ||||||||||||||||||||||||||| || |||||||||||||||    
T  14055487 gcaaaatcgcaatcaaaatcaatggattttaccaacaaaaaaaaaagataatattaaatatatgttataaatggtatatagtcataaatgacttagttta 14055388  T
Q  215 taagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||| ||||||||||||| |||||||| ||||||||    
T  14055387 taagaagtcgtaaaatcgcaatcaaaatctatggattt 14055350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 19 - 252
Target Start/End: Complemental strand, 14365615 - 14365378
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaattt 118  Q
    |||||||||||||| ||  |||||||| |  | | |||||||||||| |||||||||||||||||||||||  || ||||||||| ||||| | ||| ||    
T  14365615 cttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaaacgatataagaaatt 14365516  T
Q  119 gtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttc----taaatatatgttataaatggtatatagccacaaatgacttagttta 214  Q
    | |||||||||||||||| ||||||||||||||               |     ||||||||||||||||||||||||||| || |||||||||||||||    
T  14365515 gcaaaatcgcaatcaaaatcaatggattttaccaacaaaaaaaaaagataatattaaatatatgttataaatggtatatagtcataaatgacttagttta 14365416  T
Q  215 taagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||| ||||||||||||| |||||||| ||||||||    
T  14365415 taagaagtcgtaaaatcgcaatcaaaatctatggattt 14365378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 8329878 - 8330075
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnn 153  Q
    |||||||||||||||||||| |||||||||||||||  || |||||||||| |||| | ||| | ||||||| |||||||||| ||||||||||||||      
T  8329878 gtaaaatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaattgcaatcaaaatcaatggattttacc-- 8329975  T
Q  154 nnnnnnnnnnnnttctaaatatatgttat-aaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
                |  ||| |||||||||| ||||||||||||| || |||||||||||||||||| |||||||||||||||| | |||||| ||| ||||    
T  8329976 aaaaaaaataaataataagtatatgttataaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaattaaaatcaatgaattt 8330075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 252
Target Start/End: Original strand, 8346365 - 8346563
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnn 153  Q
    |||| ||||||||||||||| |||||||||||||||  || |||||||||| |||| | ||| |  ||||||| |||||| || ||||||||||||||      
T  8346365 gtaatatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaaatctcaatcataatcaatggattttaccaa 8346464  T
Q  154 nnnnnnnnnnnnttctaaatatatgttataaa-tggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
                | |||||||||||||||||| || ||||||| || | ||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  8346465 aaaaataataa-tactaaatatatgttataaaatgatatatagacatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcgatggattt 8346563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 24990017 - 24990101
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||| |||||||| || |||||| |||||||||||||||||||||||| ||| |||||||||||||||||    
T  24990017 ctaaatatatgttataaatagtatatagtcataaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattt 24990101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 25 - 151
Target Start/End: Complemental strand, 8572460 - 8572336
Alignment:
Q  25 gtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaa 124  Q
    ||||||||||||||| || |||||||||  |||| ||||||||||||||||| ||| ||| ||||||||||||||||||| |||| | ||| || |||||    
T  8572460 gtcgaaagggaatagtaatattgggactcttaaa-tcgcaatcaaaatcgaaagatgttaatcaaggacatttgtagaattgatata-gaaattataaaa 8572363  T
Q  125 tcgcaatcaaaaacaatggattttacc 151  Q
    | |||||||||| ||||||||||||||    
T  8572362 ttgcaatcaaaatcaatggattttacc 8572336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 8304422 - 8304321
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||| |||||||| || ||||||||| | |||| |||||||| ||||||||||||||||||||||||||||||| |||||||||| |||| ||    
T  8304422 actttacttcaagtcgaaagagagtagcaaaatcgcgactcgtaaaatcacaatcaaaatcgaaggattttactcaaggacttttgtagaattgatatag 8304323  T
Q  113 ga 114  Q
    ||    
T  8304322 ga 8304321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 4 - 252
Target Start/End: Original strand, 8343586 - 8343830
Alignment:
Q  4 aaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaa 103  Q
    |||||||||| ||| |||||||||||||| ||| | ||||||||  | | ||||||  |||||||||||||||| |||||||||||  || |||||||||    
T  8343586 aaaatcagaattttgcttcaggtcgaaagagaagaacaaaattgacaatcgtaaaaatgcaatcaaaatcgaagtattttactcaactacttttgtagaa 8343685  T
Q  104 tcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttat-aaatggtatatagccacaaa 202  Q
    | |||| |  || | |||||||||||||||||  ||||||||||||                | |||||||||  |||| ||||||||||||  || | |    
T  8343686 ttgatataaaaaatcgtaaaatcgcaatcaaagtcaatggatttta-----aaaaataataatactaaatataacttataaaatggtatataatcataga 8343780  T
Q  203 tgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||||||    
T  8343781 tgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggattt 8343830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 26281256 - 26281339
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||| |||||||||||||||||| || |||||||||||||||||||||||||| ||||||||  ||||||||||||||||    
T  26281256 ctaaatataagttataaatggtatatagtcataaatgacttagtttataagaaatcgttaaatcgca-acaaaatcgatggattt 26281339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 9685087 - 9685210
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| |||| |||||||| |||||||||||||   |||| ||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||||  ||    
T  9685087 actttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgatttag 9685186  T
Q  113 gaatttgtaaaatcgcaatcaaaa 136  Q
     || || ||||||| |||||||||    
T  9685187 aaaattttaaaatcacaatcaaaa 9685210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 25842524 - 25842619
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgat 108  Q
    ||||| ||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||| | ||||||||||||| | || ||||||||||||||    
T  25842524 actttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaattggaggattttactcatgaacttttgtagaatcgat 25842619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 23618211 - 23618317
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||||  ||||| ||| | || |||||||| ||||||||| ||||||   |||||||||||||||||||||| ||||||||||||||| |||||||    
T  23618211 tcaaaatcaagactttactttaagttgaaagggagtagcaaaatcgggactccgaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgtag 23618310  T
Q  102 aatcgat 108  Q
    |||||||    
T  23618311 aatcgat 23618317  T

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Target: chr7; HSP #23
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 54 - 148
Target Start/End: Complemental strand, 39182451 - 39182357
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggatttt 148  Q
    |||||||||||| |||||||||||||||||||||||  || ||||||||||||||| | ||| |||||||||||||| ||||| | |||||||||    
T  39182451 gtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgtagaatcgatataagaaattgtaaaatcgcaaccaaaatcgatggatttt 39182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 2 - 114
Target Start/End: Original strand, 1981107 - 1981217
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | ||||| ||||| ||||||||||| ||| |||||||| ||| ||||||||| ||||||||||||||||  |||||||||| | || ||||    
T  1981107 tcaaaatcgggactttacttcaagtcgaaagggattagaaaaattggaactcgtaaaatcgtaatcaaaatcgaagga--ttactcaaggtctttagtag 1981204  T
Q  102 aatcgatagagga 114  Q
    |||||||| ||||    
T  1981205 aatcgatatagga 1981217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 6916961 - 6916879
Alignment:
Q  169 taaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||| ||| ||| || || |||||||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  6916961 taaatatatgttataactggaata-agtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaaccgatggattt 6916879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 8329814 - 8329909
Alignment:
Q  55 taaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttac 150  Q
    |||||| ||||||||||| ||||||||||||||||  || |||||||||| |||| | ||| | |||||||||||||||||| ||| |||||||||    
T  8329814 taaaattgcaatcaaaattgaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaatcgcaatcaaaatcaaaggattttac 8329909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 19 - 136
Target Start/End: Complemental strand, 1977878 - 1977762
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaattt 118  Q
    |||||||||||||| ||| || ||||| |  | | ||||||||||||||||||||||||||||||||||||  |  ||| ||||||||||| | ||| |     
T  1977878 cttcaggtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaatta-ttttttagaatcgatataagaaatc 1977780  T
Q  119 gtaaaatcgcaatcaaaa 136  Q
     |||||||||||||||||    
T  1977779 ctaaaatcgcaatcaaaa 1977762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 7730193 - 7730290
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    |||||||||||| |||||||||| | ||||||||||  || |||||| ||| |||| | ||| ||||||||||||||||||||   ||||||||||||    
T  7730193 gtaaaatcgcaaccaaaatcgaatggttttactcaactacttttgtataattgatataagaaattgtaaaatcgcaatcaaaattgatggattttacc 7730290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 11325148 - 11325087
Alignment:
Q  181 ataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaat 242  Q
    |||| |||||||||| || ||||||||||||||||||||||||||||| ||||| |||||||    
T  11325148 ataattggtatatagtcataaatgacttagtttataagaaatcgtaaattcgcaatcaaaat 11325087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 26565382 - 26565479
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| ||||||||||||||||||||||||||  || ||||||||||| ||| |  || | ||||||| ||||||||||   ||||||||||||    
T  26565382 gtaaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatcaatataaaaaatcgtaaaattgcaatcaaaattgatggattttacc 26565479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 7730321 - 7730373
Alignment:
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||| ||||||||||||||||||||||||| || |||||||||||||||||    
T  7730321 aaatgatttagtttataagaaatcgtaaaatctcaatcaaaatcgatggattt 7730373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 9685222 - 9685274
Alignment:
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  9685222 aaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattt 9685274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 21846282 - 21846378
Alignment:
Q  55 taaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||||| |||||||||||||||||| ||||  || ||| ||||||||||| | ||| | |||||||| |||||||||   ||||||||||||    
T  21846282 taaaatcgcaaccaaaatcgaaggattttaatcaactacttttatagaatcgatataagaaatcgtaaaatcacaatcaaaattgatggattttacc 21846378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 27509921 - 27509973
Alignment:
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||||||||||| ||||||| |||| ||||    
T  27509921 aaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgaattt 27509973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 114
Target Start/End: Complemental strand, 4575064 - 4574965
Alignment:
Q  15 ttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    |||||||||||| |||||||||||| |||||    | | |||||||||||||||||||| ||| ||| |||||||  || ||||||||||||||| ||||    
T  4575064 ttttcttcaggttgaaagggaatagtaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaagaattctactcaactacttttgtagaatcgatatagga 4574965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 114
Target Start/End: Original strand, 8629531 - 8629622
Alignment:
Q  23 aggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    |||| |||||||||||| ||||||||||||  ||||| |||||||| ||||  ||  |||||||||||||  ||||||||||||||| ||||    
T  8629531 aggttgaaagggaatagtaaaattgggactcataaaaacgcaatcacaatcagagagttttactcaaggaattttgtagaatcgatacagga 8629622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 4 - 150
Target Start/End: Original strand, 8346250 - 8346396
Alignment:
Q  4 aaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaa 103  Q
    |||||||| | ||| |||| ||||||||| ||| | ||||||||  | | |||| |  |||| |||||||||||||||||||||||  || ||| |||||    
T  8346250 aaaatcaggattttacttccggtcgaaagagaagaacaaaattgacaatcgtaagaatgcaaacaaaatcgaaggattttactcaactacttttatagaa 8346349  T
Q  104 tcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttac 150  Q
    | |||| | ||| | |||| ||||||||||||| ||| |||||||||    
T  8346350 ttgatataagaaatcgtaatatcgcaatcaaaatcaaaggattttac 8346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 207 - 252
Target Start/End: Original strand, 22687649 - 22687694
Alignment:
Q  207 ttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||| |||||||||||||||||||| |||||||||||||||||    
T  22687649 ttagtttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattt 22687694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 26617422 - 26617502
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||    |||| || |||||||||||| || ||||  ||||||||||||| ||||||||||| |||||    
T  26617422 ctaaatatatgttataaatg----atagtcataaatgacttagtctacaagatctcgtaaaatcgcaatcaaaatcgatagattt 26617502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 19 - 109
Target Start/End: Original strand, 22687066 - 22687156
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    |||||| ||||||| ||| |||||||| | || | |||||||| ||| |||||| |||| |||||||||||  || |||||||||||||||    
T  22687066 cttcagatcgaaagagaagagcaaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttactcaactacttttgtagaatcgata 22687156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 26281171 - 26281251
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggatttt 83  Q
    ||||||||||| ||||| ||| ||||||||| ||||||||||| |  ||| | ||||||||||||||||||| ||||||||||    
T  26281171 gtcaaaatcaggactttactttaggtcgaaaaggaatagcaaa-tcagga-tcgtaaaatcgcaatcaaaattgaaggatttt 26281251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 151
Target Start/End: Complemental strand, 30294538 - 30294444
Alignment:
Q  57 aaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||| |||||||||||||||||||||||| ||  || ||| ||||||||||| | ||| |  ||||||| ||||||||  | ||||||||||||    
T  30294538 aaatcacaatcaaaatcgaaggattttacttaactacttttatagaatcgataaaagaaatcctaaaatcacaatcaaactcgatggattttacc 30294444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 75
Target Start/End: Original strand, 8253990 - 8254039
Alignment:
Q  26 tcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcga 75  Q
    |||||||||| ||||||||| | |||| ||||||||||||||||||||||    
T  8253990 tcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcga 8254039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 27509260 - 27509323
Alignment:
Q  68 aaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaat 131  Q
    ||||| ||||||||||||||||  || ||| ||||||||||| | ||| |||||||||||||||    
T  27509260 aaaattgaaggattttactcaactacttttatagaatcgatataagaaattgtaaaatcgcaat 27509323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 252
Target Start/End: Complemental strand, 4574952 - 4574919
Alignment:
Q  219 aaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||| |||||    
T  4574952 aaatcgtaaaatcgcagtcaaaatcgatagattt 4574919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 21157527 - 21157587
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    |||||||| |||||||||| ||||||||||| ||||  || ||||||||||| ||| ||||    
T  21157527 gtaaaatctcaatcaaaattgaaggattttattcaactacttttgtagaatctatatagga 21157587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 209
Target Start/End: Original strand, 21846393 - 21846433
Alignment:
Q  169 taaatatatgttataaatggtatatagccacaaatgactta 209  Q
    ||||||||||||||||||| ||||||| || ||||||||||    
T  21846393 taaatatatgttataaatgatatatagtcataaatgactta 21846433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 3e-57; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 9770460 - 9770211
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| ||| ||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| | ||||||    
T  9770460 gtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtcttttgta 9770361  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| || || |||||||||||||||||||| | ||| ||||||||              | ||||||||||||||| |||||||||||| || |    
T  9770360 gaatcgatatagcaaattgtaaaatcgcaatcaaaatcgatgaattttacc--caaaaaaattaatactaaatatatgttatgaatggtatatagtcata 9770263  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    | | |||||||||||||||||||||||||||||| ||||||| ||| |||||    
T  9770262 agtaacttagtttataagaaatcgtaaaatcgcaatcaaaattgatagattt 9770211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 9911192 - 9911441
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    |||||||| || ||||| |||||  |||||||||||||| ||||| |||||| ||||||||||||| |||| ||||||||||||||| || || ||||||    
T  9911192 gtcaaaattaggactttacttcatatcgaaagggaatagtaaaatcgggactcgtaaaatcgcaataaaaaacgaaggattttactcgagaacttttgta 9911291  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| | ||| |||||||||||||||||||| | ||||| ||||||              | || ||||||||||||||||||||||||| || |    
T  9911292 gaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttacc--aaaaaataataatacttaatatatgttataaatggtatatagtcata 9911389  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9911390 aatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattt 9911441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 36121171 - 36120923
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| |  |||| ||||| || |||||||||||||  ||| |||||| ||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  36121171 gtcaaaatcgggtctttacttcaagttgaaagggaatagcttaatcgggactcgtaaaatcggaatcaaaatcgaaagattttactcaaggacttttgta 36121072  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    | ||||||| ||||| |||||||||||||||||||| | ||||||||||||              | |||||||||| ||||||||||||||||| || |    
T  36121071 gtatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc---aaaaataataatactaaatatattttataaatggtatatagtcata 36120975  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||| ||||    
T  36120974 aatgacttagtatataagaaatcgtaaaatcgcaatcaaaatcgatgaattt 36120923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 252
Target Start/End: Complemental strand, 5376001 - 5375763
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||||||| |||   ||||| ||||| |||||| |||||||||||||||||||||||||||||||||||||||| | ||||||||| ||| ||    
T  5376001 actttacttcaggtcaaaaataaatagtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttctgtagaatctatatag 5375902  T
Q  113 gaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtt 212  Q
    ||| |||||||||| ||||||||| | ||||||||||||              | |||||||||||||||||||| ||||| | || |||||||||||||    
T  5375901 gaaattgtaaaatcacaatcaaaatcgatggattttacc-caaaaaaaattaatactaaatatatgttataaatgatatatggtcataaatgacttagtt 5375803  T
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||| ||||| |||||| ||||    
T  5375802 tataagaaatcgtaaaatcgcaatcaaagtcgatgaattt 5375763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 23064742 - 23064995
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| |||||||||||||||||||| | |||| || ||| ||||||||||||||||||| ||||||||||| |||||||| ||||||    
T  23064742 gtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttattcaaggacttttgta 23064841  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| ||||| ||||||||| |||||||||| | |  |||||||||              | |||||||||||||||||||| ||||  | || |    
T  23064842 gaatcgatataggaaattgtaaaattgcaatcaaaatcgaatgattttacc--aaaaaataataatactaaatatatgttataaatgatatagggtcata 23064939  T
Q  201 aatgact--tagtttataagaaatcgtaaaatcgcagtcaaaatcgatggatttga 254  Q
    |||||||  ||||||||||||||||||||||| ||| | |||||||||||||||||    
T  23064940 aatgacttatagtttataagaaatcgtaaaattgcaattaaaatcgatggatttga 23064995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 20 - 248
Target Start/End: Original strand, 5361765 - 5361989
Alignment:
Q  20 ttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttg 119  Q
    ||||||||||||| ||| |||||||| |  | | ||||||| |||| |||||||||||| ||||||||||  || ||||||||||||||| | ||| | |    
T  5361765 ttcaggtcgaaagagaagagcaaaatagacaatcgtaaaattgcaaacaaaatcgaagggttttactcaactacttttgtagaatcgatatatgaaatcg 5361864  T
Q  120 taaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataaga 219  Q
    ||||||||||||||||  | |||||||| |||              | |||||||||||||| ||||||||||||  || ||||||||||||||||||||    
T  5361865 taaaatcgcaatcaaagtcgatggatttgaccaaaagaaaaa----tactaaatatatgttaaaaatggtatataatcataaatgacttagtttataaga 5361960  T
Q  220 aatcgtaaaatcgcagtcaaaatcgatgg 248  Q
    |||||||||||| || |||||||||||||    
T  5361961 aatcgtaaaatctcaatcaaaatcgatgg 5361989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 30 - 151
Target Start/End: Original strand, 8010946 - 8011067
Alignment:
Q  30 aagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgca 129  Q
    |||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||  |  ||| ||||||||||| | ||| |||||||||||||    
T  8010946 aagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactatttttatagaatcgatataagaaattgtaaaatcgca 8011045  T
Q  130 atcaaaaacaatggattttacc 151  Q
    ||||||| | ||| ||||||||    
T  8011046 atcaaaatcgatgtattttacc 8011067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 6346736 - 6346882
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| ||| ||| |||||||||||||||||| |||||||| |  | | |||||||| |||||||||||||||||||||||||||  || ||||||    
T  6346736 gtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatcgaaaatcgtaaaatcacaatcaaaatcgaaggattttactcaactacttttgta 6346835  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattt 147  Q
    ||||  ||| | ||| |||||||||||||||||||| | ||||||||    
T  6346836 gaatgaatataagaaattgtaaaatcgcaatcaaaatcgatggattt 6346882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 13023753 - 13023669
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||| ||||||||||| |||||    
T  13023753 ctaaatatatgttataaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgattt 13023669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 54 - 252
Target Start/End: Complemental strand, 10143195 - 10142998
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnn 153  Q
    ||||||||||||||||||||||||||||||| ||||  |  ||||||||||||||| | ||  ||||||||||||||||||||   |||||||||| |      
T  10143195 gtaaaatcgcaatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaaattgatggattttatcaa 10143096  T
Q  154 nnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
                | |||||||||| |||||| |||||||||| || |||||||||  ||||||||||||||||||||| || |||||||||||||||||    
T  10143095 aaaaaaaataa-tactaaatatatattataattggtatatagtcataaatgacttgatttataagaaatcgtaaaatcacaatcaaaatcgatggattt 10142998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 17466261 - 17466178
Alignment:
Q  169 taaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||||||||||| || |||||||||||||||| |||||||||||||||||| || ||||||||||||||    
T  17466261 taaatatatgttataaatggtatatagtcataaatgacttagtttattagaaatcgtaaaatcgcaatctaaatcgatggattt 17466178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 55476335 - 55476228
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | ||||| ||||| ||||||||||| ||  ||||| || ||| |||||||||||||||||||||||||||||||||||||||| |||||||    
T  55476335 tcaaaatcgggactttacttcaagtcgaaagggagtaataaaatcggtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 55476236  T
Q  102 aatcgata 109  Q
    ||||||||    
T  55476235 aatcgata 55476228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 8889564 - 8889327
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | | ||| |||||||||||||| ||  ||||||||||  | |||||||||||||| |||||||||||||| ||||||||  || ||||||    
T  8889564 gtcaaaatcgggattttgcttcaggtcgaaagagag-agcaaaattgacaattgtaaaatcgcaaccaaaatcgaaggatcttactcaactacttttgta 8889466  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||         || |||||||||||||||||||| | ||| ||||||||              | |||||||||| ||||||||||||||||| || |    
T  8889465 gaat---------aaattgtaaaatcgcaatcaaaatcgatgaattttaccaacaaaaaaa----tactaaatatatattataaatggtatatagtcata 8889379  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    || ||||| ||||||||||||||||||||||||| |||||||||||| ||||    
T  8889378 aacgacttggtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattt 8889327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 13 - 136
Target Start/End: Original strand, 13551465 - 13551588
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| |||| |||||||| |||||||||||||   |||| ||||||||||||| |||||||||||||||||||| ||||| ||| ||||||||||  ||    
T  13551465 actttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggacttttatagaatcgatttag 13551564  T
Q  113 gaatttgtaaaatcgcaatcaaaa 136  Q
     || || ||||||| |||||||||    
T  13551565 aaaattttaaaatcacaatcaaaa 13551588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 37240440 - 37240361
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatg 247  Q
    ||||||||||| ||||||||||||| || || |||||||||| |||||||||||||||||||||||| ||||||||||||    
T  37240440 ctaaatatatgatataaatggtatagagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatg 37240361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 13023894 - 13023780
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||| |||||||| |||||||||||| || ||| |||||||| ||||||| || ||| |||||||| ||||||  |||||| |||||||| ||    
T  13023894 actttacttcaagtcgaaagagaatagcaaaatcggaactcgtaaaatcacaatcaagatagaatgattttacccaaggaattttgtaaaatcgatatag 13023795  T
Q  113 gaatttgtaaaatcg 127  Q
    ||| || ||||||||    
T  13023794 gaaattttaaaatcg 13023780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 37240587 - 37240479
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    |||||||| |||  ||| ||||||| |||||| ||| ||| |||| |  | | ||||||||||||||||||||||||||||||||||||  || ||||||    
T  37240587 gtcaaaattagagttttgcttcaggacgaaagagaagagctaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactacttttgta 37240488  T
Q  101 gaatcgata 109  Q
    |||||||||    
T  37240487 gaatcgata 37240479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 114
Target Start/End: Complemental strand, 8367511 - 8367437
Alignment:
Q  40 caaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    |||||| |||||| ||||||| |||||||||||||||||||||||||||||||| || |||  ||||||| ||||    
T  8367511 caaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggactttggtaatatcgatatagga 8367437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 10394905 - 10394824
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaa 135  Q
    |||||||||||||||||||||||||| |||||||||  || |||||||||||| || ||||| | |||||||  ||||||||    
T  10394905 gtaaaatcgcaatcaaaatcgaaggactttactcaactacttttgtagaatcggtataggaaatcgtaaaattacaatcaaa 10394824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 151
Target Start/End: Complemental strand, 7045057 - 7044961
Alignment:
Q  55 taaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    |||||||||||||||||||||| ||||||||||||  || |||| | |||||||| | ||| | |||||||  ||||||||| | ||||||||||||    
T  7045057 taaaatcgcaatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggattttacc 7044961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 7045292 - 7045204
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaa 89  Q
    ||||||||  ||| ||| |||||||||||||||||| ||||||||    | |  |||||||||||||||||||||||||||||||||||    
T  7045292 gtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttactcaa 7045204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 7452853 - 7452750
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    |||||||| || | ||| |||||||||||||||||| || ||| |||  | | |||||||||||||||||||||||||| |||||||||  || ||||||    
T  7452853 gtcaaaattaggattttgcttcaggtcgaaagggaagagaaaagttgaaaatcgtaaaatcgcaatcaaaatcgaagga-tttactcaactacttttgta 7452755  T
Q  101 gaatc 105  Q
    |||||    
T  7452754 gaatc 7452750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 200 - 252
Target Start/End: Original strand, 13551600 - 13551652
Alignment:
Q  200 aaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||    
T  13551600 aaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattt 13551652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 136
Target Start/End: Complemental strand, 24719868 - 24719788
Alignment:
Q  56 aaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaa 136  Q
    ||||||| ||||| |||||||||||||||||| |  || ||||||||||||||| | ||| | ||||||||||||||||||    
T  24719868 aaaatcgaaatcacaatcgaaggattttactcgattacttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaaa 24719788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 54 - 150
Target Start/End: Complemental strand, 17466374 - 17466278
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttac 150  Q
    ||||||| |||| |||||| ||| |||| |||||||  || ||||| ||||||||| | ||| ||||||||| |||||||||| | |||||||||||    
T  17466374 gtaaaattgcaaacaaaattgaaagattatactcaactacttttgtggaatcgatataagaaattgtaaaattgcaatcaaaatcgatggattttac 17466278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 4157324 - 4157269
Alignment:
Q  52 ttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcga 107  Q
    |||||||||||||||||| |||||| ||||||||||||  || |||||||||||||    
T  4157324 ttgtaaaatcgcaatcaagatcgaaagattttactcaactacttttgtagaatcga 4157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 107
Target Start/End: Complemental strand, 4157611 - 4157556
Alignment:
Q  52 ttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcga 107  Q
    |||||||||||||||||| |||||| ||||||||||||  || |||||||||||||    
T  4157611 ttgtaaaatcgcaatcaagatcgaaagattttactcaactacttttgtagaatcga 4157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 75
Target Start/End: Complemental strand, 8409863 - 8409790
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcga 75  Q
    |||||||| | ||||| ||||| || |||||||| ||||||||||| || || |||||||| ||||||||||||    
T  8409863 tcaaaatcgggactttacttcaagttgaaagggagtagcaaaattgagatttataaaatcgtaatcaaaatcga 8409790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 216 - 252
Target Start/End: Complemental strand, 4157090 - 4157054
Alignment:
Q  216 aagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||||| |||||||||||||||||    
T  4157090 aagaaatcgtaaaatcgcaatcaaaatcgatggattt 4157054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 23 - 106
Target Start/End: Original strand, 5943062 - 5943145
Alignment:
Q  23 aggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcg 106  Q
    |||||||||||||| ||||||||    | | ||||||||||||  ||||| ||||||||||||||||  || ||||||||||||    
T  5943062 aggtcgaaagggaagagcaaaatcaaaaatcgtaaaatcgcaagtaaaattgaaggattttactcaactacttttgtagaatcg 5943145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 6346843 - 6346882
Alignment:
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  6346843 tataagaaattgtaaaatcgcaatcaaaatcgatggattt 6346882  T

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Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 54 - 109
Target Start/End: Original strand, 8743599 - 8743654
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    |||| |||| ||||||||||||| ||||||||||||  ||||||||| ||||||||    
T  8743599 gtaacatcgtaatcaaaatcgaaagattttactcaactacatttgtataatcgata 8743654  T

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Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 24719816 - 24719782
Alignment:
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatg 247  Q
    |||||||||||||||||||||| ||||||||||||    
T  24719816 tataagaaatcgtaaaatcgcaatcaaaatcgatg 24719782  T

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Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 213 - 254
Target Start/End: Original strand, 5361853 - 5361894
Alignment:
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggatttga 254  Q
    |||| ||||||||||||||||| ||||| |||||||||||||    
T  5361853 tatatgaaatcgtaaaatcgcaatcaaagtcgatggatttga 5361894  T

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Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 9149554 - 9149611
Alignment:
Q  52 ttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    |||||||||  |||||||||| ||||||||||||||||  || || ||||||||||||    
T  9149554 ttgtaaaattccaatcaaaattgaaggattttactcaactactttcgtagaatcgata 9149611  T

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Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 86
Target Start/End: Complemental strand, 4157082 - 4157050
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttact 86  Q
    |||||||||||||||||||||| ||||||||||    
T  4157082 gtaaaatcgcaatcaaaatcgatggattttact 4157050  T

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Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 252
Target Start/End: Original strand, 31237757 - 31238007
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| ||||| |||||| || ||||||||||| ||||| |||||| |||||||||||||||| ||||||||||||||||||||||| ||||||    
T  31237757 gtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttactcaaggacttttgta 31237856  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
     |||||||| || || ||||||||| |||||||||| | ||||||||||||                 | ||||||||||||||||||||||||  || |    
T  31237857 aaatcgatatagaaaattgtaaaattgcaatcaaaatcgatggattttaccaaaaaataataata-catgaatatatgttataaatggtatataatcata 31237955  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31237956 aatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattt 31238007  T

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Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 23 - 252
Target Start/End: Complemental strand, 1405109 - 1404882
Alignment:
Q  23 aggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaa 122  Q
    ||||| ||||||||||||||||| || |||  |||||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||| ||||||    
T  1405109 aggtcaaaagggaatagcaaaatcggtactcataaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatcgatataggaaattgtaa 1405010  T
Q  123 aatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaat 222  Q
    ||| |||||||||| | |||||||| |                | |||| ||||||||||||||||| ||||| || |||||||||||| ||||||||||    
T  1405009 aattgcaatcaaaatcgatggatttaa--aaaaataataatattcctaagtatatgttataaatggtgtatagtcataaatgacttagtatataagaaat 1404912  T
Q  223 cgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||| || |||||||||||||||||    
T  1404911 cgtaaaatcacaatcaaaatcgatggattt 1404882  T

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Target: chr2; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 20064071 - 20063921
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| |  |||| |||||||| |||||||||||||||||| | |||| |||||||||||||||||||||||| ||||||||||||||| ||||||    
T  20064071 gtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaaggacttttgta 20063972  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| ||||| |||||||||||||| ||||| | ||||||||||||    
T  20063971 gaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttacc 20063921  T

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Target: chr2; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 5 - 136
Target Start/End: Original strand, 19262101 - 19262232
Alignment:
Q  5 aaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaat 104  Q
    ||||| ||||||| ||||| |||||| |||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||    
T  19262101 aaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttactcaaggacttttgtagaat 19262200  T
Q  105 cgatagaggaatttgtaaaatcgcaatcaaaa 136  Q
    ||||| | ||| ||||||||||||||||||||    
T  19262201 cgatataagaaattgtaaaatcgcaatcaaaa 19262232  T

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Target: chr2; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 30433163 - 30433013
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | || || ||||||||||||| | ||||| ||||| ||||||  |||||||||||||||||||||| |||||||||||||||| ||| ||    
T  30433163 gtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcgcaatcaaaatcgaatgattttactcaaggacttttata 30433064  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| ||||| ||||||||||||||||||||   ||||||||||||    
T  30433063 gaatcgatataggaaattgtaaaatcgcaatcaaaatagatggattttacc 30433013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 13 - 108
Target Start/End: Original strand, 27523889 - 27523984
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgat 108  Q
    ||||| ||||| ||||||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27523889 actttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgat 27523984  T

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Target: chr2; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 252
Target Start/End: Complemental strand, 36430156 - 36429947
Alignment:
Q  41 aaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaa 140  Q
    |||||||||||| ||||||||||||||||||||||||||| ||||||||  |  ||||||||||||||| |  ||    |||||| |||||||||| | |    
T  36430156 aaaattgggactcgtaaaatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatcgataaaaaaaaaattaaaattgcaatcaaaatcga 36430057  T
Q  141 tggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaa 240  Q
    |||||||||||              | |||||||||||||| ||||| ||||||| || |||| |||||||||||||||||||||| ||||||| |||||    
T  36430056 tggattttacctaaaaaaaaaaa--tactaaatatatgttagaaatgatatatagtcataaattacttagtttataagaaatcgtacaatcgcaatcaaa 36429959  T
Q  241 atcgatggattt 252  Q
    ||||||||||||    
T  36429958 atcgatggattt 36429947  T

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Target: chr2; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 108
Target Start/End: Original strand, 20034004 - 20034110
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | ||||| ||||| ||||||||||| ||||||||| | |||| ||||||||||||||||||| |||||||||||||||||||| |||||||    
T  20034004 tcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaaggacttttgtag 20034103  T
Q  102 aatcgat 108  Q
    |||||||    
T  20034104 aatcgat 20034110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 13 - 114
Target Start/End: Complemental strand, 974675 - 974573
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattggga-cttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgataga 111  Q
    ||||| ||||| ||||||||||| ||||||||| || | || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  974675 actttacttcaagtcgaaagggagtagcaaaatcggaaactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatata 974576  T
Q  112 gga 114  Q
    |||    
T  974575 gga 974573  T

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Target: chr2; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 25538926 - 25539076
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| | ||||||||||||||||||| ||||| ||| || |||||||||||||||||||  |||||||||||| ||  || ||||||    
T  25538926 gtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttactgaactacttttgta 25539025  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| |  || ||||||||| |||||||||| | || |||||||||    
T  25539026 gaatcgatataaaaaattgtaaaattgcaatcaaaatcgatagattttacc 25539076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 21 - 252
Target Start/End: Original strand, 35565755 - 35565984
Alignment:
Q  21 tcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggatttta---ctcaaggacatttgtagaatcgatagaggaatt 117  Q
    |||||||||| | ||| |||||||| |  | ||||||||||||||  |||||||||||||||||   |||||  || ||||||||||||||| | ||| |    
T  35565755 tcaggtcgaaggagaagagcaaaatcgataattgtaaaatcgcaactaaaatcgaaggattttattactcaactacttttgtagaatcgatataagaaat 35565854  T
Q  118 tgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataa 217  Q
      ||||||| ||||||||| | ||||||||||||              | ||||||||||||||||||| |||||||| || ||||||||| ||||||||    
T  35565855 cataaaatcacaatcaaaatcgatggattttaccaaaaaaaaa-----tactaaatatatgttataaattgtatatagtcataaatgactttgtttataa 35565949  T
Q  218 gaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||  ||| |||||||||||||||||    
T  35565950 gaaatcgtaaaactgcaatcaaaatcgatggattt 35565984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 21869102 - 21869210
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| ||||| ||||||||||||||| ||||| ||||||  |||||||||||| ||||||||||||||||| |||| ||| ||||||    
T  21869102 gtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcgcaattaaaatcgaaggattttattcaatgacttttgta 21869201  T
Q  101 gaatcgata 109  Q
    |||||||||    
T  21869202 gaatcgata 21869210  T

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Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 31578187 - 31578103
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||| ||| ||||||| |||||||||    
T  31578187 ctaaatatatgttataaatggtatatagtcataaatgacttagtttataataaatcgtaaaattgcaatcaaaattgatggattt 31578103  T

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Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 2 - 108
Target Start/End: Complemental strand, 7302129 - 7302023
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | ||||| ||||| || ||| |||  ||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||| |||||||    
T  7302129 tcaaaatcgggactttacttcaagttgaaggggggtagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggacttttgtag 7302030  T
Q  102 aatcgat 108  Q
    |||||||    
T  7302029 aatcgat 7302023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 248
Target Start/End: Original strand, 1690675 - 1690754
Alignment:
Q  169 taaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatgg 248  Q
    ||||||||| ||||||||||||||||| || ||| ||||||||||||||||||||||||||||||| |||||||| ||||    
T  1690675 taaatatattttataaatggtatatagtcataaaagacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgg 1690754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 252
Target Start/End: Complemental strand, 30432593 - 30432518
Alignment:
Q  177 tgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||  | ||||||||||||||||||||||||||||||| ||| |||||||||||||||||    
T  30432593 tgttataaatggtatatagtaataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattt 30432518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 28 - 108
Target Start/End: Complemental strand, 34578210 - 34578130
Alignment:
Q  28 gaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgat 108  Q
    |||||||| ||||||||| ||||||  |||||||||||||||||| ||||||||||||||| |||| ||||||||||||||    
T  34578210 gaaagggagtagcaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcatggacttttgtagaatcgat 34578130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 55 - 252
Target Start/End: Original strand, 15588690 - 15588880
Alignment:
Q  55 taaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnn 154  Q
    ||||||||||| |||||||||||||||||||||||  || || |||| ||||||| | ||| || ||||||||||||||||| | ||||||||||||       
T  15588690 taaaatcgcaaccaaaatcgaaggattttactcaattac-ttcgtaggatcgatataagaaattataaaatcgcaatcaaaatcgatggattttacc--- 15588785  T
Q  155 nnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
               | |||||||||||  ||||||||||||||  || ||||||||||||||||| ||||||||||||||||| | |||| |||| |||||    
T  15588786 -aaaaaaataatactaaatatatg--ataaatggtatataatcataaatgacttagtttatatgaaatcgtaaaatcgcaataaaaaacgattgattt 15588880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 147
Target Start/End: Complemental strand, 16767079 - 16766987
Alignment:
Q  55 taaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattt 147  Q
    |||||||||||||||||| ||||||||||||||||  || ||| ||||||||||| | ||| | |||||||||||||||||| ||| ||||||    
T  16767079 taaaatcgcaatcaaaattgaaggattttactcaactacttttatagaatcgatataagaaatcgtaaaatcgcaatcaaaatcaaaggattt 16766987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 19245937 - 19245824
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | | ||| ||||| || ||||||||||||||||||    | | |||||||||||||||||||| |||||||||||| ||  || ||||||    
T  19245937 gtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttacttaactacttttgta 19245838  T
Q  101 gaatcgatagagga 114  Q
    ||||||||| ||||    
T  19245837 gaatcgatatagga 19245824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 169 - 252
Target Start/End: Complemental strand, 20063896 - 20063813
Alignment:
Q  169 taaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||| |||| |||||||||||| || || |||||| |||||| |||||||| |||||||||||| | |||||||||| ||||    
T  20063896 taaatacatgtgataaatggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattt 20063813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 13502507 - 13502604
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||| ||||||||| ||||||| ||| ||||  |  ||||||||||| ||| | ||| | |||||||||||||||||| | ||||||||||||    
T  13502507 gtaaaatcgtaatcaaaattgaaggatattagtcaactatttttgtagaatctatataagaaatcgtaaaatcgcaatcaaaatcgatggattttacc 13502604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 8428570 - 8428466
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | | ||| ||| ||||||||||||||||| |||||    | || ||||||||||||||||||||||||||||| |||||  |  ||||||    
T  8428570 gtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatcgaaggattttgctcaactatttttgta 8428471  T
Q  101 gaatc 105  Q
    |||||    
T  8428470 gaatc 8428466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 13502561 - 13502600
Alignment:
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  13502561 tataagaaatcgtaaaatcgcaatcaaaatcgatggattt 13502600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 34578124 - 34578085
Alignment:
Q  36 atagcaaaattgggacttgtaaaatcgcaatcaaaatcga 75  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  34578124 atagcaaaatcgggactcgtaaaatcgcaatcaaaatcga 34578085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 1690566 - 1690644
Alignment:
Q  58 aatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaa 136  Q
    |||||||| ||||| ||||||| |||||| ||  || |||||  |||||||| | ||||| ||||||||||||||||||    
T  1690566 aatcgcaaccaaaagcgaaggaatttactgaactacttttgttaaatcgatataagaattcgtaaaatcgcaatcaaaa 1690644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 252
Target Start/End: Original strand, 25539222 - 25539256
Alignment:
Q  218 gaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||| ||||||||||||||||||||||||||    
T  25539222 gaaatcgttaaatcgcagtcaaaatcgatggattt 25539256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 27749290 - 27749396
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| | ||| |||||| |||||||| | ||| |||||    | | |||||||||||||| |||| ||| || ||||||||||||  ||||||    
T  27749290 gtcaaaatcagtattttacttcagatcgaaaggaattagtaaaatgacaaatcgtaaaatcgcaatctaaattgaatgagtttactcaaggatttttgta 27749389  T
Q  101 gaatcga 107  Q
    |||||||    
T  27749390 gaatcga 27749396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 20034114 - 20034155
Alignment:
Q  34 gaatagcaaaattgggacttgtaaaatcgcaatcaaaatcga 75  Q
    |||||||||| | |||||| ||||||||||||||||||||||    
T  20034114 gaatagcaaagtcgggactcgtaaaatcgcaatcaaaatcga 20034155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 251
Target Start/End: Complemental strand, 34841816 - 34841784
Alignment:
Q  219 aaatcgtaaaatcgcagtcaaaatcgatggatt 251  Q
    |||||||||||||||| ||||||||||||||||    
T  34841816 aaatcgtaaaatcgcaatcaaaatcgatggatt 34841784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 3e-54; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 246
Target Start/End: Original strand, 7489064 - 7489307
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| ||||| ||||| ||||||||| |||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||| ||||||    
T  7489064 gtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttactcaaggacttttgta 7489163  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| || || |||||||||||||||||||| | ||| |||||||               | |||||||||||||||||||| ||||||| || |    
T  7489164 gaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttac--tcaaaaatattaatactaaatatatgttataaatgatatatagtcata 7489261  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgat 246  Q
    ||||||||| ||||||||||||| |||||| ||| |||||||||||    
T  7489262 aatgacttaatttataagaaatcataaaattgcaatcaaaatcgat 7489307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 5922396 - 5922148
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||  | || |||| ||||||||||||||||||||||||||||||||| || ||||||    
T  5922396 gtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttttgta 5922297  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| ||||| ||||||||||||||||  || | ||||||||||||              | ||||||||||||||| |||||||||||| || |    
T  5922296 gaatcgatataggaaattgtaaaatcgcaatc-taatcgatggattttacc--caaaaaatttaatactaaatatatgttatgaatggtatatagtcata 5922200  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||| || |||||||||||||| ||||||||| |||||||||||||||||    
T  5922199 aatgacctaatttataagaaatcgcaaaatcgcaatcaaaatcgatggattt 5922148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 11879948 - 11879699
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | | ||| ||||||||| ||||||||||| ||||| || ||| ||||||||||||||||||||||||||||||||  ||| || ||| ||    
T  11879948 gtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaacttttata 11879849  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| || || ||||||||||||| |||||| | ||||||||||||              | |||||||||||||||||||||||||||| || |    
T  11879848 gaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttacc--aaaaaataataatactaaatatatgttataaatggtatatagtcata 11879751  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  11879750 aattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattt 11879699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 11897364 - 11897115
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | | ||| ||||||||| ||||||||||| ||||| || ||| ||||||||||||||||||||||||||||||||  ||| || ||| ||    
T  11897364 gtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaacttttata 11897265  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| || || ||||||||||||| |||||| | ||||||||||||              | |||||||||||||||||||||||||||| || |    
T  11897264 gaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttacc--aaaaaataataatactaaatatatgttataaatggtatatagtcata 11897167  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  11897166 aattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattt 11897115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 45403377 - 45403128
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | |||||  |||| ||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| || ||| ||||||    
T  45403377 gtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttgta 45403278  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| ||||| |||||||| ||||||||||| | || |||||||||               | |||||||||||||||||||||||||   || |    
T  45403277 gaatcgatataggaaattgtaaaa-cgcaatcaaaatcgatagattttaccaaaaaaataataatat-taaatatatgttataaatggtatattatcata 45403180  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||| ||| ||||| ||||||||||||||| |||||||||||||||||    
T  45403179 aatgacttggttgataaggaatcgtaaaatcgcaatcaaaatcgatggattt 45403128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 23142522 - 23142274
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||||| |||||  ||||  |||||||||||||||||||  || | | |||||||||||||  |||||||| ||||||| ||||  || ||||||    
T  23142522 gtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatcgcaatttaaatcgaatgattttagtcaaaaacttttgta 23142423  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    ||||||||| | ||| |||||||||||||||||||| | ||||| ||||||              | |||||||||||||||||||||||||||| || |    
T  23142422 gaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaataataa---tactaaatatatgttataaatggtatatagtcata 23142326  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  23142325 aatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattt 23142274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 19 - 252
Target Start/End: Original strand, 19704256 - 19704485
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaattt 118  Q
    ||||| ||| ||||||||||||||||| |||||| |||||||||||||||||||| ||||| |||||||||||||  ||||||||||||||   ||| |     
T  19704256 cttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggaatttactcaaggactgttgtagaatcgatatttgaaatc 19704355  T
Q  119 gtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataag 218  Q
     ||||||| ||||||||| | ||||||||||||                |||||||||||||| ||||||||||||| || |||| |||| |||||||||    
T  19704356 ttaaaatcacaatcaaaatcgatggattttacctaaaaaaaaaaa----ctaaatatatgttacaaatggtatatagtcataaataacttggtttataag 19704451  T
Q  219 aaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||| ||| |||||||||||||||||    
T  19704452 aaatcgtaaaattgcaatcaaaatcgatggattt 19704485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 24414068 - 24414217
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||  ||||||| ||||| ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| |  ||||||    
T  24414068 gtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatttttgta 24414167  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttac 150  Q
    ||||||||| ||||| ||||||||||  |||||||  ||||| |||||||    
T  24414168 gaatcgatataggaaattgtaaaatcctaatcaaattcaatgaattttac 24414217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 41 - 252
Target Start/End: Complemental strand, 15294977 - 15294769
Alignment:
Q  41 aaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaa 140  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||||||| || ||||||||||| ||| | ||| |  ||||||||||| ||||| | |    
T  15294977 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatcca 15294878  T
Q  141 tggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaa 240  Q
    |||||||||||              | |||||||||||||| |||| || ||||| || ||||||||||||||||||||||| ||||||||||| |||||    
T  15294877 tggattttacctaaaaaaataa---tactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaa 15294781  T
Q  241 atcgatggattt 252  Q
    ||||||||||||    
T  15294780 atcgatggattt 15294769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 41 - 252
Target Start/End: Complemental strand, 15475346 - 15475138
Alignment:
Q  41 aaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaa 140  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||||||| || ||||||||||| ||| | ||| |  ||||||||||| ||||| | |    
T  15475346 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatcca 15475247  T
Q  141 tggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaa 240  Q
    |||||||||||              | |||||||||||||| |||| || ||||| || ||||||||||||||||||||||| ||||||||||| |||||    
T  15475246 tggattttacctaaaaaaataa---tactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaa 15475150  T
Q  241 atcgatggattt 252  Q
    ||||||||||||    
T  15475149 atcgatggattt 15475138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 6 - 243
Target Start/End: Complemental strand, 32424677 - 32424440
Alignment:
Q  6 aatcagaacttttcttcagg-tcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaat 104  Q
    |||||| ||||| ||||| | ||||| |||||||||||| | || ||| ||||||||||||| |||||||||||||||||||||||||  ||||||||||    
T  32424677 aatcagtactttacttcaagatcgaaggggaatagcaaa-tcggaactcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaat 32424579  T
Q  105 cgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatg 204  Q
    ||| | ||||| ||||||||||||||| |||| | || ||||||| |               |  | |||||||||||||||||||||||| || |||||    
T  32424578 cgagataggaaattgtaaaatcgcaataaaaatcgatagattttatccagaaaaattaatactaaatatatatgttataaatggtatatagtcataaatg 32424479  T
Q  205 acttagtttataagaaatcgtaaaatcgcagtcaaaatc 243  Q
    ||||||| ||||| |||||||||||||||| ||||||||    
T  32424478 acttagtatataataaatcgtaaaatcgcaatcaaaatc 32424440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 2 - 104
Target Start/End: Complemental strand, 16752370 - 16752268
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||  ||||||| ||||| ||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||    
T  16752370 tcaaaattggaactttacttcaagtcgaaagggagtagcaaaattgggactcgtaaaatcgcaaacaaaatcgaaggattttactcaaggaattttgtag 16752271  T
Q  102 aat 104  Q
    |||    
T  16752270 aat 16752268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 247
Target Start/End: Complemental strand, 6811167 - 6810925
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| |||||||  ||||  ||||||| ||| |||||||| |  | | |||||||||||| ||||||||||| |||||| ||||  || ||||||    
T  6811167 gtcaaaatcggaactttgtttcaaatcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaagaattttaatcaactacttttgta 6811068  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccaca 200  Q
    |||| |||| | ||| ||| |||||||||||||||| | ||||||||||||              | |||||||||||||||||||| |||||||  | |    
T  6811067 gaatagatataagaaattg-aaaatcgcaatcaaaatcgatggattttaccaaaaaaaataa---tactaaatatatgttataaatgatatatagttata 6810972  T
Q  201 aatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatg 247  Q
    |||||||||||||||| ||||||||||||||| | ||||||||||||    
T  6810971 aatgacttagtttatatgaaatcgtaaaatcgtaatcaaaatcgatg 6810925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 108
Target Start/End: Complemental strand, 2040464 - 2040360
Alignment:
Q  4 aaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaa 103  Q
    |||||| | ||||| ||||| |||||||| || ||||||||| || ||| ||||||||||||||||||||||||||||||||||| |||| |||||||||    
T  2040464 aaaatcgggactttacttcaagtcgaaagagagtagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttactcatggacttttgtagaa 2040365  T
Q  104 tcgat 108  Q
    |||||    
T  2040364 tcgat 2040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 168 - 252
Target Start/End: Complemental strand, 31424346 - 31424262
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||||||||||||| |||||||||| || ||| ||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  31424346 ctaaatatatgttataattggtatatagtcataaacgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattt 31424262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 55 - 149
Target Start/End: Complemental strand, 17647291 - 17647197
Alignment:
Q  55 taaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggatttta 149  Q
    |||||||||||||||||||||||||||||||||||  |  ||||||||||||||| | ||| |||||||||||||||||||| | ||||||||||    
T  17647291 taaaatcgcaatcaaaatcgaaggattttactcaactagttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggatttta 17647197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 29384093 - 29384335
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | | ||| ||||||||||||||  || || ||||| |  | | |||||||||||| |||||||||||||||||||||||  || ||||||    
T  29384093 gtcaaaatcgggattttgcttcaggtcgaaagaaaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactacttttgta 29384192  T
Q  101 gaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc---nnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagcc 197  Q
    ||||  ||| | ||| | |||||||||||||||||| | ||||||||||||                 | |||||||||||||||||||||||||||| |    
T  29384193 gaattaatataagaaatcgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaaatactaatactaaatatatgttataaatggtatatagtc 29384292  T
Q  198 acaaatgacttagtttataagaaatcgtaaaatcgcagtcaaa 240  Q
    | |||||| ||  |||||||||||||||||||||||| |||||    
T  29384293 ataaatgaattgttttataagaaatcgtaaaatcgcaatcaaa 29384335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 169 - 252
Target Start/End: Original strand, 9212202 - 9212285
Alignment:
Q  169 taaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||| |||||||||||||||| | || |||||| ||||||||||||||||| |||||||||| |||||||||||||||||    
T  9212202 taaatataggttataaatggtatatggtcataaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggattt 9212285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 40541602 - 40541709
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtag 101  Q
    |||||||| | ||||| ||||| ||||||||| | ||||||||| |||||| ||||||||||||||||||| ||| ||||||| |||||||| | |||||    
T  40541602 tcaaaatcgggactttacttcaagtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttattcaaggacttctgtag 40541701  T
Q  102 aatcgata 109  Q
    ||||||||    
T  40541702 aatcgata 40541709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 17566443 - 17566313
Alignment:
Q  4 aaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaa 103  Q
    |||||||| | ||| ||||||||| |||||||| ||||||||||  | | ||||||| |||||||||||||||| |||||||||||  || |||||||||    
T  17566443 aaaatcaggattttgcttcaggtcaaaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtagaa 17566344  T
Q  104 tcgatagaggaatttgtaaaatcgcaatcaa 134  Q
      |||| | ||| ||||||||||||||||||    
T  17566343 cagatataagaaattgtaaaatcgcaatcaa 17566313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 151
Target Start/End: Original strand, 15761192 - 15761289
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    |||||||||||||  |||||||||||||||||||||  || ||||||||||||||| | ||| | |||||||||||||||||| | ||||||||||||    
T  15761192 gtaaaatcgcaatataaatcgaaggattttactcaattacttttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgatggattttacc 15761289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 25 - 105
Target Start/End: Complemental strand, 7262086 - 7262006
Alignment:
Q  25 gtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatc 105  Q
    ||||||||| | ||||||||| |||||| |||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  7262086 gtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattaaaggattttactcaaggacttttgtagaatc 7262006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 22910148 - 22910232
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||| ||||||||||||||||||||||| || |||| ||||| ||||||||||||| |||||||||| |||||||| ||||||||    
T  22910148 ctaagtatatgttataaatggtatatagtcataaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggattt 22910232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 35 - 102
Target Start/End: Original strand, 27836114 - 27836181
Alignment:
Q  35 aatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtaga 102  Q
    |||||||||||| ||| | |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27836114 aatagcaaaattaggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtaga 27836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 27836410 - 27836494
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    ||||||| |||||||||||||||||||| || ||||||||||||||||||||||| ||||||| | | ||||||| |||| ||||    
T  27836410 ctaaatacatgttataaatggtatatagtcataaatgacttagtttataagaaattgtaaaattgtaatcaaaattgatgaattt 27836494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 168 - 252
Target Start/End: Original strand, 3094189 - 3094283
Alignment:
Q  168 ctaaatatatgttataaatggtatatagccacaaatgacttagtttat----------aagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||          || |||||||||||||||| |||||||||||||||||    
T  3094189 ctaaatatatgttataaatggtatatagtcataaatgacttagtttatataaaaaaaaaaaaaatcgtaaaatcgcaatcaaaatcgatggattt 3094283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 19 - 135
Target Start/End: Complemental strand, 15231951 - 15231835
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaattt 118  Q
    ||||| |||||||| ||| |||||||| |  | | ||||||||||||  ||||||| | ||||||||||||  || ||||||||||||||| |  || ||    
T  15231951 cttcaagtcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaactaaaatcgtacgattttactcaactacttttgtagaatcgatataaaaaatt 15231852  T
Q  119 gtaaaatcgcaatcaaa 135  Q
    |||||||||||||||||    
T  15231851 gtaaaatcgcaatcaaa 15231835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 169 - 244
Target Start/End: Original strand, 6292289 - 6292364
Alignment:
Q  169 taaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcg 244  Q
    ||||||||| |||||||||||||||||  | ||||||||||| |||||| |||| |||| | |||| |||||||||    
T  6292289 taaatatattttataaatggtatatagtgataaatgacttagattataataaattgtaagaccgcaatcaaaatcg 6292364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 213 - 252
Target Start/End: Original strand, 29384200 - 29384239
Alignment:
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  29384200 tataagaaatcgtaaaatcgcaatcaaaatcgatggattt 29384239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 22910037 - 22910118
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaa 135  Q
    |||||||||||| | |||| ||||||||||| ||||  |  ||||||||||||||| | ||| | |||||||||||||||||    
T  22910037 gtaaaatcgcaaccgaaattgaaggattttattcaactatttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaa 22910118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 213 - 252
Target Start/End: Complemental strand, 17647238 - 17647199
Alignment:
Q  213 tataagaaatcgtaaaatcgcagtcaaaatcgatggattt 252  Q
    |||||||||| ||||||||||| |||||||||||||||||    
T  17647238 tataagaaattgtaaaatcgcaatcaaaatcgatggattt 17647199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 17647229 - 17647197
Alignment:
Q  52 ttgtaaaatcgcaatcaaaatcgaaggatttta 84  Q
    |||||||||||||||||||||||| ||||||||    
T  17647229 ttgtaaaatcgcaatcaaaatcgatggatttta 17647197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 99; Significance: 6e-49; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 13 - 151
Target Start/End: Original strand, 56218 - 56356
Alignment:
Q  13 acttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagag 112  Q
    ||||| ||||||||||||||||||||||||||| | ||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  56218 actttacttcaggtcgaaagggaatagcaaaatcgagacatctaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatatag 56317  T
Q  113 gaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||| |||||||||||||||||||| | ||||||||||||    
T  56318 gaaattgtaaaatcgcaatcaaaatcgatggattttacc 56356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 176 - 230
Target Start/End: Original strand, 58736 - 58790
Alignment:
Q  176 atgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaat 230  Q
    ||||||||| |||||||||| || |||||| ||||||||||||||||||||||||    
T  58736 atgttataagtggtatatagtcataaatgatttagtttataagaaatcgtaaaat 58790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 33 - 252
Target Start/End: Original strand, 7268 - 7485
Alignment:
Q  33 ggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatc 132  Q
    ||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||| || ||||| |||| |||| ||||| ||||| ||||||||||    
T  7268 ggaatagcaaaatcgagacttgtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaattgtataatcgcaatc 7367  T
Q  133 aaaaacaatggattttaccnnnnnnnnnnnnnnttctaaatatatgttataaatggtatatagccacaaatgacttagtttataagaaatcgtaaaatcg 232  Q
    |||| | ||| ||||||||              | ||||||||||||| ||| |||||||||  || |||| |||| |||||||||||||||||||||||    
T  7368 aaaatcgatgaattttacc--aaaaaacaataatactaaatatatgttctaattggtatatattcataaattacttcgtttataagaaatcgtaaaatcg 7465  T
Q  233 cagtcaaaatcgatggattt 252  Q
    || | |||||||||| ||||    
T  7466 caattaaaatcgatgaattt 7485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 52 - 252
Target Start/End: Original strand, 93537 - 93736
Alignment:
Q  52 ttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    ||||||||||| ||||||||||||||||||||| ||||  || ||||||||||||||| |  || | |||||||||||||||||| | ||||||||||||    
T  93537 ttgtaaaatcgtaatcaaaatcgaaggattttattcaactacttttgtagaatcgatataataaatcgtaaaatcgcaatcaaaatcgatggattttacc 93636  T
Q  152 nnnnnnnnnnnnnnttctaaatatatgttataaatggtata-tagccacaaatgacttagtttataagaaatcgtaaaatcgcagtcaaaatcgatggat 250  Q
                  | ||||||||||||||| ||| ||||| ||| || ||| |||||| |||| ||||||||||||||||||| |||||||||||||||    
T  93637 --aaaaacaaatattactaaatatatgttatgaatcgtatattagtcataaacgacttaatttaaaagaaatcgtaaaatcgcaatcaaaatcgatggat 93734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 14 - 108
Target Start/End: Original strand, 14720 - 14814
Alignment:
Q  14 cttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgat 108  Q
    |||| ||||| ||||||| ||| ||||||||| |||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||    
T  14720 ctttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttattcaaagacttttgtagaatcgat 14814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 57; Significance: 7e-24; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 55 - 151
Target Start/End: Original strand, 8794 - 8890
Alignment:
Q  55 taaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggattttacc 151  Q
    |||||||| ||||||||||||||||||||||||||  || |||||||||| |||| | ||| |||||||||||||||||||| | ||||||||||||    
T  8794 taaaatcgtaatcaaaatcgaaggattttactcaactacttttgtagaatagatataagaacttgtaaaatcgcaatcaaaatcgatggattttacc 8890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 50 - 85
Target Start/End: Original strand, 8854 - 8889
Alignment:
Q  50 acttgtaaaatcgcaatcaaaatcgaaggattttac 85  Q
    |||||||||||||||||||||||||| |||||||||    
T  8854 acttgtaaaatcgcaatcaaaatcgatggattttac 8889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 38308 - 38414
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| ||||| ||||||||| ||||||||||| |||||| ||||||| |||||| | |||||||||||||||||| |||| ||||||    
T  38308 gtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgggactcgtaaaattgcaatc-agatcgaaggattttactcatggacttttgta 38406  T
Q  101 gaatcgat 108  Q
    ||||||||    
T  38407 gaatcgat 38414  T

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Target: scaffold0534 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 1015 - 885
Alignment:
Q  4 aaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaa 103  Q
    |||||||| | ||| ||||||||| |||||||| ||||||||||  | | ||||||| |||||||||||||||| |||||||||||  || |||||||||    
T  1015 aaaatcaggattttgcttcaggtcaaaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactacttttgtagaa 916  T
Q  104 tcgatagaggaatttgtaaaatcgcaatcaa 134  Q
      |||| | ||| ||||||||||||||||||    
T  915 cagatataagaaattgtaaaatcgcaatcaa 885  T

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Target: scaffold0510 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 3 - 131
Alignment:
Q  19 cttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaattt 118  Q
    |||||||||||| | ||| |||||||| |  | | ||||||||| || |||||||||||||||||||||||  || ||||||||||||||| | ||| ||    
T  3 cttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactac-tttgtagaatcgatataagaaatt 101  T
Q  119 gtaaaatcgcaatcaaaaacaatggatttt 148  Q
    |||||||| ||||||||| | |||||||||    
T  102 gtaaaatctcaatcaaaatcgatggatttt 131  T

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Target: scaffold0027 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 48 - 108
Target Start/End: Original strand, 132943 - 133003
Alignment:
Q  48 ggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgat 108  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  132943 ggactcgtaaaatcgcaatcaaaatcgaaggattttcctcaaggacttttgtagaatcgat 133003  T

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Target: scaffold2084 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 93
Target Start/End: Complemental strand, 175 - 84
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 93  Q
    |||||||| | ||||| ||||| ||| ||||||| ||||||||| |||||| ||||||| | ||| ||||||||||||||||||||||||||    
T  175 tcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaattgtaattaaaatcgaaggattttactcaaggac 84  T

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Target: scaffold0182 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 24733 - 24646
Alignment:
Q  2 tcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaa 89  Q
    ||||||||| |||||| ||||| ||||||||||| ||||||||| |||||| ||||||| | |||||||||| || ||||||||||||    
T  24733 tcaaaatcaaaactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaattgtaatcaaaatcaaaagattttactcaa 24646  T

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Target: scaffold0526 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 25 - 114
Target Start/End: Complemental strand, 8480 - 8391
Alignment:
Q  25 gtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    ||||||||||| ||| ||||||||||||  |||||| ||| |||||||||||||||||||||||||||  | |||||||| |||| ||||    
T  8480 gtcgaaagggagtagtaaaattgggactcataaaattgcagtcaaaatcgaaggattttactcaaggagttgtgtagaattgatatagga 8391  T

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Target: scaffold0061 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 76090 - 76196
Alignment:
Q  1 gtcaaaatcagaacttttcttcaggtcgaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgta 100  Q
    ||||||||| | ||||| ||||  ||||||||| |||||||||   |||||| ||||||| ||||| || ||||||||||||||||||| ||| ||||||    
T  76090 gtcaaaatcgggactttacttccagtcgaaaggaaatagcaaacccgggactcgtaaaattgcaat-aagatcgaaggattttactcaaagacttttgta 76188  T
Q  101 gaatcgat 108  Q
    ||||||||    
T  76189 gaatcgat 76196  T

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Target: scaffold0048 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 55 - 149
Target Start/End: Original strand, 48497 - 48591
Alignment:
Q  55 taaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggatttta 149  Q
    ||||||| |||||||||||||||||||||||| ||  || ||||||||||||||| | ||| | |||||||||| ||||||| | ||||| ||||    
T  48497 taaaatctcaatcaaaatcgaaggattttacttaactacttttgtagaatcgataaaagaagtcgtaaaatcgcgatcaaaatcgatggacttta 48591  T

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Target: scaffold0048; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 149
Target Start/End: Original strand, 61148 - 61243
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagaggaatttgtaaaatcgcaatcaaaaacaatggatttta 149  Q
    |||||||| ||||||||||||||| |||||||| ||  || ||||||||||||||| | ||| | ||||||||| || ||||| | ||||| ||||    
T  61148 gtaaaatcacaatcaaaatcgaagaattttacttaactacttttgtagaatcgatatatgaaatcgtaaaatcgtaaccaaaatcgatggacttta 61243  T

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Target: scaffold0150 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 33235 - 33178
Alignment:
Q  52 ttgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    |||||||||||||||||||||||||| ||||||||||   || |||||||||||||||    
T  33235 ttgtaaaatcgcaatcaaaatcgaagaattttactcacttacttttgtagaatcgata 33178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 54 - 109
Target Start/End: Complemental strand, 145883 - 145828
Alignment:
Q  54 gtaaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgata 109  Q
    ||||||| |||||||||||||||||||||||||||   || |||||||||||||||    
T  145883 gtaaaatagcaatcaaaatcgaaggattttactcacttacttttgtagaatcgata 145828  T

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Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 114
Target Start/End: Complemental strand, 142923 - 142864
Alignment:
Q  55 taaaatcgcaatcaaaatcgaaggattttactcaaggacatttgtagaatcgatagagga 114  Q
    |||||||||||| ||||| |||||||||||||||||||  |||||||||| |||| ||||    
T  142923 taaaatcgcaattaaaattgaaggattttactcaaggagttttgtagaatagatatagga 142864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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