View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6729_low_17 (Length: 303)

Name: NF6729_low_17
Description: NF6729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6729_low_17
NF6729_low_17
[»] chr8 (5 HSPs)
chr8 (2-289)||(19492127-19492411)
chr8 (97-186)||(26402624-26402711)
chr8 (125-188)||(10688561-10688623)
chr8 (125-188)||(33037230-33037292)
chr8 (109-190)||(29796834-29796913)
[»] chr1 (13 HSPs)
chr1 (2-289)||(41360370-41360654)
chr1 (5-130)||(13138422-13138547)
chr1 (244-289)||(41334505-41334550)
chr1 (84-218)||(776761-776890)
chr1 (102-186)||(47703333-47703415)
chr1 (84-191)||(50167694-50167796)
chr1 (125-188)||(41391180-41391242)
chr1 (126-188)||(25444535-25444596)
chr1 (125-188)||(19360855-19360917)
chr1 (97-130)||(40816287-40816320)
chr1 (50-94)||(13138399-13138443)
chr1 (116-144)||(28220803-28220831)
chr1 (123-170)||(44023339-44023384)
[»] chr2 (5 HSPs)
chr2 (5-130)||(2837561-2837686)
chr2 (87-196)||(31056649-31056756)
chr2 (119-185)||(19344999-19345064)
chr2 (74-128)||(1344089-1344143)
chr2 (107-144)||(28568727-28568763)
[»] chr7 (9 HSPs)
chr7 (5-128)||(31105819-31105942)
chr7 (126-188)||(20000330-20000391)
chr7 (126-188)||(24265620-24265681)
chr7 (125-188)||(12397487-12397549)
chr7 (125-188)||(18409394-18409456)
chr7 (125-188)||(21640418-21640480)
chr7 (126-188)||(16880656-16880717)
chr7 (94-139)||(4175347-4175390)
chr7 (110-144)||(11084206-11084240)
[»] chr6 (6 HSPs)
chr6 (5-125)||(14522154-14522273)
chr6 (244-289)||(20901421-20901466)
chr6 (119-188)||(33335372-33335440)
chr6 (244-289)||(20919884-20919929)
chr6 (125-188)||(11857562-11857624)
chr6 (125-188)||(14741869-14741931)
[»] chr3 (10 HSPs)
chr3 (5-130)||(21354044-21354168)
chr3 (119-188)||(32476061-32476129)
chr3 (125-188)||(1306599-1306661)
chr3 (126-188)||(2676517-2676578)
chr3 (126-188)||(8512823-8512884)
chr3 (125-187)||(23198525-23198586)
chr3 (123-188)||(3327785-3327849)
chr3 (109-188)||(4386445-4386522)
chr3 (125-188)||(22172605-22172667)
chr3 (125-188)||(28503262-28503324)
[»] chr4 (4 HSPs)
chr4 (97-186)||(3792432-3792519)
chr4 (125-188)||(9228629-9228691)
chr4 (123-186)||(18856302-18856364)
chr4 (149-188)||(16628289-16628329)
[»] scaffold0197 (2 HSPs)
scaffold0197 (119-188)||(18606-18674)
scaffold0197 (126-188)||(13727-13788)
[»] chr5 (9 HSPs)
chr5 (119-188)||(31401289-31401357)
chr5 (84-128)||(16642618-16642662)
chr5 (119-185)||(33768761-33768826)
chr5 (124-188)||(37560890-37560953)
chr5 (125-188)||(27445561-27445623)
chr5 (125-188)||(43592849-43592911)
chr5 (125-188)||(43625643-43625705)
chr5 (125-187)||(16409021-16409082)
chr5 (126-188)||(28807019-28807080)
[»] scaffold0491 (1 HSPs)
scaffold0491 (125-187)||(9303-9364)
[»] scaffold0259 (1 HSPs)
scaffold0259 (126-188)||(1682-1743)


Alignment Details
Target: chr8 (Bit Score: 270; Significance: 1e-151; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 2 - 289
Target Start/End: Original strand, 19492127 - 19492411
Alignment:
Q  2 tctcatcgtactacgatttttccagaacctacacaaaactgaaccatccaaaatcgtactacgatgcctgccatcgtactatgatttttccagaacttca 101  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19492127 tctcatcgtactacgatttttccagaacctacacaaaaccgaaccatccaaaatcgtactacgatgcctgccatcgtactatgatttttccagaacttca 19492226  T
Q  102 acatccaaattttgagtcaattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaattaaccatcaaccaccattcttctcttcata 201  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19492227 acatccaaattttgagtcaattttcaacatttctccaccttga---ctctaatttgatggtgatgtcaattaaccatcaaccaccattcttctcttcata 19492323  T
Q  202 ttccttgcatccaactataccttacattccatttctccaccttcgaatttaactatatctttccaccagcctcgtaaattttctgatg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19492324 ttccttgcatccaactataccttacattccatttctccaccttcgaatttaactatatctttccaccagcctcgtaaattttctgatg 19492411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 26402711 - 26402624
Alignment:
Q  97 cttcaacatccaaattttgagtcaattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccacc 186  Q
    ||||||||||||| | ||||||||||||  |||||||||||||||||   ||||||| ||| ||||||||| || ||||||||||||||||    
T  26402711 cttcaacatccaattcttgagtcaatttataacatttctccaccttg---actctaaattggtggtgatgtaaatttaaccatcaaccacc 26402624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 10688623 - 10688561
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  10688623 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 10688561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 33037292 - 33037230
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  33037292 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 33037230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 190
Target Start/End: Original strand, 29796834 - 29796913
Alignment:
Q  109 aattttgagtcaattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccattc 190  Q
    ||||||||| ||||| |||| ||||||||||||||    |||||| || | ||||||||||| |||||||||||| |||||||    
T  29796834 aattttgagacaattctcaatatttctccaccttg---gctctaaatttacggtgatgtcaatttaaccatcaactaccattc 29796913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 270; Significance: 1e-151; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 2 - 289
Target Start/End: Complemental strand, 41360654 - 41360370
Alignment:
Q  2 tctcatcgtactacgatttttccagaacctacacaaaactgaaccatccaaaatcgtactacgatgcctgccatcgtactatgatttttccagaacttca 101  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41360654 tctcatcgtactacgatttttccagaacctacacaaaaccgaaccatccaaaatcgtactacgatgcctgccatcgtactatgatttttccagaacttca 41360555  T
Q  102 acatccaaattttgagtcaattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaattaaccatcaaccaccattcttctcttcata 201  Q
    |||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41360554 acatccaaattttgagtcaattttcaacatttctccaccttga---ctctaatttgatggtgatgtcaattaaccatcaaccaccattcttctcttcata 41360458  T
Q  202 ttccttgcatccaactataccttacattccatttctccaccttcgaatttaactatatctttccaccagcctcgtaaattttctgatg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41360457 ttccttgcatccaactataccttacattccatttctccaccttcgaatttaactatatctttccaccagcctcgtaaattttctgatg 41360370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 13138422 - 13138547
Alignment:
Q  5 catcgtactacgatttttccagaacctacacaaaactgaaccatccaaaatcgtactacgatgcctgccatcgtactatgatttttccagaacttcaaca 104  Q
    ||||||||||||||||||||||  ||||| |||| |||||| | |||||||| ||||||||||  || |||||||||| || ||||||||||||||||||    
T  13138422 catcgtactacgatttttccagtgcctacgcaaacctgaactacccaaaatcatactacgatgtttgtcatcgtactacgacttttccagaacttcaaca 13138521  T
Q  105 tccaaattttgagtcaattttcaaca 130  Q
    ||||||||||||||  ||||||||||    
T  13138522 tccaaattttgagtagattttcaaca 13138547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 41334550 - 41334505
Alignment:
Q  244 tcgaatttaactatatctttccaccagcctcgtaaattttctgatg 289  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  41334550 tcgaatttaactatttctttccaccagcctcgtaaattttctgatg 41334505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 218
Target Start/End: Complemental strand, 776890 - 776761
Alignment:
Q  84 gatttttccagaacttcaacatccaaattttgagtcaattttcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaac 182  Q
    |||||||||| ||||||||| ||  ||||||||| ||  |||||||||||||||||||||   ||||||| ||||||||||||  |  ||||||||||||    
T  776890 gatttttcca-aacttcaacttc--aattttgagacacatttcaacatttctccaccttg---actctaaattgatggtgatggaactttaaccatcaac 776797  T
Q  183 caccattcttctctt-catattccttgcatccaacta 218  Q
    ||||||||| || || ||| |||||||||||||||||    
T  776796 caccattctccttttgcat-ttccttgcatccaacta 776761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 102 - 186
Target Start/End: Complemental strand, 47703415 - 47703333
Alignment:
Q  102 acatccaaattttgagtcaattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccacc 186  Q
    |||||||| | |||||||||||| |||||||| |||||||||   ||||||| ||| |||||||||||| ||||||||||||||||    
T  47703415 acatccaattcttgagtcaatttacaacatttatccaccttg---actctaaattggtggtgatgtcaatttaaccatcaaccacc 47703333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 84 - 191
Target Start/End: Original strand, 50167694 - 50167796
Alignment:
Q  84 gatttttccagaacttcaacatccaaattttgagtcaattttcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaac 182  Q
    |||||||||| |||||||||||   ||||||||| ||  |||||||||||||||||||||   ||||||| ||||||||||||  |  ||||||||||||    
T  50167694 gatttttcca-aacttcaacatt--aattttgagacacatttcaacatttctccaccttg---actctaaattgatggtgatgaaactttaaccatcaac 50167787  T
Q  183 caccattct 191  Q
    |||||||||    
T  50167788 caccattct 50167796  T

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Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 41391180 - 41391242
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  41391180 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 41391242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 25444596 - 25444535
Alignment:
Q  126 caacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  25444596 caacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 25444535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 19360917 - 19360855
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  | ||||||| |||||||||||  ||||||||||||||||||    
T  19360917 tcaacatttctccaccttgact--tataatttggtggtgatgtcagtttaaccatcaaccaccat 19360855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 97 - 130
Target Start/End: Complemental strand, 40816320 - 40816287
Alignment:
Q  97 cttcaacatccaaattttgagtcaattttcaaca 130  Q
    ||||||||||||| ||||||||||||||||||||    
T  40816320 cttcaacatccaatttttgagtcaattttcaaca 40816287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 94
Target Start/End: Original strand, 13138399 - 13138443
Alignment:
Q  50 caaaatcgtactacgatgcctgccatcgtactatgatttttccag 94  Q
    |||||||||||||||||  || ||||||||||| |||||||||||    
T  13138399 caaaatcgtactacgatatctcccatcgtactacgatttttccag 13138443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 116 - 144
Target Start/End: Original strand, 28220803 - 28220831
Alignment:
Q  116 agtcaattttcaacatttctccaccttga 144  Q
    |||||||||||||||||||||||||||||    
T  28220803 agtcaattttcaacatttctccaccttga 28220831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 123 - 170
Target Start/End: Complemental strand, 44023384 - 44023339
Alignment:
Q  123 tttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa 170  Q
    ||||||||||||||||||||||  | ||||||||| ||||||||||||    
T  44023384 tttcaacatttctccaccttga--attctaatttggtggtgatgtcaa 44023339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 7e-46; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 5 - 130
Target Start/End: Complemental strand, 2837686 - 2837561
Alignment:
Q  5 catcgtactacgatttttccagaacctacacaaaactgaaccatccaaaatcgtactacgatgcctgccatcgtactatgatttttccagaacttcaaca 104  Q
    |||||||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||| || ||||||||||| |||||||||| ||||||||||    
T  2837686 catcgtactacgatttttccagtacctacacaaacttgaaccatccaaaatcgtactacgatgtcttccatcgtactacgatttttccataacttcaaca 2837587  T
Q  105 tccaaattttgagtcaattttcaaca 130  Q
    |||||||||| |||||||||||||||    
T  2837586 tccaaattttaagtcaattttcaaca 2837561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 196
Target Start/End: Original strand, 31056649 - 31056756
Alignment:
Q  87 ttttccagaacttcaacatccaaattttgagtcaattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccac 185  Q
    |||| |||| ||||||||||||| | |||||||||||||||||||||||||||||||   ||||||| ||| |||||||||||| |||| ||||||||||    
T  31056649 ttttacagagcttcaacatccaattcttgagtcaattttcaacatttctccaccttg---actctaaattggtggtgatgtcaatttaatcatcaaccac 31056745  T
Q  186 cattcttctct 196  Q
    | |||| ||||    
T  31056746 ctttctgctct 31056756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 19344999 - 19345064
Alignment:
Q  119 caattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccac 185  Q
    |||||||||||||||||||||||||| |  ||||||||| |||||||||||| |||||||||||||||    
T  19344999 caattttcaacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccac 19345064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 74 - 128
Target Start/End: Complemental strand, 1344143 - 1344089
Alignment:
Q  74 atcgtactatgatttttccagaacttcaacatccaaattttgagtcaattttcaa 128  Q
    ||||||||| ||||||| || ||||| ||||| |||| |||||||||||||||||    
T  1344143 atcgtactacgattttttcaaaacttaaacattcaaactttgagtcaattttcaa 1344089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 144
Target Start/End: Original strand, 28568727 - 28568763
Alignment:
Q  107 caaattttgagtcaattttcaacatttctccaccttga 144  Q
    |||||||||||||||||| |||||||||||||||||||    
T  28568727 caaattttgagtcaattt-caacatttctccaccttga 28568763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 31105819 - 31105942
Alignment:
Q  5 catcgtactacgatttttccagaacctacacaaaactgaaccatccaaaatcgtactacgatgcctgccatcgtactatgatttttccagaacttcaaca 104  Q
    ||||||||| ||||||||||||  |||||||||| |||||| || ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||    
T  31105819 catcgtactgcgatttttccagtgcctacacaaacctgaactattcaaaatcgtactacgatgcctgcaatcgtactacgatttttccagaacttcaaca 31105918  T
Q  105 tccaaattttgagtcaattttcaa 128  Q
    ||||||||||||||||||||||||    
T  31105919 tccaaattttgagtcaattttcaa 31105942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 20000330 - 20000391
Alignment:
Q  126 caacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  20000330 caacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 20000391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 24265681 - 24265620
Alignment:
Q  126 caacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  24265681 caacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 24265620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 12397487 - 12397549
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  12397487 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 12397549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 18409394 - 18409456
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    |||||||||||| ||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  18409394 tcaacatttctctaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 18409456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 21640418 - 21640480
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  21640418 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 21640480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 16880656 - 16880717
Alignment:
Q  126 caacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    ||||||||||||||||||| |  ||||| ||| |||||||||||| ||||||||||||||||||    
T  16880656 caacatttctccaccttgact--tctaaattggtggtgatgtcaatttaaccatcaaccaccat 16880717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 94 - 139
Target Start/End: Original strand, 4175347 - 4175390
Alignment:
Q  94 gaacttcaacatccaaattttgagtcaattttcaacatttctccac 139  Q
    |||||||||||||  ||||||||||||||| |||||||||||||||    
T  4175347 gaacttcaacatc--aattttgagtcaattatcaacatttctccac 4175390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 144
Target Start/End: Complemental strand, 11084240 - 11084206
Alignment:
Q  110 attttgagtcaattttcaacatttctccaccttga 144  Q
    ||||||||||||||||||||| |||||||||||||    
T  11084240 attttgagtcaattttcaacaattctccaccttga 11084206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 77; Significance: 9e-36; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 14522154 - 14522273
Alignment:
Q  5 catcgtactacgatttttccagaacctacacaaaactgaaccatccaaaatcgtactacgatgcctgccatcgtactatgatttttccagaacttcaaca 104  Q
    ||||||||||| |||||||||   |||||||||| |||||||||||||||||||||||||||||||||||||||||||  | ||||||| |||||||| |    
T  14522154 catcgtactacaatttttccaatgcctacacaaacctgaaccatccaaaatcgtactacgatgcctgccatcgtacta-caattttccataacttcaata 14522252  T
Q  105 tccaaattttgagtcaatttt 125  Q
    |||||||||||||||||||||    
T  14522253 tccaaattttgagtcaatttt 14522273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 20901466 - 20901421
Alignment:
Q  244 tcgaatttaactatatctttccaccagcctcgtaaattttctgatg 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20901466 tcgaatttaactatatctttccaccagcctcgtaaattttctgatg 20901421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 33335440 - 33335372
Alignment:
Q  119 caattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaat-taaccatcaaccaccat 188  Q
    |||||||||||||||||||||||||| |  ||||||||| ||||||||||||| |||||||||||||||||    
T  33335440 caattttcaacatttctccaccttgact--tctaatttggtggtgatgtcaatataaccatcaaccaccat 33335372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 244 - 289
Target Start/End: Complemental strand, 20919929 - 20919884
Alignment:
Q  244 tcgaatttaactatatctttccaccagcctcgtaaattttctgatg 289  Q
    |||||||||||||| |||||||||||||||||||||||||||||||    
T  20919929 tcgaatttaactatttctttccaccagcctcgtaaattttctgatg 20919884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 11857562 - 11857624
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  11857562 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 11857624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 14741931 - 14741869
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  14741931 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 14741869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 8e-27; HSPs: 10)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 5 - 130
Target Start/End: Original strand, 21354044 - 21354168
Alignment:
Q  5 catcgtactacgatttttccagaacctacacaaaactgaaccatccaaaatcgtactacgatgcctgccatcgtactatgatttttccagaacttcaaca 104  Q
    ||||||||||||||||| ||||  || |||| |  |||||||||||||||||||||||| |||||   ||||||||||  ||||||||| ||||||||||    
T  21354044 catcgtactacgatttt-ccagtgccaacactagcctgaaccatccaaaatcgtactaccatgccctgcatcgtactacaatttttccaaaacttcaaca 21354142  T
Q  105 tccaaattttgagtcaattttcaaca 130  Q
    |||||||||| |||||||||||||||    
T  21354143 tccaaattttaagtcaattttcaaca 21354168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 32476061 - 32476129
Alignment:
Q  119 caattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    |||| ||||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  32476061 caatcttcaacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 32476129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 1306599 - 1306661
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  1306599 tcaacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 1306661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 2676578 - 2676517
Alignment:
Q  126 caacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  2676578 caacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 2676517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 188
Target Start/End: Original strand, 8512823 - 8512884
Alignment:
Q  126 caacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  8512823 caacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 8512884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 23198525 - 23198586
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccacca 187  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||| |||||||||||||||||    
T  23198525 tcaacatttctccaccttgact--tctaatttgttggtgatgtcaatttaaccatcaaccacca 23198586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 3327849 - 3327785
Alignment:
Q  123 tttcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  3327849 tttcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 3327785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 109 - 188
Target Start/End: Complemental strand, 4386522 - 4386445
Alignment:
Q  109 aattttgagtcaattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    |||||||||||| | | ||||||||||||||||||   ||||||| ||| || ||||||||| ||||||||||||||||||    
T  4386522 aattttgagtcagtatacaacatttctccaccttg---actctaaattggtgatgatgtcaatttaaccatcaaccaccat 4386445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 22172667 - 22172605
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtcaat-taaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| ||||||| ||||| |||||||||||||||||    
T  22172667 tcaacatttctccaccttgact--tctaatttggtggtgatatcaatataaccatcaaccaccat 22172605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 28503324 - 28503262
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  28503324 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 28503262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 3792519 - 3792432
Alignment:
Q  97 cttcaacatccaaattttgagtcaattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccacc 186  Q
    ||||||||||||| | |||||| ||||||||||||||||||||||||   ||||||| ||  |||||||||||| ||||||||||||||||    
T  3792519 cttcaacatccaattcttgagttaattttcaacatttctccaccttg---actctaaattagtggtgatgtcaatttaaccatcaaccacc 3792432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Complemental strand, 9228691 - 9228629
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  9228691 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 9228629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 123 - 186
Target Start/End: Original strand, 18856302 - 18856364
Alignment:
Q  123 tttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccacc 186  Q
    |||||||||||||||||||||| |  ||||||||| |||||||| ||| ||||||||||||||||    
T  18856302 tttcaacatttctccaccttgact--tctaatttggtggtgatgccaatttaaccatcaaccacc 18856364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 149 - 188
Target Start/End: Complemental strand, 16628329 - 16628289
Alignment:
Q  149 tctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    ||||||||| |||||||||||| ||||||||||||||||||    
T  16628329 tctaatttggtggtgatgtcaatttaaccatcaaccaccat 16628289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 18674 - 18606
Alignment:
Q  119 caattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    |||||||||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  18674 caattttcaacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 18606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 13788 - 13727
Alignment:
Q  126 caacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  13788 caacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 13727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 44; Significance: 5e-16; HSPs: 9)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 31401357 - 31401289
Alignment:
Q  119 caattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    |||||||||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  31401357 caattttcaacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 31401289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 84 - 128
Target Start/End: Original strand, 16642618 - 16642662
Alignment:
Q  84 gatttttccagaacttcaacatccaaattttgagtcaattttcaa 128  Q
    |||||||||||||||| ||||||||||||||||||||||||||||    
T  16642618 gatttttccagaactttaacatccaaattttgagtcaattttcaa 16642662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 33768761 - 33768826
Alignment:
Q  119 caattttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccac 185  Q
    |||||||||||||||||||||||||| |  ||||||||| |||||||||||| |||||||||||||||    
T  33768761 caattttcaacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccac 33768826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 37560953 - 37560890
Alignment:
Q  124 ttcaacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    ||||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  37560953 ttcaacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 37560890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 27445561 - 27445623
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  27445561 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 27445623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 43592849 - 43592911
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  43592849 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 43592911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 188
Target Start/End: Original strand, 43625643 - 43625705
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  43625643 tcaacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 43625705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 187
Target Start/End: Complemental strand, 16409082 - 16409021
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccacca 187  Q
    |||||||||||||||||||| |  ||||||||| |||||||||||  |||||||||||||||||    
T  16409082 tcaacatttctccaccttgact--tctaatttggtggtgatgtcactttaaccatcaaccacca 16409021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 28807080 - 28807019
Alignment:
Q  126 caacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccaccat 188  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||  ||||||||||||||||||    
T  28807080 caacatttctccaccttgact--tctaatttggtggtgatgtcagtttaaccatcaaccaccat 28807019  T

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Target: scaffold0491 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 125 - 187
Target Start/End: Original strand, 9303 - 9364
Alignment:
Q  125 tcaacatttctccaccttgagtactctaatttgatggtgatgtca-attaaccatcaaccacca 187  Q
    |||||||||||||||||||| |  |||||||||||||||||||||  |||||||||||||||||    
T  9303 tcaacatttctccaccttgact--tctaatttgatggtgatgtcactttaaccatcaaccacca 9364  T

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Target: scaffold0259 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 126 - 188
Target Start/End: Complemental strand, 1743 - 1682
Alignment:
Q  126 caacatttctccaccttgagtactctaatttgatggtgatgtcaa-ttaaccatcaaccaccat 188  Q
    ||||||||||||||||||| |  ||||||||| |||||||||||| ||||||||||||||||||    
T  1743 caacatttctccaccttgact--tctaatttggtggtgatgtcaatttaaccatcaaccaccat 1682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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