View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6730_low_10 (Length: 371)
Name: NF6730_low_10
Description: NF6730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6730_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 336; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 16 - 371
Target Start/End: Original strand, 36367339 - 36367694
Alignment:
| Q |
16 |
acatcattcctctccccaacacatgacataatttgcactacatacgttacaagttacaagttaaaataacagccaacccaattttcccaatctctcagct |
115 |
Q |
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| T |
36367339 |
acatcattcctctccccaacacacgacataatttgcactacatacgttacaagttacaagttaaaataacagccaacccaattttcccaatctctcagct |
36367438 |
T |
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| Q |
116 |
acatggtaccaaaagtgtagtagttattaccacaaaactcttctccctacacatttcaataaataccaagtgtttgatgacttaaacttggatctctatt |
215 |
Q |
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| T |
36367439 |
acatggtaccaaaagtgtagtagttattaccacaaaactcttctccctacacatttctataaataccaagtgtttgatgacttaaacttggatctctatt |
36367538 |
T |
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| Q |
216 |
gaccatttatacatgtcctcttgaggaattgggatggagaaggttgtcaacccattttcggagttatagttgaaatcggttttggtgccctctaccgcaa |
315 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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| T |
36367539 |
gaccatttatacatgtcctcttgaggaattgggatggagaaggttgtcaacccattttcggagttatagttgaaatcggttttggtgccatctaccgcaa |
36367638 |
T |
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| Q |
316 |
acttcagcggacgctgggaggagtaaactccaaacttgccccttcctctccctttc |
371 |
Q |
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| T |
36367639 |
acttcagcggacgctgggaggagtaaactccaaacttgccgcttcctctcactttc |
36367694 |
T |
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