View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6730_low_6 (Length: 538)

Name: NF6730_low_6
Description: NF6730
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6730_low_6
NF6730_low_6
[»] chr4 (19 HSPs)
chr4 (4-510)||(50336342-50336848)
chr4 (1-163)||(5534223-5534383)
chr4 (1-137)||(43210137-43210273)
chr4 (1-163)||(12656347-12656507)
chr4 (1-168)||(33990589-33990754)
chr4 (1-100)||(1938473-1938572)
chr4 (1-139)||(41418765-41418903)
chr4 (1-99)||(156993-157091)
chr4 (3-80)||(50008946-50009023)
chr4 (473-521)||(50336846-50336894)
chr4 (95-139)||(22923366-22923410)
chr4 (95-139)||(22928019-22928063)
chr4 (95-139)||(22984298-22984342)
chr4 (95-139)||(22997886-22997930)
chr4 (76-139)||(18486326-18486389)
chr4 (95-137)||(54185655-54185697)
chr4 (82-111)||(50009006-50009035)
chr4 (99-139)||(1939417-1939457)
chr4 (56-92)||(3680044-3680080)
[»] chr1 (10 HSPs)
chr1 (1-162)||(16315274-16315433)
chr1 (1-136)||(30704454-30704589)
chr1 (1-139)||(23941489-23941627)
chr1 (1-81)||(12063472-12063552)
chr1 (6-139)||(36185892-36186025)
chr1 (88-142)||(12063430-12063484)
chr1 (97-139)||(44490725-44490767)
chr1 (95-139)||(7015033-7015077)
chr1 (96-139)||(12068028-12068071)
chr1 (96-163)||(23943653-23943718)
[»] chr7 (5 HSPs)
chr7 (1-139)||(11356192-11356331)
chr7 (1-112)||(23941224-23941335)
chr7 (1-96)||(44221906-44222001)
chr7 (1-74)||(4278521-4278594)
chr7 (50-139)||(44221844-44221933)
[»] chr5 (6 HSPs)
chr5 (5-139)||(20887818-20887952)
chr5 (1-161)||(29195974-29196132)
chr5 (1-162)||(35050398-35050555)
chr5 (8-105)||(32910473-32910570)
chr5 (95-137)||(29195221-29195263)
chr5 (95-139)||(12143830-12143874)
[»] chr8 (4 HSPs)
chr8 (20-163)||(41600952-41601093)
chr8 (1-92)||(22661800-22661891)
chr8 (95-139)||(4412618-4412662)
chr8 (69-139)||(37227008-37227078)
[»] chr2 (4 HSPs)
chr2 (1-139)||(9829491-9829629)
chr2 (95-139)||(19380267-19380311)
chr2 (94-162)||(42242085-42242151)
chr2 (95-139)||(5848138-5848182)
[»] chr3 (7 HSPs)
chr3 (1-116)||(14443867-14443982)
chr3 (1-95)||(30933942-30934036)
chr3 (1-114)||(20518196-20518309)
chr3 (1-53)||(53767164-53767216)
chr3 (84-125)||(53767130-53767171)
chr3 (99-139)||(34436999-34437039)
chr3 (8-60)||(54335587-54335639)
[»] scaffold1050 (1 HSPs)
scaffold1050 (1-92)||(1962-2053)
[»] chr6 (1 HSPs)
chr6 (95-141)||(7527113-7527159)


Alignment Details
Target: chr4 (Bit Score: 471; Significance: 0; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 471; E-Value: 0
Query Start/End: Original strand, 4 - 510
Target Start/End: Original strand, 50336342 - 50336848
Alignment:
Q  4 agtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaaggg 103  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  50336342 agtttggactgatgggttttgtacgaaaacagtaacactgcgtcacttaacctgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaaggg 50336441  T
Q  104 taaatttggaacgacggcagggcgcgagcaaaatgtacagagggtgaagagcaggattctaattaagtgagcacttgacacatatgggtctaaacacatg 203  Q
    ||||||||||||| | |||||||||||||||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  50336442 taaatttggaacggctgcagggcgcgagcaaaatgtgcagagggtggagagcaagattctaattaagtgagcacttgacacatatgggtctaaacacatg 50336541  T
Q  204 ttgattggagtttcaagtatcgactttcttggtccaaattgcaaggaagatagtatcaaatgagaaattgattgatgacttctataggaatttgcatact 303  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50336542 ttgattggagtttcaagtatcgactttcttggtccaaattgcaaggaagatagtatcaaatgagaaattgattgatgacttctataggaatttgcatact 50336641  T
Q  304 gtctttaattccttaataatgatgataatatgaaaaatttgtgagaaatttttaaaataaatttcaaaggttgcatgctcctaataatgtttaaatatgt 403  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50336642 gtctttaattccttaataatgatgataatatgaaaaatttgtgagaaatttttaaaataaatttcaaaggttgcatgctcctaataatgtttaaatatgt 50336741  T
Q  404 acaaaaatgtaaataccacacacaaggttaccagtgattcgtggttgtgttctttggaaaaatcatgtgtttgtaggattaaacctctactttgatgtta 503  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  50336742 acaacaatgtaaataccacacacaaggttaccagtgattcgtggttgtgttctttggaaaaatcatgtgtttgtaggattaaacctctacttttatgtta 50336841  T
Q  504 ttacttt 510  Q
    |||||||    
T  50336842 ttacttt 50336848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 5534223 - 5534383
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    ||||||||| ||| || ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||| |||| ||    
T  5534223 tggagtttgcactaatgggttttgtacgaaaacagtaacactgcgtcacttaacatgcgccgcgtgagttaagttgcgcatcgttacttaagatgcgtaa 5534322  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaatgtacagagggtgaagagcaggattct 163  Q
    |||||||||||||||| | |||||| ||||| ||||||| |  |||||| |||||||||||||    
T  5534323 gggtaaatttggaacggctgcagggtgcgagtaaaatgtgc--agggtggagagcaggattct 5534383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 43210137 - 43210273
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    |||||||||||||||| ||||||||||||||||||||| | ||||||||||||||||| |||||||||||||| || ||| |||||||||||||||||||    
T  43210137 tggagtttggactgatgggttttgtacgaaaacagtaataatgcgtcacttaacttgcactgcgtgagttaaggtgtgcagcgttacttaaggtgcgcaa 43210236  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaat 137  Q
    ||||||||||| |||| | ||||||||||||||||||    
T  43210237 gggtaaatttgaaacggctgcagggcgcgagcaaaat 43210273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 12656507 - 12656347
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    |||||||||||||||| | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||| |||||| || |||    
T  12656507 tggagtttggactgatggattttgtacgaaaacagtaacactgcgtcacttaacatgcgctgcgtgagttaagttacgcatcattatttaaggcgcacaa 12656408  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaatgtacagagggtgaagagcaggattct 163  Q
    |||||||||| ||||| | |||||| ||||||||||||| |  |||||| |||||||||||||    
T  12656407 gggtaaatttagaacggctgcagggtgcgagcaaaatgtgc--agggtggagagcaggattct 12656347  T

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Target: chr4; HSP #5
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 33990754 - 33990589
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||  |||||||||||||||||||    
T  33990754 tggagtttggactgatgggttttgtacgaaaacagtaacactgcgtcacttaacatgcgctgcgtgagttaaattgtgcggcgttacttaaggtgcgcaa 33990655  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaatgtacagagggtgaagagcaggattctaatta 168  Q
    ||||||||||  |||| | ||||| || ||| ||||| | ||||  ||| ||||||||||||| ||||    
T  33990654 gggtaaatttaaaacggctgcaggacgtgagtaaaatttgcaga--gtgtagagcaggattcttatta 33990589  T

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Target: chr4; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 100
Target Start/End: Complemental strand, 1938572 - 1938473
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| || ||| |||||||||||||||||||    
T  1938572 tggagtttggactgatgggttttgtgcgaaaacagtaacattgcgtcacttaacttgcgctgcgtgagttaaggtgtgcagcgttacttaaggtgcgcaa 1938473  T

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Target: chr4; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 41418903 - 41418765
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    |||||||||||||||| ||||||||| | ||||||||||| ||||||||||||||||| |||| ||||||||| |||||  ||||||||||||||| |||    
T  41418903 tggagtttggactgatgggttttgtatgtaaacagtaacattgcgtcacttaacttgcactgcatgagttaagatgcgcggcgttacttaaggtgcacaa 41418804  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    ||||| ||| || | | | ||| ||||||||||||||||    
T  41418803 gggtatattaggcatggctgcatggcgcgagcaaaatgt 41418765  T

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Target: chr4; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 156993 - 157091
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgca 99  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||||  ||||||||||||||||| | |||  |||||||||||||||||    
T  156993 tggagtttggactgatggattttgtacgaaaacagtaacactgcgtgacttaactcacgctgcgtgagttaagtagtgcagagttacttaaggtgcgca 157091  T

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Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 80
Target Start/End: Original strand, 50008946 - 50009023
Alignment:
Q  3 gagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgca 80  Q
    |||||||||||||| ||||||||||||||||||||||||| ||||||||||| || ||||||| | ||||| ||||||    
T  50008946 gagtttggactgatgggttttgtacgaaaacagtaacacttcgtcacttaacctgtgctgcgttacttaaggtgcgca 50009023  T

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Target: chr4; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 473 - 521
Target Start/End: Original strand, 50336846 - 50336894
Alignment:
Q  473 tttgtaggattaaacctctactttgatgttattactttataaatagata 521  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||    
T  50336846 tttgtagtattaaacctctactttgatgttattactttataaatagata 50336894  T

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Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 22923366 - 22923410
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||    
T  22923366 gcgcaagggtaaatttggaacggctgcaaggcgcgagcaaaatgt 22923410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 22928019 - 22928063
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||    
T  22928019 gcgcaagggtaaatttggaacggctgcaaggcgcgagcaaaatgt 22928063  T

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Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 22984298 - 22984342
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||    
T  22984298 gcgcaagggtaaatttggaacggctgcaaggcgcgagcaaaatgt 22984342  T

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Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 22997886 - 22997930
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||||||||||||||||||| | ||| ||||||||||||||||    
T  22997886 gcgcaagggtaaatttggaacggctgcaaggcgcgagcaaaatgt 22997930  T

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Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 76 - 139
Target Start/End: Complemental strand, 18486389 - 18486326
Alignment:
Q  76 gcgcatcgttacttaaggtgcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    ||||| |||||||||||||||||||||||| |||||| | | | ||||||| ||||| ||||||    
T  18486389 gcgcagcgttacttaaggtgcgcaagggtatatttggcatggctgcagggcacgagcgaaatgt 18486326  T

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Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 137
Target Start/End: Original strand, 54185655 - 54185697
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaat 137  Q
    ||||||||||||||||| |||| | ||||||||||||||||||    
T  54185655 gcgcaagggtaaatttgaaacggctgcagggcgcgagcaaaat 54185697  T

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Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 82 - 111
Target Start/End: Original strand, 50009006 - 50009035
Alignment:
Q  82 cgttacttaaggtgcgcaagggtaaatttg 111  Q
    ||||||||||||||||||||||||||||||    
T  50009006 cgttacttaaggtgcgcaagggtaaatttg 50009035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 1939417 - 1939457
Alignment:
Q  99 aagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||| ||||||||||||| | ||||||||||||||||||||    
T  1939417 aaggataaatttggaacggctgcagggcgcgagcaaaatgt 1939457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 56 - 92
Target Start/End: Original strand, 3680044 - 3680080
Alignment:
Q  56 tgcgctgcgtgagttaagttgcgcatcgttacttaag 92  Q
    ||||||||||||||||| ||||||| |||||||||||    
T  3680044 tgcgctgcgtgagttaacttgcgcagcgttacttaag 3680080  T

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Target: chr1 (Bit Score: 111; Significance: 9e-56; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16315274 - 16315433
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||    
T  16315274 tggagtttggactgatgggttttgtacgaaaacagtaacactgcgtcacttaacattcgctgcgtgagttaagttgcgcagcgttacttaaggtgcgcaa 16315373  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaatgtacagagggtgaagagcaggattc 162  Q
    || ||||||||||||| | | |||||||||||||||||| |  |||||| ||||||||||||    
T  16315374 ggataaatttggaacggctgtagggcgcgagcaaaatgtgc--agggtggagagcaggattc 16315433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 30704454 - 30704589
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    ||||||||||||||||  ||||||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||| ||||||||||| || ||||    
T  30704454 tggagtttggactgatgagttttgtacgaaaacagtaacactgtgtcacttaacatgcgctgcgtgagttaaggtgcgcagcgttacttaagatgtgcaa 30704553  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaa 136  Q
     ||||||||| ||||| | |||||||||||||||||    
T  30704554 tggtaaatttagaacggctgcagggcgcgagcaaaa 30704589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 23941627 - 23941489
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| ||||||||  | ||||||||||||||| ||||| |||||||||||||| ||||    
T  23941627 tggagtttggactgatgggttttgtacaaaaacagtaacactgcgtgacttaactcacactgcgtgagttaagtagcgcaacgttacttaaggtgtgcaa 23941528  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    ||||| ||||||   ||| ||||||||||||| ||||||    
T  23941527 gggtatatttggcttgactgcagggcgcgagcgaaatgt 23941489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 81
Target Start/End: Complemental strand, 12063552 - 12063472
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcat 81  Q
    |||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||    
T  12063552 tggagtttggactgatgggttttgtacgaaaacagtaacactgtgtcacttaacttgcgctgcgtgagttaaggtgcgcat 12063472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 6 - 139
Target Start/End: Original strand, 36185892 - 36186025
Alignment:
Q  6 tttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaagggta 105  Q
    ||||||||||| |||||||||||||||||||||   || || ||||||||  |||  ||||||||||||  |||| |||||||||||||||||| |  ||    
T  36185892 tttggactgatgggttttgtacgaaaacagtaattatgtgtgacttaactcacgcaacgtgagttaagtaacgcagcgttacttaaggtgcgcaggtcta 36185991  T
Q  106 aatttggaacgacggcagggcgcgagcaaaatgt 139  Q
     |||||||| | | ||||||||||||| ||||||    
T  36185992 tatttggaatggctgcagggcgcgagcgaaatgt 36186025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 12063484 - 12063430
Alignment:
Q  88 ttaaggtgcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgtaca 142  Q
    ||||||||||||  ||||||||||||||| | ||||| |||||||||||||||||    
T  12063484 ttaaggtgcgcataggtaaatttggaacggctgcaggacgcgagcaaaatgtaca 12063430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 44490725 - 44490767
Alignment:
Q  97 gcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||||||||||||||||| | ||||||||||||||||||||    
T  44490725 gcaagggtaaatttggaacggctgcagggcgcgagcaaaatgt 44490767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 7015033 - 7015077
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||    
T  7015033 gcgcaagggtaaatttcgaacggctgcagggcgcgagcaaaatgt 7015077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 96 - 139
Target Start/End: Original strand, 12068028 - 12068071
Alignment:
Q  96 cgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    ||||||| ||||||||||||| | ||||||||||||||||||||    
T  12068028 cgcaaggataaatttggaacggctgcagggcgcgagcaaaatgt 12068071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 23943653 - 23943718
Alignment:
Q  96 cgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgtacagagggtgaagagcaggattct 163  Q
    |||||||||| ||||||||||   ||||||||| |||||||||| |||  |||||||||||| |||||    
T  23943653 cgcaagggtatatttggaacggttgcagggcgcaagcaaaatgtgcag--ggtgaagagcagaattct 23943718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 8e-47; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 11356331 - 11356192
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgtt-acttaaggtgcgca 99  Q
    |||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||| ||||||||||||||    
T  11356331 tggagtttggactgatgggttttgcacgaaaacagtaacactgcgtcacttaacatgcgctgcgtgagttaagttgtgcagcgttaacttaaggtgcgca 11356232  T
Q  100 agggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    ||||||||||| ||||| | ||||||| ||||||||||||    
T  11356231 agggtaaatttagaacggctgcagggcacgagcaaaatgt 11356192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 23941335 - 23941224
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| |||||||||| | |||||||||||||| ||||| |||||||||||||| ||||    
T  23941335 tggagtttggactgatgagttttgtacgaaaacagtaacactgcgtgacttaacttgtggtgcgtgagttaagtagcgcaacgttacttaaggtgtgcaa 23941236  T
Q  101 gggtaaatttgg 112  Q
    ||||| ||||||    
T  23941235 gggtatatttgg 23941224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 44222001 - 44221906
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgc 96  Q
    ||||||||||| ||||  ||||| |||||||||||||||||||||||||||||  |||| || ||||||||||||||||| |||||||||||||||    
T  44222001 tggagtttggattgatgagttttatacgaaaacagtaacactgcgtcacttaatatgcgttgtgtgagttaagttgcgcagcgttacttaaggtgc 44221906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4278594 - 4278521
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagt 74  Q
    |||||| | ||||||| ||||||||||||||||||||||  ||||| ||||||||  |||||||||||||||||    
T  4278594 tggagtatcgactgatgggttttgtacgaaaacagtaactttgcgtgacttaactcacgctgcgtgagttaagt 4278521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 50 - 139
Target Start/End: Complemental strand, 44221933 - 44221844
Alignment:
Q  50 ttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||| |||||| |||| | ||||| ||| || |||||||||||||||||||||||||||||  |||| | |||| |||||||||||||||    
T  44221933 ttaagttgcgcagcgttacttaaggtgcacaacgttacttaaggtgcgcaagggtaaatttaaaacggctgcagagcgcgagcaaaatgt 44221844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 95; Significance: 3e-46; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 5 - 139
Target Start/End: Original strand, 20887818 - 20887952
Alignment:
Q  5 gtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaagggt 104  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||| |||| ||||||||||||||||| || |||||||||||||||||||||||    
T  20887818 gtttggactgatgggttttgtacgaaaacagtaacactgtgtcacttaacatgcgttgcgtgagttaagttgcacaacgttacttaaggtgcgcaagggt 20887917  T
Q  105 aaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||| ||||| | |||| |||||||||||||||    
T  20887918 aaatttcgaacggctgcagagcgcgagcaaaatgt 20887952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 29195974 - 29196132
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||| || | ||||||||||||||| |||| | ||| ||||||||| |||    
T  29195974 tggagtttggactaatgggttttgtacgaaaacagtaacactgcgtcacttaacatgggatgcgtgagttaagttacgcagctttatttaaggtgcacaa 29196073  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaatgtacagagggtgaagagcaggatt 161  Q
    |||||||||||||||  | ||| |||||||||||||||| |  |||||| |||||||||||    
T  29196074 gggtaaatttggaactgctgcatggcgcgagcaaaatgtgc--agggtggagagcaggatt 29196132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 35050398 - 35050555
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    |||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||     
T  35050398 tggagtctggactgatgagttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaaggtgcgcaacgttacttaaggtgcgca- 35050496  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaatgtacagagggtgaagagcaggattc 162  Q
      |||||||| ||| |   ||||||||||| |||||||| |  |||||| ||||||||||||    
T  35050497 -tgtaaatttagaatggttgcagggcgcgaacaaaatgtgc--agggtggagagcaggattc 35050555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 105
Target Start/End: Complemental strand, 32910570 - 32910473
Alignment:
Q  8 tggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaagggta 105  Q
    ||||||||| |||||||||||||||||||||| |||||| |||||| |  |||| ||||||||||||| |||| |||||||||||  ||||| |||||    
T  32910570 tggactgatgggttttgtacgaaaacagtaactctgcgtgacttaattcacgctacgtgagttaagttacgcagcgttacttaagtagcgcatgggta 32910473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 137
Target Start/End: Complemental strand, 29195263 - 29195221
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaat 137  Q
    |||||||||||||||||||||| | |||||| |||||||||||    
T  29195263 gcgcaagggtaaatttggaacggccgcagggagcgagcaaaat 29195221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 12143874 - 12143830
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||| ||||||||| ||||| | ||||||||||||||||||||    
T  12143874 gcgcaaaggtaaatttagaacggctgcagggcgcgagcaaaatgt 12143830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 93; Significance: 5e-45; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 20 - 163
Target Start/End: Complemental strand, 41601093 - 41600952
Alignment:
Q  20 ttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaagggtaaatttggaacgacg 119  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |     
T  41601093 ttttgtacgaaaacagtaacactgcgtcacttaacatgcgctgtgtgagttaagttgcgcatcgttacttaaggtgcacaaggataaatttggaacggct 41600994  T
Q  120 gcagggcgcgagcaaaatgtacagagggtgaagagcaggattct 163  Q
    ||||| |||||| ||||||| |  |||||| |||||||||||||    
T  41600993 gcaggacgcgagtaaaatgtgc--agggtggagagcaggattct 41600952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 22661891 - 22661800
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaag 92  Q
    |||||| ||||||||| |||||||||||||||||||||| |||||| ||||||||  ||||||||||||||||| ||||| |||||||||||    
T  22661891 tggagtatggactgatgggttttgtacgaaaacagtaactctgcgtgacttaactcacgctgcgtgagttaagtagcgcaacgttacttaag 22661800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Complemental strand, 4412662 - 4412618
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||| ||||||||||||||| | ||||||||||||||||||||    
T  4412662 gcgcaaaggtaaatttggaacggctgcagggcgcgagcaaaatgt 4412618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 69 - 139
Target Start/End: Complemental strand, 37227078 - 37227008
Alignment:
Q  69 ttaagttgcgcatcgttacttaaggtgcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||||||||| ||||| ||||   || ||| ||||||||||||| | | ||||||||||||||||||||    
T  37227078 ttaagttgcgcaacgttagttaactagcacaaaggtaaatttggaatggctgcagggcgcgagcaaaatgt 37227008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 6e-32; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 9829491 - 9829629
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    |||||||||||||||| |||||||||||||||||||||| |||| | ||||||||   |||||||||||||||  ||||| |||||||||||||||| |     
T  9829491 tggagtttggactgatgggttttgtacgaaaacagtaactctgcatgacttaactcatgctgcgtgagttaaggcgcgcaacgttacttaaggtgcgtag 9829590  T
Q  101 gggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    ||||| |||||| | | | ||||||||||||||||||||    
T  9829591 gggtatatttggcatggctgcagggcgcgagcaaaatgt 9829629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 19380267 - 19380311
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    ||||||| |||||||||||||| | ||||||||||||||||||||    
T  19380267 gcgcaagagtaaatttggaacggctgcagggcgcgagcaaaatgt 19380311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 42242085 - 42242151
Alignment:
Q  94 tgcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgtacagagggtgaagagcaggattc 162  Q
    ||||||||||||  ||||| ||| | |||||||||||||||||||| |  |||||||||||||| ||||    
T  42242085 tgcgcaagggtatttttggcacggctgcagggcgcgagcaaaatgtgc--agggtgaagagcagtattc 42242151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 95 - 139
Target Start/End: Original strand, 5848138 - 5848182
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||||||||||||||||| | | || |||||||||||||||||    
T  5848138 gcgcaagggtaaatttggaatggctgctgggcgcgagcaaaatgt 5848182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 68; Significance: 4e-30; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 14443867 - 14443982
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    ||||||||||| |||| |||||||||||||| || ||| | || |||||||||||||||||||||| |||||| ||| || |||||||||||||| ||||    
T  14443867 tggagtttggaatgatgggttttgtacgaaaccaataaaattgtgtcacttaacttgcgctgcgtgggttaaggtgcacaacgttacttaaggtgagcaa 14443966  T
Q  101 gggtaaatttggaacg 116  Q
    ||||||||||||||||    
T  14443967 gggtaaatttggaacg 14443982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30933942 - 30934036
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtg 95  Q
    ||||||||||||| ||  |||||||||||||||||||||  ||||||||||||| |||||| ||||||||||||||| || ||||||||||||||    
T  30933942 tggagtttggactaatgagttttgtacgaaaacagtaacgttgcgtcacttaacatgcgctacgtgagttaagttgcacaacgttacttaaggtg 30934036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 20518196 - 20518309
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaaggtgcgcaa 100  Q
    |||||| |||||| || ||||||||||||||||| |||| |||||| ||||||||  ||||||||||||||||| ||| |||||||||||||  |||||     
T  20518196 tggagtatggacttatgggttttgtacgaaaacattaactctgcgtgacttaactcacgctgcgtgagttaagtagcgaatcgttacttaagtagcgcag 20518295  T
Q  101 gggtaaatttggaa 114  Q
    ||||| ||||||||    
T  20518296 gggtatatttggaa 20518309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 53767216 - 53767164
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaa 53  Q
    |||||||||||||||| |||||||||||| || ||||||||||| | ||||||    
T  53767216 tggagtttggactgatgggttttgtacgacaatagtaacactgcattacttaa 53767164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 84 - 125
Target Start/End: Complemental strand, 53767171 - 53767130
Alignment:
Q  84 ttacttaaggtgcgcaagggtaaatttggaacgacggcaggg 125  Q
    |||||||||||||| |||||||||||||||||| | ||||||    
T  53767171 ttacttaaggtgcgtaagggtaaatttggaacggctgcaggg 53767130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 34437039 - 34436999
Alignment:
Q  99 aagggtaaatttggaacgacggcagggcgcgagcaaaatgt 139  Q
    |||||||||||||||||| | ||||| ||||||||||||||    
T  34437039 aagggtaaatttggaacggctgcaggacgcgagcaaaatgt 34436999  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 60
Target Start/End: Complemental strand, 54335639 - 54335587
Alignment:
Q  8 tggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgc 60  Q
    |||||||||  ||||||||| ||||||||||| |||||| |||||||| ||||    
T  54335639 tggactgatgagttttgtacaaaaacagtaactctgcgttacttaactagcgc 54335587  T

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Target: scaffold1050 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 2053 - 1962
Alignment:
Q  1 tggagtttggactgataggttttgtacgaaaacagtaacactgcgtcacttaacttgcgctgcgtgagttaagttgcgcatcgttacttaag 92  Q
    |||||| ||||||||| ||||||| |||||||||||||| |||||| |||||| |  ||| |||||| ||||||||| || | |||||||||    
T  2053 tggagtatggactgatgggttttgcacgaaaacagtaactctgcgtgacttaaatcacgccgcgtgaattaagttgcacaacattacttaag 1962  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 95 - 141
Target Start/End: Original strand, 7527113 - 7527159
Alignment:
Q  95 gcgcaagggtaaatttggaacgacggcagggcgcgagcaaaatgtac 141  Q
    |||||||||||||||| ||||| | ||||||||||||||||||||||    
T  7527113 gcgcaagggtaaatttagaacggctgcagggcgcgagcaaaatgtac 7527159  T

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