View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6731_low_11 (Length: 223)

Name: NF6731_low_11
Description: NF6731
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6731_low_11
NF6731_low_11
[»] chr1 (38 HSPs)
chr1 (108-204)||(33743435-33743531)
chr1 (24-107)||(1403040-1403123)
chr1 (24-105)||(27817007-27817088)
chr1 (24-107)||(6288207-6288290)
chr1 (24-107)||(8560156-8560239)
chr1 (24-107)||(49534399-49534482)
chr1 (24-107)||(42838937-42839020)
chr1 (24-99)||(43368838-43368913)
chr1 (24-99)||(52859791-52859866)
chr1 (24-93)||(42839551-42839620)
chr1 (24-99)||(1403691-1403765)
chr1 (24-99)||(7219651-7219725)
chr1 (24-107)||(7782694-7782777)
chr1 (24-99)||(8560746-8560820)
chr1 (24-99)||(27797125-27797200)
chr1 (24-107)||(27797739-27797822)
chr1 (24-99)||(42839709-42839784)
chr1 (24-99)||(49533751-49533826)
chr1 (24-94)||(43368203-43368273)
chr1 (24-96)||(42840316-42840388)
chr1 (24-99)||(48843588-48843663)
chr1 (24-94)||(51248486-51248556)
chr1 (24-69)||(48843965-48844010)
chr1 (24-99)||(41563187-41563262)
chr1 (24-102)||(48369487-48369565)
chr1 (58-107)||(29148940-29148989)
chr1 (24-63)||(37725423-37725462)
chr1 (24-98)||(27934298-27934371)
chr1 (24-62)||(41563795-41563833)
chr1 (24-65)||(37725673-37725714)
chr1 (24-64)||(7219051-7219091)
chr1 (58-110)||(50269247-50269299)
chr1 (24-55)||(6287672-6287703)
chr1 (24-59)||(51247876-51247911)
chr1 (56-105)||(48370074-48370123)
chr1 (66-107)||(48619474-48619515)
chr1 (58-99)||(48620360-48620401)
chr1 (24-64)||(52859192-52859232)
[»] chr3 (54 HSPs)
chr3 (24-109)||(3944893-3944978)
chr3 (24-107)||(23584886-23584969)
chr3 (24-107)||(23599709-23599792)
chr3 (24-107)||(25025174-25025257)
chr3 (24-99)||(29342349-29342424)
chr3 (24-107)||(32672166-32672249)
chr3 (24-107)||(37373965-37374048)
chr3 (24-110)||(42356230-42356319)
chr3 (24-107)||(50687711-50687794)
chr3 (24-108)||(44868006-44868090)
chr3 (24-99)||(25025767-25025842)
chr3 (24-107)||(31014927-31015010)
chr3 (24-99)||(44868621-44868696)
chr3 (24-99)||(55281843-55281918)
chr3 (24-107)||(55282424-55282506)
chr3 (21-107)||(50675125-50675211)
chr3 (27-96)||(37375474-37375543)
chr3 (24-108)||(19555269-19555353)
chr3 (24-108)||(37374819-37374898)
chr3 (24-99)||(8427746-8427821)
chr3 (24-99)||(23584245-23584320)
chr3 (24-99)||(23599068-23599143)
chr3 (24-99)||(31014345-31014420)
chr3 (32-99)||(41459138-41459204)
chr3 (24-107)||(48219238-48219321)
chr3 (24-99)||(24220587-24220662)
chr3 (24-99)||(37374609-37374684)
chr3 (24-87)||(47737676-47737739)
chr3 (24-99)||(48218599-48218674)
chr3 (24-99)||(19555926-19556004)
chr3 (24-99)||(41875619-41875694)
chr3 (24-79)||(49752913-49752968)
chr3 (24-94)||(47737077-47737146)
chr3 (24-69)||(43658898-43658943)
chr3 (24-63)||(29342996-29343035)
chr3 (24-99)||(50674637-50674707)
chr3 (29-99)||(43658263-43658332)
chr3 (69-107)||(49752973-49753011)
chr3 (27-85)||(50687124-50687182)
chr3 (24-69)||(38575059-38575104)
chr3 (58-107)||(41040571-41040620)
chr3 (24-105)||(43103901-43103982)
chr3 (66-107)||(53269393-53269434)
chr3 (24-64)||(49752316-49752356)
chr3 (24-63)||(38575645-38575684)
chr3 (66-108)||(38280303-38280345)
chr3 (58-99)||(38279417-38279458)
chr3 (24-61)||(40887944-40887981)
chr3 (75-107)||(49164706-49164738)
chr3 (28-107)||(24221179-24221267)
chr3 (24-62)||(32672786-32672824)
chr3 (67-107)||(8424007-8424047)
chr3 (67-107)||(31168569-31168609)
chr3 (56-100)||(43104529-43104573)
[»] chr5 (26 HSPs)
chr5 (24-108)||(3957499-3957583)
chr5 (24-108)||(4929509-4929593)
chr5 (24-108)||(33430042-33430125)
chr5 (24-107)||(5324406-5324489)
chr5 (24-107)||(8813686-8813769)
chr5 (24-99)||(26687508-26687583)
chr5 (24-99)||(26957239-26957314)
chr5 (24-99)||(3739666-3739741)
chr5 (24-99)||(4928879-4928954)
chr5 (24-107)||(28075972-28076055)
chr5 (24-99)||(3958137-3958212)
chr5 (24-99)||(21770002-21770081)
chr5 (24-88)||(42408011-42408075)
chr5 (58-109)||(39149468-39149519)
chr5 (24-107)||(26688060-26688135)
chr5 (24-107)||(26957791-26957866)
chr5 (43-99)||(5324312-5324368)
chr5 (24-107)||(13738061-13738143)
chr5 (24-63)||(42408568-42408607)
chr5 (49-99)||(8813085-8813135)
chr5 (58-98)||(25075034-25075074)
chr5 (58-98)||(25133003-25133043)
chr5 (28-107)||(25074283-25074362)
chr5 (28-107)||(25132252-25132331)
chr5 (58-113)||(38064136-38064191)
chr5 (24-69)||(3739038-3739083)
[»] chr4 (57 HSPs)
chr4 (24-108)||(199229-199313)
chr4 (24-107)||(40847677-40847760)
chr4 (24-109)||(2713846-2713931)
chr4 (24-109)||(12639963-12640048)
chr4 (24-107)||(388753-388836)
chr4 (24-107)||(25370395-25370478)
chr4 (24-107)||(55815825-55815908)
chr4 (24-108)||(31876787-31876871)
chr4 (24-99)||(20075533-20075608)
chr4 (24-99)||(26423767-26423842)
chr4 (24-107)||(48091098-48091181)
chr4 (24-99)||(55816453-55816528)
chr4 (24-108)||(33569719-33569803)
chr4 (24-107)||(20422734-20422817)
chr4 (24-107)||(32291015-32291098)
chr4 (24-99)||(36945226-36945301)
chr4 (24-107)||(52597714-52597797)
chr4 (24-106)||(26424407-26424489)
chr4 (24-99)||(199007-199082)
chr4 (24-99)||(389408-389483)
chr4 (24-99)||(12640589-12640664)
chr4 (24-99)||(25369791-25369866)
chr4 (24-99)||(28223571-28223646)
chr4 (24-99)||(36111220-36111294)
chr4 (24-107)||(37567477-37567560)
chr4 (24-99)||(48090474-48090549)
chr4 (24-99)||(48782077-48782152)
chr4 (24-99)||(52597498-52597573)
chr4 (24-111)||(29809090-29809177)
chr4 (24-107)||(36944610-36944693)
chr4 (24-99)||(40345133-40345208)
chr4 (24-106)||(32901852-32901934)
chr4 (24-99)||(32902468-32902543)
chr4 (24-99)||(35427254-35427328)
chr4 (24-114)||(6862640-6862730)
chr4 (33-99)||(20422139-20422205)
chr4 (24-101)||(40344509-40344586)
chr4 (24-99)||(40848133-40848208)
chr4 (21-107)||(31842723-31842808)
chr4 (30-107)||(47321759-47321836)
chr4 (24-68)||(20076189-20076233)
chr4 (26-99)||(3708787-3708854)
chr4 (66-107)||(18501739-18501780)
chr4 (24-89)||(31877435-31877500)
chr4 (59-107)||(35428238-35428286)
chr4 (56-110)||(33570311-33570365)
chr4 (24-91)||(47328399-47328466)
chr4 (58-109)||(52870153-52870204)
chr4 (58-100)||(45772170-45772212)
chr4 (58-100)||(45778725-45778766)
chr4 (66-107)||(33758132-33758173)
chr4 (24-69)||(37566941-37566986)
chr4 (58-99)||(52869455-52869496)
chr4 (67-107)||(39844896-39844936)
chr4 (24-63)||(48781526-48781565)
chr4 (58-107)||(198153-198202)
chr4 (58-99)||(3221424-3221465)
[»] chr2 (44 HSPs)
chr2 (24-108)||(9224265-9224349)
chr2 (24-107)||(4386963-4387046)
chr2 (24-108)||(20244174-20244258)
chr2 (24-107)||(7716671-7716754)
chr2 (24-107)||(28223788-28223871)
chr2 (24-99)||(6849296-6849371)
chr2 (24-107)||(6849545-6849628)
chr2 (24-107)||(16571118-16571201)
chr2 (24-99)||(28224391-28224466)
chr2 (24-108)||(7583796-7583880)
chr2 (24-99)||(10883295-10883370)
chr2 (24-99)||(16887591-16887666)
chr2 (24-102)||(16903092-16903170)
chr2 (24-104)||(8113303-8113383)
chr2 (24-99)||(3595254-3595329)
chr2 (24-99)||(7583140-7583215)
chr2 (24-107)||(8963504-8963587)
chr2 (24-107)||(11256743-11256826)
chr2 (24-107)||(30161933-30162016)
chr2 (24-99)||(39477328-39477403)
chr2 (24-99)||(11256124-11256199)
chr2 (24-99)||(16571729-16571804)
chr2 (24-98)||(40166846-40166920)
chr2 (24-112)||(33847868-33847956)
chr2 (24-99)||(7717288-7717362)
chr2 (24-107)||(3595898-3595981)
chr2 (24-107)||(40165873-40165956)
chr2 (33-99)||(8112688-8112754)
chr2 (24-81)||(20243579-20243636)
chr2 (40-99)||(4386363-4386422)
chr2 (56-107)||(12206788-12206839)
chr2 (24-88)||(39476534-39476598)
chr2 (24-78)||(467134-467188)
chr2 (24-92)||(467344-467412)
chr2 (60-108)||(18950534-18950582)
chr2 (58-108)||(9958740-9958790)
chr2 (61-107)||(43743842-43743888)
chr2 (58-107)||(32471939-32471988)
chr2 (24-96)||(17918032-17918104)
chr2 (59-107)||(18949909-18949957)
chr2 (56-102)||(33848496-33848542)
chr2 (58-108)||(44829315-44829365)
chr2 (27-107)||(12207391-12207472)
chr2 (24-56)||(17918688-17918720)
[»] chr8 (42 HSPs)
chr8 (24-107)||(7818474-7818557)
chr8 (24-107)||(33114191-33114274)
chr8 (24-109)||(16889193-16889278)
chr8 (24-109)||(35237257-35237342)
chr8 (24-107)||(11999083-11999166)
chr8 (24-107)||(39852154-39852237)
chr8 (24-109)||(16879886-16879971)
chr8 (24-99)||(11998464-11998539)
chr8 (21-110)||(44062596-44062685)
chr8 (24-99)||(16880521-16880596)
chr8 (24-107)||(43480616-43480699)
chr8 (24-99)||(43481284-43481359)
chr8 (24-99)||(43591015-43591090)
chr8 (24-108)||(4374995-4375079)
chr8 (24-99)||(7819100-7819175)
chr8 (24-99)||(30115999-30116074)
chr8 (24-99)||(36848200-36848275)
chr8 (24-107)||(40309503-40309586)
chr8 (24-99)||(40907607-40907681)
chr8 (24-107)||(43591619-43591702)
chr8 (24-99)||(44061993-44062068)
chr8 (24-107)||(30115361-30115450)
chr8 (24-97)||(33113585-33113658)
chr8 (24-89)||(38778172-38778237)
chr8 (24-112)||(10806440-10806528)
chr8 (24-99)||(16889831-16889905)
chr8 (24-99)||(38778798-38778873)
chr8 (24-99)||(35237867-35237941)
chr8 (24-99)||(39852806-39852881)
chr8 (24-81)||(2209032-2209089)
chr8 (24-99)||(4373694-4373769)
chr8 (65-107)||(37532576-37532618)
chr8 (24-69)||(4374304-4374349)
chr8 (66-107)||(41761799-41761840)
chr8 (24-64)||(10805991-10806031)
chr8 (70-107)||(32667532-32667569)
chr8 (66-107)||(41762523-41762564)
chr8 (67-99)||(37533323-37533355)
chr8 (56-105)||(4374447-4374496)
chr8 (58-107)||(43433811-43433860)
chr8 (66-107)||(43434709-43434750)
chr8 (28-96)||(38572233-38572301)
[»] scaffold0229 (1 HSPs)
scaffold0229 (24-107)||(15236-15319)
[»] chr7 (37 HSPs)
chr7 (24-107)||(36682835-36682918)
chr7 (24-107)||(27855566-27855648)
chr7 (24-99)||(36683467-36683542)
chr7 (24-108)||(42455920-42456004)
chr7 (24-99)||(34853399-34853474)
chr7 (24-99)||(42456519-42456594)
chr7 (24-107)||(47813971-47814054)
chr7 (24-99)||(47814638-47814713)
chr7 (24-101)||(22276079-22276156)
chr7 (24-104)||(4895085-4895165)
chr7 (24-104)||(19816895-19816975)
chr7 (24-99)||(19816272-19816347)
chr7 (24-99)||(24044046-24044121)
chr7 (24-107)||(34853999-34854082)
chr7 (24-107)||(46732567-46732650)
chr7 (24-96)||(46814416-46814488)
chr7 (24-91)||(4894515-4894582)
chr7 (24-108)||(46815065-46815148)
chr7 (24-99)||(22275433-22275507)
chr7 (21-107)||(36620118-36620204)
chr7 (24-99)||(24323985-24324059)
chr7 (24-99)||(30711796-30711871)
chr7 (24-102)||(33805974-33806052)
chr7 (24-85)||(32499875-32499936)
chr7 (24-69)||(32499287-32499332)
chr7 (24-64)||(18520900-18520940)
chr7 (21-61)||(36620740-36620780)
chr7 (66-107)||(85094-85135)
chr7 (60-108)||(30422782-30422829)
chr7 (56-104)||(33806602-33806650)
chr7 (24-59)||(46012943-46012978)
chr7 (53-99)||(27856162-27856208)
chr7 (67-107)||(48881068-48881108)
chr7 (58-99)||(84385-84426)
chr7 (66-107)||(23283887-23283928)
chr7 (66-107)||(43754884-43754925)
chr7 (67-107)||(19767878-19767918)
[»] chr6 (16 HSPs)
chr6 (24-107)||(33668221-33668304)
chr6 (24-107)||(5523849-5523932)
chr6 (24-99)||(6032166-6032241)
chr6 (24-107)||(30611348-30611431)
chr6 (24-106)||(12809705-12809787)
chr6 (24-108)||(13936643-13936727)
chr6 (24-99)||(5523208-5523283)
chr6 (24-113)||(6032756-6032845)
chr6 (24-99)||(12809077-12809152)
chr6 (24-107)||(31723833-31723916)
chr6 (24-95)||(30610723-30610794)
chr6 (24-99)||(13944298-13944373)
chr6 (24-99)||(33668833-33668908)
chr6 (24-103)||(33648166-33648245)
chr6 (65-107)||(32079019-32079061)
chr6 (66-113)||(32079798-32079845)
[»] scaffold0007 (1 HSPs)
scaffold0007 (24-107)||(11266-11348)
[»] scaffold0368 (1 HSPs)
scaffold0368 (24-107)||(11787-11870)
[»] scaffold1095 (1 HSPs)
scaffold1095 (24-99)||(1493-1568)
[»] scaffold0039 (1 HSPs)
scaffold0039 (58-108)||(90614-90664)


Alignment Details
Target: chr1 (Bit Score: 93; Significance: 2e-45; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 33743531 - 33743435
Alignment:
Q  108 aaatattttggagtgagattattcccaattgtccaatttgtaggaatgaatgccaaacaactatcaatgttttgagggattttgcagtcgtgcaacc 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  33743531 aaatattttggagtgagattattcccaattgtccaatttgtaggaatgaataccaaacaactatcaatgttttgagggattttgcagtcgtgcaacc 33743435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 1403123 - 1403040
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  1403123 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtgaaatgccacc 1403040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 105
Target Start/End: Original strand, 27817007 - 27817088
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgcca 105  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||| ||||||||||||||||    
T  27817007 aatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaaccttacccatgtgaaatgcca 27817088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 6288207 - 6288290
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||||||||||||   ||||||| ||||||||||||||||||||||||||||||||||    
T  6288207 aatatgttcttcacttaatctaatcattgaatccaacttctccatggtgagaaaggattaacctttcccatgtgaaatgccacc 6288290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 8560239 - 8560156
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||| ||||||||||| ||| |||||||| |||||||||||||||||||||||||||||||||    
T  8560239 aatatgttcttcacttaatctaatctttgaatccaacattcccatggtggaaaaggattaacctttcccatgtgaaatgccacc 8560156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 49534399 - 49534482
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||| || ||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  49534399 aatatgtttttaacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgccacc 49534482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 42839020 - 42838937
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  42839020 aatatgttcttcacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaaatggcacc 42838937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 43368838 - 43368913
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||||||||||||||||    
T  43368838 aatatgttcttcacttaatctaatcattgaatacaactttcccatggtgggaaagaattaacctttcccatgtgaa 43368913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 52859791 - 52859866
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||    
T  52859791 aatatgttcttcacttaatctaatcattgaattcaactttcccatggttggaaaggattaacctttcccatgtgaa 52859866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 93
Target Start/End: Original strand, 42839551 - 42839620
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttccca 93  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  42839551 aatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttccca 42839620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 1403691 - 1403765
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||    
T  1403691 aatatgttcttcacttaatctaatcattgaatc-aactttcccatggtgggaaaggattaacctttcctatgtgaa 1403765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 7219651 - 7219725
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||    
T  7219651 aatatgttcttcacttaatctaatcattgaatccaa-tttcccatgatgggaaaggattaacctttcccatgtgaa 7219725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 7782694 - 7782777
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||| ||| |||||||||||||||||||| |||||| ||||||||||  |||||||||||||||||||||||    
T  7782694 aatatgttcttcacttgatccaatcattgaatccaactttcccatggtaggaaaggattggcctttcccatgtgaaatgccacc 7782777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 8560746 - 8560820
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||    
T  8560746 aatatgttcttcacttaatctaatcattgaatc-aacttttccatggtgggaaaggattaacctttcccatgtgaa 8560820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 27797200 - 27797125
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||| |||||||||    
T  27797200 aatatgttcttcacttaatctaatcattgaattcaaccttcccatggtgggaaaggattaaccttttccatgtgaa 27797125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 27797739 - 27797822
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||| || ||||||| ||| |||| |||||||||||||||||||||||||||| ||||    
T  27797739 aatatgttcttcacttaatctaatcattgactctaactttcccatagtggaaaaggattaacctttcccatgtgaaatggcacc 27797822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 42839784 - 42839709
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||||||||||||||    
T  42839784 aatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtgaa 42839709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 49533826 - 49533751
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||| || |||||||    
T  49533826 aatatgttcttcacttaatctaatcattgaatccaactttcccgtggtgggaaaggattaaccttccctatgtgaa 49533751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 43368273 - 43368203
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccat 94  Q
    ||||||||||||||||||| ||||||||||||| ||| ||| |||||||||||||||||||||||||||||    
T  43368273 aatatgttcttcacttaatttaatcattgaatctaacattcccatggtgggaaaggattaacctttcccat 43368203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 24 - 96
Target Start/End: Original strand, 42840316 - 42840388
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgt 96  Q
    |||||||||||||||||||||||||||||||| |||||||| ||| |||| ||| ||||||||||||||||||    
T  42840316 aatatgttcttcacttaatctaatcattgaattcaactttcccatagtggaaaatgattaacctttcccatgt 42840388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 48843663 - 48843588
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||| |||||||||| |||||||||||||||||||||  |||||| |||| |||||||||||||||||||||    
T  48843663 aatatgttattcacttaatataatcattgaatccaactttcctatggtgtgaaaagattaacctttcccatgtgaa 48843588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 51248486 - 51248556
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccat 94  Q
    |||||||||||||||||||||||| |||||||| ||||||  ||||||||||||  |||||||||||||||    
T  51248486 aatatgttcttcacttaatctaattattgaatcaaacttttccatggtgggaaaaaattaacctttcccat 51248556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 48843965 - 48844010
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatg 69  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  48843965 aatatgttcttcacttaatctaatcattgaatccaactttcccatg 48844010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 41563262 - 41563187
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||| |||||||| |||||||||| |||||||||||||||| |||||| | |||| |||||| |||||||| ||||    
T  41563262 aatacgttcttcatttaatctaataattgaatccaactttcccatggtagaaaagaattaacatttcccatatgaa 41563187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 48369565 - 48369487
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatg 102  Q
    |||||||||||||||||||| ||||||||||||||||||||  || |||| ||| ||||    ||||||||||||||||    
T  48369565 aatatgttcttcacttaatccaatcattgaatccaactttcctatagtggaaaatgattggtttttcccatgtgaaatg 48369487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 29148989 - 29148940
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||| ||||||||||||||||||||||||||| ||| ||||||||||    
T  29148989 aactttcccatggtgggaaaggattaacctttcccgtgttaaatgccacc 29148940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 37725462 - 37725423
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaacttt 63  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  37725462 aatatgttcttcacttaatctaatgattgaatccaacttt 37725423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 27934298 - 27934371
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtga 98  Q
    |||||||||||| |||||||||||||||| ||||||||||| |||| ||| |||| |||||| |||  |||||||    
T  27934298 aatatgttcttctcttaatctaatcattg-atccaactttcccatgttggaaaagaattaacatttttcatgtga 27934371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 41563795 - 41563833
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactt 62  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  41563795 aatatgttcttcacttaatctaataattgaatccaactt 41563833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 37725673 - 37725714
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttct 65  Q
    ||||| |||||||||||||||||||||||||||||| |||||    
T  37725673 aatatattcttcacttaatctaatcattgaatccaattttct 37725714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 7219091 - 7219051
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttc 64  Q
    ||||| ||||||| |||||||||||||||||||||||||||    
T  7219091 aatatattcttcatttaatctaatcattgaatccaactttc 7219051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 50269247 - 50269299
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaaa 110  Q
    ||||||| ||||||||||||||||| || |||||||||  |||||||||||||    
T  50269247 aactttcccatggtgggaaaggattcacatttcccatggtaaatgccaccaaa 50269299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 55
Target Start/End: Complemental strand, 6287703 - 6287672
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaat 55  Q
    ||||||||||||||||||||||||||||||||    
T  6287703 aatatgttcttcacttaatctaatcattgaat 6287672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 59
Target Start/End: Complemental strand, 51247911 - 51247876
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaa 59  Q
    ||||| ||||||||||||||||||||||||||||||    
T  51247911 aatatattcttcacttaatctaatcattgaatccaa 51247876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 105
Target Start/End: Original strand, 48370074 - 48370123
Alignment:
Q  56 ccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgcca 105  Q
    |||||||| ||||| | ||||| |||| ||||||||||||||||||||||    
T  48370074 ccaactttttcatgataggaaaagattgacctttcccatgtgaaatgcca 48370123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 48619515 - 48619474
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||| |||  |||||||||||||||||||||||    
T  48619515 catggtgggaaagaattggcctttcccatgtgaaatgccacc 48619474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 48620360 - 48620401
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||| | |||||||||||||||| ||||||||||||||||    
T  48620360 aacttttttatggtgggaaaggattcacctttcccatgtgaa 48620401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 52859232 - 52859192
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttc 64  Q
    |||||||| |||| ||||||||||||||||||| |||||||    
T  52859232 aatatgttattcatttaatctaatcattgaatctaactttc 52859192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 7e-39; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 3944978 - 3944893
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3944978 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccaccaa 3944893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 23584886 - 23584969
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  23584886 aatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaaatgccacc 23584969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 23599709 - 23599792
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||    
T  23599709 aatatgttcttcacttaatctaatcattgaatccaactttaccatggtgggaaaggattaacctttcccatgtgaaatgccacc 23599792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 25025257 - 25025174
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||    
T  25025257 aatatgttcttcacttaatctaatcattgaatcaaactttcccatgatgggaaaggattaacctttcccatgtgaaatgccacc 25025174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 29342424 - 29342349
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  29342424 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtgaa 29342349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 32672249 - 32672166
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||| ||||||||||    
T  32672249 aatatgttcttcacttaatctaatcattaaatccaactttcccatgttgggaaaggattaacctttcccatgtaaaatgccacc 32672166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 37374048 - 37373965
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||| ||||||||||    
T  37374048 aatatgttcttcacttaatttaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtaaaatgccacc 37373965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 110
Target Start/End: Complemental strand, 42356319 - 42356230
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctca---tggtgggaaaggattaacctttcccatgtgaaatgccaccaaa 110  Q
    ||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||| |||||||||||||||||||||||||||    
T  42356319 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtggtgggaaaggattgacctttcccatgtgaaatgccaccaaa 42356230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 50687711 - 50687794
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||| ||||||||||||||||||||||| ||||    
T  50687711 aatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaagaattaacctttcccatgtgaaatgtcacc 50687794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 44868090 - 44868006
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||||||||||||    
T  44868090 aatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaatgattaacctttcctatgtgaaatgccacca 44868006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 25025767 - 25025842
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  25025767 aatatgttcttctcttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatgtgaa 25025842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 31014927 - 31015010
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||  ||| ||||||| |||||||||||||||| ||||||||||||    
T  31014927 aatatgttcttcacttaatctaatcattgaatccaactttcctatgatgggaaaagattaacctttcccatatgaaatgccacc 31015010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 44868621 - 44868696
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||||||||||||||||||||    
T  44868621 aatatgttcttcacttaatctaatcattgaatcaaattttcccatggtgggaaaggattaacctttcccatgtgaa 44868696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 55281918 - 55281843
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  55281918 aatatgttcttcacttaatctaatcattaaatccaattttcccatggtgggaaaggattaacctttcccatgtgaa 55281843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 55282424 - 55282506
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||| | ||||||||||||||||||||    
T  55282424 aatatgttcttcacttaatctaatcattaaatccaactttcccatggtgggaaaggattaaac-ttcccatgtgaaatgccacc 55282506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 50675125 - 50675211
Alignment:
Q  21 aataatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||| |||||||| ||| |||  |||||||||||||||||||||||||||| ||||    
T  50675125 aataatatgttcttcacttaatctaatcattgaattcaactttcccattgtgaaaaaggattaacctttcccatgtgaaatgtcacc 50675211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 27 - 96
Target Start/End: Original strand, 37375474 - 37375543
Alignment:
Q  27 atgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgt 96  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||    
T  37375474 atgttcttcacttaatctaatcatcgaatccaactttcttatggtgggaaaggattaacctttcccatgt 37375543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 19555353 - 19555269
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    |||||||||||||||||||||||||||| |||||||||||| |||| ||||||| |||||||||||  |||||||||||||||||    
T  19555353 aatatgttcttcacttaatctaatcatttaatccaactttcccatgatgggaaaagattaacctttttcatgtgaaatgccacca 19555269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 37374898 - 37374819
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |     |||||||||||||||||||||||||||||||||||||    
T  37374898 aatatgttcttcacttaatctaatcattgaatccaactttccc-----gggaaaggattaacctttcccatgtgaaatgccacca 37374819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 8427746 - 8427821
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||| ||||||||||    
T  8427746 aatatgttcttcacttaatctaatcattaaatctaactttcccatggtgggaaaggattaaccttccccatgtgaa 8427821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 23584320 - 23584245
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  23584320 aatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgggaaaggattaacctgtcccatgtgaa 23584245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 23599143 - 23599068
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||| |||||||||||    
T  23599143 aatatgtttttcacttaatctaatcattgaatcgaactttcccatggtgggaaaggattaacctgtcccatgtgaa 23599068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 31014420 - 31014345
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| ||||||||    
T  31014420 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaatctttctcatgtgaa 31014345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 32 - 99
Target Start/End: Complemental strand, 41459204 - 41459138
Alignment:
Q  32 cttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  41459204 cttcacttaatctaatcattgaatc-aactttctcatggtgggaaaggattaacctttcccatgtgaa 41459138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 48219238 - 48219321
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||| ||| |||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||| ||||||||||    
T  48219238 aatatattcatcacttaatctaatcattgaatccaattttcccatggtgagaaagaattaacctttcccatgtaaaatgccacc 48219321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 24220662 - 24220587
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||| |||||||||||||| |||  |||||| |||||| ||||||||||||||||||||    
T  24220662 aatatgttcttcacttaatctgatcattgaatccaatttttccatggtaggaaagaattaacctttcccatgtgaa 24220587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 37374609 - 37374684
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||  ||| ||||||| | ||||| |||||||||||||    
T  37374609 aatatgttcttcacttaatctaatcattgaatccaactttcctatgatgggaaaaggttaacatttcccatgtgaa 37374684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 87
Target Start/End: Original strand, 47737676 - 47737739
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacct 87  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||||||||    
T  47737676 aatatgttcttcacttaatctaatcattgaatccaacattcccatggtgggaaatgattaacct 47737739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 48218674 - 48218599
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||| |||||||||||||||||||||||||||||||  ||| |||||||| |||||||||||| ||||||||    
T  48218674 aatatgttattcacttaatctaatcattgaatccaacttttccatagtgggaaaagattaacctttctcatgtgaa 48218599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 19555926 - 19556004
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatc---caactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||||   | |||||| |||| |||||||||||||||||||| ||||||||    
T  19555926 aatatgttcttcacttaatctaatcattgaatcctactactttcccatgatgggaaaggattaacctttctcatgtgaa 19556004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 41875619 - 41875694
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||   ||| ||||||| |||||||| ||||    
T  41875619 aatatgttcttcacttaatctaatcattgaacccaactttcccatggtaaaaaatgattaacttttcccatctgaa 41875694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 79
Target Start/End: Original strand, 49752913 - 49752968
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaagg 79  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||    
T  49752913 aatatattcttcacttaatctaatcattgaatccaactttcccatggtaggaaagg 49752968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 94
Target Start/End: Complemental strand, 47737146 - 47737077
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccat 94  Q
    |||||||||| |||||||||||||| ||||||||||||| | || |||||||||||| |||||||||||||    
T  47737146 aatatgttctccacttaatctaatcgttgaatccaacttaccca-ggtgggaaaggaataacctttcccat 47737077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 43658898 - 43658943
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatg 69  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  43658898 aatatgttcttcacttaatctaatcattgaatccaactttcccatg 43658943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 29342996 - 29343035
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaacttt 63  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  29342996 aatatgttcttcacttaatctaatcattgaatccaacttt 29343035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 50674707 - 50674637
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||| |||||||||||||     |||||||||||| |||||||||||| |||||||||||| ||||||||    
T  50674707 aatatgttctacacttaatctaat-----aatccaactttcccatggtgggaaaagattaacctttctcatgtgaa 50674637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 29 - 99
Target Start/End: Complemental strand, 43658332 - 43658263
Alignment:
Q  29 gttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||| |||||||| ||| ||  ||||||||||||| || |||||||||    
T  43658332 gttcttcacttaatctaatcattgaat-caactttcccatagtaagaaaggattaaccgtttccatgtgaa 43658263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 69 - 107
Target Start/End: Original strand, 49752973 - 49753011
Alignment:
Q  69 ggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||||||||||||    
T  49752973 ggtgggaaaggattaacctttcccatgtgaaatgccacc 49753011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 27 - 85
Target Start/End: Complemental strand, 50687182 - 50687124
Alignment:
Q  27 atgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaac 85  Q
    ||||| ||||||||||||||| |||||||||||||||||||| |||| |||| ||||||    
T  50687182 atgttattcacttaatctaattattgaatccaactttctcatagtggaaaagtattaac 50687124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 38575104 - 38575059
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatg 69  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||    
T  38575104 aatatgttcttcatttaatctaatcattgaatccaactttcccatg 38575059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 41040620 - 41040571
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||||||    
T  41040620 aactttttcatggtgagaaaggattcacctttcccatgtgaaatgccacc 41040571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 105
Target Start/End: Complemental strand, 43103982 - 43103901
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgcca 105  Q
    |||||||| ||||||||||| |||| |||||||||||||||  |||||||||||| |||  | ||| |||||||||| ||||    
T  43103982 aatatgttattcacttaatccaatcgttgaatccaactttcctatggtgggaaagaattggctttttccatgtgaaacgcca 43103901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 53269393 - 53269434
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  53269393 catggtgggaaaggattaacctttcccatgtgaaatgtcacc 53269434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 49752356 - 49752316
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttc 64  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  49752356 aatatgttcttcacttaatctaatcattgaatcctactttc 49752316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 38575645 - 38575684
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaacttt 63  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  38575645 aatatgttcttcacttaatttaatcattgaatccaacttt 38575684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 66 - 108
Target Start/End: Original strand, 38280303 - 38280345
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    |||||||||||||||||  ||||||||||||||||||||||||    
T  38280303 catggtgggaaaggattggcctttcccatgtgaaatgccacca 38280345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 38279458 - 38279417
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  38279458 aactttcccatggtgggaaaggattcacctttcccatgtgaa 38279417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 40887944 - 40887981
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaact 61  Q
    |||||||||||||||||||||||||||||||| |||||    
T  40887944 aatatgttcttcacttaatctaatcattgaatacaact 40887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 107
Target Start/End: Original strand, 49164706 - 49164738
Alignment:
Q  75 aaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||||||    
T  49164706 aaaggattaacctttcccatgtgaaatgccacc 49164738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 107
Target Start/End: Original strand, 24221179 - 24221267
Alignment:
Q  28 tgttcttcacttaatctaatcattgaatccaactttc-------tc--atggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||| |||||||| ||||||||||||       ||  |||||  ||||||||||||||||||||||||||||| ||||    
T  24221179 tgttcttcacttaatataatcattaaatccaactttcctaactttccgatggtaagaaaggattaacctttcccatgtgaaatgtcacc 24221267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 62
Target Start/End: Original strand, 32672786 - 32672824
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactt 62  Q
    |||||||||||| ||||||||||||||| ||||||||||    
T  32672786 aatatgttcttcgcttaatctaatcattaaatccaactt 32672824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 8424047 - 8424007
Alignment:
Q  67 atggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||| ||||||||||||| ||||| ||||    
T  8424047 atggtgggaaaggattcacctttcccatgttaaatgacacc 8424007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 31168569 - 31168609
Alignment:
Q  67 atggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||| |||||||||||||||||||||| ||||| ||||    
T  31168569 atggtggaaaaggattaacctttcccatgtaaaatgtcacc 31168609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 56 - 100
Target Start/End: Original strand, 43104529 - 43104573
Alignment:
Q  56 ccaactttctcatggtgggaaaggattaacctttcccatgtgaaa 100  Q
    ||||||||| |||| |||||||||||| ||||||||||| |||||    
T  43104529 ccaactttcccatgatgggaaaggattgacctttcccatatgaaa 43104573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 81; Significance: 3e-38; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 3957583 - 3957499
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3957583 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacca 3957499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 4929509 - 4929593
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  4929509 aatatattcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgccacca 4929593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 33430125 - 33430042
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| ||||||||||||||||||    
T  33430125 aatatgttcttcacttaatctaatcattgaatccaactttc-catggtaggaaaggattaaccttttccatgtgaaatgccacca 33430042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 5324406 - 5324489
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||| ||||    
T  5324406 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtatgaaagaattaacctttcccatgtgaaatgtcacc 5324489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 8813686 - 8813769
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||| ||||||||||||    
T  8813686 aatatgttctttacttaatctaatcattgaatccaactttcccatgatggaaaaggattaacctttcccatatgaaatgccacc 8813769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 26687583 - 26687508
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||    
T  26687583 aatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgtgaa 26687508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 26957314 - 26957239
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||| | |||||||||||||||||||||||||    
T  26957314 aatatgttcttcacttaatctaatcattgaatctaactttcccatggtagaaaaggattaacctttcccatgtgaa 26957239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 3739666 - 3739741
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||  ||||| |||||||    
T  3739666 aatatgttcttcacttaatctaatcattgaatccaactttctcatagtaggaaaggattaagttttcctatgtgaa 3739741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 4928954 - 4928879
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||| |||||||||||   ||||||||||||||||||| |||||||||||||    
T  4928954 aatatgttcttcacttaatctaatcattaaatccaacttttctatggtgggaaaggattaacttttcccatgtgaa 4928879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 28075972 - 28076055
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||| ||| ||||||||||| |||||||||||| ||||    
T  28075972 aatatatttttcacttaatctaatcattgaatccaactttcccatggtggaaaatgattaaccttttccatgtgaaatgtcacc 28076055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 3958137 - 3958212
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||| |||||||| |||||||   || |||||||||||||||||||||||||||||    
T  3958137 aatatgttcttcacttaatctaattattgaatcaaactttccattgatgggaaaggattaacctttcccatgtgaa 3958212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 21770081 - 21770002
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatc----caactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||||    |||||||| |||||||| |||||||||||||||||||| ||||    
T  21770081 aatatgttcttcacttaatctaatcattgaatccaaccaactttcccatggtggaaaaggattaacctttcccatatgaa 21770002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 42408075 - 42408011
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctt 88  Q
    ||||||||||||| |||||||||||||||||||||| |||| ||| |||||||| ||||||||||    
T  42408075 aatatgttcttcatttaatctaatcattgaatccaattttcccatagtgggaaaagattaacctt 42408011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 39149468 - 39149519
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaa 109  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  39149468 aactttcccatggtgggaaaggattcacctttcccatgtgaaatgccaccaa 39149519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 26688060 - 26688135
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||| ||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||    
T  26688060 aatatgttcttcacttaatataatcattgaatctag--------tggtgggaaaggattaacctttcccatgtgaaatgccacc 26688135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 26957791 - 26957866
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||| ||||||||||||| |         ||||||||||||||||||||||||||||||||||||||||    
T  26957791 aatatgttcttcacttaatataatcattgaatctag--------tggtgggaaaggattaacctttcccatgtgaaatgccacc 26957866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 5324368 - 5324312
Alignment:
Q  43 ctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||| |||| | |||||||||||| ||||||||||||||    
T  5324368 ctaatcattgaatccaactttcccatgataggaaaggattaagctttcccatgtgaa 5324312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 13738143 - 13738061
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||| |||||||||||||||||||| ||| || | ||| |||   || ||||||||||||||||||||    
T  13738143 aatatgttcttcacttaatccaatcattgaatccaactttcccatagtagaaaatgatgggcc-ttcccatgtgaaatgccacc 13738061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 63
Target Start/End: Original strand, 42408568 - 42408607
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaacttt 63  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42408568 aatatgttcttcacttaatctaatcattgaatccaacttt 42408607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 49 - 99
Target Start/End: Complemental strand, 8813135 - 8813085
Alignment:
Q  49 attgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| ||||    
T  8813135 attgaatccaactttcccatggtgggagaggattaacctttcccatatgaa 8813085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 25075034 - 25075074
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtga 98  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  25075034 aactttcccatggtgggaaaggattaacctttcccatgtga 25075074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 98
Target Start/End: Original strand, 25133003 - 25133043
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtga 98  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  25133003 aactttcccatggtgggaaaggattaacctttcccatgtga 25133043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 25074362 - 25074283
Alignment:
Q  28 tgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||| ||||||||||  || |||  ||||||| |||||||| ||| |||||||| || |||||||||||||||||    
T  25074362 tgttcttcaattaatctaatggttaaatttaactttcccatggtggaaaaagattaaccatttccatgtgaaatgccacc 25074283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 28 - 107
Target Start/End: Complemental strand, 25132331 - 25132252
Alignment:
Q  28 tgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||| ||||||||||  || |||  ||||||| |||||||| ||| |||||||| || |||||||||||||||||    
T  25132331 tgttcttcaattaatctaatggttaaatttaactttcccatggtggaaaaagattaaccatttccatgtgaaatgccacc 25132252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 113
Target Start/End: Complemental strand, 38064191 - 38064136
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaaatat 113  Q
    ||||||| |||||||||||||  || ||| ||||||||||||||||||||||||||    
T  38064191 aactttcccatggtgggaaagttttcacccttcccatgtgaaatgccaccaaatat 38064136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 3739083 - 3739038
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatg 69  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||    
T  3739083 aatatatttttcacttaatctaatcattgaatccaactttcccatg 3739038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 81; Significance: 3e-38; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 199229 - 199313
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  199229 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacca 199313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 40847760 - 40847677
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40847760 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaaccttttccatgtgaaatgccacc 40847677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 109
Target Start/End: Original strand, 2713846 - 2713931
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  2713846 aatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgccaccaa 2713931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 12640048 - 12639963
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  12640048 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgccaccaa 12639963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 388836 - 388753
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  388836 aatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 388753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 25370395 - 25370478
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||    
T  25370395 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtaaaatgccacc 25370478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 55815908 - 55815825
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||    
T  55815908 aatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaaatgccacc 55815825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 31876871 - 31876787
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||||||||||||    
T  31876871 aatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaacctttcccatgtgaaatgccacca 31876787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 20075608 - 20075533
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20075608 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 20075533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 26423842 - 26423767
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  26423842 aatatgttcttcacttaatctaatcattgaatccaactttttcatggtgggaaaggattaacctttcccatgtgaa 26423767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 48091098 - 48091181
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||||    
T  48091098 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatatgaaatgccacc 48091181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 55816453 - 55816528
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  55816453 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 55816528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 33569803 - 33569719
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  33569803 aatatgttcttcacttaatctaattattgaatccaacttttccatggtgggaaaggattgacctttcccatgtgaaatgccacca 33569719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 20422734 - 20422817
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||||||||||||||||||    
T  20422734 aatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtgaaatgccacc 20422817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 32291098 - 32291015
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| | ||||| |||||||||||||||||||||||||||||    
T  32291098 aatatgttcttcacttaatctaatcattgaatccaactttcccatgattggaaatgattaacctttcccatgtgaaatgccacc 32291015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 36945226 - 36945301
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  36945226 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 36945301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 52597714 - 52597797
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||  |||||||||||||||||||||||||||||||||    
T  52597714 aatatgttcttcacttaatctaatcattgaatccaactttcctatggtgaaaaaggattaacctttcccatgtgaaatgccacc 52597797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 26424407 - 26424489
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccac 106  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||| |||| | |||||||||||||||||||||||||    
T  26424407 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtggaaaagaactaacctttcccatgtgaaatgccac 26424489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 199082 - 199007
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  199082 aatatgttcttcacttaatctaatcattgaatttaactttcccatggtgggaaaggattaacctttcccatgtgaa 199007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 389408 - 389483
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  389408 aatatgttcttcacttaatctaatcactgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaa 389483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 12640589 - 12640664
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  12640589 aatatgttcttcgcttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgtgaa 12640664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 25369866 - 25369791
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  25369866 aatatgttcttcacttaatctaatcattgaatccaactttcccatagtggaaaaggattaacctttcccatgtgaa 25369791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 28223646 - 28223571
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||    
T  28223646 aatatgttcttcacttaatctaatcattgaatccaactttctcatagagggaaaagattaacctttcccatgtgaa 28223571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 36111220 - 36111294
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  36111220 aatatgttcttcacttaatctaatcattgaatccaa-tttcccatggtgggaaaggattaacctttcccatgtgaa 36111294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 37567477 - 37567560
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||| ||||    
T  37567477 aatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaagtattaacctttcccatgtgaaatgacacc 37567560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 48090549 - 48090474
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  48090549 aatatgttctacacttaatctaatcattgaatccaactttcccatggtgggaatggattaacctttcccatgtgaa 48090474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 48782077 - 48782152
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||    
T  48782077 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgcgaaatgattaacctttcccatgtgaa 48782152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 52597573 - 52597498
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||    
T  52597573 aatatgttcttcacttaatctaatcattgaatctaactttcccatggtgggaaaagattaacctttcccatgtgaa 52597498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 29809090 - 29809177
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaaat 111  Q
    |||||||||||||||||||||||||||||||| |||||||| |||| |  |||| |||||||||||||||| ||||||||||||||||    
T  29809090 aatatgttcttcacttaatctaatcattgaattcaactttcccatgataagaaatgattaacctttcccatatgaaatgccaccaaat 29809177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 36944693 - 36944610
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||| ||| |||||||||||| | ||||||||||||||    
T  36944693 aatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaagattaacctttcacgtgtgaaatgccacc 36944610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 40345133 - 40345208
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| |||||||| |||||||||||||||||||||    
T  40345133 aatatgttcttcacttaatctaatcattgaatctaactttcccattgtgggaaaagattaacctttcccatgtgaa 40345208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 32901934 - 32901852
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccac 106  Q
    ||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||||| | | ||||||||||||||||||||    
T  32901934 aatatgttctttacttaatctaatcattgaatccaactttcccatggtggaaaaggataatcttttcccatgtgaaatgccac 32901852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 32902468 - 32902543
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||  ||||||||||| ||||||||    
T  32902468 aatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaatattaacctttctcatgtgaa 32902543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 35427328 - 35427254
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||| || |||||||||||||||||||||||||    
T  35427328 aatatgttcttcacttaatctaatcattgaatccaa-tttcccatggcggaaaaggattaacctttcccatgtgaa 35427254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 24 - 114
Target Start/End: Complemental strand, 6862730 - 6862640
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaaatatt 114  Q
    ||||||||||||||||||||||||| |||||||||||||||  ||||| | ||| |||| |||||||| ||||||||||||||||| ||||    
T  6862730 aatatgttcttcacttaatctaatctttgaatccaactttcctatggtagaaaaagattgacctttcctatgtgaaatgccaccaattatt 6862640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 20422205 - 20422139
Alignment:
Q  33 ttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||||    
T  20422205 ttcacttaatctaatcattgaatctacctttcccatggtgggaaaggattaacctttcccatgtgaa 20422139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 24 - 101
Target Start/End: Complemental strand, 40344586 - 40344509
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaat 101  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||| || ||||||||||| ||||||||| ||||||    
T  40344586 aatatgttcttcacttaatctaataatttaatccaactttctcatgatgagaaaggattaaactttcccatatgaaat 40344509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 40848133 - 40848208
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| ||| |||| ||||||||||| |||||||||    
T  40848133 aatatgttcttcacttaatctaatcattgaatcaaactttcccatagtgagaaatgattaaccttttccatgtgaa 40848208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 21 - 107
Target Start/End: Original strand, 31842723 - 31842808
Alignment:
Q  21 aataatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||| ||||||||||||  |||| ||||| ||||    
T  31842723 aataatatgttcttcacttaatctaatcattgaatcc-actttcccatggttggaaatgattaacctttcatatgtaaaatgtcacc 31842808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 30 - 107
Target Start/End: Complemental strand, 47321836 - 47321759
Alignment:
Q  30 ttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||| |||||||||||  ||| |||  |||||||||||||||||||| ||||||||||||    
T  47321836 ttcttcacttaatctaatcattaaatccaacttttccatagtgataaaggattaacctttcccatatgaaatgccacc 47321759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 68
Target Start/End: Original strand, 20076189 - 20076233
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcat 68  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  20076189 aatatgttcttcacttaatctaatcattgaatccaactttctcat 20076233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 99
Target Start/End: Complemental strand, 3708854 - 3708787
Alignment:
Q  26 tatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||      ||||||||||||||||||||||    
T  3708854 tatgttctttacttaatctaatcattgaatccaactttcccatggt------ggattaacctttcccatgtgaa 3708787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 18501780 - 18501739
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  18501780 catggtgggaaaggattaacctttcccatgtgaaatgccacc 18501739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 89
Target Start/End: Original strand, 31877435 - 31877500
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaaccttt 89  Q
    |||||||||||||||||||||||||||| |||||||||||| ||| |||  |||||||||| ||||    
T  31877435 aatatgttcttcacttaatctaatcattaaatccaactttcccatagtgaaaaaggattaaacttt 31877500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 107
Target Start/End: Original strand, 35428238 - 35428286
Alignment:
Q  59 actttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  35428238 actttcccatggtgggaaaggattaacctttcccatctgaaatgccacc 35428286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 110
Target Start/End: Original strand, 33570311 - 33570365
Alignment:
Q  56 ccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaaa 110  Q
    |||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||    
T  33570311 ccaactttcttatggtggaaaaggattgaccttttccatgtgaaatgccaccaaa 33570365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 91
Target Start/End: Original strand, 47328399 - 47328466
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcc 91  Q
    |||||||||||||||||||||||| |||||||| ||||||  ||| || ||||| ||| |||||||||    
T  47328399 aatatgttcttcacttaatctaattattgaatctaacttttccatagtaggaaaagatgaacctttcc 47328466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 58 - 109
Target Start/End: Original strand, 52870153 - 52870204
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaa 109  Q
    ||||||| |||| ||| |||||||| ||||||||||||||||||||||||||    
T  52870153 aactttcccatgatggaaaaggattcacctttcccatgtgaaatgccaccaa 52870204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 100
Target Start/End: Complemental strand, 45772212 - 45772170
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaa 100  Q
    |||||||| ||||||||||||||||||||||| ||||||||||    
T  45772212 aactttcttatggtgggaaaggattaaccttttccatgtgaaa 45772170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 100
Target Start/End: Original strand, 45778725 - 45778766
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaa 100  Q
    |||||||| ||||||||||||||||||||||||||||||||||    
T  45778725 aactttct-atggtgggaaaggattaacctttcccatgtgaaa 45778766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 33758132 - 33758173
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||| ||||||||||||||||||| ||||    
T  33758132 catggtgggaaaggattgacctttcccatgtgaaatgacacc 33758173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 37566986 - 37566941
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatg 69  Q
    ||||||||||||||||||| ||||||||||||| || |||||||||    
T  37566986 aatatgttcttcacttaatttaatcattgaatctaattttctcatg 37566941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 52869496 - 52869455
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||| ||||||||||||||||| ||||||||||||||||    
T  52869496 aactttcccatggtgggaaaggattcacctttcccatgtgaa 52869455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 39844936 - 39844896
Alignment:
Q  67 atggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  39844936 atggtgggaaaggattcccctttcccatgtgaaatgccacc 39844896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 63
Target Start/End: Complemental strand, 48781565 - 48781526
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaacttt 63  Q
    ||||| ||| ||||||||||||||||||||||||||||||    
T  48781565 aatatattcatcacttaatctaatcattgaatccaacttt 48781526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 198202 - 198153
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||| ||| |||| |||||| |||||| ||||||||||    
T  198202 aactttctcatggtggaaaaagattcaccttttccatgttaaatgccacc 198153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 99
Target Start/End: Original strand, 3221424 - 3221465
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||    
T  3221424 aactttcccatcgtgggaaaggattcacctttcccatgtgaa 3221465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 81; Significance: 3e-38; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 9224349 - 9224265
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  9224349 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacca 9224265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 4386963 - 4387046
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  4386963 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 4387046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 20244174 - 20244258
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  20244174 aatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccatgtgaaatgccacca 20244258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 7716754 - 7716671
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||    
T  7716754 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttcccatgtgaaatgccacc 7716671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 28223871 - 28223788
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  28223871 aatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaaggattaacctttcccatgtgaaatgccacc 28223788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 6849371 - 6849296
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6849371 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 6849296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 6849545 - 6849628
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||    
T  6849545 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtaaaatgccacc 6849628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 16571201 - 16571118
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  16571201 aatatgtttttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatggcacc 16571118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 28224391 - 28224466
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  28224391 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 28224466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 7583796 - 7583880
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    |||||||||||||||||| |||||||||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||    
T  7583796 aatatgttcttcacttaagctaatcattgaatccaactttcccatagtgggaaaagattaacctttcccatgtgaaatgccacca 7583880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 10883370 - 10883295
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10883370 aatatgttctttacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 10883295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 16887666 - 16887591
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  16887666 aatatgttcttcacttaatctaatcattgaatccaactatcccatggtgggaaaggattaacctttcccatgtgaa 16887591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 102
Target Start/End: Original strand, 16903092 - 16903170
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatg 102  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  16903092 aatatgttattcacttaatctaatcattgaatccaactttctcatggtggaaaaggattaacctttcccatgtaaaatg 16903170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 8113303 - 8113383
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgcc 104  Q
    |||||||||||||| |||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||||||||||    
T  8113303 aatatgttcttcacataatctaatcatcgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaaatgcc 8113383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 3595329 - 3595254
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||    
T  3595329 aatatgttcttcactttatctaatcattgaatccaactttcccatggtgggaaagaattaacctttcccatgtgaa 3595254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 7583215 - 7583140
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  7583215 aatatgttcttcacctaatctaatcattgaatccaattttctcatggtgggaaaggattaacctttccgatgtgaa 7583140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 8963587 - 8963504
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||| |||||||||||||||||||||||||||||||| |||| | | |||||||||||||||||||||||||||||||||    
T  8963587 aatatgtttttcacttaatctaatcattgaatccaactttcccatgatagaaaaggattaacctttcccatgtgaaatgccacc 8963504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 11256743 - 11256826
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||| ||||||||||    
T  11256743 aatatattcttcacttaatctaatcattgaatccaactttctcatggtggaaaatgattaaccttttccatgtaaaatgccacc 11256826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 30162016 - 30161933
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||||||| ||||||| |||||||||||||    
T  30162016 aatatgttcttcacttaatctaatcattgaatccaacttttccatgatgggaaaggattaacttttcccacgtgaaatgccacc 30161933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 39477328 - 39477403
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||    
T  39477328 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatatgaa 39477403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 11256199 - 11256124
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||| |||| |||||||||||||||||||||    
T  11256199 aatatgttcttcacttaatctaatcattgaatccaactttaccatggtgagaaatgattaacctttcccatgtgaa 11256124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 16571729 - 16571804
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||| ||||||||||||||||||| |||| |||| |||||||||||||||||||||||||||||    
T  16571729 aatatgttcttcacttgatctaatcattgaatccaattttcccatgatgggaaaggattaacctttcccatgtgaa 16571804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 98
Target Start/End: Original strand, 40166846 - 40166920
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtga 98  Q
    ||||||||||| |||||||||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||    
T  40166846 aatatgttcttgacttaatctaatcattgaatccaattttcccatggtgggaaaggattaacctttcctatgtga 40166920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 112
Target Start/End: Complemental strand, 33847956 - 33847868
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaaata 112  Q
    ||||||||||||||||||||||||  ||||||||| ||||| |||||||| ||||||||  ||||||||||||||||||||||| ||||    
T  33847956 aatatgttcttcacttaatctaattgttgaatccatctttcccatggtggaaaaggattggcctttcccatgtgaaatgccacccaata 33847868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 7717288 - 7717362
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||| ||||||||||||| ||||||| ||||||| ||||||||||||||||||||||||||    
T  7717288 aatatgttcttcacttaatataatcattgaatc-aactttcccatggtgagaaaggattaacctttcccatgtgaa 7717362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 3595898 - 3595981
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||| |||||||||||||||||||||||||||||||  |||| ||  ||||||||||| |||||||||||||||| ||||    
T  3595898 aatatgtttttcacttaatctaatcattgaatccaacttttccatgatgaaaaaggattaacatttcccatgtgaaatgtcacc 3595981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 40165956 - 40165873
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||| |||||||||||||||||||| |||||||| ||| ||||   ||||||||||||||||| ||||    
T  40165956 aatatgttcttcacttaatccaatcattgaatccaactttcccatggtggaaaatgattggtctttcccatgtgaaatgtcacc 40165873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 33 - 99
Target Start/End: Complemental strand, 8112754 - 8112688
Alignment:
Q  33 ttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||| ||||||||    
T  8112754 ttcacttaatctaatcattgaatccaactttcccatggtgagaaaggattaacatttctcatgtgaa 8112688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 20243636 - 20243579
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggat 81  Q
    ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20243636 aatatattcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggat 20243579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 40 - 99
Target Start/End: Complemental strand, 4386422 - 4386363
Alignment:
Q  40 aatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  4386422 aatctaatcattgaatccaactttcctatggtgggaaagtattaacctttcccatgtgaa 4386363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 56 - 107
Target Start/End: Complemental strand, 12206839 - 12206788
Alignment:
Q  56 ccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  12206839 ccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgtcacc 12206788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 24 - 88
Target Start/End: Complemental strand, 39476598 - 39476534
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctt 88  Q
    ||||| ||||||||||||||||||||||||||  ||||||| ||| |||||||||||||||||||    
T  39476598 aatatattcttcacttaatctaatcattgaattaaactttcccatagtgggaaaggattaacctt 39476534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 24 - 78
Target Start/End: Complemental strand, 467188 - 467134
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaag 78  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||    
T  467188 aatatgttcttcacttaatttaatcattgaatccaactttcccatggtggaaaag 467134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 92
Target Start/End: Original strand, 467344 - 467412
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttccc 92  Q
    ||||||||||||||||||| |||| ||||||| ||||||| ||| ||||| ||| ||||||||||||||    
T  467344 aatatgttcttcacttaatttaattattgaattcaactttttcacggtggaaaatgattaacctttccc 467412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 18950534 - 18950582
Alignment:
Q  60 ctttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||| |||||||||||||||||||||||| |||| |||||||||||||    
T  18950534 ctttcccatggtgggaaaggattaaccttttccatatgaaatgccacca 18950582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 9958740 - 9958790
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    |||||||| |||||||||||||||| | ||||||||||| |||||||||||    
T  9958740 aactttcttatggtgggaaaggattgatctttcccatgttaaatgccacca 9958790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 43743842 - 43743888
Alignment:
Q  61 tttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||| ||||||||||||||||| ||||||||||||||||||| ||||    
T  43743842 tttcccatggtgggaaaggattcacctttcccatgtgaaatgtcacc 43743888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 32471988 - 32471939
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||| ||||||||||||||||  ||||||||||||| ||||||||||    
T  32471988 aactttcccatggtgggaaaggatccacctttcccatgttaaatgccacc 32471939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 17918104 - 17918032
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgt 96  Q
    ||||| ||||||||||||||||||||||||||| ||||||  |||   |  |||||||||||||||| |||||    
T  17918104 aatatattcttcacttaatctaatcattgaatctaacttttccataaagaaaaaggattaacctttctcatgt 17918032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 107
Target Start/End: Complemental strand, 18949957 - 18949909
Alignment:
Q  59 actttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||| ||||||| |||| ||||||| |||||||||||||||||||||    
T  18949957 actttcccatggtgagaaaagattaacttttcccatgtgaaatgccacc 18949909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 102
Target Start/End: Original strand, 33848496 - 33848542
Alignment:
Q  56 ccaactttctcatggtgggaaaggattaacctttcccatgtgaaatg 102  Q
    ||||||||| |||| ||||||| |||| |||||||||||||||||||    
T  33848496 ccaactttcccatgatgggaaaagattgacctttcccatgtgaaatg 33848542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Original strand, 44829315 - 44829365
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    |||||||  ||||||| |||||||| ||| |||||||||||||||||||||    
T  44829315 aactttcctatggtggaaaaggattcaccattcccatgtgaaatgccacca 44829365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 27 - 107
Target Start/End: Original strand, 12207391 - 12207472
Alignment:
Q  27 atgttcttcacttaatctaatcattgaatccaacttt-ctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||| |||||| ||||||| ||| ||||||| | | |||||| ||||| || || |||||||| ||||||||||||    
T  12207391 atgttcttcatttaatccaatcattaaattcaacttttcccgtggtggaaaagggttgacttttcccatatgaaatgccacc 12207472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 56
Target Start/End: Original strand, 17918688 - 17918720
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatc 56  Q
    |||||||||||||||||||||||| ||||||||    
T  17918688 aatatgttcttcacttaatctaataattgaatc 17918720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 1e-37; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 7818557 - 7818474
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  7818557 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 7818474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 33114191 - 33114274
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33114191 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgccacc 33114274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 16889278 - 16889193
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaa 109  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||    
T  16889278 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaagattaacctttcccatgtgaaatgccaccaa 16889193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 35237342 - 35237257
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaa 109  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||    
T  35237342 aatatgttattcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaaatgtcaccaa 35237257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 11999083 - 11999166
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  11999083 aatatgttcttcacttcatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaaatgccacc 11999166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 39852237 - 39852154
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  39852237 aatatgttcttcacttaatctaatcattgaatcaaactttcccatggtgggaaaggattaacctttcccatttgaaatgccacc 39852154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 109
Target Start/End: Complemental strand, 16879971 - 16879886
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaa 109  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||| |||||||||||||||||||||||    
T  16879971 aatatgttcttcacttaatctaatcattgaatccaactttctcatgataggaaatgattaacttttcccatgtgaaatgccaccaa 16879886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 11998539 - 11998464
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  11998539 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaa 11998464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 21 - 110
Target Start/End: Original strand, 44062596 - 44062685
Alignment:
Q  21 aataatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaaa 110  Q
    |||||||| |||| |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||    
T  44062596 aataatatattctccacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcctatatgaaatgccaccaaa 44062685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 16880521 - 16880596
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||||||||||||||    
T  16880521 aatatgttcttcacttaatctaatcattgaatctaactttcacatggtgggaaaggattaatctttcccatgtgaa 16880596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 43480699 - 43480616
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||  ||| |||||||||||||||||||||||||||||    
T  43480699 aatatgttcttcacttaatctaatcatttaatccaactttcccatggtgtaaaaagattaacctttcccatgtgaaatgccacc 43480616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 43481284 - 43481359
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||    
T  43481284 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttttcatgtgaa 43481359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 43591090 - 43591015
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  43591090 aatatgttcttcatttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgtgaa 43591015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 4374995 - 4375079
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||| | ||||||||| |||||||||||||    
T  4374995 aatatgttcttcacttaatccaatcattgaatccaactttctcatggtggaaaatgattcatctttcccatatgaaatgccacca 4375079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 7819100 - 7819175
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| |||||||||||| |||||| ||||||||||||||    
T  7819100 aatatgttcttcacttaatctaatcattgaatctaactttcgcatggtgggaaaagattaatctttcccatgtgaa 7819175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 30115999 - 30116074
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||| ||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||    
T  30115999 aatatattctttacttaatctaatcattgaatccaactttcccatggtggaaaaggattaacctttcccatgtgaa 30116074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 36848200 - 36848275
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||| |||||||||| ||||||||||||||    
T  36848200 aatatgttcttcacttaatctaatcattgaatccaacttttccatggtggaaaaggattaagctttcccatgtgaa 36848275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 40309503 - 40309586
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||| | |||||||||| ||||    
T  40309503 aatatgttcttcacttaatctaatcattgaatccaactttcctatggtgggaaatgattaaccttttctatgtgaaatgtcacc 40309586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 40907681 - 40907607
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||| ||||||| | ||||||||||||||||||||||||||||||||    
T  40907681 aatatgttcttcacttaatctaatcattgaatc-aactttcccgtggtgggaaaggattaacctttcccatgtgaa 40907607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 43591619 - 43591702
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||| || ||||||| ||||||||||||  ||||||||||||||||||||||| ||||    
T  43591619 aatatgttcttcacttaatctaatcattgactctaactttcccatggtgggaaataattaacctttcccatgtgaaatgacacc 43591702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 44062068 - 44061993
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| |||||| ||||||||||| ||||||||    
T  44062068 aatatgttcttcacttaatctaatcattgaatccaactttcccatggttggaaagtattaacctttctcatgtgaa 44061993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 30115450 - 30115361
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaa------cctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||      |||||||||||||||||||||||    
T  30115450 aatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaaccttatcctttcccatgtgaaatgccacc 30115361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 97
Target Start/End: Complemental strand, 33113658 - 33113585
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtg 97  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  33113658 aatatattcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaatctttcccatgtg 33113585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 24 - 89
Target Start/End: Complemental strand, 38778237 - 38778172
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaaccttt 89  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||    
T  38778237 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaaccttt 38778172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 112
Target Start/End: Original strand, 10806440 - 10806528
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaaata 112  Q
    ||||||||||| ||||||| ||||||||||||| ||||||| |||||| ||||| |||||||||||||||||||||||| || ||||||    
T  10806440 aatatgttctttacttaatttaatcattgaatcaaactttcccatggtaggaaaagattaacctttcccatgtgaaatggcatcaaata 10806528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 16889831 - 16889905
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| ||||||||||||    
T  16889831 aatatgttcttcacttaatctaataattgaatccaactttcccatggtgggaaatgattaacc-ttcccatgtgaa 16889905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 38778798 - 38778873
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||| |||| |||||||||||| ||||||||    
T  38778798 aatatattcttcacttaatctaatcattgaatacaactttctcatggtgagaaatgattaacctttctcatgtgaa 38778873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 35237867 - 35237941
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||| |||||||| |  ||||| |||||||||||||||||||||||||||||||||    
T  35237867 aatatgttcttcacttaatctaattattgaatcaacttttct-atggtgggaaaggattaacctttcccatgtgaa 35237941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 39852806 - 39852881
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||| |||||||||||||||||| |||||||| |||||| | |||||||||||||||||||||||| ||||||||    
T  39852806 aatatattcttcacttaatctaataattgaatctaacttttttatggtgggaaaggattaacctttctcatgtgaa 39852881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 2209089 - 2209032
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggat 81  Q
    |||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||    
T  2209089 aatatgttattcacttaatctaatcattgaatcgaactttctcatggtgggaaaggat 2209032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 4373769 - 4373694
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||| |||||||||||| ||||||||  ||| ||||||| ||||||| |||||||||||||    
T  4373769 aatatgttcttcacttaatataatcattgaattcaactttcctatgatgggaaatgattaacatttcccatgtgaa 4373694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 37532618 - 37532576
Alignment:
Q  65 tcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  37532618 tcatggtgggaaaggattaacctttcccatgtgaaatgccacc 37532576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 69
Target Start/End: Original strand, 4374304 - 4374349
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatg 69  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  4374304 aatatgttcttcacttaatctaatcattgaatccaactttcccatg 4374349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 66 - 107
Target Start/End: Complemental strand, 41761840 - 41761799
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  41761840 catggtgggaaaggattaacctttcccatgtgaaatgccacc 41761799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 10806031 - 10805991
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttc 64  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  10806031 aatatgttcttcatttaatctaatcattgaatccaactttc 10805991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 70 - 107
Target Start/End: Original strand, 32667532 - 32667569
Alignment:
Q  70 gtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  32667532 gtgggaaaggattaacctttcccatgtaaaatgccacc 32667569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 41762523 - 41762564
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||| |||||| ||||||||||||||||||||||    
T  41762523 catggtgggaaaagattaaactttcccatgtgaaatgccacc 41762564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 99
Target Start/End: Original strand, 37533323 - 37533355
Alignment:
Q  67 atggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||||    
T  37533323 atggtgggaaaggattaacctttcccatgtgaa 37533355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 56 - 105
Target Start/End: Complemental strand, 4374496 - 4374447
Alignment:
Q  56 ccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgcca 105  Q
    |||||||||  ||||||||||| |||| ||||||| ||||||||||||||    
T  4374496 ccaactttcctatggtgggaaaagattgacctttctcatgtgaaatgcca 4374447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 107
Target Start/End: Complemental strand, 43433860 - 43433811
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||| |||||||||||| ||||  |||||||||||| ||||||||||    
T  43433860 aactttcccatggtgggaaatgattcccctttcccatgttaaatgccacc 43433811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 43434709 - 43434750
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||| |||| ||||||||||||| ||||||||||    
T  43434709 catggtgggaaaagattcacctttcccatgttaaatgccacc 43434750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 96
Target Start/End: Complemental strand, 38572301 - 38572233
Alignment:
Q  28 tgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgt 96  Q
    ||||||||| ||||||||||  || ||   ||||||| |||||||||||| |||| |||||||||||||    
T  38572301 tgttcttcaattaatctaatggtttaagttaactttcccatggtgggaaaagattgacctttcccatgt 38572233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0229 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 15236 - 15319
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||    
T  15236 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaaccttttccatgtgaaatgccacc 15319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 36682918 - 36682835
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  36682918 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaaatgccacc 36682835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 27855648 - 27855566
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  27855648 aatatgttcttcacttaatctaatcattgaatc-aactttctcatggtgggaaatgattaacctttcccatgtgaaatgccacc 27855566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 36683467 - 36683542
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36683467 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 36683542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 24 - 108
Target Start/End: Complemental strand, 42456004 - 42455920
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||||||||||| |||||||||||||||| |||| | |||||||||||||||||||||||||||||||||||||||||    
T  42456004 aatatgttcttcacttaatttaatcattgaatccaattttcccgtggtgggaaaggattaacctttcccatgtgaaatgccacca 42455920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 34853474 - 34853399
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  34853474 aatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcccatgtgaa 34853399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 42456519 - 42456594
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  42456519 aatatgttcttcacttaatgtaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 42456594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 47814054 - 47813971
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||  ||||||||||||    
T  47814054 aatatgttcttcacttaatctaatcattgaatccaacttttccatggtgggaaaggattaacctttcccacatgaaatgccacc 47813971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 47814638 - 47814713
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  47814638 aatatgttcttcacttaatctaatcattgaatccaactttcccatggtgggaaaggattaagctttcccatgtgaa 47814713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 101
Target Start/End: Original strand, 22276079 - 22276156
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaat 101  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||    
T  22276079 aatatgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtaaaat 22276156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 4895085 - 4895165
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgcc 104  Q
    |||||||||||||||||||||||| |||||||||||||||| |||||||| ||| ||||||||||||||||||||||||||    
T  4895085 aatatgttcttcacttaatctaataattgaatccaactttcccatggtggaaaatgattaacctttcccatgtgaaatgcc 4895165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 104
Target Start/End: Original strand, 19816895 - 19816975
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgcc 104  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||| |||||||||    
T  19816895 aatatgttcttcacttaatctaatcatttaatccaactttcccatggtggaaaaggattaacctttcccatatgaaatgcc 19816975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 19816347 - 19816272
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  19816347 aatatgttttacacttaatctaatcattgaatccaactttcccatggtgggaaaggattaacctttcccatgtgaa 19816272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 24044046 - 24044121
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||  ||||||| ||||||||||||||||||||||||||||||||||    
T  24044046 aatatgttcttcacttaatctaatcattgaataaaactttcccatggtgggaaaggattaacctttcccatgtgaa 24044121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 34853999 - 34854082
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||||| || |||||||  |||||||||||||||||||||||||||||||||||| ||||    
T  34853999 aatatgttcttcacttaatctaatcattgactctaactttcctatggtgggaaaggattaacctttcccatgtgaaatggcacc 34854082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 46732650 - 46732567
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||| |||||||||||||||||||||||||||||||  ||| ||||||||| ||||||||||||||||||||||||||||    
T  46732650 aatatgttattcacttaatctaatcattgaatccaacttttccatagtgggaaagaattaacctttcccatgtgaaatgccacc 46732567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 24 - 96
Target Start/End: Complemental strand, 46814488 - 46814416
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgt 96  Q
    ||||||||||||||||||||||||| |||||| |||||||| |||||||||||||||||||||||||||||||    
T  46814488 aatatgttcttcacttaatctaatcgttgaattcaactttcccatggtgggaaaggattaacctttcccatgt 46814416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 91
Target Start/End: Complemental strand, 4894582 - 4894515
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcc 91  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  4894582 aatatgttcttcacttaatctaatcattgaattcaactttcccatggtgggaaaggattaacctttcc 4894515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 46815065 - 46815148
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||||| ||||||||||||||||||||||||||| ||||||||||||  ||||| |||| ||||||||||||||||||    
T  46815065 aatatgttcttcatttaatctaatcattgaatccaactttcccatggtgggaaataattaa-cttttccatgtgaaatgccacca 46815148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 22275507 - 22275433
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||| ||||||||||| |||||||||    
T  22275507 aatatgttcttcacttaatctaatcattgaat-caactttcccatggtgggaaatgattaaccttttccatgtgaa 22275433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 21 - 107
Target Start/End: Complemental strand, 36620204 - 36620118
Alignment:
Q  21 aataatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||| |||||||||| |||||||||||| ||||||||||||| | | ||| |||||||||||||||| ||||||||||||    
T  36620204 aataatatgtttttcacttaatttaatcattgaattcaactttctcatgatagaaaaagattaacctttcccatatgaaatgccacc 36620118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 24323985 - 24324059
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||| ||||||||||| |||| ||| |||||||| |||||||||||||||||||||    
T  24323985 aatatgttcttcacttaatctaattattgaatccaa-tttcccatagtgggaaatgattaacctttcccatgtgaa 24324059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 30711871 - 30711796
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||| |||||||||||||||  ||||||||||||  |||||||||| |||||||||    
T  30711871 aatatgttcttcacttaatctaataattgaatccaacttttccatggtgggaaaaaattaaccttttccatgtgaa 30711796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 24 - 102
Target Start/End: Complemental strand, 33806052 - 33805974
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatg 102  Q
    ||||||||||||||||||| ||||||||||||||||||||  |||||||| ||| ||||   |||||||||||||||||    
T  33806052 aatatgttcttcacttaatttaatcattgaatccaacttttccatggtggaaaatgattggtctttcccatgtgaaatg 33805974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 24 - 85
Target Start/End: Original strand, 32499875 - 32499936
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaac 85  Q
    ||||||||||||||||||||||||||||||||||||||||| | | ||||||||| ||||||    
T  32499875 aatatgttcttcacttaatctaatcattgaatccaactttcccgttgtgggaaagaattaac 32499936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 24 - 69
Target Start/End: Complemental strand, 32499332 - 32499287
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatg 69  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  32499332 aatatgttcttcacttaatctaatcattgaatccaactttcccatg 32499287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 18520940 - 18520900
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttc 64  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18520940 aatatgttcttcacttaatctaatcattgaatccaactttc 18520900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 36620740 - 36620780
Alignment:
Q  21 aataatatgttcttcacttaatctaatcattgaatccaact 61  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  36620740 aataatatgttcttcacttaatctaatcattgaatccaact 36620780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 85094 - 85135
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  85094 catggtgggaaaggattcacctttcccatgtgaaatgccacc 85135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 60 - 108
Target Start/End: Original strand, 30422782 - 30422829
Alignment:
Q  60 ctttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||||||||||| ||| |||||||||||||||||||||||||    
T  30422782 ctttctcatggtgggaaag-attcacctttcccatgtgaaatgccacca 30422829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 56 - 104
Target Start/End: Original strand, 33806602 - 33806650
Alignment:
Q  56 ccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgcc 104  Q
    |||||||||  |||||||||||||||| |||||||||||||||||||||    
T  33806602 ccaactttccaatggtgggaaaggattgacctttcccatgtgaaatgcc 33806650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 24 - 59
Target Start/End: Original strand, 46012943 - 46012978
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaa 59  Q
    ||||||||||||||||||||||||||||||||||||    
T  46012943 aatatgttcttcacttaatctaatcattgaatccaa 46012978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 53 - 99
Target Start/End: Original strand, 27856162 - 27856208
Alignment:
Q  53 aatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||  |||||||||||| |||||||||||||||||||||    
T  27856162 aatccaacttttccatggtgggaaatgattaacctttcccatgtgaa 27856208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 107
Target Start/End: Original strand, 48881068 - 48881108
Alignment:
Q  67 atggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||| |||||| ||||||||||    
T  48881068 atggtgggaaaggattaaccttttccatgtaaaatgccacc 48881108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 99
Target Start/End: Complemental strand, 84426 - 84385
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||| ||| ||||||||||||| ||||||||||||||||    
T  84426 aactttcccatagtgggaaaggattcacctttcccatgtgaa 84385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 23283887 - 23283928
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||  |||||||||||||||||| ||||    
T  23283887 catggtgggaaaggattcccctttcccatgtgaaatgtcacc 23283928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 66 - 107
Target Start/End: Original strand, 43754884 - 43754925
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||| |||||||||||  ||||||||||||||||    
T  43754884 catggtgggaaaagattaacctttttcatgtgaaatgccacc 43754925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 67 - 107
Target Start/End: Complemental strand, 19767918 - 19767878
Alignment:
Q  67 atggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||| ||||||||| ||||||| ||||    
T  19767918 atggtgggaaaggattaaactttcccatatgaaatgtcacc 19767878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 6e-33; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 33668304 - 33668221
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  33668304 aatatgttcttcacttaatttaatcattgaatccaactttcccatggtgggaaatgattaacctttcccatgtgaaatgccacc 33668221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 5523849 - 5523932
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||| |||||||  ||||||||||| |||||||||||||||||||||||||||||    
T  5523849 aatatgttcttcacttaatctaatcattgaatcaaactttccaatggtgggaaaagattaacctttcccatgtgaaatgccacc 5523932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 6032241 - 6032166
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  6032241 aatatgttcttcacttaatctaatcattgaatccaactttcccatagtgggaaaggattaacctttcccatgtgaa 6032166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 30611348 - 30611431
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||||||    
T  30611348 aatatgttcttcagttaatctaatcattgaatccaactttcccatggtgggaaaggattaacatttctcatgtgaaatgccacc 30611431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 24 - 106
Target Start/End: Original strand, 12809705 - 12809787
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccac 106  Q
    ||||||||||||||||||||||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||||||||    
T  12809705 aatatgttcttcacttaatctaatcattgaatccaactttcccaccatgggaaaggattaacctttcccatgtgaaatgccac 12809787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 24 - 108
Target Start/End: Original strand, 13936643 - 13936727
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    ||||||||||| |||||||||||||||||| || ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  13936643 aatatgttctttacttaatctaatcattgactctaactttcccatggtgggaaaggattaacctttcccatgtgaaatggcacca 13936727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 5523283 - 5523208
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||||||||||||||    
T  5523283 aatatgttcttcacttaatctaatcattgaatccaactttcctatggtggaaaaggattaacctttcccatgtgaa 5523208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 24 - 113
Target Start/End: Original strand, 6032756 - 6032845
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccaccaaatat 113  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||| ||||  |||||||||| |||| |||||||||||| |||||    
T  6032756 aatatgttcttcacttaatctaatcattgaatctaactttctcatggtgagaaaaaattaaccttttccatatgaaatgccacctaatat 6032845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 12809152 - 12809077
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||||||||||||||||||| |||||||||||  || ||||||||||||||||||||||||||||||    
T  12809152 aatatgttcttcacttaatctaatcattgcatccaactttcctatagtgggaaaggattaacctttcccatgtgaa 12809077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 31723916 - 31723833
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    |||||||||||||||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||||| | ||||||||||    
T  31723916 aatatgttcttcacttaatctaatcattaaatccaaatttcccatggtaggaaaggattaacctttcccatataaaatgccacc 31723833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 24 - 95
Target Start/End: Complemental strand, 30610794 - 30610723
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatg 95  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||| ||| |||||||||||||||||    
T  30610794 aatatgttcttcacttaatctaatcattgaatccaattttcccatggtggaaaatgattaacctttcccatg 30610723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 13944373 - 13944298
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||||||||||| |||||||||||||||||| |||||||| |||| ||||||| |||||| ||||||||| ||||    
T  13944373 aatatgttcttcatttaatctaatcattgaattcaactttcccatgatgggaaatgattaatctttcccatatgaa 13944298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 24 - 99
Target Start/End: Original strand, 33668833 - 33668908
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    ||||| ||||||||||||||||||||||||||||||||||   ||||||||||| ||||||| ||||| |||||||    
T  33668833 aatatattcttcacttaatctaatcattgaatccaacttttctatggtgggaaatgattaacatttccaatgtgaa 33668908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 24 - 103
Target Start/End: Original strand, 33648166 - 33648245
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgc 103  Q
    ||||| |||||||||||||  ||||||||||||||| ||||  |||||| ||||| ||| ||||||||||||||||||||    
T  33648166 aatatattcttcacttaattcaatcattgaatccaattttcctatggtgtgaaagaattgacctttcccatgtgaaatgc 33648245  T

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Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 65 - 107
Target Start/End: Complemental strand, 32079061 - 32079019
Alignment:
Q  65 tcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||| |||||||| ||||||||||||||||||||||||    
T  32079061 tcatggtggaaaaggattcacctttcccatgtgaaatgccacc 32079019  T

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Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 66 - 113
Target Start/End: Original strand, 32079798 - 32079845
Alignment:
Q  66 catggtgggaaaggattaacctttcccatgtgaaatgccaccaaatat 113  Q
    |||||||||||||  |||  ||||||||||||||||||||||||||||    
T  32079798 catggtgggaaagttttagactttcccatgtgaaatgccaccaaatat 32079845  T

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Target: scaffold0007 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 107
Target Start/End: Complemental strand, 11348 - 11266
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||||||||||||||    
T  11348 aatatgttcttcacttaatctaatcattgaatccaactttcccatggt-ggaaaagattaacctttcccatgtgaaatgccacc 11266  T

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Target: scaffold0368 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 24 - 107
Target Start/End: Original strand, 11787 - 11870
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacc 107  Q
    ||||||||||||||||||||| |||||||| || ||||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  11787 aatatgttcttcacttaatctgatcattgactctaactttcccatggtgggaaaggattaacctttaccatgtgaaatggcacc 11870  T

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Target: scaffold1095 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold1095
Description:

Target: scaffold1095; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 24 - 99
Target Start/End: Complemental strand, 1568 - 1493
Alignment:
Q  24 aatatgttcttcacttaatctaatcattgaatccaactttctcatggtgggaaaggattaacctttcccatgtgaa 99  Q
    |||||||| |||||||||||||||||||||||||||||||  ||||||| |||| |||||| ||||||||||||||    
T  1568 aatatgttattcacttaatctaatcattgaatccaacttttccatggtgcgaaatgattaagctttcccatgtgaa 1493  T

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Target: scaffold0039 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 108
Target Start/End: Complemental strand, 90664 - 90614
Alignment:
Q  58 aactttctcatggtgggaaaggattaacctttcccatgtgaaatgccacca 108  Q
    |||||||  ||||||| ||| |||| |||||||||||||||||||||||||    
T  90664 aactttcctatggtggaaaatgattcacctttcccatgtgaaatgccacca 90614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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