View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6741_high_13 (Length: 243)
Name: NF6741_high_13
Description: NF6741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6741_high_13 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 183; Significance: 4e-99; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 16 - 243
Target Start/End: Original strand, 35721671 - 35721898
Alignment:
| Q |
16 |
atcactgacgtttccgttgacttcataattgtattgtatttattttatttgttatgaaagaaaaagaaaattgacgtttccgttgacttcgtaatcgtat |
115 |
Q |
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| T |
35721671 |
atcactgacgtttccgttgacttcgtaattgtattgtatttattttatctgttatgaaagaaaaagaaaattgacgtttccgttgacttcgtaatcgtat |
35721770 |
T |
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| Q |
116 |
tgtaattattttatttgttatgaagtaataagnnnnnnngtttggggcaaatttattttaaaagttatgctcgtaactggatttaaatgattgatttatt |
215 |
Q |
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| T |
35721771 |
tgtaattattttatttgttatgaaagaataagaaaaaaagtttggggtaaatttattttaaaagttatgctcgtaaatggatttaaatgattgatttatt |
35721870 |
T |
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| Q |
216 |
atatcctaacttaggggtcaatgcttac |
243 |
Q |
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| T |
35721871 |
atatcctaacttaggggtcaatgcttac |
35721898 |
T |
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