View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6741_high_7 (Length: 327)
Name: NF6741_high_7
Description: NF6741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6741_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 300; Significance: 1e-169; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 1021782 - 1022093
Alignment:
| Q |
1 |
ccgaatcacaaactggaaaatccagaatccgatacatcatcagaatcgttctacaacatgttccactcgaaaattcatcttcagaatcacaagactgaaa |
100 |
Q |
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| T |
1021782 |
ccgaatcacaaactggaaaatccagaatccgatacatcatcagaatcgttctacaacatgttccactcgaaaattcatcttcagaatcacaagactgaaa |
1021881 |
T |
|
| Q |
101 |
cggaacaagaactagatcgtttggaaacggaacgtgaggaggttcggtgtagtgattgggaggattgttatggttcaacaagctcatcagatagagatga |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
1021882 |
cggaacaagaactagatcgtttggaaacggaacgtgaggaggttcggtgtagtgattgggaggattgttatcgttcaacaagctcatcagatagagatga |
1021981 |
T |
|
| Q |
201 |
agttatcgccggtttgaagtcatcggaaaaatcaccggagtttgttgccggcgttgaggatcctgtgagaaaagacgaggaggtgaatgtggaaaaggtg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
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| T |
1021982 |
agttatcgccggtttgaagtcatcggaaaaatcaccggagtttgttgccggcgttgaggttccggtgagaaaagacgaggaggtgaatgtggaaaaggtg |
1022081 |
T |
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| Q |
301 |
aagatgaagcat |
312 |
Q |
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|||||||||||| |
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| T |
1022082 |
aagatgaagcat |
1022093 |
T |
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