View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6741_low_11 (Length: 257)

Name: NF6741_low_11
Description: NF6741
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6741_low_11
NF6741_low_11
[»] scaffold0108 (1 HSPs)
scaffold0108 (16-247)||(50472-50703)
[»] chr7 (29 HSPs)
chr7 (16-247)||(12798194-12798425)
chr7 (18-247)||(19150341-19150570)
chr7 (18-247)||(20749740-20749969)
chr7 (18-247)||(14260936-14261165)
chr7 (18-247)||(11385119-11385348)
chr7 (18-175)||(15099365-15099522)
chr7 (14-235)||(16947174-16947395)
chr7 (14-247)||(12459954-12460187)
chr7 (14-247)||(13024670-13024903)
chr7 (16-192)||(14144989-14145165)
chr7 (18-250)||(13676781-13677007)
chr7 (14-208)||(14283103-14283297)
chr7 (58-247)||(13004835-13005024)
chr7 (14-250)||(26115277-26115513)
chr7 (22-251)||(13965354-13965583)
chr7 (14-250)||(21755738-21755974)
chr7 (89-247)||(12712353-12712511)
chr7 (51-235)||(15627886-15628070)
chr7 (18-250)||(26091485-26091717)
chr7 (51-250)||(18050640-18050839)
chr7 (58-247)||(14043064-14043253)
chr7 (58-247)||(14353094-14353283)
chr7 (18-250)||(40924504-40924736)
chr7 (18-250)||(49155631-49155863)
chr7 (18-240)||(12203497-12203719)
chr7 (89-187)||(15157832-15157930)
chr7 (92-187)||(13689441-13689536)
chr7 (150-190)||(16726210-16726250)
chr7 (150-190)||(17703224-17703264)
[»] chr4 (25 HSPs)
chr4 (16-229)||(14993088-14993301)
chr4 (18-250)||(15267116-15267348)
chr4 (18-247)||(18259781-18260010)
chr4 (16-240)||(15073697-15073921)
chr4 (18-250)||(16150976-16151208)
chr4 (18-250)||(16155122-16155354)
chr4 (14-244)||(20893367-20893597)
chr4 (15-250)||(11203932-11204167)
chr4 (14-250)||(7357603-7357839)
chr4 (18-240)||(8709017-8709239)
chr4 (14-211)||(13879445-13879642)
chr4 (18-250)||(44658566-44658798)
chr4 (18-250)||(3261494-3261726)
chr4 (18-250)||(29450237-29450469)
chr4 (51-250)||(51603492-51603691)
chr4 (51-250)||(53750170-53750369)
chr4 (18-176)||(14697441-14697599)
chr4 (150-247)||(14162942-14163039)
chr4 (144-229)||(27903851-27903936)
chr4 (89-187)||(14300485-14300583)
chr4 (58-212)||(8416-8570)
chr4 (150-207)||(18604302-18604359)
chr4 (152-212)||(15514-15574)
chr4 (93-193)||(19635548-19635648)
chr4 (14-94)||(27903721-27903801)
[»] chr3 (41 HSPs)
chr3 (16-247)||(16825210-16825441)
chr3 (18-247)||(14290463-14290692)
chr3 (18-250)||(12181313-12181545)
chr3 (18-247)||(17494615-17494848)
chr3 (28-247)||(35983160-35983379)
chr3 (16-245)||(17189341-17189570)
chr3 (16-247)||(24190271-24190501)
chr3 (16-240)||(12857434-12857658)
chr3 (18-250)||(12357455-12357687)
chr3 (14-250)||(31692113-31692349)
chr3 (14-250)||(31941868-31942104)
chr3 (16-250)||(16831456-16831690)
chr3 (16-208)||(16384342-16384534)
chr3 (32-250)||(18131275-18131493)
chr3 (15-247)||(11958112-11958344)
chr3 (15-244)||(16326641-16326872)
chr3 (14-247)||(12508496-12508729)
chr3 (138-240)||(2245610-2245712)
chr3 (14-250)||(10408933-10409169)
chr3 (18-235)||(15230572-15230789)
chr3 (18-235)||(15236440-15236657)
chr3 (18-250)||(28757288-28757520)
chr3 (18-250)||(47126913-47127145)
chr3 (51-190)||(13945026-13945165)
chr3 (51-250)||(8744318-8744517)
chr3 (32-247)||(12843045-12843260)
chr3 (144-247)||(13317500-13317603)
chr3 (52-235)||(15262623-15262806)
chr3 (18-78)||(15008684-15008744)
chr3 (152-247)||(14578363-14578458)
chr3 (72-187)||(15713061-15713176)
chr3 (18-76)||(2037014-2037072)
chr3 (18-76)||(2040755-2040813)
chr3 (73-187)||(3688954-3689068)
chr3 (84-190)||(6603757-6603863)
chr3 (89-187)||(10008627-10008725)
chr3 (89-187)||(10909237-10909335)
chr3 (18-76)||(14039715-14039773)
chr3 (152-194)||(23079012-23079054)
chr3 (144-229)||(10416994-10417079)
chr3 (152-201)||(15459410-15459459)
[»] scaffold0490 (1 HSPs)
scaffold0490 (18-247)||(3234-3463)
[»] scaffold0434 (1 HSPs)
scaffold0434 (14-247)||(5608-5841)
[»] chr2 (12 HSPs)
chr2 (18-247)||(23274564-23274793)
chr2 (14-247)||(19716260-19716493)
chr2 (14-247)||(19720823-19721056)
chr2 (18-247)||(23097261-23097490)
chr2 (18-240)||(28350846-28351068)
chr2 (51-211)||(12577357-12577517)
chr2 (18-240)||(21901508-21901730)
chr2 (73-250)||(20848612-20848789)
chr2 (150-247)||(22742209-22742306)
chr2 (151-236)||(24817094-24817179)
chr2 (89-187)||(10871889-10871987)
chr2 (89-187)||(24265409-24265507)
[»] scaffold0053 (2 HSPs)
scaffold0053 (19-247)||(62478-62706)
scaffold0053 (61-247)||(65028-65214)
[»] chr5 (31 HSPs)
chr5 (27-247)||(21870163-21870383)
chr5 (27-247)||(21874443-21874663)
chr5 (18-250)||(23563050-23563282)
chr5 (16-247)||(23077790-23078021)
chr5 (51-250)||(17266216-17266415)
chr5 (18-235)||(21983074-21983291)
chr5 (14-250)||(20345532-20345768)
chr5 (14-250)||(22505929-22506165)
chr5 (14-250)||(14883873-14884109)
chr5 (19-223)||(23669887-23670091)
chr5 (49-247)||(23474497-23474695)
chr5 (34-250)||(25851342-25851558)
chr5 (37-240)||(43122740-43122943)
chr5 (18-240)||(21560917-21561139)
chr5 (89-247)||(21331874-21332032)
chr5 (144-250)||(22465330-22465436)
chr5 (89-187)||(22329835-22329933)
chr5 (144-229)||(20770518-20770603)
chr5 (144-229)||(20779293-20779378)
chr5 (140-229)||(28891845-28891934)
chr5 (152-211)||(25429826-25429885)
chr5 (89-187)||(14996687-14996785)
chr5 (18-76)||(16258092-16258150)
chr5 (93-187)||(19773304-19773398)
chr5 (18-76)||(22591811-22591869)
chr5 (18-76)||(22595366-22595424)
chr5 (89-187)||(27682348-27682446)
chr5 (150-235)||(21631296-21631381)
chr5 (89-178)||(27613696-27613785)
chr5 (144-244)||(20824833-20824933)
chr5 (152-212)||(26735648-26735708)
[»] scaffold0751 (1 HSPs)
scaffold0751 (16-247)||(5548-5778)
[»] chr8 (22 HSPs)
chr8 (16-247)||(21928832-21929063)
chr8 (16-247)||(19985584-19985815)
chr8 (14-250)||(22027423-22027659)
chr8 (16-223)||(22374273-22374480)
chr8 (16-247)||(31413678-31413909)
chr8 (16-192)||(22054267-22054443)
chr8 (16-250)||(29300569-29300803)
chr8 (14-250)||(16268367-16268603)
chr8 (14-250)||(28984313-28984549)
chr8 (18-240)||(20391492-20391714)
chr8 (151-250)||(21970694-21970793)
chr8 (151-249)||(22004225-22004323)
chr8 (32-235)||(22523930-22524133)
chr8 (18-211)||(6606651-6606844)
chr8 (58-247)||(22421039-22421228)
chr8 (71-247)||(21671974-21672150)
chr8 (89-235)||(22990522-22990668)
chr8 (93-190)||(18860055-18860152)
chr8 (151-249)||(21982098-21982196)
chr8 (151-249)||(21998584-21998682)
chr8 (93-187)||(22126168-22126262)
chr8 (153-214)||(3274646-3274707)
[»] scaffold0067 (4 HSPs)
scaffold0067 (18-247)||(29993-30222)
scaffold0067 (14-250)||(48883-49119)
scaffold0067 (14-250)||(57917-58153)
scaffold0067 (14-250)||(64305-64541)
[»] scaffold0017 (1 HSPs)
scaffold0017 (18-247)||(4160-4388)
[»] scaffold1433 (1 HSPs)
scaffold1433 (27-247)||(1017-1237)
[»] scaffold0404 (1 HSPs)
scaffold0404 (27-247)||(8122-8342)
[»] scaffold0031 (1 HSPs)
scaffold0031 (16-247)||(115991-116222)
[»] scaffold0046 (2 HSPs)
scaffold0046 (18-247)||(70477-70706)
scaffold0046 (153-247)||(433-527)
[»] scaffold0102 (1 HSPs)
scaffold0102 (27-247)||(43076-43296)
[»] scaffold0335 (1 HSPs)
scaffold0335 (18-247)||(4010-4239)
[»] scaffold0266 (1 HSPs)
scaffold0266 (16-247)||(17004-17235)
[»] chr1 (24 HSPs)
chr1 (18-247)||(22015520-22015749)
chr1 (18-247)||(21738811-21739040)
chr1 (18-250)||(19857660-19857892)
chr1 (18-247)||(21742327-21742556)
chr1 (18-250)||(20832673-20832904)
chr1 (16-247)||(24096390-24096621)
chr1 (15-250)||(31536769-31537004)
chr1 (14-236)||(21961409-21961631)
chr1 (18-250)||(38909598-38909830)
chr1 (14-250)||(52989123-52989358)
chr1 (51-244)||(16379482-16379675)
chr1 (14-211)||(18273149-18273346)
chr1 (14-211)||(20297765-20297962)
chr1 (18-250)||(48426259-48426491)
chr1 (14-250)||(20074481-20074717)
chr1 (144-250)||(20853532-20853638)
chr1 (18-250)||(37680435-37680667)
chr1 (153-247)||(20921929-20922023)
chr1 (58-235)||(21044941-21045118)
chr1 (73-187)||(16347433-16347547)
chr1 (73-187)||(16354081-16354195)
chr1 (89-187)||(51330330-51330428)
chr1 (89-133)||(19109793-19109837)
chr1 (51-247)||(22117102-22117298)
[»] scaffold0106 (1 HSPs)
scaffold0106 (16-247)||(34704-34935)
[»] scaffold0054 (1 HSPs)
scaffold0054 (16-247)||(63245-63456)
[»] scaffold0156 (1 HSPs)
scaffold0156 (18-250)||(37308-37540)
[»] scaffold0011 (1 HSPs)
scaffold0011 (18-250)||(153861-154093)
[»] chr6 (28 HSPs)
chr6 (15-250)||(18797891-18798126)
chr6 (16-240)||(25771046-25771270)
chr6 (14-250)||(19438202-19438438)
chr6 (18-247)||(21566839-21567068)
chr6 (18-250)||(14376761-14376993)
chr6 (18-247)||(19456227-19456456)
chr6 (18-247)||(19466372-19466601)
chr6 (16-240)||(21474802-21475010)
chr6 (15-172)||(24515337-24515494)
chr6 (18-240)||(19486149-19486371)
chr6 (14-247)||(10465696-10465929)
chr6 (89-250)||(34642430-34642591)
chr6 (18-247)||(16813844-16814073)
chr6 (89-247)||(19881671-19881829)
chr6 (18-247)||(8720553-8720782)
chr6 (140-250)||(15462662-15462772)
chr6 (14-247)||(18660119-18660352)
chr6 (144-250)||(20010346-20010452)
chr6 (34-250)||(24367620-24367836)
chr6 (89-187)||(5836139-5836237)
chr6 (138-247)||(30677872-30677981)
chr6 (15-247)||(23081624-23081856)
chr6 (18-212)||(25958636-25958830)
chr6 (151-240)||(23084680-23084769)
chr6 (89-187)||(2871713-2871811)
chr6 (152-194)||(22437207-22437249)
chr6 (89-133)||(22829351-22829395)
chr6 (186-250)||(24515269-24515333)
[»] scaffold0523 (2 HSPs)
scaffold0523 (27-247)||(5818-6035)
scaffold0523 (36-212)||(11484-11660)
[»] scaffold0151 (1 HSPs)
scaffold0151 (16-250)||(245-479)
[»] scaffold0035 (1 HSPs)
scaffold0035 (18-250)||(6174-6405)
[»] scaffold0020 (2 HSPs)
scaffold0020 (14-250)||(98286-98522)
scaffold0020 (16-240)||(176354-176578)
[»] scaffold0104 (1 HSPs)
scaffold0104 (16-247)||(43125-43356)
[»] scaffold0261 (2 HSPs)
scaffold0261 (37-247)||(12120-12330)
scaffold0261 (37-247)||(20300-20510)
[»] scaffold2062 (1 HSPs)
scaffold2062 (18-250)||(575-807)
[»] scaffold1032 (1 HSPs)
scaffold1032 (30-250)||(518-738)
[»] scaffold0056 (1 HSPs)
scaffold0056 (18-250)||(586-818)
[»] scaffold0026 (1 HSPs)
scaffold0026 (27-247)||(52029-52249)
[»] scaffold1056 (1 HSPs)
scaffold1056 (18-247)||(2089-2317)
[»] scaffold0222 (2 HSPs)
scaffold0222 (14-247)||(193-426)
scaffold0222 (18-235)||(21183-21400)
[»] scaffold1530 (1 HSPs)
scaffold1530 (18-250)||(873-1105)
[»] scaffold0235 (2 HSPs)
scaffold0235 (15-250)||(8165-8400)
scaffold0235 (15-250)||(18379-18614)
[»] scaffold0004 (2 HSPs)
scaffold0004 (18-250)||(319612-319844)
scaffold0004 (18-94)||(326076-326151)
[»] scaffold0664 (2 HSPs)
scaffold0664 (14-229)||(7403-7618)
scaffold0664 (195-250)||(3-58)
[»] scaffold0192 (1 HSPs)
scaffold0192 (31-208)||(29909-30086)
[»] scaffold1299 (1 HSPs)
scaffold1299 (35-246)||(1555-1766)
[»] scaffold1517 (1 HSPs)
scaffold1517 (14-247)||(1193-1426)
[»] scaffold0476 (1 HSPs)
scaffold0476 (18-247)||(251-480)
[»] scaffold0167 (1 HSPs)
scaffold0167 (18-250)||(5422-5654)
[»] scaffold0034 (4 HSPs)
scaffold0034 (14-250)||(11609-11845)
scaffold0034 (18-250)||(1655-1887)
scaffold0034 (144-235)||(70867-70958)
scaffold0034 (14-94)||(70737-70817)
[»] scaffold0074 (1 HSPs)
scaffold0074 (27-250)||(15450-15673)
[»] scaffold0010 (3 HSPs)
scaffold0010 (18-250)||(39038-39268)
scaffold0010 (51-247)||(5317-5513)
scaffold0010 (144-229)||(180563-180648)
[»] scaffold0865 (1 HSPs)
scaffold0865 (16-235)||(990-1209)
[»] scaffold0133 (1 HSPs)
scaffold0133 (16-235)||(28003-28222)
[»] scaffold0585 (1 HSPs)
scaffold0585 (38-240)||(574-775)
[»] scaffold0146 (1 HSPs)
scaffold0146 (18-166)||(71-219)
[»] scaffold0072 (1 HSPs)
scaffold0072 (14-250)||(54412-54648)
[»] scaffold0005 (1 HSPs)
scaffold0005 (16-208)||(263593-263785)
[»] scaffold0003 (2 HSPs)
scaffold0003 (32-208)||(203764-203940)
scaffold0003 (89-181)||(424748-424840)
[»] scaffold0188 (1 HSPs)
scaffold0188 (16-247)||(33078-33309)
[»] scaffold0765 (1 HSPs)
scaffold0765 (32-208)||(6002-6178)
[»] scaffold0348 (2 HSPs)
scaffold0348 (15-250)||(17187-17422)
scaffold0348 (27-181)||(4621-4775)
[»] scaffold0239 (1 HSPs)
scaffold0239 (16-202)||(9538-9724)
[»] scaffold0405 (1 HSPs)
scaffold0405 (31-247)||(5984-6200)
[»] scaffold0114 (1 HSPs)
scaffold0114 (27-202)||(40436-40611)
[»] scaffold0317 (1 HSPs)
scaffold0317 (18-250)||(3000-3226)
[»] scaffold1845 (1 HSPs)
scaffold1845 (14-250)||(1007-1243)
[»] scaffold1426 (1 HSPs)
scaffold1426 (14-250)||(1310-1546)
[»] scaffold0518 (1 HSPs)
scaffold0518 (14-181)||(2196-2363)
[»] scaffold0420 (1 HSPs)
scaffold0420 (15-250)||(8980-9215)
[»] scaffold0243 (2 HSPs)
scaffold0243 (18-250)||(9477-9707)
scaffold0243 (156-212)||(23686-23742)
[»] scaffold0023 (1 HSPs)
scaffold0023 (14-247)||(164107-164340)
[»] scaffold0058 (1 HSPs)
scaffold0058 (14-250)||(22487-22723)
[»] scaffold0001 (2 HSPs)
scaffold0001 (14-238)||(514068-514292)
scaffold0001 (151-235)||(442154-442238)
[»] scaffold0310 (1 HSPs)
scaffold0310 (14-236)||(11342-11564)
[»] scaffold0203 (1 HSPs)
scaffold0203 (84-250)||(3754-3920)
[»] scaffold0367 (1 HSPs)
scaffold0367 (18-250)||(8724-8956)
[»] scaffold0076 (1 HSPs)
scaffold0076 (34-250)||(53126-53342)
[»] scaffold0679 (1 HSPs)
scaffold0679 (138-240)||(748-850)
[»] scaffold0098 (1 HSPs)
scaffold0098 (138-240)||(25949-26051)
[»] scaffold0706 (1 HSPs)
scaffold0706 (18-250)||(4912-5144)
[»] scaffold0118 (1 HSPs)
scaffold0118 (14-250)||(826-1062)
[»] scaffold0100 (1 HSPs)
scaffold0100 (51-211)||(16351-16511)
[»] scaffold0609 (2 HSPs)
scaffold0609 (14-211)||(7922-8119)
scaffold0609 (14-78)||(1304-1368)
[»] scaffold0068 (1 HSPs)
scaffold0068 (15-244)||(66817-67046)
[»] scaffold0586 (1 HSPs)
scaffold0586 (150-250)||(67-167)
[»] scaffold0077 (1 HSPs)
scaffold0077 (51-247)||(57320-57516)
[»] scaffold0190 (1 HSPs)
scaffold0190 (15-202)||(30077-30264)
[»] scaffold0009 (1 HSPs)
scaffold0009 (34-247)||(252004-252217)
[»] scaffold1914 (1 HSPs)
scaffold1914 (51-187)||(996-1132)
[»] scaffold0180 (1 HSPs)
scaffold0180 (138-240)||(30741-30843)
[»] scaffold0429 (1 HSPs)
scaffold0429 (14-247)||(1128-1361)
[»] scaffold0270 (2 HSPs)
scaffold0270 (18-247)||(7242-7471)
scaffold0270 (18-247)||(14372-14601)
[»] scaffold0088 (1 HSPs)
scaffold0088 (73-250)||(30334-30511)
[»] scaffold2165 (1 HSPs)
scaffold2165 (14-238)||(518-742)
[»] scaffold0276 (1 HSPs)
scaffold0276 (18-250)||(23626-23858)
[»] scaffold0708 (1 HSPs)
scaffold0708 (15-100)||(4998-5083)
[»] scaffold1274 (1 HSPs)
scaffold1274 (51-247)||(20-215)
[»] scaffold0041 (1 HSPs)
scaffold0041 (18-250)||(42104-42336)
[»] scaffold0113 (1 HSPs)
scaffold0113 (113-244)||(17703-17834)
[»] scaffold0507 (1 HSPs)
scaffold0507 (89-247)||(11468-11626)
[»] scaffold0012 (1 HSPs)
scaffold0012 (62-247)||(216126-216311)
[»] scaffold0006 (1 HSPs)
scaffold0006 (58-247)||(104635-104824)
[»] scaffold0282 (2 HSPs)
scaffold0282 (153-247)||(9828-9922)
scaffold0282 (51-214)||(13213-13376)
[»] scaffold0165 (1 HSPs)
scaffold0165 (27-105)||(12322-12400)
[»] scaffold0529 (1 HSPs)
scaffold0529 (150-247)||(5589-5686)
[»] scaffold0457 (1 HSPs)
scaffold0457 (73-250)||(13757-13934)
[»] scaffold1600 (1 HSPs)
scaffold1600 (51-247)||(468-664)
[»] scaffold0040 (1 HSPs)
scaffold0040 (151-247)||(18347-18443)
[»] scaffold0605 (1 HSPs)
scaffold0605 (144-205)||(1775-1836)
[»] scaffold0505 (1 HSPs)
scaffold0505 (150-211)||(2252-2313)
[»] scaffold0293 (1 HSPs)
scaffold0293 (150-235)||(15911-15996)
[»] scaffold0029 (1 HSPs)
scaffold0029 (144-229)||(93618-93703)
[»] scaffold0018 (2 HSPs)
scaffold0018 (151-236)||(9068-9153)
scaffold0018 (151-247)||(23004-23100)
[»] scaffold0130 (2 HSPs)
scaffold0130 (37-109)||(3736-3808)
scaffold0130 (150-190)||(7542-7582)
[»] scaffold0947 (1 HSPs)
scaffold0947 (195-250)||(1252-1307)
[»] scaffold0395 (1 HSPs)
scaffold0395 (170-244)||(16232-16306)
[»] scaffold0324 (1 HSPs)
scaffold0324 (113-235)||(2453-2575)
[»] scaffold0273 (1 HSPs)
scaffold0273 (150-208)||(541-599)
[»] scaffold0075 (2 HSPs)
scaffold0075 (58-212)||(48139-48293)
scaffold0075 (152-212)||(55212-55272)
[»] scaffold1423 (1 HSPs)
scaffold1423 (152-201)||(130-179)
[»] scaffold0071 (1 HSPs)
scaffold0071 (152-201)||(2732-2781)
[»] scaffold0042 (1 HSPs)
scaffold0042 (150-247)||(26853-26950)
[»] scaffold0403 (1 HSPs)
scaffold0403 (89-201)||(15351-15463)
[»] scaffold0342 (1 HSPs)
scaffold0342 (51-247)||(13971-14167)
[»] scaffold0044 (1 HSPs)
scaffold0044 (93-181)||(3865-3953)


Alignment Details
Target: scaffold0108 (Bit Score: 172; Significance: 2e-92; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 50472 - 50703
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |||||||| |||| |||||||||||||||||||||   ||     
T  50472 aacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattccatctatgcttacccttgtcagcaggggcactatacggcttcggacc 50571  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||| ||||||||||||    
T  50572 actctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcttcttcatagatcctacagctgcttaccaactcagaaaagttt 50671  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||||||||||||||||||||||    
T  50672 cttatcttctgataaccaatagccctcttgat 50703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 172; Significance: 2e-92; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 12798425 - 12798194
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||||| |||| |||||| ||||||||||||||   |||    
T  12798425 aacaaacaatatcagtatgagcatctctcctcttgagcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatacggcttcggacg 12798326  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| |||||||||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  12798325 actctgctgtcccttgcctctgcgctcactcatcaccttgtaaagagctttcgtatcctcttcataaatcctacagctgcttaccaactcagaaaagttt 12798226  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||||||||||||||||||||||    
T  12798225 cttatcttctgataaccaatagccctcttgat 12798194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 19150341 - 19150570
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||| ||||||||||||| |||||||   |||||    
T  19150341 caaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcggacgac 19150440  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||| || || || |||||||| |||||||||||    
T  19150441 tctgctgtcccttacctatgcgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctactcaccaattcggaaaagtttct 19150540  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    |||||| ||||||||||||||||| |||||    
T  19150541 tatcttttgataaccaatagcccttttgat 19150570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 20749740 - 20749969
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||||||| ||||||||||| |||| ||||||||||||| |||||||   |||||    
T  20749740 caaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggggcactaaacggcttcggacgac 20749839  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||| ||||| || || || |||||||| |||||||||||    
T  20749840 tctgctgtcccttacctatgcgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctactcaccaattcggaaaagtttct 20749939  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    |||||| ||||||||||||||||| |||||    
T  20749940 tatcttttgataaccaatagcccttttgat 20749969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 14261165 - 14260936
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||| ||| ||||||||||||| ||||| ||| |||||| |||||||||||| ||||| |||||| |||| |||||||||||||||||||||   |||||    
T  14261165 caaataatctcagtaggagcatatctccccttaggcctcctctcatcattcagtctctacttacccttgtcagcaggggcactatacggcttcggacgac 14261066  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||  |||||||| ||| | |||||||| |||||||||||||||||||| |||||||||||||| ||||| || || || ||||| ||||| || || ||    
T  14261065 tctactgtcccttacctttgcgctcactgatcaccttgtaatgagctttcgtatcctcttcatatatcctgcagctactcaccaactcagagaaattcct 14260966  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    |||||| ||||| |||||||||||||||||    
T  14260965 tatcttttgatagccaatagccctcttgat 14260936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 11385348 - 11385119
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||| || |||| ||||||||||||||||||||||||  |||||||||||| ||  ||||| || |||| |||||||||||| ||||||||   | |||    
T  11385348 caaactatctcagcaggagcatctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggatgac 11385249  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || ||||||||||||| ||||||||||||||||| ||| || ||||| || || || ||||||||||| ||||||||  ||||    
T  11385248 tctgttgtcccttacccctccgctcactcatcatcttgtaatgagcttttgaatcttcctcatagattctgcagctgcttaccaactcagaaaaagttct 11385149  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
     ||||||||||| ||||| |||||||||||    
T  11385148 gatcttctgatagccaatggccctcttgat 11385119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 18 - 175
Target Start/End: Complemental strand, 15099522 - 15099365
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||| || |||||||||||||||||||||||||||||| || ||||||| || ||||||||||| |||| |||||| |||||||||||| |   |||||    
T  15099522 caaactatgtcagtaggagcatctctcctcttgggcctcctcccatcatttaacctctgcttacccttgtcagcaggagcactatacggcgtcggacgac 15099423  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctc 175  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  15099422 tctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtgtcctc 15099365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 14 - 235
Target Start/End: Complemental strand, 16947395 - 16947174
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||   |||||||||||||||||||||||  |||||||||||| ||||||||| || |||| |||||||||||| || || ||   |    
T  16947395 gtaacaaacaatttcaactggagcatctctcctcttgggccttctctcatcattcattctctgctttcccttgtcagcaggggcactgtatggtttagga 16947296  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| || || | ||||||||||||||||||||||||||| |||||||||||||| || || || || || ||||||||||| ||      
T  16947295 cgactctgctgtcccttaccccttctctcactcatcaccttgtaatgagctttcgtatcctcttcatagattctgcagctactcaccaattcagagaaaa 16947196  T
Q  214 ttcttatcttctgataaccaat 235  Q
    |||| ||||||||||| |||||    
T  16947195 ttctaatcttctgatacccaat 16947174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 12459954 - 12460187
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||| ||||| |||| |||| |||||||||||||||||||| | |||||||||| | ||||||| || |||| |||| | ||| | || |||||   |    
T  12459954 gtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttagga 12460053  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| || || | |||||||||||||||||||||||||||||| || || ||||| ||||| || ||||| ||||| ||||| ||      
T  12460054 cgactctgctgtcccttacccctcctctcactcatcaccttgtaatgagcttttgtgtcttcctcatatatcctgcagctgctcaccaactcagagaaaa 12460153  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
     ||| ||||||||||| || ||||||||||||||    
T  12460154 ctctaatcttctgataccctatagccctcttgat 12460187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 13024670 - 13024903
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| ||||||||||||||||||||||||| | ||||||||||  |||||||| || |||| |||||| ||||| || || ||   |    
T  13024670 gtaacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcagcaggagcactgtaaggtttagga 13024769  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||  |||||||| || || | ||||||||||||||||||||||||||| || || || ||||| ||||| || ||||||||||| ||||| ||      
T  13024770 cgattctactgtcccttacccctcctctcactcatcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaactcagagaaaa 13024869  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
     ||| ||||||||||| |||||||| || |||||    
T  13024870 ctctaatcttctgatacccaatagctcttttgat 13024903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 14144989 - 14145165
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||| || |||| ||||||||||||||| |  |||||| |||||||||| | |||||||||||| |||| |||||||||||| ||||||||   |||    
T  14144989 aacaaactatctcagcaggagcatctctcctatatggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtacggcttaggacg 14145088  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaac 192  Q
    |||||| |||||||| ||||| ||||||||||||||||| ||||||||||| ||  |||| ||||| ||||| ||||    
T  14145089 actctgctgtcccttacctcttcgctcactcatcaccttataatgagctttggtgccctcctcatagatcctgcaac 14145165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 13676781 - 13677007
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| ||||||||||||| ||||| || || |||| |||||| ||||||||||| ||   | |||    
T  13676781 caaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcactatacggtttaggatgac 13676880  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| ||||  || |||||      || ||||||||||||||||||||| ||||| |||||||| ||||| || || || ||||| ||||| ||  ||||    
T  13676881 tctgctgtcatttacctct------acacatcaccttgtaatgagctttagtatcttcttcatatatcctgcagctactcaccaaatcagagaaaattct 13676974  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    |||||||||||| ||||| || |||||||||||    
T  13676975 tatcttctgatacccaatggctctcttgatgtc 13677007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 14 - 208
Target Start/End: Complemental strand, 14283297 - 14283103
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||  |||| |||||||||||||||   ||||||| |||||||||| | |||||||||||| || | |||||||||||||||||||||        
T  14283297 gtaacaaacaacctcagcaggagcatctctcctaacgggcctcctctcatcattgagtctctgcttacccttatcagcaggggcactatacggcttcggg 14283198  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcaga 208  Q
    |||||||| ||||||||    || | ||||||||||||||||||||||||||| || ||||| ||||| ||||| ||||  |||||||| |||||    
T  14283197 cgactctgctgtcccttattccttctctcactcatcaccttgtaatgagctttagtgtcctcctcatagatcctgcaacgacttaccaaatcaga 14283103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 13004835 - 13005024
Alignment:
Q  58 tctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 157  Q
    |||||||||||| ||  ||||| || |||  ||||||||| || ||||||||   ||||||||||||||||||||| || || |||||||||||||||||    
T  13004835 tctcatcattcagtcgttgctttcccttgccagcaggggcgctgtacggcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttgta 13004934  T
Q  158 atgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||| |||| ||| |||||||| || || || || |||| ||| |||||||   | || ||||||||||||||||| |||||||||||    
T  13004935 atgagcctttgaatcttcttcatagattctgcagctacttatcaactcagaaagaatcctgatcttctgataaccaatggccctcttgat 13005024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 26115513 - 26115277
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| ||||  |||||||||||||||||||||||| | |||||| |||   ||||||| || |||| |||||| ||||| || |||||   |    
T  26115513 gtaacaaacaatctcagccggagcatctctcctcttgggcctcctatcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 26115414  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||||| |||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || ||||| ||| | ||||| ||||| |||     
T  26115413 cgattctgttatcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctacacctgttaaccaactcagagaaga 26115314  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| |||| |||||| ||||| || |||||||||||    
T  26115313 ctctgatctgctgatatccaatggctctcttgatgtc 26115277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 22 - 251
Target Start/End: Complemental strand, 13965583 - 13965354
Alignment:
Q  22 caatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctg 121  Q
    |||| |||| ||||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || |||||   |||| | ||    
T  13965583 caatctcagcaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattatg 13965484  T
Q  122 ttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatc 221  Q
    ||||||||| || || | ||||||||| | || |||||||||||| || || ||||||||||||| ||| ||| | ||||| |||||||||  ||| |||    
T  13965483 ttgtcccttacccctcctctcactcattatctggtaatgagctttggtgtcttcttcataaatccaacacctgttaaccaactcagaaaagactctgatc 13965384  T
Q  222 ttctgataaccaatagccctcttgatgtcc 251  Q
    | |||||| |||||||| || |||||||||    
T  13965383 tgctgatacccaatagctcttttgatgtcc 13965354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 21755738 - 21755974
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| ||||  ||||||||||||||||| |||||| | |||||| |||   ||||||| || |||| |||||| ||||| || |||||   |    
T  21755738 gtaacaaacaatctcagagggagcatctctcctcttaggcctcatgtcatcactcatattctgctttcctttgtcagcaggagcactgtaaggcttagga 21755837  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| | ||||||||||| || || | ||||||||| | |||||||||||||||  | || ||||||||||| ||||| ||| | ||||| ||||| |||     
T  21755838 cgattttgttgtcccttacccctcctctcactcattatcttgtaatgagctttgatgtcttcttcataaattctacacctgttaaccaactcagagaaga 21755937  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| |||| |||||| |||||||| || ||||||||    
T  21755938 ctctgatctgctgatacccaatagctcttttgatgtc 21755974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 12712511 - 12712353
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatccta 188  Q
    |||||| ||||| ||||||||   ||||||||||||||||||||| || || ||||||||||||||| ||||||| |||| ||| || ||||| || ||     
T  12712511 agcaggagcactgtacggcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttggaatgagcctttgaatcttcctcatagattctg 12712412  T
Q  189 caactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    || || |||| ||| ||| |||   |||| ||||||||||| ||||| |||||||||||    
T  12712411 cagctacttatcaactcataaagagttctaatcttctgatagccaatggccctcttgat 12712353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 51 - 235
Target Start/End: Original strand, 15627886 - 15628070
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||||||||||||||||  || || ||||| || | |||||| ||||| || ||||||  |||||| ||||| | ||| | | | | |||| |||| |    
T  15627886 ggcctcttctcatcattcaccctttgtttacccttatcagcaggagcactgtaaggctttggacgactttgttgactcttacttttcctctcattcataa 15627985  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 235  Q
    |||||||||||||||| |||||||| ||||| ||||  ||||| ||||||||||||||||  |||   ||||||||||| |||||    
T  15627986 ccttgtaatgagctttcgtatcctcctcatagatccggcaactacttaccaattcagaaattttttggatcttctgatatccaat 15628070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 26091717 - 26091485
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || |||||   ||||     
T  26091717 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 26091618  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  26091617 tctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 26091518  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  26091517 gatctgctgatacccaatagctcttttgatgtc 26091485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 250
Target Start/End: Complemental strand, 18050839 - 18050640
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | |||||||||||| || | ||  || ||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  18050839 ggcctcctctcatcattaagtctctgcttacccttatcagtcggagcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 18050740  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| ||||||||||| || ||||| || || |||||||| |  || ||||| ||||| ||  |||| |||| ||| || || || || |||||||||||    
T  18050739 ccttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctcttgatgtc 18050640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 14043064 - 14043253
Alignment:
Q  58 tctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 157  Q
    ||||||||  || |||||| ||||| || | |||||| |||||||| ||||||  || ||||||||| || ||| || | |||||| |||  | ||||||    
T  14043064 tctcatcaaccattctctgtttacccttatcagcaggagcactataaggctttggacaactctgttgacctttgactttccgctcattcacaatcttgta 14043163  T
Q  158 atgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||| || |||||||| ||||||||||| |||||||| ||||  ||||||||  | |  |||||||| |||||||| |||| ||||||    
T  14043164 atgagccttagtatcctcctcataaatcctgcaactgctcaccagatcagaaaaagtacggatcttctggtaaccaattgcccgcttgat 14043253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 14353094 - 14353283
Alignment:
Q  58 tctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 157  Q
    ||||||||  || |||||| ||||| || | |||||| |||||||| ||||||  || ||||||||| || ||| || | |||||| |||  | ||||||    
T  14353094 tctcatcaaccattctctgtttacccttatcagcaggagcactataaggctttggacaactctgttgacctttgactttccgctcattcacaatcttgta 14353193  T
Q  158 atgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||| || |||||||| ||||||||||| |||||||| ||||  ||||||||  | |  |||||||| |||||||| |||| ||||||    
T  14353194 atgagccttagtatcctcctcataaatcctgcaactgctcaccagatcagaaaaagtacggatcttctggtaaccaattgcccgcttgat 14353283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 40924736 - 40924504
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || |||||   ||||     
T  40924736 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 40924637  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  | |    
T  40924636 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagacttt 40924537  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  40924536 gatctgctgatacccaatagctcttttgatgtc 40924504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 49155631 - 49155863
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | || |||  ||  |||||||| || |||| |||||| ||||| || |||||   ||||     
T  49155631 caaacaatctcaacaggagcatctctcctcttgggcctcctatcctcacccatcctctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 49155730  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||| || || || ||  | || || ||||| |||  |||    
T  49155731 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcatagattctgcatctattaactaactcagagaagactct 49155830  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  49155831 gatctgctgatacccaatagctcttttgatgtc 49155863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 12203719 - 12203497
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||||||  ||| |||| ||||||||||||| || ||| |||||||||||||||| || || || |||| |||||| ||||| || |||||   |||||    
T  12203719 caaacaatcacagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgtttccctttgtcagcaggagcactgtagggcttaggacgac 12203620  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      || || ||  ||   ||   ||||||||| ||||| |||||| |||| |||||||| ||||| || ||||| || || || || |||||||| | | |    
T  12203619 cttgctggcctctgttcctcttctcactcataaccttataatgaactttggtatcctcctcatagattctacagctactcactaactcagaaaattgttt 12203520  T
Q  218 tatcttctgataaccaatagccc 240  Q
     ||||||||||||||||| ||||    
T  12203519 gatcttctgataaccaatggccc 12203497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 15157930 - 15157832
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||||||||| |||||    
T  15157930 agcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 15157832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 187
Target Start/End: Original strand, 13689441 - 13689536
Alignment:
Q  92 aggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    ||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||||||||| |||||    
T  13689441 aggggcactgtacggcttaggacgactctggtgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 13689536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 16726250 - 16726210
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctaca 190  Q
    ||||||||||||||| | |||||||||||||| ||||||||    
T  16726250 accttgtaatgagctctggtatcctcttcatagatcctaca 16726210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 17703264 - 17703224
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctaca 190  Q
    ||||||||||||||| | |||||||||||||| ||||||||    
T  17703264 accttgtaatgagctctggtatcctcttcatagatcctaca 17703224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 166; Significance: 6e-89; HSPs: 25)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 166; E-Value: 6e-89
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 14993301 - 14993088
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||   |||    
T  14993301 aacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcagacg 14993202  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| || ||||| |||||||| ||||||||||||    
T  14993201 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagctttcatatcctcttcataaattctgcaactacttaccaaatcagaaaagttt 14993102  T
Q  216 cttatcttctgata 229  Q
    ||||||||||||||    
T  14993101 cttatcttctgata 14993088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 15267116 - 15267348
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||||||||  ||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||| |||||| ||||||||||||||   |||||    
T  15267116 caaacaatattcgtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatacggcttcggacgac 15267215  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| || ||||| ||||||||||| || || |||| ||| ||||| ||||||||    
T  15267216 tctgttgtcccttgcctctgcgttcactcatcaccttgtaatgagctttcgtgtcctcctcataaatcctgcagctacttatcaaatcagagaagtttct 15267315  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    ||| |||||||||||||| || |||||||||||    
T  15267316 tattttctgataaccaatggctctcttgatgtc 15267348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 18259781 - 18260010
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||||| ||||||||||||| |||||||||||||| |||||||||| || ||||||||||| |||| |||||| ||||||||||||||   | |||    
T  18259781 caaacaatattagtaggagcatctgtcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatacggcttcggatgac 18259880  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| ||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| |||||  | || ||||| || ||||| ||||||||    
T  18259881 tctgctgtcccttgcccctacgctcactcatcaccttgtaatgagattttgtatcttcttcatagatcctgtagctacttactaaatcagagaagtttct 18259980  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    ||| ||||  ||||||||||||||||||||    
T  18259981 tattttctagtaaccaatagccctcttgat 18260010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 15073697 - 15073921
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||| ||||| ||||||||||||||||||||| | |||||| |||||||||||| |||||| ||| | |||| |||||| ||||||||||| ||   |||    
T  15073697 aacagacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgtcagcaggagcactatacggtttcggacg 15073796  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||| | |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || || ||||| |||||||| ||     
T  15073797 actcagctgtcccttacctctacgctcactcatcaccttataatgagcttttgtatcctcttcatagatcctacagctactcaccaaatcagaaaaattc 15073896  T
Q  216 cttatcttctgataaccaatagccc 240  Q
    |||||||| || || || |||||||    
T  15073897 cttatcttttggtagccgatagccc 15073921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 16150976 - 16151208
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||||||||||  ||||||| || |||| || ||| ||||||||||||||   |||||    
T  16150976 caaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaacttctgctttcctttgtcagtaggagcactatacggcttcggacgac 16151075  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| ||||| ||||| || || ||||||||||||||||||||||||||||| ||||| ||||| || || || || |||||||||||||| |||||  |    
T  16151076 tctgctgtcctttgccccttcgatcactcatcaccttgtaatgagcttttgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcat 16151175  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||||||||| ||||| || |||||||||||    
T  16151176 gatcttctgatacccaatggctctcttgatgtc 16151208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 16155122 - 16155354
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||||||||||  ||||||||||||||||||||||||| |||||||||||||  ||||||| || |||| || ||| ||||||||||||||   |||||    
T  16155122 caaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcaacttctgctttcctttgtcagtaggagcactatacggcttcggacgac 16155221  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| ||||| ||||| || || ||||||||||||||||||||||||||||| ||||| ||||| || || || || |||||||||||||| |||||  |    
T  16155222 tctgctgtcctttgccccttcgatcactcatcaccttgtaatgagcttttgtgtcctcctcatagattctgcagctacttaccaattcagagaagttcat 16155321  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||||||||| ||||| || |||||||||||    
T  16155322 gatcttctgatacccaatggctctcttgatgtc 16155354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 14 - 244
Target Start/End: Original strand, 20893367 - 20893597
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||||   ||||||| || |||| |||||| ||||| || |||||   |    
T  20893367 gtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactttaaggcttagga 20893466  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| ||||||||||| || | ||||||||| | ||||||||||||||| || || ||||  |||||||| |||||| ||||||| |||||||||     
T  20893467 cgactctgctgtcccttgcccctcctctcactcattatcttgtaatgagctttggtgtcttctttgtaaatcctgcaactgtttaccaactcagaaaaga 20893566  T
Q  214 ttcttatcttctgataaccaatagccctctt 244  Q
     ||| |||| |||||| |||||||| |||||    
T  20893567 ctctgatctgctgatacccaatagctctctt 20893597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 11204167 - 11203932
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    ||||||||||| |||| ||||||||||||||||||||| ||| | ||||||||||   ||| ||| || |||| |||||| |||||||| |||||   ||    
T  11204167 taacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcttctactttcctttgtcagcaggagcactataaggcttaggac 11204068  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    || |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| ||||| ||| ||||||| ||||| |||      
T  11204067 gattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacatctgtttaccaactcagagaagac 11203968  T
Q  215 tcttatcttctgataaccaatagccctcttgatgtc 250  Q
    ||| |||| |||||| |||||||| || ||||||||    
T  11203967 tctgatctgctgatacccaatagctcttttgatgtc 11203932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 7357603 - 7357839
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| ||||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||| | || |||||   |    
T  7357603 gtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcaatgtaaggcttagga 7357702  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| ||||||||||||| || || | ||||||||| | |||||||||||| || || || ||||||||||||||||| ||| | ||||| |||||||||     
T  7357703 cgattctgttgtcccttacccctcctctcactcattatcttgtaatgagccttggtgtcttcttcataaatcctacacctgttaaccaactcagaaaaga 7357802  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| ||||  ||||| |||||||| || ||||||||    
T  7357803 ctctgatctgttgatacccaatagctcttttgatgtc 7357839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 8709017 - 8709239
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||| ||||| | ||||| || ||| |||||||||||||||| ||||| || |||| |||||| ||||||||  ||||   |||||    
T  8709017 caaacaatctcagcaggaacatctattctcttaggtctcctctcatcattcaatctttgcttccctttgtcagcaggagcactatagagcttcggacgac 8709116  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      || || || |||   || ||||||||||| |||||||||||||||||  |||||||||| || || ||||||||||| ||||||||| |||| |  ||    
T  8709117 cttgctgacctttgttcctccgctcactcataaccttgtaatgagctttgatatcctcttcgtagattctacaactgctcaccaattcaaaaaattgcct 8709216  T
Q  218 tatcttctgataaccaatagccc 240  Q
     ||||||||||||||||| ||||    
T  8709217 aatcttctgataaccaatggccc 8709239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 13879445 - 13879642
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| ||||||| | ||||||| ||||| || ||| |||||||||||||||| ||||  || |||| | |||| ||||| || |||||   |    
T  13879445 gtaacaaacaatctcagtagaaacatctcttctcttaggtctcctctcatcattcaatctttgctaccctttgtcatcaggagcactgtagggcttcgga 13879544  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 211  Q
    ||||  || || ||||||   || ||||||||| | ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||||||||||    
T  13879545 cgaccttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacaactactcaccaattcagaaaa 13879642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 44658798 - 44658566
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | |||| |  ||   ||||||| || ||||  ||||| ||||| || |||||   ||||     
T  44658798 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatgacccatcttctgctttcctttgtccgcaggagcactgtaaggcttaggacgat 44658699  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || ||||| ||| | ||||| ||||| |||  |||    
T  44658698 tctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctacacctgttaaccaactcagagaagactct 44658599  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| ||||| || |||||||||||    
T  44658598 gatctgctgatatccaatggctctcttgatgtc 44658566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 3261726 - 3261494
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || |||||   ||||     
T  3261726 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 3261627  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  3261626 tctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 3261527  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  3261526 gatctgctgatacccaatagctcttttgatgtc 3261494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 29450469 - 29450237
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  |||||||||||||||||| |||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || || ||   ||||     
T  29450469 caaacaatctcaacaggagcatctctcctcttaggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggtttaggacgat 29450370  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||||||  | || ||  | ||||| ||||||||| ||||    
T  29450369 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcataaattttgcacctattaaccaactcagaaaagattct 29450270  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||  ||||| ||||||||||| ||||||||    
T  29450269 gatctgttgatatccaatagcccttttgatgtc 29450237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 250
Target Start/End: Complemental strand, 51603691 - 51603492
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | |||||||||||| || | ||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  51603691 ggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 51603592  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    | || ||||||||||| || ||||| || || |||||||| |  || ||||| ||||| ||  |||| |||| ||| || || || || |||||||||||    
T  51603591 ctttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctcttgatgtc 51603492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 250
Target Start/End: Complemental strand, 53750369 - 53750170
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | |||||||||||| || | ||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  53750369 ggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 53750270  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    | || ||||||||||| || ||||| || || |||||||| |  || ||||| ||||| ||  |||| |||| ||| || || || || |||||||||||    
T  53750269 ctttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctcttgatgtc 53750170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 176
Target Start/End: Original strand, 14697441 - 14697599
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| || ||||||| || |  | |||||| |||||||||||||||| |||||||| || | |||||| ||||| || ||||||  |||||    
T  14697441 caaacaatctcagcagtagcatctttctttctaggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgtaaggctttggacgac 14697540  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctct 176  Q
    | || || ||||||||| | | |||| |||  || |||||||||||||| |||||||||    
T  14697541 tttgctgacccttgcctttcctctcattcacaactttgtaatgagctttggtatcctct 14697599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 14162942 - 14163039
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||| ||||| || ||||||| |||||||||||| |||||||| ||||  || ||||| ||||  |||||||| |||||||| |||||||||||    
T  14162942 accttgtagtgagccttagtatccttttcataaatcctgcaactgctcaccagctctgaaaaatttcggatcttctggtaaccaattgccctcttgat 14163039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 27903851 - 27903936
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 229  Q
    ||||||||||| || ||||| ||||||||||| ||||||||| |||| || || ||||||||||| || ||||| |||||||||||    
T  27903851 ctcatcaccttatagtgagcctttgtatcctcctcataaatcttacagctactcaccaattcagagaaatttctgatcttctgata 27903936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 14300583 - 14300485
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||||||||| |||||    
T  14300583 agcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 14300485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 212
Target Start/End: Original strand, 8416 - 8570
Alignment:
Q  58 tctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 157  Q
    ||||||||  || |||||| ||||| || | |||||| ||||| || |||||   ||||||||| || || ||| || | |||||| |||  | ||||||    
T  8416 tctcatcaaccattctctgtttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacctttggcttttcgctcattcacaatcttgta 8515  T
Q  158 atgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    |||||  || |||||||| |||||||| || |||||||| ||||| |||||||||    
T  8516 atgagtcttggtatcctcctcataaattctgcaactgctcaccaactcagaaaag 8570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 207
Target Start/End: Complemental strand, 18604359 - 18604302
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcag 207  Q
    ||||||||||||||| | |||||||||||||| |||||||| ||| | ||||| ||||    
T  18604359 accttgtaatgagctatggtatcctcttcatagatcctacagctgttcaccaaatcag 18604302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 15574 - 15514
Alignment:
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    |||||||||||  || |||||||| |||||||| || |||||||| ||||| |||||||||    
T  15574 cttgtaatgagtcttggtatcctcctcataaattctgcaactgctcaccaactcagaaaag 15514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 193
Target Start/End: Original strand, 19635548 - 19635648
Alignment:
Q  93 ggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaac 192  Q
    |||||||| ||||||||   || |||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||||||||| ||||| ||||    
T  19635548 ggggcactgtacggcttaggacaactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcctgcaac 19635647  T
Q  193 t 193  Q
    |    
T  19635648 t 19635648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 27903721 - 27903801
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcagg 94  Q
    ||||||||||| ||||  |||||||||||||| | | |||| | |||||||||||||||| || || || |||| ||||||    
T  27903721 gtaacaaacaacatcaacaggagcatctctccccctaggccgcctctcatcattcaatctttgttttcctttgtcagcagg 27903801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 160; Significance: 2e-85; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 16825441 - 16825210
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||| |||||| |||| || ||||||||||||||||||   |||    
T  16825441 aacaaacaatatcagtaggagcatctctcatcttgggcctcctctcatctttcaatctctacttacccttgtcaggaggggcactatacggcttcggacg 16825342  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||| | |||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||| ||||||||||||    
T  16825341 actcagctgtcccttgcctctgcgctcactcatcaccttgtaatgagctttcgtatcttcttcatagatcctacagctgcttaccaactcagaaaagttt 16825242  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||||||||||||||||||||||    
T  16825241 cttatcttctgataaccaatagccctcttgat 16825210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 14290692 - 14290463
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||  ||||| ||||| |||| |||||| ||||||||||| ||   |||||    
T  14290692 caaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacgac 14290593  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| ||||| |||||||||||||| || ||||||||||| |||||||||||||| || |||||||||||| ||||||||||||| |||||    
T  14290592 tctgctgtcccttacctctgcgctcactcatcactttataatgagctttggtatcctcttcatagattctacaactgctttccaattcagaaaaatttct 14290493  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    |||||| |||||||||||||||||||||||    
T  14290492 tatcttttgataaccaatagccctcttgat 14290463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 12181313 - 12181545
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||| ||| ||||||||||||||||||||||||| |||| |||||||||| || |||| |||||| |||| |||||| ||||||||||||||   |||||    
T  12181313 caaaaaatgtcagtaggagcatctctcctcttggtcctcctctcatcatttaacctctacttacccttgtcagcaggagcactatacggcttcagacgac 12181412  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||||||||| || |||||||||||||||||||||||||| || ||||| |||||||||||||| | ||||||||||||||| ||||| ||    
T  12181413 tctgttgtcccttgcctcttcgttcactcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagccgcttaccaattcagagaagttcct 12181512  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    ||| |||||||| ||||| |  |||||||||||    
T  12181513 tattttctgatagccaatggttctcttgatgtc 12181545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 17494615 - 17494848
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagc----aggggcactatacggcttttaa 113  Q
    |||||||| |||||| ||||||||||||||||||||||| |||||||||| || ||||||||||| || | |||    ||| |||||||| |||||  ||    
T  17494615 caaacaatctcagtatgagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttctcagccagcaggagcactatatggcttcgaa 17494714  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||||| |||||||||||| |||| ||||||||||||||||||||||||||||| |||||||| ||||| || ||||| ||||||||||| ||||||||||    
T  17494715 cgactttgttgtcccttggctctgcgctcactcatcaccttgtaatgagctttggtatcctcctcatagattctacagctgcttaccaactcagaaaagt 17494814  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||||||||||||||||| || ||||||||    
T  17494815 ttcttatcttctgataaccaatggctctcttgat 17494848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 28 - 247
Target Start/End: Original strand, 35983160 - 35983379
Alignment:
Q  28 cagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcc 127  Q
    |||||||||||||||||||||| |||||| ||||||||||||  ||||| ||||| |||| |||||| ||||||||||| ||   || |||||| |||||    
T  35983160 cagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacaactctgctgtcc 35983259  T
Q  128 cttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctga 227  Q
    ||| ||||| | |||||||||||| || ||||||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||    
T  35983260 cttacctctgcactcactcatcactttataatgagctttggtatcctcttcatagattctacaactgcttaccaattcagaaaaatttcttatcttatga 35983359  T
Q  228 taaccaatagccctcttgat 247  Q
    ||||||||||||||||||||    
T  35983360 taaccaatagccctcttgat 35983379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 245
Target Start/End: Original strand, 17189341 - 17189570
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||||||||||  |||||||||||||||||||| |||| |||||||||| ||||||||||| || ||||||||||| ||||| ||||||||   |||    
T  17189341 aacaaacaatatcaacaggagcatctctcctcttggacctcctctcatcattaaatctctgctttcccttgttagcaggagcactgtacggcttcggacg 17189440  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| || ||||||||||| || ||||||||||||||||||||||||||||| ||||||||||| || ||||| || |||||||| ||| | ||||||    
T  17189441 actctgctggcccttgcctctgcggtcactcatcaccttgtaatgagcttttgtgtcctcttcatagattctacagctacttaccaactcaaagaagttt 17189540  T
Q  216 cttatcttctgataaccaatagccctcttg 245  Q
    || |||||||| || |||||||||||||||    
T  17189541 ctgatcttctggtatccaatagccctcttg 17189570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 24190271 - 24190501
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||||||||||  |||||||||||||||||||  |||| |||||||||||||||||||||| || |||| |||||| ||||| ||||||||   |||    
T  24190271 aacaaacaatatcaacaggagcatctctcctcttgtacctcctctcatcattcaatctctgctttcccttgtcagcaggagcactgtacggcttcggacg 24190370  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| || || |||||||| || ||| |||||||||||||||||||||| || ||||||||||| || ||||| || |||||||| ||||| ||||||    
T  24190371 actctgctggcc-ttgcctctgcggtcagtcatcaccttgtaatgagctttcgtgtcctcttcatagattctacagctacttaccaaatcagagaagttt 24190469  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    || |||||||| || |||||||||||||||||    
T  24190470 ctgatcttctggtatccaatagccctcttgat 24190501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 240
Target Start/End: Complemental strand, 12857658 - 12857434
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||| ||||| |||||||||||||||||||| || |||||| |||||||||||| ||  || ||||| |||| |||||| ||||||||||| |||  |||    
T  12857658 aacagacaatctcagtaggagcatctctccttttaggcctcctctcatcattcagtccttgtttacctttgtcagcaggagcactatacggttttggacg 12857559  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||  |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| || ||||| || || ||||| ||| ||||  ||    
T  12857558 actctactgtcccttgcctctacgctcactcatcaccttataatgagcttttgtatcctcctcatagattctacagctactcaccaaatcaaaaaaaatt 12857459  T
Q  216 cttatcttctgataaccaatagccc 240  Q
    |||||||| || || ||||| ||||    
T  12857458 cttatcttttggtagccaatggccc 12857434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 12357687 - 12357455
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| ||||| ||||||||||||||||||| ||||||||||||  |||| ||| || |||| |||||| |||||||| || ||   |||||    
T  12357687 caaacaatctcagcaggagtatctctcctcttgggcctcctctcatcattcagcctctactttcccttgtcagcaggagcactatatggtttaggacgac 12357588  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||| || || |||||||| ||||| || || || ||||| ||||| ||  ||||    
T  12357587 tctgatgtcccttacctctgcgctcactcatcaccttgtaatgagctttagtgtcttcttcatatatcctgcagctactcaccaaatcagagaaaattct 12357488  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    |||||||||||| | ||| || |||||||||||    
T  12357487 tatcttctgatacctaatggctctcttgatgtc 12357455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 31692349 - 31692113
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| || ||||| |||||| ||||||||| |||||||||||||  ||||||| || |||| |||||| ||||||||||||||   |    
T  31692349 gtaacaaacgatctcagcagaagcatttctcctattgggcctcctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcgga 31692250  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| ||||| ||||  || || |||||||||||||| ||||||||||| || ||||| ||||| || || || || |||||||||||||| ||||    
T  31692249 cgactctgctgtcctttgctccttcgatcactcatcaccttataatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagt 31692150  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| ||||||||||| ||||| || |||||||||||    
T  31692149 ttctgatcttctgatacccaatggctctcttgatgtc 31692113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 31941868 - 31942104
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| |||||||| |||||| ||||||||| |||||||||||||  ||||||| || |||| |||||| ||||||||||||||   |    
T  31941868 gtaacaaacgatctcagcaggagcatttctcctattgggcctcctctcatcattcaacttctgcttccctttgtcagcaggagcactatacggcttcgga 31941967  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| | ||| ||||  || || |||||||||||||| ||||||||||| || ||||| ||||| || || || || |||||||||||||| ||||    
T  31941968 cgactctgctatcctttgctccttcgatcactcatcaccttataatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagt 31942067  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| ||||||||||| ||||| || |||||||||||    
T  31942068 ttctgatcttctgatacccaatggctctcttgatgtc 31942104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 16831690 - 16831456
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||| || |||| ||||||||||||||| || |||||| |||||||||| | |||||||||||| || | |||||||||||||||||||||   | |    
T  16831690 aacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattaagtctctgcttacccttatcagcaggggcactatacggcttaggatg 16831591  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| |||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| ||||| ||||  |||||||| ||||| ||  ||    
T  16831590 actctgctgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcctcctcatagatcctgcaacgacttaccaaatcagagaaaatt 16831491  T
Q  216 cttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||||||  || || || || || |||||||||||    
T  16831490 cttatctgttggtaccctatggctctcttgatgtc 16831456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 208
Target Start/End: Complemental strand, 16384534 - 16384342
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||| || |||| ||||||||||||||| || |||||| |||||||||| | |||||||||||| |||| |||||||||||| || |||||   |||    
T  16384534 aacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactgtatggcttaggacg 16384435  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcaga 208  Q
    ||||||||||||||| ||||| ||||||||||||||||| |||||||||||  | ||||| ||||| |||||||| |  |||||||| |||||    
T  16384434 actctgttgtcccttacctcttcgctcactcatcaccttataatgagctttgctgtcctcctcatagatcctacagcaacttaccaaatcaga 16384342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 32 - 250
Target Start/End: Complemental strand, 18131493 - 18131275
Alignment:
Q  32 aggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttg 131  Q
    ||||||||||||||||||||||||| |||||| ||||| |||||| || || |||| |||||| |||||||| || ||   ||||||||| ||||| ||     
T  18131493 aggagcatctctcctcttgggcctcctctcattattcagtctctgttttcctttgtcagcaggagcactatatggtttaggacgactctgctgtccttta 18131394  T
Q  132 cctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataac 231  Q
    ||||| || ||||||||||| |||||||||||||| || || |||||||| |||||||| || || ||||  ||||| ||  |||||||||||||||| |    
T  18131393 cctctccgttcactcatcactttgtaatgagctttagtgtcttcttcatatatcctacagctactcaccatatcagagaaaattcttatcttctgatacc 18131294  T
Q  232 caatagccctcttgatgtc 250  Q
    |||| || |||||||||||    
T  18131293 caatggctctcttgatgtc 18131275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 15 - 247
Target Start/End: Complemental strand, 11958344 - 11958112
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    ||||||||||| |||| ||||||||||||||||||  ||||| | |||||||||| |||||| || || |||| |||||| ||||| || || ||   ||    
T  11958344 taacaaacaatttcagcaggagcatctctcctcttaagcctcctatcatcattcattctctgtttccctttgtcagcaggagcactgtaaggtttaggac 11958245  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    || |||| |||||||| ||||| | |||||||||||||||||||||| ||||||| || || ||||||||||  || ||||||||||| ||||| ||       
T  11958244 gattctgctgtcccttacctctcctctcactcatcaccttgtaatgaacttttgtgtcttcctcataaatcccgcagctgcttaccaactcagagaaaac 11958145  T
Q  215 tcttatcttctgataaccaatagccctcttgat 247  Q
    ||| ||||||||||| |||||||| || |||||    
T  11958144 tctaatcttctgatacccaatagctcttttgat 11958112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 16326872 - 16326641
Alignment:
Q  15 taacaaacaa-tatcagtaggagca-tctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggctttta 112  Q
    |||||||||| | |||| ||||||| |||||||||||||| ||| | ||||||||||   | ||||| || |||| |||||| ||||| |  |||||       
T  16326872 taacaaacaagtctcagcaggagcagtctctcctcttgggtctcctatcatcattcaccttttgctttcctttgtcagcaggagcactgtcaggcttagg 16326773  T
Q  113 acgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    ||||||||| ||||||||||| || | ||||||||| | ||||||||||||||| || || |||||||||||||| |||||| ||||||| ||||| |||    
T  16326772 acgactctgctgtcccttgcccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaatcctgcaactgtttaccaactcagagaag 16326673  T
Q  213 tttcttatcttctgataaccaatagccctctt 244  Q
      ||| |||| |||||| |||||||| |||||    
T  16326672 actctgatctgctgatacccaatagctctctt 16326641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 12508729 - 12508496
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||  |||||||||| |||  || |  |||||||||||||||||||||  ||||||| ||| || | ||| || ||||| || ||||||  |    
T  12508729 gtaacaaacaacttcagtaggagtatccttctttatgggcctcttctcatcattcaccctctgctcacccttatcagccggagcactgtaaggctttgga 12508630  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||||| || || | ||| ||| | | |||||||||  |||||||||||||||| |||||||  ||||| || || |||||||| |||| |||||||||||    
T  12508629 cgactttgctgactcttacctttcctctcactcatagccttgtaatgagctttcgtatccttctcatagattctgcaactgctcaccagttcagaaaagt 12508530  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
    | |  ||||||||||| ||||| |||||||||||    
T  12508529 tacagatcttctgatatccaatggccctcttgat 12508496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 2245712 - 2245610
Alignment:
Q  138 cgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 237  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||||||| | || || ||||| |||||||||||||| ||||||||||||||||| |    
T  2245712 cgctcactcatcaccttataatgagctttggtatcatcctcataaatcctaaagctactcaccaactcagaaaagtttctaatcttctgataaccaatgg 2245613  T
Q  238 ccc 240  Q
    |||    
T  2245612 ccc 2245610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 10408933 - 10409169
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| ||||  |||||||||||||||||||||||| | ||||||  ||   |||| ||||| |||| |||||| ||||| || |||||   |    
T  10408933 gtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatcacccatcttctgtttacccttgtcagcaggagcactgtaaggcttagga 10409032  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||||||||      
T  10409033 cgactctggtgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagaaaaaa 10409132  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| |||| |||||| |||||||| || ||||||||    
T  10409133 ctctgatctgctgatatccaatagctcttttgatgtc 10409169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 15230572 - 15230789
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||| ||||| | ||||| |||||| |||||||||| ||||| ||||| || |||| |||||| |||||||| |||||   |||||    
T  15230572 caaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttgcttccctttgtcagcaggagcactatagggcttaggacgac 15230671  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      ||||| || |||   ||   ||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || ||  |||| |||||||| | |||    
T  15230672 cttgttggcctttgttcctcttctcactcataaccttataatgagctttggtatcctcctcatagattctacagctactccccaactcagaaaattgtct 15230771  T
Q  218 tatcttctgataaccaat 235  Q
     |||||||||||||||||    
T  15230772 gatcttctgataaccaat 15230789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 15236440 - 15236657
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||| ||||| | ||||| |||||| |||||||||| ||||| ||||| || |||| |||||| |||||||| |||||   |||||    
T  15236440 caaacaatctcagcaggaacatcttttctcttaggcctcctctcatcatttaatctttgcttccctttgtcagcaggagcactatagggcttaggacgac 15236539  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      ||||| || |||   ||   ||||||||| ||||| ||||||||||| |||||||| ||||| || ||||| || ||  |||| |||||||| | |||    
T  15236540 cttgttggcctttgttcctcttctcactcataaccttataatgagctttggtatcctcctcatagattctacagctactccccaactcagaaaattgtct 15236639  T
Q  218 tatcttctgataaccaat 235  Q
     |||||||||||||||||    
T  15236640 gatcttctgataaccaat 15236657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 28757288 - 28757520
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || |||||   ||||     
T  28757288 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 28757387  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  28757388 tctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 28757487  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  28757488 gatctgctgatacccaatagctcttttgatgtc 28757520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 47126913 - 47127145
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||  |||||||| || |||| |||||| ||||| || |||||   ||||     
T  47126913 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 47127012  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  47127013 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 47127112  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  47127113 gatctgctgatacccaatagctcttttgatgtc 47127145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 51 - 190
Target Start/End: Original strand, 13945026 - 13945165
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | |||||||||||| || | ||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  13945026 ggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 13945125  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctaca 190  Q
    |||| ||||||||||| || ||||| || || ||||||||    
T  13945126 ccttataatgagctttggtgtcctcctcgtagatcctaca 13945165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 51 - 250
Target Start/End: Complemental strand, 8744517 - 8744318
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | |||||||||||| || | ||  |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  8744517 ggcctcctctcatcattaagtctctgcttacccttatcagtcggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 8744418  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    | || ||||||||||| || ||||| || || |||||||| |  || ||||| ||||| ||  |||| |||| ||| || || || || |||||||||||    
T  8744417 ctttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagagaaaattctaatctgctggtatcctatggctctcttgatgtc 8744318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 32 - 247
Target Start/End: Complemental strand, 12843260 - 12843045
Alignment:
Q  32 aggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttg 131  Q
    |||||||||| || || | |||| | |||||||| ||| |||||| || || || | |||||| ||||||||  |||||  ||||||||| || || |||    
T  12843260 aggagcatctttcttcctaggccgcctctcatcaatcattctctgtttgcccttatcagcaggagcactataaagctttggacgactctgctgacctttg 12843161  T
Q  132 cctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataac 231  Q
     || | |||||| |||  | |||||||||||| || |||||||| ||||||||||| |||||||| ||||  || |||||||| |  |||||||| ||||    
T  12843160 acttttcgctcattcacaatcttgtaatgagccttagtatcctcctcataaatcctgcaactgctcaccagctcggaaaagttacgaatcttctggtaac 12843061  T
Q  232 caatagccctcttgat 247  Q
    |||| |||| ||||||    
T  12843060 caattgcccgcttgat 12843045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 13317603 - 13317500
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctct 243  Q
    |||||| |||| || ||||| ||||||||||| ||||| |||||||||||||| ||||| || || || ||| | ||||||||||| ||||| || ||||    
T  13317603 ctcatcgccttatagtgagcctttgtatcctcctcatatatcctacaactgctcaccaactccgagaaatttatgatcttctgatatccaatggctctct 13317504  T
Q  244 tgat 247  Q
    ||||    
T  13317503 tgat 13317500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 235
Target Start/End: Original strand, 15262623 - 15262806
Alignment:
Q  52 gcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcac 151  Q
    ||||| |||||||||||| ||| || ||||| || | |||||| ||  | || ||||||  |||||| |||||  | |||||| | |||||| |||  ||    
T  15262623 gcctcctctcatcattcattctttgtttacccttatcagcaggagcgttgtaaggctttggacgactttgttgatctttgcctttccgctcattcacaac 15262722  T
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 235  Q
    |||||||||||| || |||||||| ||||| || || |||||||| ||||  ||||||||||| |  |||||||  ||||||||    
T  15262723 cttgtaatgagccttagtatcctcctcatagattctgcaactgctcaccagctcagaaaagttacggatcttctagtaaccaat 15262806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 18 - 78
Target Start/End: Complemental strand, 15008744 - 15008684
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgct 78  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||||||||||| ||||    
T  15008744 caaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgct 15008684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 247
Target Start/End: Complemental strand, 14578458 - 14578363
Alignment:
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||||||| || ||||| || ||||||||||| |||||||| ||||  | ||||||||  |  |||||||| |||||||| || ||||||||    
T  14578458 cttgtaatgagccttggtatcatcctcataaatcctgcaactgctcaccagcttagaaaagtcacggatcttctggtaaccaattgctctcttgat 14578363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 72 - 187
Target Start/End: Complemental strand, 15713176 - 15713061
Alignment:
Q  72 ctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtat 171  Q
    |||||||| || || | ||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || ||||    
T  15713176 ctctgcttccctttatcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtat 15713077  T
Q  172 cctcttcataaatcct 187  Q
    |||||||||| |||||    
T  15713076 cctcttcatagatcct 15713061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 2037072 - 2037014
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctg 76  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||| ||||||||||    
T  2037072 caaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 2037014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 2040813 - 2040755
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctg 76  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||| ||||||||||    
T  2040813 caaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 2040755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 187
Target Start/End: Original strand, 3688954 - 3689068
Alignment:
Q  73 tctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatc 172  Q
    |||| ||||| |||| ||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||    
T  3688954 tctgtttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatc 3689053  T
Q  173 ctcttcataaatcct 187  Q
    |||||| || |||||    
T  3689054 ctcttcgtagatcct 3689068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 190
Target Start/End: Original strand, 6603757 - 6603863
Alignment:
Q  84 ttgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaa 183  Q
    |||| ||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||| ||||| |    
T  6603757 ttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttggtatcctcctcataga 6603856  T
Q  184 tcctaca 190  Q
    |||||||    
T  6603857 tcctaca 6603863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 10008627 - 10008725
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| || |||||||||||||| |||||    
T  10008627 agcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 10008725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 10909237 - 10909335
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| || |||||||||||||| |||||    
T  10909237 agcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 10909335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Original strand, 14039715 - 14039773
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctg 76  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||| ||||||||||    
T  14039715 caaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 14039773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Complemental strand, 23079054 - 23079012
Alignment:
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactg 194  Q
    |||||||||||| || |||||||||||||||||||| ||||||    
T  23079054 cttgtaatgagccttggtatcctcttcataaatcctgcaactg 23079012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 10417079 - 10416994
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 229  Q
    |||||||||||||||||||| || |||||||| |||||||| || || || || |||| ||| || ||  |||| |||||||||||    
T  10417079 ctcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagctactcaccagttctgagaaaattctgatcttctgata 10416994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 15459459 - 15459410
Alignment:
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactgcttacca 201  Q
    |||||||||||  ||||||||||| ||||||||||| |||||||| ||||    
T  15459459 cttgtaatgagtctttgtatcctcctcataaatcctgcaactgctcacca 15459410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 3234 - 3463
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||   |||||    
T  3234 caaataatctcagtaggagcatctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcggacgac 3333  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| ||||| ||  | |||||||||||||||||||| ||    
T  3334 tctgttgtcccttgcctctgcgctcactcatcaccttataatgagctttcgtatcctcttcatatatcctgcaggtacttaccaattcagaaaagttcct 3433  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    |||||| |||||||||||||||||||||||    
T  3434 tatcttttgataaccaatagccctcttgat 3463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 158; Significance: 4e-84; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 5841 - 5608
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||| |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| |||||| ||||||||||||||   |    
T  5841 gtaataaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcagtctctgcttacccttgtcagcaggagcactatacggcttcgga 5742  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
     ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||||||| ||||| ||||    
T  5741 tgactctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcttcttcatagatcctacagctgcttaccaaatcagagaagt 5642  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
    || |||| ||||||||||||||||||||||||||    
T  5641 ttattattttctgataaccaatagccctcttgat 5608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 154; Significance: 9e-82; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 23274564 - 23274793
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||| |||||| ||||||||| ||||   |||||    
T  23274564 caaacaatttcagtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatactgcttcggacgac 23274663  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||| ||||||||||||||    
T  23274664 tctgttgtcccttgcccctacgttcactcatcaccttgtaatgagccttcgtatcctcttcatagatcctacagctgcttaccaactcagaaaagtttct 23274763  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    ||| ||||||||||||||||||||||||||    
T  23274764 tattttctgataaccaatagccctcttgat 23274793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 19716493 - 19716260
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| ||||||||||||||| ||||||||| |||||||||||||||||||||| || |||| | || ||||||| || || ||   |    
T  19716493 gtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttagga 19716394  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| || || || ||||| ||||| || ||||||||||| ||||| || |    
T  19716393 cgactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttagtgtcttcctcatatatcctgcagctgcttaccaactcagagaaat 19716294  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
    |||| ||||||||||| ||||| || ||||||||    
T  19716293 ttctaatcttctgatagccaatggctctcttgat 19716260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 19721056 - 19720823
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| ||||||||||||||| ||||||||| |||||||||||||||||||||| || |||| | || ||||||| || || ||   |    
T  19721056 gtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcaacaagggcactgtatggtttagga 19720957  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| ||||| ||||||||||||||||| ||||||||||| || || || ||||| ||||| || ||||||||||| ||||| || |    
T  19720956 cgactctgctgtcccttacctcttcgctcactcatcaccttataatgagctttagtgtcttcctcatatatcctgcagctgcttaccaactcagagaaat 19720857  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
    |||| ||||||||||| ||||| || ||||||||    
T  19720856 ttctaatcttctgatagccaatggctctcttgat 19720823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 23097490 - 23097261
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||| || |||| ||||||||||||||||||||||||| |||||||||||| ||  ||||| || |||| |||||||||||| ||||||||     |||    
T  23097490 caaactatctcagcaggagcatctctcctcttgggcctcctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttagggagac 23097391  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| ||| | || ||||| ||||||||||||||||||||||||||||||| ||| || || || || || || || ||||| || ||||||||  ||||    
T  23097390 tctgatgtgctttacctctccgctcactcatcaccttgtaatgagcttttgaatcttcctcgtagattctgcagctacttacaaactcagaaaaagttct 23097291  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
     ||||||||||| ||||  |||||||||||    
T  23097290 gatcttctgatagccaaaggccctcttgat 23097261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 28350846 - 28351068
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||||||||||| ||||  || |||| | |||| |||||||| |||||   |||||    
T  28350846 caaacaatctcagcaggaacatctctcctcttaggtctcctctcatcattcaatctttgctcccctttgtcaacaggagcactatagggcttcggacgac 28350945  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      || || ||||||   || |||||| |  | ||||| || |||||| | |||||| |||||||||||||||| |||||||||||||||||||| | |||    
T  28350946 cttgctgacccttgttcctccgctcattactaaccttatagtgagctatcgtatccacttcataaatcctacagctgcttaccaattcagaaaattgtct 28351045  T
Q  218 tatcttctgataaccaatagccc 240  Q
     ||||||||||| ||||| ||||    
T  28351046 gatcttctgatagccaatggccc 28351068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 211
Target Start/End: Original strand, 12577357 - 12577517
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | |||||||||||| |||| ||| |||||||||||||| ||   |||| |||| |||||||| ||||| |||||||||||||    
T  12577357 ggcctcctctcatcattaagtctctgcttacccttgtcagccggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcatca 12577456  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 211  Q
    | || ||||||||||| || ||||| || || |||||||| |  || ||||| ||||||||    
T  12577457 ctttataatgagctttggtgtcctcctcgtagatcctacagcgactcaccaaatcagaaaa 12577517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 21901508 - 21901730
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| ||||||||| ||||||| ||||| || ||| ||||||||||||||||||| || || |||| |||||| ||||| || |||||   | |||    
T  21901508 caaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctctgtttccctttgtcagcaggagcactgtagggcttcggatgac 21901607  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      || || || |||   ||   ||||||||| ||||| ||||||| ||| |||||||| |||||||| ||||| ||||| |||||||||||||| | |||    
T  21901608 cttgatggcctttgttcctcttctcactcataaccttataatgagatttcgtatcctcctcataaattctacagctgctcaccaattcagaaaattgtct 21901707  T
Q  218 tatcttctgataaccaatagccc 240  Q
     ||||| || |||||||| ||||    
T  21901708 gatcttttggtaaccaatggccc 21901730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 20848612 - 20848789
Alignment:
Q  73 tctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatc 172  Q
    ||||||| || |||| |||||| ||||| || |||||   |||| ||||||||||||| || || | ||||||||| | ||| ||||||||||| || ||    
T  20848612 tctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtc 20848711  T
Q  173 ctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||||||||| || || ||| | ||||| ||||||||| |||| ||||  ||||| |||||||| |||||||||||    
T  20848712 ttcttcataaattctgcacctgttaaccaactcagaaaagattctgatctgttgatatccaatagctctcttgatgtc 20848789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 22742306 - 22742209
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||||||||| || ||||||||||| |||||||| |||||||| ||||  || || ||   ||  |||||||| |||||||| |||||||||||    
T  22742306 accttgtaatgagccttggtatcctcttcgtaaatcctgcaactgctcaccagctcggagaaaactcggatcttctggtaaccaattgccctcttgat 22742209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 24817179 - 24817094
Alignment:
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaata 236  Q
    |||||||||||||||| ||||| || ||||| || || |||||||| |||| |||||||||||  |  ||||||||||| ||||||    
T  24817179 ccttgtaatgagctttagtatcttcctcatagattctgcaactgctcaccagttcagaaaagtaacggatcttctgatacccaata 24817094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 10871889 - 10871987
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||||||||   |||||||||||||||||| ||  | | |||| |||  |||||||| ||||| || ||||||||||| || |||||    
T  10871889 agcaggggcactgtacggcttaggacgactctgttgtcccttacccttcctctcattcactaccttgtagtgagccttggtatcctcttcgtagatcct 10871987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Original strand, 24265409 - 24265507
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || ||||||||||| || |||||    
T  24265409 agcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcgtagatcct 24265507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 149; Significance: 8e-79; HSPs: 2)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 19 - 247
Target Start/End: Complemental strand, 62706 - 62478
Alignment:
Q  19 aaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgact 118  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||||||||||||||||||   ||||||    
T  62706 aaacaatatcagtaggagcatctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggggcactatacggcttcggacgact 62607  T
Q  119 ctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttctt 218  Q
    ||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || || |||||||| ||||| || || |||    
T  62606 ctgctgccccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctacttaccaactcagagaaattcctt 62507  T
Q  219 atcttctgataaccaatagccctcttgat 247  Q
    ||||| ||||| |||||||||||||||||    
T  62506 atcttttgatagccaatagccctcttgat 62478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 247
Target Start/End: Complemental strand, 65214 - 65028
Alignment:
Q  61 catcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatg 160  Q
    ||||||||| ||||||||| || || | ||||||||||||||| |||||    |||||||||||||| ||    || | |||||||||||||||||||||    
T  65214 catcattcagtctctgcttgcccttatcagcaggggcactatatggcttcgggcgactctgttgtccattattccttctctcactcatcaccttgtaatg 65115  T
Q  161 agcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||||||||||||||||||| || || || || ||||| ||||| || ||||| || |||||||||||||| || ||||||||    
T  65114 agcttttgtatcctcttcataaattctgcagctactcaccaactcagagaaatttctgattttctgataaccaatggctctcttgat 65028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 149; Significance: 8e-79; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 21870383 - 21870163
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtc 126  Q
    ||||||||||||||||||||||| |||||| || ||||||||||| |||||||||| |||| |||||||||||||||||||||   ||||||||| ||||    
T  21870383 tcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgcttacccttgtcagcaggggcactatacggcttcggacgactctgctgtc 21870284  T
Q  127 ccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 226  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| |||||||| ||    
T  21870283 ccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctacttaccaattcagaaaagttccttatcttttg 21870184  T
Q  227 ataaccaatagccctcttgat 247  Q
    ||| |||||||||||||||||    
T  21870183 atagccaatagccctcttgat 21870163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 21874663 - 21874443
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtc 126  Q
    ||||||||||||||||||||||| |||||| || ||||||||||| |||||||||| |||| |||||||||||||||||||||   ||||||||| ||||    
T  21874663 tcagtaggagcatctctcctcttaggcctcctcccatcattcaatttctgcttacccttgtcagcaggggcactatacggcttcggacgactctgctgtc 21874564  T
Q  127 ccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 226  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||||||||||| |||||||| ||    
T  21874563 ccttgcctctacgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctgcagctacttaccaattcagaaaagttccttatcttttg 21874464  T
Q  227 ataaccaatagccctcttgat 247  Q
    ||| |||||||||||||||||    
T  21874463 atagccaatagccctcttgat 21874443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 23563282 - 23563050
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||||||||||||||||||||||||||||| |||||| ||| || ||||||||| | || | |||||| ||||||||||||||   || ||    
T  23563282 caaacaatgtcagtaggagcatctctcctcttgggcctcctctcattatttaacctctgcttatccttttcagcaggagcactatacggcttcggacaac 23563183  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||  |||||||| |||||||| |||||||||| ||||||||||||||| || ||||| ||||||||||| || || |||||||| | | | || |||||    
T  23563182 tcttctgtcccttacctctacgttcactcatcatcttgtaatgagctttagtgtcctcctcataaatcctgcagctacttaccaaattaaagaaatttct 23563083  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||||||||||||||| || |||||||||||    
T  23563082 aatcttctgataaccaatggctctcttgatgtc 23563050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 23078021 - 23077790
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||| ||||| |||| ||||||||||||||||||||||||| | ||||||||||   ||||||| || |||| |||||| ||||| || || ||   |||    
T  23078021 aacatacaatctcagcaggagcatctctcctcttgggcctcctatcatcattcatcttctgcttccctttgtcagcaggagcactgtaaggtttaggacg 23077922  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| |||||||| || || | ||||||||| ||||||||||||||||| || || || ||||| ||||| || ||||||||||| ||||| ||  ||    
T  23077921 actctgctgtcccttacccctcctctcactcattaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaactcagagaaaatt 23077822  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    || ||||||||||| |||||||| || |||||    
T  23077821 ctaatcttctgatacccaatagctcttttgat 23077790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 250
Target Start/End: Complemental strand, 17266415 - 17266216
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | |||||||||||| |||| |||||||||||||||||| ||   ||||||||| || || || ||||| |||||||||||||    
T  17266415 ggcctcctctcatcattaagtctctgcttacccttgtcagcaggggcactatacggtttaggacgactctgatgccctttacctcttcgctcactcatca 17266316  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| ||||||||||| || ||||| || || |||||||| |  |||||||| ||||| ||  |||| ||||  || || || |||||||||||||||||    
T  17266315 ccttataatgagctttggtgtcctcctcgtagatcctacagcgacttaccaaatcagagaaaattctaatctgttggtatcctatagccctcttgatgtc 17266216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 18 - 235
Target Start/End: Complemental strand, 21983291 - 21983074
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||| ||||||| ||||| || ||| |||||||||||||||| ||||| || |||| ||||||  |||| || |||||   |||||    
T  21983291 caaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttccctttgtcagcaggaacactgtagggcttcggacgac 21983192  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      || || || |||   || ||||||||||| | ||| ||||||||||| |||||||| |||||||| ||||| ||||| || ||||||||||| |||||    
T  21983191 cttgctgacctttgttcctccgctcactcataaacttataatgagctttcgtatcctcctcataaattctacagctgctcacaaattcagaaaattttct 21983092  T
Q  218 tatcttctgataaccaat 235  Q
     ||||| |||||||||||    
T  21983091 gatcttttgataaccaat 21983074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 20345532 - 20345768
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| ||||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| |||||||| |||||   |    
T  20345532 gtaacaaacaatctcagcaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactataaggcttagga 20345631  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||  |||||||| || || | ||||||||| | ||||||||||||||| || || || |||||||| || || ||  | ||||| |||||||||     
T  20345632 cgattctactgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcctcataaattctgcacctattaaccaactcagaaaaga 20345731  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| |||| |||||| |||||||| || ||||||||    
T  20345732 ctctgatctgctgatacccaatagctcttttgatgtc 20345768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 22505929 - 22506165
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||||   ||||||| || |||| |||||| ||||| || |||||   |    
T  22505929 gtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 22506028  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||| |||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||||| || || ||| | ||||| ||||| |||     
T  22506029 cgattctgctgtcccttacccctcctctcactcattatcttataatgagctttggtgtcttcttcataaattctgcacctgttaaccaactcagagaaga 22506128  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| || | |||||| |||||||| || ||||||||    
T  22506129 ctctgatttgctgatatccaatagctcttttgatgtc 22506165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 14884109 - 14883873
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| ||||  |||||||||||||||||||||||| | ||||||  ||  |||||||| || |||| || ||| ||||| || |||||   |    
T  14884109 gtaacaaacaatctcagctggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcctttgtcagtaggagcactgtaaggcttagga 14884010  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||     
T  14884009 cgattctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaaga 14883910  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| |||| |||||| ||||||||||| ||||||||    
T  14883909 ctctgatctgctgatacccaatagcccttttgatgtc 14883873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 19 - 223
Target Start/End: Original strand, 23669887 - 23670091
Alignment:
Q  19 aaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgact 118  Q
    ||||||| |||| |||||||||||||||||| || ||| |||||||||||||||| ||||  || |||| | |||| ||||| || |||||    ||||     
T  23669887 aaacaatctcagcaggagcatctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacaggagcactgtagggcttcggtcgacc 23669986  T
Q  119 ctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttctt 218  Q
     ||||| ||||||   || |||||| || |  |||| || |||||||| |||||||| || ||||||||||| ||||| |||||||||||||| ||||||    
T  23669987 ttgttgacccttgttcctccgctcattcctagccttatagtgagctttcgtatcctcctcgtaaatcctacagctgctcaccaattcagaaaaatttctt 23670086  T
Q  219 atctt 223  Q
    |||||    
T  23670087 atctt 23670091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 49 - 247
Target Start/End: Original strand, 23474497 - 23474695
Alignment:
Q  49 tgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcat 148  Q
    |||||||| |||||||||||||||| |||||||| || | |||||| ||| | || ||||||  |||||| || || ||||||||| | | |||| |||     
T  23474497 tgggcctcctctcatcattcaatctttgcttacccttatcagcaggagcaatgtaaggctttggacgactttgctgacccttgcctttcctctcattcac 23474596  T
Q  149 caccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
     |||||||||||||| || ||||| || ||||  || || || ||||| ||||| ||||||||||| |  |||||||| |||||||| |||| ||||||    
T  23474597 aaccttgtaatgagccttagtatcttcctcatgtattctgcagctgctcaccaactcagaaaagttacggatcttctggtaaccaattgcccgcttgat 23474695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 250
Target Start/End: Original strand, 25851342 - 25851558
Alignment:
Q  34 gagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcc 133  Q
    ||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || |||||   |||| |||| |||||||| ||    
T  25851342 gagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 25851441  T
Q  134 tctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 233  Q
     || | ||||||||| | ||||||||||||||| || || ||||||||||| || || ||  | ||||| ||||| ||   ||| |||| |||||| |||    
T  25851442 cctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctgcacctattaaccaactcagagaaaactctgatctgctgataccca 25851541  T
Q  234 atagccctcttgatgtc 250  Q
    ||||| || ||||||||    
T  25851542 atagctcttttgatgtc 25851558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 240
Target Start/End: Original strand, 43122740 - 43122943
Alignment:
Q  37 catctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctct 136  Q
    ||||||||||||| || ||| |||||||||||||||| ||||  || |||| | || | ||||| || |||||    |||   ||||| ||||||   ||    
T  43122740 catctctcctcttaggtctcctctcatcattcaatctttgctctcctttgtcaacatgagcactgtagggcttcggccgatcttgttgacccttgttcct 43122839  T
Q  137 acgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaata 236  Q
     |||||| || | ||||| || |||||||| |||||||| || ||||||||||| ||||| |||||||||||||| ||||||||||| || || |||||     
T  43122840 ccgctcattcctaaccttatagtgagctttcgtatcctcctcgtaaatcctacagctgctcaccaattcagaaaaatttcttatcttttggtacccaatg 43122939  T
Q  237 gccc 240  Q
    ||||    
T  43122940 gccc 43122943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 21561139 - 21560917
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||| ||||||| ||||| || ||| |||||||||||||||| || || || |||| |||||  ||||| || |||||   |||||    
T  21561139 caaacaatctcagcaggaacatctcttctcttaggtctcctctcatcattcaatctttgtttccctttgtcagcagtagcactgtagggcttcggacgac 21561040  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      || || || |||   || | ||||||||| ||||| ||| | ||||| |||||||| |||||||| ||||| ||||| ||||||| |||||| |  ||    
T  21561039 cttgctgacctttgttcctcctctcactcataaccttataacgggctttcgtatcctcctcataaattctacagctgctcaccaatttagaaaattacct 21560940  T
Q  218 tatcttctgataaccaatagccc 240  Q
     ||||| ||||||||||| ||||    
T  21560939 gatcttttgataaccaatggccc 21560917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 89 - 247
Target Start/End: Complemental strand, 21332032 - 21331874
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatccta 188  Q
    |||||| ||||| || ||||||  ||||||||| || || |||||| | | |||| |||  | | |||||||||| || |||||||| |||||||||||     
T  21332032 agcaggagcactgtaaggctttggacgactctgctgacctttgcctttcctctcattcacaatcctgtaatgagccttagtatcctcctcataaatcctg 21331933  T
Q  189 caactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||| ||||  |||||||| || |  |||||||| |||||||| |||| ||||||    
T  21331932 caactgctcaccagctcagaaaaattacggatcttctggtaaccaattgcccgcttgat 21331874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 144 - 250
Target Start/End: Original strand, 22465330 - 22465436
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctct 243  Q
    ||||||||||| |||||||| ||||||||||| |||||||| ||||| || || |||||||  || ||  || | ||||||||||| ||||| || ||||    
T  22465330 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattatgagaaaattatgatcttctgatatccaatggctctct 22465429  T
Q  244 tgatgtc 250  Q
    |||||||    
T  22465430 tgatgtc 22465436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 22329933 - 22329835
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||||||||| |||||    
T  22329933 agcaggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 22329835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 20770518 - 20770603
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 229  Q
    ||||||||||| || ||||| ||||||||||| |||||||| ||||| || || |||||||| || ||  |||| |||||||||||    
T  20770518 ctcatcaccttatagtgagcctttgtatcctcctcataaattctacagctcctcaccaattccgagaaaattctgatcttctgata 20770603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 229
Target Start/End: Original strand, 20779293 - 20779378
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 229  Q
    ||||||||||| || ||||| ||||||||||| |||||||| ||||| ||||| | |||||| || ||  |||| |||||||||||    
T  20779293 ctcatcaccttatagtgagcctttgtatcctcctcataaattctacagctgctcaacaattccgagaaaattctgatcttctgata 20779378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 140 - 229
Target Start/End: Complemental strand, 28891934 - 28891845
Alignment:
Q  140 ctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 229  Q
    |||||||||||||||||||||||| || |||||||| |||||||| || || |  || |||||||| || ||  |||| |||||||||||    
T  28891934 ctcactcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagcaactcaccaattctgagaaaattctgatcttctgata 28891845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 25429826 - 25429885
Alignment:
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 211  Q
    |||||||||||| || |||||||| ||||||||||| |||||||| ||||  ||||||||    
T  25429826 cttgtaatgagccttggtatcctcctcataaatcctgcaactgctcaccagctcagaaaa 25429885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 14996785 - 14996687
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||| ||| ||||| || |||||||||||||| |||||    
T  14996785 agcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactacctcgtagtgagccttcgtatcctcttcatagatcct 14996687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 16258150 - 16258092
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctg 76  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||| ||||||||||    
T  16258150 caaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 16258092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 187
Target Start/End: Original strand, 19773304 - 19773398
Alignment:
Q  93 ggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||||||||| |||||    
T  19773304 ggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 19773398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 22591869 - 22591811
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctg 76  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||| ||||||||||    
T  22591869 caaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 22591811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 22595424 - 22595366
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctg 76  Q
    |||||||| |||| |||| ||||||||||||| || ||| |||||||| ||||||||||    
T  22595424 caaacaatctcagcaggatcatctctcctcttaggtctcctctcatcagtcaatctctg 22595366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 27682446 - 27682348
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || ||||||||||| || |||||    
T  27682446 agcaggggcactgtacggcttaggacgactctgctgtcccttgccctttctctcattcactaccttgtagtgagccttcgtatcctcttcgtagatcct 27682348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 235
Target Start/End: Complemental strand, 21631381 - 21631296
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 235  Q
    ||||||||||||||||| ||||| || ||||| || || |||||||| |||| |||| |||| || |  ||||||||||| |||||    
T  21631381 accttgtaatgagctttcgtatcttcctcatagattctgcaactgctcaccagttcataaaatttacggatcttctgatatccaat 21631296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 89 - 178
Target Start/End: Original strand, 27613696 - 27613785
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttc 178  Q
    |||||||||||| ||||||||   |||||||||||||||||||||  | |  ||| |||  |||||||| ||||| || |||||||||||    
T  27613696 agcaggggcactgtacggcttaggacgactctgttgtcccttgcccttcctttcattcactaccttgtagtgagccttcgtatcctcttc 27613785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 244
Target Start/End: Original strand, 20824833 - 20824933
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctct 243  Q
    |||||||||||||||||||  || |||||||| || ||||| || || || || |||||||| || ||  |||| ||||||||||| ||||| || ||||    
T  20824833 ctcatcaccttgtaatgagtcttcgtatcctcctcgtaaattctgcagctactcaccaattctgagaaaattctgatcttctgatacccaatggctctct 20824932  T
Q  244 t 244  Q
    |    
T  20824933 t 20824933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 26735708 - 26735648
Alignment:
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    |||||||||||| || |||||||| |||||||| || |||||||| ||||  |||||||||    
T  26735708 cttgtaatgagccttagtatcctcctcataaattctgcaactgctcaccagctcagaaaag 26735648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0751 (Bit Score: 144; Significance: 8e-76; HSPs: 1)
Name: scaffold0751
Description:

Target: scaffold0751; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 5548 - 5778
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| |||| || ||||||||| ||||||||   | |    
T  5548 aacaaacaatatcagtaggagcatctctcctcttgg-cctcctctcatcattcaatctctgcttacccttgtcagtaggggcactgtacggcttccgatg 5646  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| ||||||||| ||||| ||||||||||||| |||||||||||||| |||||||||||||||||| |  | || ||||||||||||||||||||     
T  5647 actctgctgtcccttgactctatgctcactcatcactttgtaatgagctttggtatcctcttcataaatcttgtagctacttaccaattcagaaaagttc 5746  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||||||||||||||||||||||    
T  5747 cttatcttctgataaccaatagccctcttgat 5778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 8e-76; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 21928832 - 21929063
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||| ||| ||||||||||||||||||||| | |||||| ||||||||||||  ||||| || || |||| |||||| ||||||||||| ||   |||    
T  21928832 aacaaagaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctgttttcctttgtcagcaggagcactatacggtttaggacg 21928931  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| |||||||||||||||||||| |||    
T  21928932 actctgttgtcccttacctctacgctcactcatcaccttgtaatgagctttggtatcctcttcatagattctacagctgcttaccaattcagaaaaattt 21929031  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||||||||||||||||||||||    
T  21929032 cttatcttctgataaccaatagccctcttgat 21929063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 19985584 - 19985815
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||||| |||  ||||| ||||| ||||  ||||||||||||||||||||   |||    
T  19985584 aacaaacaatctcagtaggagcatctctcctcttaggcctcctctcatcaatcatcctctgtttacccttgtccgcaggggcactatacggcttcggacg 19985683  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| | ||||||||| || ||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||| |||    
T  19985684 actctgctatcccttgccactgcgctcactcatcaccttgtaatgagctttggtatcctcttcatatatcctacaactgcttaccaaatcagaaaaattt 19985783  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
     ||||||| ||||||||||| |||| ||||||    
T  19985784 attatcttttgataaccaatggcccgcttgat 19985815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 22027659 - 22027423
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| ||||||||||||||| ||||||||| |||||||||||||||| ||||| || |||| |||||||||||| ||||| ||   |    
T  22027659 gtaacaaactatctcagcaggagcatctctcctattgggcctcctctcatcattcaatctttgctttcccttgtcagcaggggcactgtacggtttagga 22027560  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| || || ||||||||||||||||| |||||| ||||||| ||||| ||||| ||||| ||||  |||||||| ||||| ||      
T  22027559 cgactctgctgtcccttaccacttcgctcactcatcaccttataatgatcttttgtgtcctcctcatagatcctgcaacgacttaccaaatcagagaaaa 22027460  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| ||||  ||||| || || || |||||||||||    
T  22027459 ttctaatctgttgataccctatggctctcttgatgtc 22027423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 223
Target Start/End: Original strand, 22374273 - 22374480
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||| ||||| |||||||||| |||||||||| | |||||| |||| ||||| | ||| || ||||| |||  |||||||||||||||||| ||   |||    
T  22374273 aacagacaatctcagtaggagaatctctcctcctaggcctcctctcctcattaagtctttgtttacctttgacagcaggggcactatacggtttcggacg 22374372  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||  |||||||| ||||| ||||||||||||||||| |||||||||||||||||||| | ||| |||||||| || || ||||| |||||||| ||     
T  22374373 actctactgtcccttacctctgcgctcactcatcaccttataatgagcttttgtatcctcctgatagatcctacagctactcaccaaatcagaaaaattc 22374472  T
Q  216 cttatctt 223  Q
    ||||||||    
T  22374473 cttatctt 22374480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 31413909 - 31413678
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||||||| |||  ||||||||||||||||||||||||| |||||||||||| ||||||||| || |||| ||||||||| || || || ||   |||    
T  31413909 aacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcattctctgctttcccttgtcagcaggggcgctgtaaggtttaggacg 31413810  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| |||||||| || || |||||||||||||  |||||||||||||| || || || ||||| ||||| || ||| ||||||| | ||| ||  ||    
T  31413809 actctgctgtcccttaccccttcgctcactcatcattttgtaatgagctttggtgtcttcctcatatatcctgcagctgtttaccaacttagagaaaatt 31413710  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
     | ||||||||||| |||||||| || |||||    
T  31413709 ttaatcttctgatacccaatagctcttttgat 31413678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 192
Target Start/End: Original strand, 22054267 - 22054443
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||| || |||| || |||||||||||| || |||||| |||||||||| | |||||||||||| || | |||||||||||| ||||||||   |||    
T  22054267 aacaaactatctcagcagaagcatctctcctattcggcctcctctcatcattaagtctctgcttacccttatcagcaggggcactgtacggcttaggacg 22054366  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaac 192  Q
    ||||||  ||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||| | ||||| ||||    
T  22054367 actctgccgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcctcctcacagatcctgcaac 22054443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 29300803 - 29300569
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||||||| ||||  ||| |||||| ||||||||||||| | ||||||||||   ||||||| || |||| |||||| ||||| || || ||   |||    
T  29300803 aacaaacaatttcagcgggaacatctcccctcttgggcctcctatcatcattcatcttctgcttccctttgtcagcaggagcactgtaaggtttaggacg 29300704  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||  |||||||| || || | ||||||||| |||||||||||||||||||| ||||| ||||| ||||| || |||||||| || ||||| ||   |    
T  29300703 actctaatgtcccttacccctcctctcactcattaccttgtaatgagcttttgtgtcctcctcatatatcctgcagctgcttactaactcagagaaaact 29300604  T
Q  216 cttatcttctgataaccaatagccctcttgatgtc 250  Q
    || ||||||||||| |||||||| || ||||||||    
T  29300603 ctaatcttctgatacccaatagctcttttgatgtc 29300569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 16268603 - 16268367
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| ||||||||||||| |||| |||||| | |||||| |||   ||||||| || |||| |||| | ||||| || |||||   |    
T  16268603 gtaacaaacaatctcagaaggagcatctctcttcttaggcctcctgtcatcactcatcttctgctttcctttgtcagcaagagcactgtaaggcttagga 16268504  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| ||||||||||||| || || | ||||||||| |  |||||||||||||| || || ||||||||||| ||||||||  | ||||| ||||| |||     
T  16268503 cgattctgttgtcccttacccctcctctcactcattatattgtaatgagctttggtgtcttcttcataaattctacaactattaaccaactcagagaaga 16268404  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| |||| |||||| ||||||||||| ||||||||    
T  16268403 ctctgatctgctgatacccaatagcccttttgatgtc 16268367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 28984313 - 28984549
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||   |||||||||||||||||||||||| | ||||||  ||  |||||||| || ||||  ||||| ||||| || |||||   |    
T  28984313 gtaacaaacaatctcaactggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcccttgtccgcaggagcactgtaaggcttagga 28984412  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| ||||||||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||||||||| ||| | ||||| |||||||||     
T  28984413 cgattctgttgtcccttacccctcctctcactcataatcttgtaatgagctttggtgtcttcttcataaatcctacacctgttaaccaactcagaaaaga 28984512  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| ||||  ||||| ||||| || || ||||||||    
T  28984513 ctctgatctgttgatatccaatggctcttttgatgtc 28984549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 18 - 240
Target Start/End: Original strand, 20391492 - 20391714
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||| ||||||| ||||| || ||| |||||||||||||||| || || || |||| |||||| ||||| || |||||   |||||    
T  20391492 caaacaatctcagaaggaacatctctactcttaggtctcctctcatcattcaatctttgtttccctttgtcagcaggagcactgtagggcttcggacgac 20391591  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      || || || |||   || ||||||||||| ||||| ||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||| |  ||    
T  20391592 cttgctgacctttgttcctccgctcactcataaccttataatgagctttggtatcctcttcataaattctacagctgctcaccaattcagaaaattgcct 20391691  T
Q  218 tatcttctgataaccaatagccc 240  Q
     ||||| ||||| ||||| ||||    
T  20391692 gatcttttgatacccaatggccc 20391714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 151 - 250
Target Start/End: Complemental strand, 21970793 - 21970694
Alignment:
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| ||||| ||||| ||||| || |||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||| || |||||||||||    
T  21970793 ccttataatgggctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataaccaatggctctcttgatgtc 21970694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 151 - 249
Target Start/End: Complemental strand, 22004323 - 22004225
Alignment:
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgt 249  Q
    |||| ||||||||||| ||||| ||||||||||||||||| || || ||||| | |||||||||| | ||||||||||||||||| || ||||||||||    
T  22004323 ccttataatgagctttggtatcatcttcataaatcctacagctactcaccaacttagaaaagtttataatcttctgataaccaatggctctcttgatgt 22004225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 235
Target Start/End: Original strand, 22523930 - 22524133
Alignment:
Q  32 aggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttg 131  Q
    |||||||||| || || | |||| | |||||||||| | ||| || || || || | |||||||||||| || ||||||  ||||||||| || || |||    
T  22523930 aggagcatctttcttcctaggccgcctctcatcattaactctttgttttcccttatcagcaggggcactgtaaggctttggacgactctgctgacctttg 22524029  T
Q  132 cctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataac 231  Q
    ||| | |||||| |||  | |||||||||||| || |||||||| | ||||||||| |||||||| ||||  || |||||||| |  |||||||| ||||    
T  22524030 ccttttcgctcattcacaatcttgtaatgagccttagtatcctccttataaatcctgcaactgctcaccagctcggaaaagttacggatcttctggtaac 22524129  T
Q  232 caat 235  Q
    ||||    
T  22524130 caat 22524133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 211
Target Start/End: Complemental strand, 6606844 - 6606651
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| ||||||||| ||||||| ||||| || ||| |||||||||||||||| ||||  ||  ||| |  |||  |||| || |||||   ||| |    
T  6606844 caaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgctctcctctgtcaataggaacactgtagggcttcggacgtc 6606745  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 211  Q
      || || ||||||   || ||||||||| | ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||||||||||    
T  6606744 cttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacaactactcaccaattcagaaaa 6606651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 247
Target Start/End: Complemental strand, 22421228 - 22421039
Alignment:
Q  58 tctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 157  Q
    ||||||||  || |||||| || || || |||||||| ||||| || ||||||  ||||||||| || || ||| || | |||||| |||  | ||||||    
T  22421228 tctcatcaaccattctctgtttgcccttattagcaggagcactgtaaggctttggacgactctgctgacctttgactttccgctcattcacaatcttgta 22421129  T
Q  158 atgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||| || |||||||| ||||||||||| |||||||| |||   |  |||||||| |  |||||||| |||||||| |||| ||||||    
T  22421128 atgagccttagtatcctcctcataaatcctgcaactgctcacctggttggaaaagttacggatcttctggtaaccaattgcccgcttgat 22421039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 71 - 247
Target Start/End: Original strand, 21671974 - 21672150
Alignment:
Q  71 tctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgta 170  Q
    |||||| ||||| || | |||||| ||||| || |||||   ||||||||| || |||||| |  | |||||| |||  | |||||||||||  || | |    
T  21671974 tctctgtttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacccttggcctttcgctcattcacaatcttgtaatgagtcttggca 21672073  T
Q  171 tcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    ||||| ||||||||||| |||||||| ||||  |||||||||  ||  |||||||| |||||||| |||||||||||    
T  21672074 tcctcctcataaatcctgcaactgctcaccagctcagaaaagactcggatcttctggtaaccaattgccctcttgat 21672150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 235
Target Start/End: Original strand, 22990522 - 22990668
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatccta 188  Q
    |||||| ||||| || ||||||  |||||| || || || |||||| | |||||| |||  | |||||||||||| || ||||| || |||||||||||     
T  22990522 agcaggagcactgtaaggctttggacgactttgctgacctttgcctttccgctcattcacaatcttgtaatgagccttagtatcttcctcataaatcctg 22990621  T
Q  189 caactgcttaccaattcagaaaagtttcttatcttctgataaccaat 235  Q
    |||||||| ||||  |||||||| || |  |||||||| ||||||||    
T  22990622 caactgctcaccagctcagaaaaattacggatcttctggtaaccaat 22990668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 190
Target Start/End: Original strand, 18860055 - 18860152
Alignment:
Q  93 ggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctaca 190  Q
    |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||||||||| ||||||||    
T  18860055 ggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcctaca 18860152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 249
Target Start/End: Complemental strand, 21982196 - 21982098
Alignment:
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgt 249  Q
    |||| ||||| ||||| ||||| || ||||||||||| || || || ||||| | | |||||||| | ||||||||||||||||| ||  |||||||||    
T  21982196 ccttataatgggctttggtatcatcctcataaatccttcagctactcaccaaattaaaaaagtttataatcttctgataaccaatggctttcttgatgt 21982098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 151 - 249
Target Start/End: Complemental strand, 21998682 - 21998584
Alignment:
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgt 249  Q
    |||| ||||| ||||| ||||| || |||||||| || || || || ||||| ||| |||||||| | ||||||||||||||||| ||  |||||||||    
T  21998682 ccttataatgggctttggtatcatcctcataaattcttcagctactcaccaactcaaaaaagtttataatcttctgataaccaatggctttcttgatgt 21998584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 93 - 187
Target Start/End: Complemental strand, 22126262 - 22126168
Alignment:
Q  93 ggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||||||||||| |||||    
T  22126262 ggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 22126168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 3274646 - 3274707
Alignment:
Q  153 ttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    |||||||||||| |||||||||| ||||| || || || ||||| |||| ||||||||||||    
T  3274646 ttgtaatgagctcttgtatcctcctcatagattctgcagctgctcaccagttcagaaaagtt 3274707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 142; Significance: 1e-74; HSPs: 4)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 29993 - 30222
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||| || ||||||||| |||||||||||||||||||| |||||||||| || ||||||||||| |||| |||||| ||||||||||||||   |||||    
T  29993 caaactatgtcagtaggaacatctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcactatacggcttcggacgac 30092  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  30093 tctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagctgcttaccaaatcagagaagtttct 30192  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    ||| |||||||||||||| || ||||||||    
T  30193 tattttctgataaccaatggctctcttgat 30222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #2
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 49119 - 48883
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| ||||||||| ||||| || |||||| | |||||||||| ||||||||| || |||| ||| |||||||||||||| ||   |    
T  49119 gtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttagga 49020  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||  ||||| ||||| ||||| ||||  |||||||| ||||| ||      
T  49019 cgactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgagtcctcctcatatatcctgcaacgacttaccaaatcagagaaaa 48920  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| |||| |||||| || || || |||||||||||    
T  48919 ttctaatctgctgataccctatggctctcttgatgtc 48883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #3
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 58153 - 57917
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| ||||||||| ||||| || |||||| | |||||||||| ||||||||| || |||| ||| |||||||||||||| ||   |    
T  58153 gtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttagga 58054  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||  ||||| ||||| ||||| ||||  |||||||| ||||| ||      
T  58053 cgactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgagtcctcctcatatatcctgcaacgacttaccaaatcagagaaaa 57954  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| |||| |||||| || || || |||||||||||    
T  57953 ttctaatctgctgataccctatggctctcttgatgtc 57917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067; HSP #4
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 64541 - 64305
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| ||||||||| ||||| || |||||| | |||||||||| ||||||||| || |||| ||| |||||||||||||| ||   |    
T  64541 gtaacaaactatctcagcaggagcatccctcctattcggcctcctttcatcattcagtctctgctttcccttgtcagccggggcactatacggtttagga 64442  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||  ||||| ||||| ||||| ||||  |||||||| ||||| ||      
T  64441 cgactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgagtcctcctcatatatcctgcaacgacttaccaaatcagagaaaa 64342  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| ||||  ||||| || || || |||||||||||    
T  64341 ttctaatctgttgataccctatggctctcttgatgtc 64305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 142; Significance: 1e-74; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 4388 - 4160
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| || ||||||||||| |||| |||||| ||| | ||||||||   |||||    
T  4388 caaacaatatcagtaggagcatctctcctcttgggcctcctctcatcatttaaactctgcttacccttgtcagcaggagcagtgtacggcttcggacgac 4289  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||||||||||||||||||||| |||||||||||||||||||||| ||| |||||||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  4288 tctgttgtcccttgcctctacgttcactcatcaccttgtaatgag-tttcgtatcctcctcataaatcctacagctgcttaccaaatcagagaagtttct 4190  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    ||| |||||||||||||| || ||||||||    
T  4189 tattttctgataaccaatggctctcttgat 4160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1433 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold1433
Description:

Target: scaffold1433; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 27 - 247
Target Start/End: Complemental strand, 1237 - 1017
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtc 126  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||| |||| |||||| ||||| || |||||   ||||||||||||||    
T  1237 tcagtaggagcatctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtc 1138  T
Q  127 ccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 226  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| |||      
T  1137 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcatagatcctacagctgcttaccaaatcagagaagtttcttattttcga 1038  T
Q  227 ataaccaatagccctcttgat 247  Q
    |||||||||||||||||||||    
T  1037 ataaccaatagccctcttgat 1017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0404 (Bit Score: 141; Significance: 5e-74; HSPs: 1)
Name: scaffold0404
Description:

Target: scaffold0404; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 8122 - 8342
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtc 126  Q
    |||||||||||||||||||||||||||||| ||||||||||||  ||||| ||||| |||| |||||| ||||| || |||||   ||||||||||||||    
T  8122 tcagtaggagcatctctcctcttgggcctcctctcatcattcagcctctgtttacccttgtcagcaggagcactgtatggcttcggacgactctgttgtc 8221  T
Q  127 ccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 226  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| ||||||||||| ||||| ||||||||||| |||      
T  8222 ccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcatagatcctacagctgcttaccaaatcagagaagtttcttattttcga 8321  T
Q  227 ataaccaatagccctcttgat 247  Q
    |||||||||||||||||||||    
T  8322 ataaccaatagccctcttgat 8342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 140; Significance: 2e-73; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 115991 - 116222
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||||||||||||||||||||| |||||||| |||||| |||||||||||| ||||| |||||| |||| |||||| ||||||||||||||   |||    
T  115991 aacaaacaatatcagtaggagcatccctcctcttaggcctcctctcatcattcagtctcttcttacccttgtcagcaggagcactatacggcttcggacg 116090  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||   ||| |||||| | |||||||| ||||||||||| ||||| || |||    
T  116091 actctgctgtcccttgcctctacgctcactcatcaccttgtaatgagctttcaaatcttcttcacagatcctacagctgcttaccaaatcagagaaattt 116190  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    ||||| ||||||||||||||||||||||||||    
T  116191 cttattttctgataaccaatagccctcttgat 116222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 138; Significance: 3e-72; HSPs: 2)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 70477 - 70706
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||  ||||| ||||| |||| |||||| ||||||||||| ||   |||||    
T  70477 caaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggtttcggacgac 70576  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| ||||| |||||||||||||| || ||||||||||| |||||||||||||| || ||||| |||||||||||||||||||| |||||    
T  70577 tctgttgtcccttacctctgcgctcactcatcactttataatgagctttggtatcctcttcatagattctacagctgcttaccaattcagaaaaatttct 70676  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||||||||||||||||||||    
T  70677 tatcttctgataaccaatagccctcttgat 70706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 433 - 527
Alignment:
Q  153 ttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||| ||||| |||||| ||||||| || || |||||||| || | ||||| |||||| |  ||||||||||| ||||| |||| ||||||    
T  433 ttgtaatgtgctttggtatccacttcatagattctgcaactgctcactagttcagtaaagttacagatcttctgatatccaattgcccgcttgat 527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 137; Significance: 1e-71; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 43076 - 43296
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtc 126  Q
    ||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||| |||| |||||||||||||||||||||   ||||||||  ||||    
T  43076 tcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacccttgtcagcaggggcactatacggcttcggacgactctactgtc 43175  T
Q  127 ccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 226  Q
    |||||||||  |||| ||||||||||||||||||||||||||||||||| ||||| ||| |||| ||||||||||| ||||| ||||||||||| |||||    
T  43176 ccttgcctcggcgcttactcatcaccttgtaatgagcttttgtatcctcatcatagatcttacagctgcttaccaaatcagagaagtttcttattttctg 43275  T
Q  227 ataaccaatagccctcttgat 247  Q
    |||||||||||||||||||||    
T  43276 ataaccaatagccctcttgat 43296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 134; Significance: 8e-70; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 4239 - 4010
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||| ||| ||||||||||||||||||||||| |||||| ||||||||||||| ||||| ||||| |||| |||||| ||||||||||| ||   |||||    
T  4239 caaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcaacctctgtttacctttgtcagcaggagcactatacggtttcggacgac 4140  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||  |||||||| ||||| |||||||||||||| || |||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||    
T  4139 tctactgtcccttacctctgcgctcactcatcactttataatgagcttttgtatcctcttcatagatcctacaactacttaccaattcagaaaagttcct 4040  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    |||||| ||||||||||||||||| |||||    
T  4039 tatcttttgataaccaatagcccttttgat 4010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 17004 - 17235
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||| ||| ||||||||||||||||||||||| |||||| |||||||||||| | |||||||||| ||||  ||||| ||||||||||||||   |||    
T  17004 aacaaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtttctgcttacccttgtcggcaggagcactatacggcttcggacg 17103  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||||| || ||||| |||||||||||||||||||| ||     
T  17104 actctgttgtcccttgcctttgcgctcactcatcaccttgtaatgagctttggtattctcttcatatattctacatctgcttaccaattcagaaaaattc 17203  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    |||||||  ||||| |||||||||||||||||    
T  17204 cttatctattgatagccaatagccctcttgat 17235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 130; Significance: 2e-67; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 22015749 - 22015520
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||||||||  ||||||||||||||| |||| |||||| |||||||||| | ||||| |||||| |||| |||||| ||||||||||||||   |||||    
T  22015749 caaacaatatttgtaggagcatctctcttctttggcctcctctcatcatttattctcttcttacccttgtcagcaggagcactatacggcttcggacgac 22015650  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| || |||||||||||||||||||||||||||||||| ||| | |||||||| |||||||| ||||||||||| ||||| ||||||||    
T  22015649 tctgctgtccctttcccctacgctcactcatcaccttgtaatgagctttcgtaacttcttcatagatcctacagctgcttaccaaatcagagaagtttct 22015550  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    ||| ||||||||||||||||||||||||||    
T  22015549 tattttctgataaccaatagccctcttgat 22015520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 21739040 - 21738811
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||| ||| |||||||||||| |||||||||| |||||| ||||||||||||||||||||||||| |||| |||| |||| ||||| |||||   |||||    
T  21739040 caaataatctcagtaggagcacctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcatgggcgctatatggcttcggacgac 21738941  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| ||||| || |||||||||||||||||||||||||| |||||||||||||| ||||| || || ||||||||||||||||| || ||    
T  21738940 tctgttgtcccttacctctgcggtcactcatcaccttgtaatgagctttcgtatcctcttcatatatcctgcagctacttaccaattcagaaaaattcct 21738841  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    || ||| ||||| |||||||||||||||||    
T  21738840 taccttttgatagccaatagccctcttgat 21738811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 19857660 - 19857892
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| || |||| ||||||||||||||| |||||| ||||||||||||| ||||||||||| |||| |||||| |||||||| || ||   |||||    
T  19857660 caaacaatctcggtagaagcatctctcctcttaggcctcctctcatcattcaacctctgcttacccttgtcagcaggagcactatatggtttaggacgac 19857759  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||| || |||||||||||||| ||| |||| ||||||||||| ||||||||||||||    
T  19857760 tctgttgtcccttacctctgcgttcactcatcaccttgtaatgagccttagtatcctcttcatagatcttacagctgcttaccaactcagaaaagtttct 19857859  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||||||||| ||||| || |||||||||||    
T  19857860 aatcttctgatagccaatggctctcttgatgtc 19857892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 21742556 - 21742327
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||||||| |||||||||||| |||| || ||| ||||||||||| ||   |||||    
T  21742556 caaataatctcagtaggagcatctctcctcttaggcctcctctcatcattcagtctctgcttacccttgtcagtaggagcactatacggtttcggacgac 21742457  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||  |||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| ||||| || || || ||||| ||||| ||  ||||    
T  21742456 tctactgtcccttacctctgcgctcactcatcaccttgtaatgagctttcgtatcctcttcatatatcctgcagctactcaccaactcagagaaaattct 21742357  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    |||||||| |||||||||||||||||||||    
T  21742356 tatcttctcataaccaatagccctcttgat 21742327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 20832904 - 20832673
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggctttta--acg 115  Q
    ||||||||||||  ||||||||||||||||||||| ||| ||||||||||||  |||||||| || |||| |||||| |||||||| |   ||||  |||    
T  20832904 caaacaatatcaacaggagcatctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatatg---tttaggacg 20832808  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||| | |||||| || ||||| ||||| ||||| |  |||||||||    
T  20832807 actctgctgtcccttgcctctacggtcactcatcaccttgtaatgagctttcgtatcttattcatagattctacagctgctcaccaacttcgaaaagttt 20832708  T
Q  216 cttatcttctgataaccaatagccctcttgatgtc 250  Q
    || || ||||| || ||||||||||||||||||||    
T  20832707 ctaattttctggtatccaatagccctcttgatgtc 20832673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 24096621 - 24096390
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||||||| |||  ||||||||||||||||||||||||| ||||||||||||  ||||| || || |||| |||||| |||||||| || ||   |||    
T  24096621 aacaaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcagcaggagcactataaggtttaggacg 24096522  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    ||||||||||||||| | ||| ||||||||| ||||||||||||||||||| || || || ||||| ||||| || ||||| ||||| ||||| ||  ||    
T  24096521 actctgttgtcccttacttcttcgctcactcgtcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgctcaccaactcagagaaaatt 24096422  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    || ||||||||||| |||||||| || |||||    
T  24096421 ctaatcttctgatacccaatagctcttttgat 24096390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 31537004 - 31536769
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    ||||||||||| |||| ||||||||||||||||||||| ||| | ||||||||||  |||||||| || |||| |||||| |||||||| |||||   ||    
T  31537004 taacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcctctgctttcctttgtcagcaggagcactataaggcttaggac 31536905  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    || |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| ||||| ||| ||||||| ||||| |||      
T  31536904 gattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacatctgtttaccaactcagagaagac 31536805  T
Q  215 tcttatcttctgataaccaatagccctcttgatgtc 250  Q
    ||| |||| |||||| |||||||| || ||||||||    
T  31536804 tctgatctgctgatacccaatagctcttttgatgtc 31536769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 21961409 - 21961631
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| ||||||||||||||||||||| ||| | ||||||||||   ||||||| || |||| || ||| ||||| || |||||   |    
T  21961409 gtaacaaacaatctcagaaggagcatctctcctcttgggtctcctatcatcattcatcttctgctttcctttgtcagaaggagcactgtaaggcttagga 21961508  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||| |||||||| ||||| | ||||||||| | ||||||||||||||| || || |||||||||||  | || ||| ||||||||||||| |||     
T  21961509 cgattctgctgtcccttacctctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattatgcatctgtttaccaattcagagaaga 21961608  T
Q  214 ttcttatcttctgataaccaata 236  Q
     ||| |||| |||||| ||||||    
T  21961609 ctctgatctgctgatacccaata 21961631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 38909830 - 38909598
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||  |||||||| || |||| |||||| ||||| || || ||   ||||     
T  38909830 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcctctgctttcctttgtcagcaggagcactgtaaggtttaggacgat 38909731  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | | ||||||| | ||||||||||||||| || || ||||||||||| ||||| ||| ||||||| ||||| |||  |||    
T  38909730 tctgttgtcccttacccctcctcccactcattatcttgtaatgagctttggtgtcttcttcataaattctacatctgtttaccaactcagagaagactct 38909631  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  38909630 gatctgctgatacccaatagctcttttgatgtc 38909598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 52989123 - 52989358
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||||   ||||||| || |||| |||||| ||||| || |||||   |    
T  52989123 gtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 52989222  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| | || |||||||| || || | ||||||||| |  |||||||||||||| || || ||||||||||| ||||| ||| | ||||| ||||| |||     
T  52989223 cgattttgctgtcccttacccctcctctcactcatta-tttgtaatgagctttggtgtcttcttcataaattctacacctgttaaccaactcagagaaga 52989321  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| |||| |||||| |||||||| || ||||||||    
T  52989322 ctctgatctgctgatacccaatagctcttttgatgtc 52989358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 51 - 244
Target Start/End: Original strand, 16379482 - 16379675
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | |||||| || || || | ||||| |||||| || |||||   |||||||||||| ||||||||| | |||||| |||  |    
T  16379482 ggcctcctctcatcattaactctctgtttgcccttatcagcagaggcactgtaaggcttaggacgactctgttgacccttgcctttccgctcattcacaa 16379581  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctctt 244  Q
    ||||||||||||| || |||||||| ||||||||||| || ||||| ||||  |||||||| || |  |||||||  |||||||| ||||||||    
T  16379582 ccttgtaatgagccttagtatcctcctcataaatcctgcatctgctcaccagctcagaaaaattacggatcttctagtaaccaattgccctctt 16379675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 18273149 - 18273346
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| ||||||||| ||||||| ||||| || ||| |||||||||||||||| ||||  || |||| | |||| ||||| || |||||   |    
T  18273149 gtaacaaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgctcccctttgtcaacaggagcactgtagggcttcgga 18273248  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 211  Q
    ||||  || || ||||||   || ||||||||| | ||||| |||||||| || |||||||| |||||||| ||||| || || ||||||||||||||    
T  18273249 cgaccttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacagctactcaccaattcagaaaa 18273346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 20297765 - 20297962
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| ||||||||||||||||||||||||| | ||||||  ||   |||| || || |||| || ||| ||||| || |||||   |    
T  20297765 gtaacaaacaatctcagcaggagcatctctcctcttgggcctcctgtcatcacccatcttctgttttcccttgtcagtaggagcactgtaaggcttagga 20297864  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 211  Q
    ||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| ||||| ||| | ||||| ||||||||    
T  20297865 cgattctgatgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacacctgttaaccaactcagaaaa 20297962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 48426259 - 48426491
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || |||||   ||||     
T  48426259 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 48426358  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  48426359 tctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 48426458  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  48426459 gatctgctgatacccaatagctcttttgatgtc 48426491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 20074717 - 20074481
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||| ||||| ||||| |||||||||||||||||  ||||| | |||||| |||   ||||||| || |||| |||||  ||||| || |||||   |    
T  20074717 gtaacacacaatctcagtgggagcatctctcctcttaagcctcctgtcatcactcatcttctgctttcctttgtcagcagaagcactgtaaggcttagga 20074618  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| |||||  || | ||||| ||||| |||     
T  20074617 cgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacacatgttaaccaactcagagaaga 20074518  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| |||| || ||| |||||||| || ||||||||    
T  20074517 atctgatctgctaatacccaatagctcttttgatgtc 20074481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 20853638 - 20853532
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctct 243  Q
    ||||||||||| |||||||| ||||||||||| |||||||| ||||| || || |||||||| || ||  |||| ||||||||||| ||||| || ||||    
T  20853638 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattctgagaaaattctgatcttctgatatccaatggctctct 20853539  T
Q  244 tgatgtc 250  Q
    |||||||    
T  20853538 tgatgtc 20853532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 37680435 - 37680667
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||| ||||||||||||||||||| | ||||||  ||   ||||||| || |||| || ||| ||||| || |||||   ||||     
T  37680435 caaacaatctcaacaggagtatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagtaggagcactgtaaggcttaggacgat 37680534  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | ||||||||| | ||||||||||||||| || || |||||||| || || || ||  | ||||| ||| | |||  |||    
T  37680535 tctgttgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcatagattctgcacctattaaccaactcaaagaagactct 37680634  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  37680635 gatctgctgatacccaatagctcttttgatgtc 37680667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 20921929 - 20922023
Alignment:
Q  153 ttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||| ||||| |||||||||||||| || || |||||||| || | ||||| |||||| |  ||||||||||| ||||| |||| ||||||    
T  20921929 ttgtaatgtgctttggtatcctcttcatagattctgcaactgctcactagttcagtaaagttacggatcttctgatatccaattgcccgcttgat 20922023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 235
Target Start/End: Complemental strand, 21045118 - 21044941
Alignment:
Q  58 tctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 157  Q
    |||||||||| | ||| ||||| || || | |||||| ||||| || ||||||  |||||| || || ||||||||| | | || | |||  ||||||||    
T  21045118 tctcatcattaactctttgcttgcccttatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctcttattcacaaccttgta 21045019  T
Q  158 atgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 235  Q
    |||||| || ||||| || ||||| || || |||||||| ||||  ||||||||||| |  |||||||| ||||||||    
T  21045018 atgagccttagtatcttcctcatatattctgcaactgctcaccagctcagaaaagttacggatcttctgttaaccaat 21044941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 16347547 - 16347433
Alignment:
Q  73 tctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatc 172  Q
    |||| ||||| |||| ||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||    
T  16347547 tctgtttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatc 16347448  T
Q  173 ctcttcataaatcct 187  Q
    |||||| || |||||    
T  16347447 ctcttcgtagatcct 16347433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 73 - 187
Target Start/End: Complemental strand, 16354195 - 16354081
Alignment:
Q  73 tctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatc 172  Q
    |||| ||||| |||| ||| |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || |||||    
T  16354195 tctgtttacccttgtcagcgggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatc 16354096  T
Q  173 ctcttcataaatcct 187  Q
    |||||| || |||||    
T  16354095 ctcttcgtagatcct 16354081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 51330428 - 51330330
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||||||||   ||||||||| |||||||| ||  | | |||| |||  |||||||| ||||| || |||||||||||||| |||||    
T  51330428 agcaggggcactgtacggcttaggacgactctgctgtcccttacccttcctctcattcactaccttgtagtgagccttcgtatcctcttcatagatcct 51330330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Original strand, 19109793 - 19109837
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcc 133  Q
    |||||||||||| ||||||||   |||||||||||||||||||||    
T  19109793 agcaggggcactgtacggcttaggacgactctgttgtcccttgcc 19109837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 247
Target Start/End: Original strand, 22117102 - 22117298
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | ||| || || || || | ||||||  |||| || ||||||  |||||| || || ||||||||| | | |||| |||  |    
T  22117102 ggcctcctctcatcattaactctttgttttcccttatcagcaggaacactgtaaggctttggacgactttgctgacccttgcctttcctctcattcaaaa 22117201  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||| || ||||| || || || || || |||||||| ||||  ||||||||||| |  |||||||  |||||||| |||| ||||||    
T  22117202 ccttgtaatgagccttagtatcttcctcgtatattctgcaactgctcaccagctcagaaaagttacggatcttcttgtaaccaattgcccgcttgat 22117298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 128; Significance: 3e-66; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 247
Target Start/End: Original strand, 34704 - 34935
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||| || || |||||||| |||| |||||| ||||||||| ||||   |||    
T  34704 aacaaacaatgtcagtaggagcatctctcctcttgggcctcctctcatcatttaacctttgcttacccttgtcagcaggagcactatacagcttcggacg 34803  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| |||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||||||||| || || |||||||| ||||| ||||||    
T  34804 actctgctgtcccttgcctctgcgttcactcatcaccttgtaatgagcttttgtgtcctcctcataaatcctgcagctacttaccaaatcagagaagttt 34903  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    ||||| |||| ||||||||| || ||||||||    
T  34904 cttattttctaataaccaatggcactcttgat 34935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 63456 - 63245
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||| |||||||                        
T  63456 aacaaacaatatcagtaggagcatctctcctcttgggcctcctctcatcattcaatctttgcttacccttgtcagcaggg-------------------- 63377  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||    
T  63376 actctgctgtaccttgcctctacgctcactcatcaccttgtaatgagctttcgtatcctcttcataaatcctacagctacttaccaattcagaaaagttt 63277  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    |||||||||| |||||||||||||||||||||    
T  63276 cttatcttctcataaccaatagccctcttgat 63245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 37308 - 37540
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||| ||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| ||||  ||| | ||||||||||||||   |||||    
T  37308 caaaaaatatcagtaggagtgtctctcctcttgggcctcctctcatcattcaatctctgcttacccttgtcggcaagagcactatacggcttcggacgac 37407  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| |||||||| |||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||||| ||  ||| ||||||||||    
T  37408 tctgctgtcccttacctctacgttcactcatcaccttgtaatgagctttcgtatcttcttcatagatcctacagctgcttaacagctcataaaagtttct 37507  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     || |||||||| |||||||| |||||||||||    
T  37508 aattttctgatatccaatagctctcttgatgtc 37540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 125; Significance: 2e-64; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 153861 - 154093
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| ||||| |||||||||||||||||||||||| |||||||||||| || ||||||||| |||| |||||| |||||||| |||||   |||||    
T  153861 caaacaatctcagtgggagcatctctcctcttgggcctcctctcatcattcagtcgctgcttacccttgtcagcaggagcactatatggcttcggacgac 153960  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| |||||  | |||| ||||||||||||||||||||| || ||||| |||||||||||||| ||||||||||| ||||| ||||||||    
T  153961 tctgctgtcccttacctctttgttcacccatcaccttgtaatgagctttcgtctcctcctcataaatcctacagctgcttaccaactcagagaagtttct 154060  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||||||||||||||| || |||||||||||    
T  154061 aatcttctgataaccaatggctctcttgatgtc 154093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 124; Significance: 7e-64; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 18797891 - 18798126
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    ||||||||||||||   ||||||||| ||||||||||||||| |||||||||||||||| ||||| || |||| |||||| ||||||||||||||   ||    
T  18797891 taacaaacaatatccacaggagcatccctcctcttgggcctcctctcatcattcaatctttgctttcccttgtcagcaggagcactatacggcttcggac 18797990  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    ||||||| |||||||||||||| || ||||||||||||||||||||||||| ||| ||||||||||| || || || || |||||||| ||||| |||||    
T  18797991 gactctgctgtcccttgcctctgcggtcactcatcaccttgtaatgagcttctgtgtcctcttcatagattctgcagctacttaccaactcagagaagtt 18798090  T
Q  215 tcttatcttctgataaccaatagccctcttgatgtc 250  Q
    ||| |||||||| || ||||||||||||||||||||    
T  18798091 tctgatcttctggtatccaatagccctcttgatgtc 18798126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 25771046 - 25771270
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||| ||||| ||||||||||||||||||||||| |||||| ||||||||||||  ||||| ||||| |||| |||||| ||||||||||| |    |||    
T  25771046 aacagacaatctcagtaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacggttacggacg 25771145  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    ||||||||||||||| ||||| ||||||||||||||  | ||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||     
T  25771146 actctgttgtcccttacctctgcgctcactcatcactctataatgagcttttgtatcctcttcataaatcctacagctgcttaccaactcagaaaaattc 25771245  T
Q  216 cttatcttctgataaccaatagccc 240  Q
    |||||||| || || ||||||||||    
T  25771246 cttatcttttggtagccaatagccc 25771270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 19438202 - 19438438
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||| ||| || |||| ||||||||||||||||||||||||| |||||||||| || ||||||||||| |||| |||||| |||||||| |||||   |    
T  19438202 gtaacgaacgatctcagcaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcactatatggcttcgga 19438301  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| ||||| |  |||||||  |||||||||| ||| || |||||||||||||| |||||||| ||||||||||| ||||||||||    
T  19438302 cgactctgctgtcccttacctctcctttcactcactaccttgtaataagccttcgtatcctcttcatagatcctacagctgcttaccaactcagaaaagt 19438401  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| ||||||||||| ||||| || |||||||||||    
T  19438402 ttctgatcttctgatacccaatggctctcttgatgtc 19438438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 21567068 - 21566839
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||| || |||| ||||||||||||||||||||||||  |||||||||||| ||  ||||| || |||| |||||||||||| ||||||||   |||||    
T  21567068 caaactatttcagcaggagcatctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgac 21566969  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| |  || ||||||||||||||||||||||||||||||| ||| || ||||| || ||||| ||||||||||| ||||||||  | ||    
T  21566968 tctgttgtcccttactcctccgctcactcatcaccttgtaatgagcttttgaatcttcctcatagattctacagctgcttaccaactcagaaaaagtcct 21566869  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
     ||||||||||| ||||| |||||||||||    
T  21566868 gatcttctgatagccaatggccctcttgat 21566839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 14376993 - 14376761
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||||| ||||  ||||||||||||||| ||||| ||| ||||||||||||| ||||| || || |||| |||||| ||||||||||||||   |||||    
T  14376993 caaacaacatcaacaggagcatctctcctattgggtctcctctcatcattcaacctctgttttcccttgtcagcaggagcactatacggcttcggacgac 14376894  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| ||||||||||  || || |||||||||||||||||||||||||| || ||||| ||||| ||||| || || || ||||||||||| ||||||||    
T  14376893 tctgctgtcccttgctccttcgatcactcatcaccttgtaatgagctttcgtgtcctcctcatagatcctgcagctactaaccaattcagagaagtttct 14376794  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||||||||| |||||  | |||||||||||    
T  14376793 gatcttctgatacccaatgtctctcttgatgtc 14376761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 19456227 - 19456456
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||  || || || || |||| |||||| |||||||| || ||   |||||    
T  19456227 caaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttgttttcctttgtcagcaggagcactatatggtttaggacgac 19456326  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| ||||| || ||||||| || |||||||||||| || |||||||||||||| ||||| || |||||||| || || || || |||||    
T  19456327 tctgttgtcccttacctctgcgttcactcaccagcttgtaatgagccttagtatcctcttcatatatcctgcagctgcttactaactctgagaaatttct 19456426  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    |||||| ||||| |||||| | ||||||||    
T  19456427 tatcttttgatagccaatacctctcttgat 19456456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 19466372 - 19466601
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||||||||| ||||||||||||||||||| ||||||||||||  || || || || |||| |||||| |||||||| || ||   |||||    
T  19466372 caaacaatctcagtaggagtatctctcctcttgggcctcctctcatcattcagcctttgttttcctttgtcagcaggagcactatatggtttaggacgac 19466471  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| ||||| || ||||||| || |||||||||||| || |||||||||||||| ||||| || |||||||| || || || || |||||    
T  19466472 tctgttgtcccttacctctgcgttcactcaccagcttgtaatgagccttagtatcctcttcatatatcctgcagctgcttactaactctgagaaatttct 19466571  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    |||||| ||||| |||||| | ||||||||    
T  19466572 tatcttttgatagccaatacctctcttgat 19466601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 21474802 - 21475010
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||||||| ||||||||||||||||||||| | |||||| ||||||||||||   |||||||||| |||| |||||| ||||||||||||||   |||    
T  21474802 aacaaacaatctcagtaggagcatctctcctcctaggcctcctctcatcattcagcatctgcttacccttgtcagcaggagcactatacggcttcggacg 21474901  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    ||||||                ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||     
T  21474902 actctg----------------cgctcactcatcaccttataatgagcttttgtatcctcttcataaatcctacagctgcttaccaattcagaaaaattc 21474985  T
Q  216 cttatcttctgataaccaatagccc 240  Q
    |||||||| |  || ||||||||||    
T  21474986 cttatcttttagtagccaatagccc 21475010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 15 - 172
Target Start/End: Complemental strand, 24515494 - 24515337
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    |||||||||||||||  ||||||||||||||||||||||||| ||||||||||||  ||||| || || |||| |||||| |||||||| || ||   ||    
T  24515494 taacaaacaatatcaacaggagcatctctcctcttgggcctcctctcatcattcagcctctgttttcccttgtcagcaggagcactatatggtttaggac 24515395  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatc 172  Q
    |||||||||||||||||||||| || |||||||||||||||||||||||||| |||||    
T  24515394 gactctgttgtcccttgcctctgcggtcactcatcaccttgtaatgagctttcgtatc 24515337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 18 - 240
Target Start/End: Complemental strand, 19486371 - 19486149
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| ||||||||| ||||||| ||||| || ||| |||||||||||||||| ||||| || |||| |||||| ||||| || |||||  ||||||    
T  19486371 caaacaatctcagtaggaacatctcttctcttaggtctcctctcatcattcaatctttgcttccctttgtcagcaggagcactgtagggcttcgaacgac 19486272  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      || || || |||   || ||||||||||| ||||||||||||||||| ||||||||||| || || ||||||||||| |||||||||||||| |  ||    
T  19486271 cttgctggcctttgttcctccgctcactcataaccttgtaatgagctttggtatcctcttcgtagattctacaactgctcaccaattcagaaaattgcct 19486172  T
Q  218 tatcttctgataaccaatagccc 240  Q
     ||||||||||||||||| ||||    
T  19486171 aatcttctgataaccaatggccc 19486149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 10465929 - 10465696
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||| ||||| |||| |||| |||||||||||||||||||| | |||||||||| | ||||||| || |||| |||| | ||| | || |||||   |    
T  10465929 gtaacagacaatctcagcaggaacatctctcctcttgggcctcctatcatcattcattttctgctttcccttgtcagcaagagcattgtaaggcttagga 10465830  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| || || | |||||||||||||||||||||||||||||| || || ||||| ||||| || ||||| ||||| ||||| ||      
T  10465829 cgactctgctgtcccttacccctcctctcactcatcaccttgtaatgagcttttgtgtcttcctcatatatcctgcagctgctcaccaactcagagaaaa 10465730  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
     ||| ||||||||||| || ||||||||||||||    
T  10465729 ctctaatcttctgataccctatagccctcttgat 10465696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 89 - 250
Target Start/End: Complemental strand, 34642591 - 34642430
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatccta 188  Q
    |||||| ||||||||||||||   ||||||||||||||||||||| || || |||||||||||||||||||||||  ||| ||| |||||||| || ||     
T  34642591 agcaggagcactatacggcttaggacgactctgttgtcccttgcccctccgttcactcatcaccttgtaatgagcccttgaatcttcttcatagattctg 34642492  T
Q  189 caactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    || || |||| ||| |||||||   |||| ||||| ||||| ||||| ||||||||||||||    
T  34642491 cagctacttatcaactcagaaagagttctgatcttttgatagccaatggccctcttgatgtc 34642430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 16813844 - 16814073
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||| ||||||||||||| || ||| ||||||||||||||||||| |  || |||||  |||| ||||| || || ||   |||||    
T  16813844 caaacaatctcagcaggatcatctctcctcttaggtctcctctcatcattcaatctctgttcccctttgtttacaggagcactgtagggtttcggacgac 16813943  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      ||||| ||||||   || |||||| || | | ||| || |||||||| |||||||| ||||| ||| |  | || || ||||| || |||||||||||    
T  16813944 cttgttgacccttgttcctccgctcattcctaatcttatagtgagctttggtatcctcctcatatatcatgtagctactcaccaactcggaaaagtttct 16814043  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||||||||||||||||||||    
T  16814044 tatcttctgataaccaatagccctcttgat 16814073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 19881671 - 19881829
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatccta 188  Q
    ||||||||| || ||||||||   |||||| |||||| ||||||| || || ||||||||||||||||||||||| |||| ||| |||||||| || ||     
T  19881671 agcaggggcgctgtacggcttaggacgactttgttgttccttgcccctccgttcactcatcaccttgtaatgagcctttgaatcttcttcatagattctg 19881770  T
Q  189 caactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    || || |||| ||| || ||||   |||| ||||||||||||||||| |||||||||||    
T  19881771 cagctacttatcaactcggaaagagttctgatcttctgataaccaatggccctcttgat 19881829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 8720782 - 8720553
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  |||| ||||||||||||| |||||| ||||||||||||||||  | |  || |||||  |||| ||||| || || ||   |||||    
T  8720782 caaacaatctcatcaggatcatctctcctcttaggcctcctctcatcattcaatctaggttcccctttgtttacaggagcactgtagggtttcggacgac 8720683  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
      ||||| ||||||   || |||||  || | | |||||| |||||||| |||||||| ||||| |||||||| || || ||||| || |||||||| ||    
T  8720682 cttgttgacccttgttcctccgctcgttcctaatcttgtagtgagctttggtatcctcctcatatatcctacagctactcaccaactcggaaaagttcct 8720583  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    |||||||||||||||||||||||| |||||    
T  8720582 tatcttctgataaccaatagcccttttgat 8720553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 140 - 250
Target Start/End: Original strand, 15462662 - 15462772
Alignment:
Q  140 ctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagcc 239  Q
    ||||||||||||||||||||||||||| |||||||| |||||||||||||| || || ||||| || || ||  | || ||||||||||| ||||| ||     
T  15462662 ctcactcatcaccttgtaatgagctttcgtatcctcctcataaatcctacagctactcaccaactccgagaaaatcctgatcttctgatatccaatggct 15462761  T
Q  240 ctcttgatgtc 250  Q
    |||||||||||    
T  15462762 ctcttgatgtc 15462772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 247
Target Start/End: Original strand, 18660119 - 18660352
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||  |||||||||   ||| |||||||||| | | |||||||||| |  ||||||| ||| || | |||||| ||||| || ||||||  |    
T  18660119 gtaacaaacaacttcagtaggattctctttcctcttgggtcccctctcatcattaaccctctgctcacccttatcagcaggagcactgtaaggctttgga 18660218  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||||| || || | ||| ||| | | ||||||||   |||||||||||||||| |||||||| ||||| || || |||||||| |||| |||||||||||    
T  18660219 cgactttgctgactcttacctttcctctcactcacagccttgtaatgagctttcgtatcctcctcatagattctgcaactgctcaccagttcagaaaagt 18660318  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
    | |  ||||||| ||| |||||  ||||||||||    
T  18660319 tacggatcttctaatatccaatgaccctcttgat 18660352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 144 - 250
Target Start/End: Complemental strand, 20010452 - 20010346
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctct 243  Q
    ||||||||||| |||||||| ||||||||||| |||||||| ||||| || || |||||||| || ||  |||| ||||||||||| ||||| || ||||    
T  20010452 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattctgagaaaattctgatcttctgatatccaatggctctct 20010353  T
Q  244 tgatgtc 250  Q
    |||||||    
T  20010352 tgatgtc 20010346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 250
Target Start/End: Original strand, 24367620 - 24367836
Alignment:
Q  34 gagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcc 133  Q
    ||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || |||||   |||| |||| |||||||| ||    
T  24367620 gagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacc 24367719  T
Q  134 tctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 233  Q
     || | ||||||||| | ||||||||||||||| || || |||| ||| || ||||| ||| | ||||| ||| | |||  ||| |||| |||||| |||    
T  24367720 cctcctctcactcattatcttgtaatgagctttggtgtcttcttgatagattctacacctgttaaccaactcatagaagactctgatctgctgatatcca 24367819  T
Q  234 atagccctcttgatgtc 250  Q
    || || |||||||||||    
T  24367820 atggctctcttgatgtc 24367836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 5836237 - 5836139
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||||||||||||   |||||||||||||||||||||  | |||||| |||    |||||| |||||||| ||||||||||| ||||||||    
T  5836237 agcaggggcactatacggcttaggacgactctgttgtcccttgcccttccgctcattcacagtcttgtagtgagctttggtatcctcttcgtaaatcct 5836139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 138 - 247
Target Start/End: Complemental strand, 30677981 - 30677872
Alignment:
Q  138 cgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 237  Q
    ||||||||||| |||||||||| |||||| ||||| || ||||| ||||| |||||||| || ||||||||||| |  |  ||||||||||| ||||| |    
T  30677981 cgctcactcataaccttgtaattagctttggtatcttcctcatagatcctgcaactgctcactaattcagaaaattgacggatcttctgatatccaatgg 30677882  T
Q  238 ccctcttgat 247  Q
    ||| ||||||    
T  30677881 cccgcttgat 30677872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 247
Target Start/End: Original strand, 23081624 - 23081856
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    ||||||||||| |||  |||||||||| || || | |||| | |||||||||| | ||| ||||| || || | |||||  ||||| || ||||||  ||    
T  23081624 taacaaacaatctcaacaggagcatctttcttcctaggccgcctctcatcattaactctttgctttcctttatcagcagcagcactgtaaggctttggac 23081723  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    ||||||| || || ||| || | |||||| |||  | |||||||||||| || |||||||| |||||||| || |||||||| || |  ||||||||| |    
T  23081724 gactctgctgacctttgactttccgctcattcacaatcttgtaatgagccttagtatcctcctcataaattctgcaactgctcactagctcagaaaaggt 23081823  T
Q  215 tcttatcttctgataaccaatagccctcttgat 247  Q
     |  |||||||| |||||||| |||| ||||||    
T  23081824 acgaatcttctggtaaccaattgcccgcttgat 23081856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 18 - 212
Target Start/End: Complemental strand, 25958830 - 25958636
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| ||||||||||||||||| ||||| || ||| ||||||||| || ||| ||||  || | || | || | |||||||| ||||||  |||||    
T  25958830 caaacaatctcagtaggagcatctctactcttaggtctcctctcatcatccagtctttgctccccttcgtcaacaagagcactataaggctttggacgac 25958731  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    | || || || || |||||   |||  |||  | |||||| |||||| | |||||||| ||||||||||| |||||||| ||||  |||||||||    
T  25958730 tttgctgcccttttcctctcttctctttcactatcttgtagtgagctctagtatcctcctcataaatcctgcaactgctcaccagctcagaaaag 25958636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 240
Target Start/End: Complemental strand, 23084769 - 23084680
Alignment:
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccc 240  Q
    |||||||||||||||| ||||| || ||||| || ||||||||||| |||| ||||||||| || |  ||||||| ||| ||||| ||||    
T  23084769 ccttgtaatgagctttagtatcttcctcatagattctacaactgctcaccagttcagaaaaattacggatcttctaatacccaatggccc 23084680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 187
Target Start/End: Complemental strand, 2871811 - 2871713
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||||||||||| ||| ||||   |||||||||||||||||||||  | | |||| |||  | |||||| ||||| || |||||||||||||| |||||    
T  2871811 agcaggggcactgtacagcttaggacgactctgttgtcccttgcccttcctctcattcactatcttgtagtgagccttggtatcctcttcatagatcct 2871713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 152 - 194
Target Start/End: Original strand, 22437207 - 22437249
Alignment:
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactg 194  Q
    |||||||||||| || |||||||||||||||||||| ||||||    
T  22437207 cttgtaatgagccttggtatcctcttcataaatcctgcaactg 22437249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 133
Target Start/End: Complemental strand, 22829395 - 22829351
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcc 133  Q
    |||||||||||| ||||||||   |||||||||||||||||||||    
T  22829395 agcaggggcactgtacggcttaggacgactctgttgtcccttgcc 22829351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 250
Target Start/End: Complemental strand, 24515333 - 24515269
Alignment:
Q  186 ctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    ||||| ||||| || || || ||||||||||| || ||||| || ||||||||||||||||||||    
T  24515333 ctacagctgctcactaactccgaaaagtttctaattttctggtatccaatagccctcttgatgtc 24515269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523 (Bit Score: 119; Significance: 7e-61; HSPs: 2)
Name: scaffold0523
Description:

Target: scaffold0523; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 5818 - 6035
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtc 126  Q
    |||||||||||||||||||||||  ||||| ||||||||||||||||||||||||| |||| |||||||   |||||||||||   |||||| |||||||    
T  5818 tcagtaggagcatctctcctcttaagcctcctctcatcattcaatctctgcttacccttgtcagcaggg---ctatacggcttcggacgactatgttgtc 5914  T
Q  127 ccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 226  Q
    |||| ||||| |||||||||||||||||||||| |||||| |||||||||||||| ||||| || || |||||||||||||| || || |||||||| ||    
T  5915 ccttacctctgcgctcactcatcaccttgtaataagctttcgtatcctcttcatatatcctgcagctacttaccaattcagagaaattccttatcttttg 6014  T
Q  227 ataaccaatagccctcttgat 247  Q
    ||| |||||||||||||||||    
T  6015 atagccaatagccctcttgat 6035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0523; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 36 - 212
Target Start/End: Complemental strand, 11660 - 11484
Alignment:
Q  36 gcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctc 135  Q
    |||||||||||||||||| || | ||||||  ||   ||||||| || |||| |||| | ||| | || |||||   |||| ||||||||||||| || |    
T  11660 gcatctctcctcttgggcttcctatcatcacccatcttctgctttcctttgtcagcaagagcaatgtaaggcttaggacgattctgttgtcccttacccc 11561  T
Q  136 tacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    | | ||||||||| | ||||||||||||||| || || ||||||||||||||||| ||| | ||||| || ||||||    
T  11560 tcctctcactcattatcttgtaatgagctttggtgtcttcttcataaatcctacacctgttaaccaactccgaaaag 11484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0151 (Bit Score: 119; Significance: 7e-61; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 16 - 250
Target Start/End: Complemental strand, 479 - 245
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||||||||||  |||||||||||||||||||||||||  |||||||||| || ||||||||||| |||| || ||| ||||||||||||||   |||    
T  479 aacaaacaatatctataggagcatctctcctcttgggccttctctcatcatttaacctctgcttacccttgtcagaaggagcactatacggcttcggacg 380  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    ||| || |||||||| |||||||| | ||||||||||||||||||||||||  | ||||| ||||||||||| |||||||||||||| ||||| ||||||    
T  379 actgtgctgtcccttacctctacgtttactcatcaccttgtaatgagctttcctgtcctcctcataaatcctgcaactgcttaccaaatcagagaagttt 280  T
Q  216 cttatcttctgataaccaatagccctcttgatgtc 250  Q
     | ||||||||||||||||| || |||||||||||    
T  279 ttaatcttctgataaccaatggctctcttgatgtc 245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 6174 - 6405
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||||| ||||||||||||||||||||||| |||||||||| || || |||||||| |||| || ||| ||||||||||||||   |||||    
T  6174 caaacaatgtcagtaagagcatctctcctcttgggcctcctctcatcatttaacct-tgcttacccttgtcagtaggagcactatacggcttcggacgac 6272  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||||||||| || |||||||||||||||||||||||||| || ||||| |||||||||||||| |||||| |||||||| | ||||| ||    
T  6273 tctgctgtcccttgcctctgcgttcactcatcaccttgtaatgagctttcgtgtcctcctcataaatcctacagctgcttcccaattcaaagaagttcct 6372  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    ||| |||||||| ||||| || |||||||||||    
T  6373 tattttctgatagccaatggctctcttgatgtc 6405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 117; Significance: 1e-59; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 98522 - 98286
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| |||||||||||||| |||||||||| |||||||||| || ||||||||||| |||| |||| | |||||||| |||||   |    
T  98522 gtaacaaacgatctcagcaggagcatctctccacttgggcctcctctcatcatttaacctctgcttacccttgtcagcatgagcactatatggcttcgga 98423  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||||||||||||||||| ||||| |  |||||||| |||||||||||||| || |||||||||||||  |||||||| ||||||||||| ||||||||||    
T  98422 cgactctgttgtcccttacctctcctttcactcattaccttgtaatgagccttcgtatcctcttcattgatcctacagctgcttaccaactcagaaaagt 98323  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| ||||||||||| ||||| || |||||||||||    
T  98322 ttctgatcttctgatacccaatggctctcttgatgtc 98286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 16 - 240
Target Start/End: Original strand, 176354 - 176578
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||| ||||| || |||||||||||||||||| | |||||| |||||||||||| |||||| ||| | ||||| ||||| ||||||||||| ||   |||    
T  176354 aacagacaatctctgtaggagcatctctcctcctaggcctcctctcatcattcagtctctgtttaactttgttggcaggagcactatacggtttcggacg 176453  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| || || ||||| ||| |||||||     
T  176454 actctgctgtcccttacctctacgctcactcatcaccttataatgagcttttgtatcctcttcatagatcctacagctactcaccaaatcataaaagttc 176553  T
Q  216 cttatcttctgataaccaatagccc 240  Q
    |||||||| || || ||||| ||||    
T  176554 cttatcttttggtagccaatggccc 176578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 116; Significance: 4e-59; HSPs: 1)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 43356 - 43125
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||| ||||| ||| ||||||||||||||||||| |||||| ||||||||||||  ||||| ||||| ||||||| ||| ||||||||| | |||  |||    
T  43356 aacagacaatctcattaggagcatctctcctcttaggcctcctctcatcattcagcctctgtttacctttgttagaaggagcactatacagttttggacg 43257  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    ||||||||||||||| ||||| ||||||||||||||||||||||||  ||| |||||||||| ||| |||||||| ||||||||||| || || || ||     
T  43256 actctgttgtcccttacctctgcgctcactcatcaccttgtaatgacatttggtatcctcttaatatatcctacagctgcttaccaaatctgagaaattc 43157  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    |||||||| |||||||||||||||||||||||    
T  43156 cttatcttttgataaccaatagccctcttgat 43125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 115; Significance: 2e-58; HSPs: 2)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 37 - 247
Target Start/End: Complemental strand, 12330 - 12120
Alignment:
Q  37 catctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctct 136  Q
    |||||||||||||||||||  |||||||||||| |||||||||||| |||| |||||| ||||| ||||||||   |||||| || | ||||||||||||    
T  12330 catctctcctcttgggcctactctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctct 12231  T
Q  137 acgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaata 236  Q
    ||| ||||||||||||||||||||| |||| |||||||| |||||||||||||| ||||||||||| ||||  ||||||||||| ||||||||||||||     
T  12230 acgatcactcatcaccttgtaatgatctttcgtatcctcctcataaatcctacagctgcttaccaaatcagtgaagtttcttattttctgataaccaatg 12131  T
Q  237 gccctcttgat 247  Q
    || ||||||||    
T  12130 gctctcttgat 12120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261; HSP #2
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 37 - 247
Target Start/End: Complemental strand, 20510 - 20300
Alignment:
Q  37 catctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctct 136  Q
    |||||||||||||||||||  |||||||||||| |||||||||||| |||| |||||| ||||| ||||||||   |||||| || | ||||||||||||    
T  20510 catctctcctcttgggcctactctcatcattcagtctctgcttacccttgtcagcaggagcactgtacggcttcggacgactatgctatcccttgcctct 20411  T
Q  137 acgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaata 236  Q
    ||| ||||||||||||||||||||| |||| |||||||| |||||||||||||| ||||||||||| ||||  ||||||||||| ||||||||||||||     
T  20410 acgatcactcatcaccttgtaatgatctttcgtatcctcctcataaatcctacagctgcttaccaaatcagtgaagtttcttattttctgataaccaatg 20311  T
Q  237 gccctcttgat 247  Q
    || ||||||||    
T  20310 gctctcttgat 20300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2062 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold2062
Description:

Target: scaffold2062; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 807 - 575
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||||||  |||||||||||||||||||||||||| |||||||||||| || ||||||||| |||| |||||| | |||||| |||||   |||||    
T  807 caaacaatatccataggagcatctctcctcttgggcctcctctcatcattcagtcgctgcttacccttgtcagcaggagtactatatggcttcggacgac 708  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| |||||||  |||||||||||||||||||||| ||| || ||||| |||||||||||||| ||| ||||||||| ||| ||||| ||    
T  707 tctgttgtcccttacctctacattcactcatcaccttgtaatgagatttcgtgtcctcctcataaatcctacagctggttaccaatttagagaagttcct 608  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    |||  ||||||| ||||| || |||||||||||    
T  607 tattctctgatagccaatggctctcttgatgtc 575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1032 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold1032
Description:

Target: scaffold1032; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 30 - 250
Target Start/End: Complemental strand, 738 - 518
Alignment:
Q  30 gtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtccct 129  Q
    ||||||||||||||||||||||||||| |||||||||| || |||||||| || ||||  ||||| ||||||||||||||   |||||| || |||||||    
T  738 gtaggagcatctctcctcttgggcctcctctcatcatttaacctctgcttccccttgtcggcaggagcactatacggcttcggacgactttgctgtccct 639  T
Q  130 tgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 229  Q
    |||||||| | |||||||||||||||||||||||||| ||||| || ||| ||||||| || || |||||||| ||||| ||||||||||| ||||||||    
T  638 tgcctctatgttcactcatcaccttgtaatgagctttggtatcttcctcagaaatcctgcagctacttaccaaatcagagaagtttcttattttctgata 539  T
Q  230 accaatagccctcttgatgtc 250  Q
    |||||| || |||||||||||    
T  538 accaatggctctcttgatgtc 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 818 - 586
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| || ||||||||||||||||||||||||||| |||||||||| || |||| |||||| |||| |||||| ||| ||||||||||   |||||    
T  818 caaacaatctcggtaggagcatctctcctcttgggcctcctctcatcatttaacctcttcttacccttgtcagcaggagcattatacggcttcggacgac 719  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| ||||| || ||||||||||||||||||||||||||  | ||||| ||||||||||| || || |||||||| ||||| || |||||    
T  718 tctgttgtcccttacctctgcgttcactcatcaccttgtaatgagctttgttgtcctcctcataaatcctgcagctacttaccaaatcagagaaatttct 619  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    | | |||||||||||||| || |||||||||||    
T  618 ttttttctgataaccaatggctctcttgatgtc 586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 113; Significance: 3e-57; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 27 - 247
Target Start/End: Original strand, 52029 - 52249
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtc 126  Q
    ||||||||||||||||||||| | |||||| ||||||||||||  ||||| ||||| |||| |||||| ||||||||| | ||   ||| ||||| ||||    
T  52029 tcagtaggagcatctctcctcctaggcctcctctcatcattcagcctctgtttacctttgtcagcaggagcactatacagtttcggacggctctgctgtc 52128  T
Q  127 ccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 226  Q
    |||| ||||| |||||||||||||| || |||||||| |||||||||||||||||||||||||| |||||||||||||||||||  || |||||||| ||    
T  52129 ccttacctctgcgctcactcatcactttataatgagcctttgtatcctcttcataaatcctacagctgcttaccaattcagaaatattccttatcttttg 52228  T
Q  227 ataaccaatagccctcttgat 247  Q
    |||||||||||||| ||||||    
T  52229 ataaccaatagcccgcttgat 52249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1056 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold1056
Description:

Target: scaffold1056; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 2089 - 2317
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||| ||| |||||||||||||||| |||||| |||||| ||||||||||||  ||||| ||||| |||| |||||  |||||| |||| ||   |||||    
T  2089 caaataatttcagtaggagcatctcacctcttaggcctcctctcatcattcagcctctgtttacctttgtcagcagaagcacta-acggtttcggacgac 2187  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||  | |||||| ||||| |||||||||||||| || |||||||||||||||||||||||||| || ||||| |||||||| ||||||||||| |||||    
T  2188 tctactatcccttacctctgcgctcactcatcactttataatgagcttttgtatcctcttcatagattctacagctgcttactaattcagaaaaatttct 2287  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||||||||||||| ||||||    
T  2288 tatcttctgataaccaatagcccgcttgat 2317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 106; Significance: 4e-53; HSPs: 2)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 426 - 193
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| ||||||||||||||| ||||||||| |||||||||||||| ||||||| || |||| |||||||||||| ||||||||        
T  426 gtaacaaacgatctcagcaggagcatctctcctattgggcctcctctcatcattcaatatctgctttcccttgtcagcaggggcactgtacggcttaggg 327  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
     |||||||||||||||| ||||| || |||||||||||||| ||||||||||| || ||||| || || ||||||||||| || ||||| ||||| |||     
T  326 tgactctgttgtcccttacctcttcgttcactcatcaccttataatgagctttggtgtcctcctcgtagatcctacaactactcaccaaatcagagaaga 227  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||||||||||| ||||| || ||||||||    
T  226 ttcttatcttctgatagccaatggctctcttgat 193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222; HSP #2
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 235
Target Start/End: Original strand, 21183 - 21400
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| || |||||||||||||||||||||| ||||||||||||  ||||| || || |||| |||||||||||||||||| ||   |||||    
T  21183 caaacaatctcagcagaagcatctctcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcaggggcactatacggtttaggacgac 21282  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||  |||||||||||| |||||||||||||||||||||||||||||||  |||| || ||||| || || || || || ||||| || || || |||||    
T  21283 tctactgtcccttgcctttacgctcactcatcaccttgtaatgagctttcctatcttcctcatatattctgcagctactcaccaactcggagaaatttct 21382  T
Q  218 tatcttctgataaccaat 235  Q
    |||||||||||| |||||    
T  21383 tatcttctgatagccaat 21400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1530 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold1530
Description:

Target: scaffold1530; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 873 - 1105
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||||||||||||||||| |||||| ||||||||||||||||||||||||| |||| |||||| |||||||| || ||   |||||    
T  873 caaacaatctcagcaggagcatctctcctcttaggcctcctctcatcattcaatctctgcttacccttgtcagcaggagcactatatggtttaggacgac 972  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||| ||  ||||||| ||||| || || || || || ||||| ||||| ||  ||||    
T  973 tctgttgtcccttacctctgcgctcactcatcaccttgtaatgagccttattatcctcctcatatattctgcagctactcaccaactcagagaaaattct 1072  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||||||||| ||||| || |||||||||||    
T  1073 aatcttctgatacccaatggctctcttgatgtc 1105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 104; Significance: 6e-52; HSPs: 2)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 8400 - 8165
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    |||||||||||||||  | ||||||||||||||||||| ||| ||||||||||||  |||||||| || |||| |||||| ||||||||||||||   ||    
T  8400 taacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcggac 8301  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||||||  | ||||| ||||| || || || |  |||||||||||||| |||||    
T  8300 gactctgttgtcccttgcccctgcggtcactcatcaccttgtaatgagctttcatgtcctcctcatagattctgcagcaacttaccaattcagagaagtt 8201  T
Q  215 tcttatcttctgataaccaatagccctcttgatgtc 250  Q
    | | ||||||||||| ||||| || |||||||||||    
T  8200 tttgatcttctgatacccaatggctctcttgatgtc 8165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 18614 - 18379
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    |||||||||||||||  | ||||||||||||||||||| ||| ||||||||||||  |||||||| || |||| |||||| ||||||||||||||   ||    
T  18614 taacaaacaatatcaacatgagcatctctcctcttgggtctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatacggcttcggac 18515  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    ||||||||||||||||||| || || ||||||||||||||||||||||||||  | ||||| ||||| || || || |  |||||||||||||| |||||    
T  18514 gactctgttgtcccttgcccctgcggtcactcatcaccttgtaatgagctttcatgtcctcctcatagattctgcagcaacttaccaattcagagaagtt 18415  T
Q  215 tcttatcttctgataaccaatagccctcttgatgtc 250  Q
    | | ||||||||||| ||||| || |||||||||||    
T  18414 tttgatcttctgatacccaatggctctcttgatgtc 18379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 101; Significance: 4e-50; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 319612 - 319844
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||||||  ||| ||||||||||||||| ||||||||| ||||||||||||  ||||||||| | |||| |||||| ||||||||||||||   |||||    
T  319612 caaacaatcccagcaggagcatctctcctattgggcctcctctcatcattcagcctctgcttatccttgtcagcaggagcactatacggcttcggacgac 319711  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| ||||| ||||| || || ||||| |||||||||||||||||||| || ||||| |||||||| || || || |||||||||||||| |||||  |    
T  319712 tctgctgtcctttgccccttcgatcacttatcaccttgtaatgagctttcgtgtcctcctcataaattctgcagctacttaccaattcagagaagttctt 319811  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    |||||||||||| ||||| || |||||||||||    
T  319812 tatcttctgatacccaatggctctcttgatgtc 319844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 18 - 94
Target Start/End: Original strand, 326076 - 326151
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcagg 94  Q
    |||||||| |||| ||||||||||||||| |||| |||| ||||||||||||  ||||||||||| |||||||||||    
T  326076 caaacaatctcagcaggagcatctctcctattgg-cctcctctcatcattcagcctctgcttacccttgttagcagg 326151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664 (Bit Score: 100; Significance: 1e-49; HSPs: 2)
Name: scaffold0664
Description:

Target: scaffold0664; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 14 - 229
Target Start/End: Original strand, 7403 - 7618
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| ||||||||||||||| ||||||||| ||||||||||||| ||||||||||| |||| | |||| ||||||||||||||   |    
T  7403 gtaacaaacaatctcagcaggagcatctctcctattgggcctcctctcatcattcaacctctgcttacccttgtcaacaggagcactatacggcttcgga 7502  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| ||||| ||||  || || |||||||||||||||||||||||||| || ||||| ||||| || || || || |||||||||||||| ||||    
T  7503 cgactctgctgtcctttgctccttcgatcactcatcaccttgtaatgagctttcgtgtcctcctcatagattctgcagctacttaccaattcagagaagt 7602  T
Q  214 ttcttatcttctgata 229  Q
    | || |||||||||||    
T  7603 tcctgatcttctgata 7618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0664; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 250
Target Start/End: Original strand, 3 - 58
Alignment:
Q  195 cttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||||||||||||| ||||| || ||||||||||| ||||| || |||||||||||    
T  3 cttaccaattcagagaagttcctgatcttctgatacccaatggctctcttgatgtc 58  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 31 - 208
Target Start/End: Original strand, 29909 - 30086
Alignment:
Q  31 taggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtccctt 130  Q
    ||||||||||||||||| | |||||| |||||||||||| |||||||||||| |||| |||||| |||||| |||| ||   ||||||||| ||||||||    
T  29909 taggagcatctctcctcctaggcctcctctcatcattcagtctctgcttacctttgtcagcaggagcactagacggtttcggacgactctgctgtccctt 30008  T
Q  131 gcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcaga 208  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| || |||||||| || ||||| |||||    
T  30009 gcctctacgctcactcatcaccttataatgagcctttgtatcctcttcatagattctacaactactcaccaaatcaga 30086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1299 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: scaffold1299
Description:

Target: scaffold1299; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 35 - 246
Target Start/End: Complemental strand, 1766 - 1555
Alignment:
Q  35 agcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcct 134  Q
    |||||||||||||||||||||  |||||||||||| ||  ||||| || |||| |||||||||||| ||||||||   ||||||||||| |||||| ||     
T  1766 agcatctctcctcttgggccttctctcatcattcagtcgttgctttcccttgtcagcaggggcactgtacggcttaggacgactctgttttcccttaccc 1667  T
Q  135 ctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaa 234  Q
    || ||||||||||||||||||||||||||||||| ||| || ||||| || || || ||||||||||| ||||||||  |||| ||||||||||| ||||    
T  1666 ctccgctcactcatcaccttgtaatgagcttttgaatcttcctcatagattctgcagctgcttaccaactcagaaaaagttctgatcttctgatagccaa 1567  T
Q  235 tagccctcttga 246  Q
    | ||||||||||    
T  1566 tggccctcttga 1555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1517 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold1517
Description:

Target: scaffold1517; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 1426 - 1193
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||| ||||| |||| ||||||||||||||||||||||||| | |||||||||| | |||| || || |||| |||||| ||||| || |||||   |    
T  1426 gtaacagacaatctcagcaggagcatctctcctcttgggcctcctatcatcattcattttctgttttcccttgtcagcaggagcactgtaaggcttagga 1327  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| ||||| | |||||||||||||||||||||||||||||| || || ||||| |||||||| ||||||||||| ||||| |||     
T  1326 cgactctgctgtcccttacctctcctctcactcatcaccttgtaatgagcttttgtgtcttcctcatatatcctacagctgcttaccaactcagagaaga 1227  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
     ||| ||||||||||| || ||||| || |||||    
T  1226 ctctgatcttctgataccctatagctcttttgat 1193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 18 - 247
Target Start/End: Complemental strand, 480 - 251
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||| || |||||||||||||||||||||||||| ||  ||||||||||||  |  ||||| || |||| |||||||| ||| ||||||||   |||||    
T  480 caaactatctcagtaggagcatctctcctcttgggtcttctctcatcattcagccgttgctttcccttgtcagcagggggactgtacggcttaggacgac 381  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || ||||||||||||||||||||||||||||||| ||| || || || || || || ||||||||||| ||||||||  ||||    
T  380 tctgttgtcccttacccctccgctcactcatcaccttgtaatgagcttttgaatcttcctcgtagattctgcagctgcttaccaactcagaaaaagttct 281  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
     ||||||||||| ||||| |||||||||||    
T  280 gatcttctgatagccaatggccctcttgat 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 5422 - 5654
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||||||||||||||| |||||||| ||||||||||||| ||||| || || || | |||||| |||||||| || ||   |||||    
T  5422 caaacaatctcagcaggagcatctctcctcgtgggcctcctctcatcattcaacctctgttttcccttatcagcaggagcactatatggtttaggacgac 5521  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||||||||| || ||||| || |||||||||||||||||||||||||| ||||| |||||||| ||||| || || || ||||| ||||| ||  ||||    
T  5522 tctgttgtcctttacctcttcgttcactcatcaccttgtaatgagctttagtatcttcttcatatatcctgcagctactcaccaactcagagaaaattct 5621  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    |||||||||||| ||||| |  |||||||||||    
T  5622 tatcttctgatacccaatggttctcttgatgtc 5654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 93; Significance: 2e-45; HSPs: 4)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 11845 - 11609
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||||||||||||||||||||||||||||| |||||||||| | ||||||||| || |||| |||||| |||||||| || ||   |    
T  11845 gtaacaaacgatctcagtaggagcatctctcctcttgggcctcctctcatcattaagtctctgctttcctttgtcagcaggagcactatatggtttagga 11746  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| |||||||| ||||| | ||||||||||||||| |||||||| || || ||||||||||| ||||| || ||||||||||| ||||| ||      
T  11745 cgactctgctgtcccttacctcttctctcactcatcaccttataatgagccttagtgtcctcttcatatatcctgcagctgcttaccaaatcagagaaaa 11646  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    || | ||||| ||||| || || || |||||||||||    
T  11645 ttttaatcttttgataccctatggctctcttgatgtc 11609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 1887 - 1655
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||||||||| |||||||||||||| ||||||||||||  ||||| || || |||| |||||| |||||||| || ||   | |||    
T  1887 caaacaatttcagcaggagcatctatcctcttgggcctcctctcatcattcagcctctgttttcctttgtcagcaggagcactatatggtttaggatgac 1788  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||| ||||| |||||||| ||| | |  || || ||||| ||||| ||  ||||    
T  1787 tctgctgtcccttacctctgcgctcactcatcaccttgtaatgagctttagtatcttcttcatatatcatgctgctactcaccaaatcagagaaaattct 1688  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    |||||||||||| ||||| || |||||||||||    
T  1687 tatcttctgatacccaatggctctcttgatgtc 1655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 70867 - 70958
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 235  Q
    ||||||||||| || ||||| ||||||||||| ||||||||| |||| || || ||||||||||| || ||||| ||||||||||| |||||    
T  70867 ctcatcaccttatagtgagcctttgtatcctcctcataaatcatacagctactcaccaattcagagaaatttctgatcttctgatacccaat 70958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 70737 - 70817
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcagg 94  Q
    ||||||||||| ||||  |||||||||||||| | | |||| | |||||||||||||||| || || || |||| ||||||    
T  70737 gtaacaaacaacatcaacaggagcatctctccccctaggccgcctctcatcattcaatctttgttttcctttgtcagcagg 70817  T

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Target: scaffold0074 (Bit Score: 92; Significance: 9e-45; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 27 - 250
Target Start/End: Original strand, 15450 - 15673
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtc 126  Q
    |||| ||||||||||||||| ||||||||| |||||||||| || |||||||| |  |||| |||||| ||||||||||||||   ||||||||||||||    
T  15450 tcagcaggagcatctctcctattgggcctcctctcatcatttaacctctgctttcgcttgtcagcaggagcactatacggcttcggacgactctgttgtc 15549  T
Q  127 ccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctg 226  Q
    | ||||   | || |||||||||||||||||||||||||| || ||||| ||||| || || || || |||||||||||||| || ||||| ||||||||    
T  15550 ctttgctcattcgatcactcatcaccttgtaatgagctttcgtttcctcctcatagattctgcagctacttaccaattcagagaaatttctgatcttctg 15649  T
Q  227 ataaccaatagccctcttgatgtc 250  Q
    ||| ||||| || |||||||||||    
T  15650 atacccaatggctctcttgatgtc 15673  T

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Target: scaffold0010 (Bit Score: 90; Significance: 1e-43; HSPs: 3)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 39268 - 39038
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||||||||||  |||||||| || |||| |||||| |||||||| || ||   | |||    
T  39268 caaacaatctcagcaggagcatctctcctcttgggcctcctctcatcattcagcctctgctttcccttgtcagcaggagcactatatggtttaggaagac 39169  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| |||||||| ||||| || |||||||||||||||||||||||||| ||||| || ||||| ||||| || || || ||||| ||||||||  ||||    
T  39168 tctgctgtcccttacctcttcgttcactcatcaccttgtaatgagctttagtatcttcctcatatatcctgcagctactcaccaactcagaaaa--ttct 39071  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||||||| || ||||| || |||||||||||    
T  39070 aatcttctggtacccaatggctctcttgatgtc 39038  T

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Target: scaffold0010; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 247
Target Start/End: Original strand, 5317 - 5513
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | ||| || || || || | |||||| ||||  || ||||||  |||||| || || ||||||||| | | |||| |||  |    
T  5317 ggcctcatctcatcattaactctttgtttgcccttatcagcaggagcaccgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaa 5416  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||| || ||||| || ||||| || || ||| |||| ||||| ||||||||||| |  |||||||  |||||||| |||| ||||||    
T  5417 ccttgtaatgagccttagtatcttcctcatatattctgcaattgctcaccaactcagaaaagttacggatcttctagtaaccaattgcccgcttgat 5513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 180648 - 180563
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 229  Q
    |||||||||||||||||||| || |||||||| |||||||| || || || || |||| ||| || ||  |||| |||||||||||    
T  180648 ctcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagctactcaccatttctgagaaaattctgatcttctgata 180563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0865 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0865
Description:

Target: scaffold0865; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 1209 - 990
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||| ||||| | ||||||||||||||||||| | |||||| |||||||||||| |||||||||||| |||| | |||| ||||||||||| ||   |||    
T  1209 aacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgcttacccttgtcaacaggagcactatacggtttcggacg 1110  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||| ||||| || || || || || ||||| ||||| || ||     
T  1109 actctgctgtcccttacctctgcgctcactcatcaccttataatgagcttttgtgtcctcctcatatattctgcagctactcaccaaatcagagaaattc 1010  T
Q  216 cttatcttctgataaccaat 235  Q
    |||||||| || ||||||||    
T  1009 cttatcttttggtaaccaat 990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 235
Target Start/End: Complemental strand, 28222 - 28003
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||| ||||| | ||||||||||||||||||| | |||||| |||||||||||| |||||||||||| |||| | |||| ||||||||||| ||   |||    
T  28222 aacagacaatcttagtaggagcatctctcctcctaggcctcctctcatcattcagtctctgcttacccttgtcaacaggagcactatacggtttcggacg 28123  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||| ||||| || || || || || ||||| ||||| || ||     
T  28122 actctgctgtcccttacctctgcgctcactcatcaccttataatgagcttttgtgtcctcctcatatattctgcagctactcaccaaatcagagaaattc 28023  T
Q  216 cttatcttctgataaccaat 235  Q
    |||||||| || ||||||||    
T  28022 cttatcttttggtaaccaat 28003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0585 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0585
Description:

Target: scaffold0585; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 38 - 240
Target Start/End: Complemental strand, 775 - 574
Alignment:
Q  38 atctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctcta 137  Q
    |||||||||||| |||||| |||||||||||| |||||  ||||| |||| |||||| ||||| ||||| ||   ||||||||| |||||||| ||||||    
T  775 atctctcctcttaggcctcctctcatcattcagtctctatttacctttgtcagcaggagcactgtacggtttcggacgactctgctgtcccttacctcta 676  T
Q  138 cgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 237  Q
    | ||||||||||||||| |  |||||||||||||||||||||||||||||||| ||||| || |||| |||||| || |||||||| || || |||||||    
T  675 cactcactcatcaccttat-gtgagcttttgtatcctcttcataaatcctacagctgctcactaattaagaaaaattccttatcttttggtagccaatag 577  T
Q  238 ccc 240  Q
    |||    
T  576 ccc 574  T

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Target: scaffold0146 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 166
Target Start/End: Complemental strand, 219 - 71
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||||||||||||||| ||||| |||||||||||| |||||||||| || ||||||||||| |||| |||||| ||| | ||||||||   |||||    
T  219 caaacaatatcagtaggagcctctctgctcttgggcctcctctcatcatttaacctctgcttacccttgtcagcaggagcattttacggcttcggacgac 120  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttt 166  Q
    |||| |||||||||||||| || ||||||||||||||||||||||||||    
T  119 tctgctgtcccttgcctctgcgttcactcatcaccttgtaatgagcttt 71  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 54412 - 54648
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| | |||||| ||  || ||||||||| ||||||||||||| |||||||| || |||| |||||| |||||||||||||||  |    
T  54412 gtaacaaacgatctcagcaagagcatttcatctattgggcctcctctcatcattcaacctctgcttccctttgtcagcaggagcactatacggctttgga 54511  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| ||||| ||||  || || |||||||||||||| |||||||||||  | ||||| ||||| || || || || |||||||||||||| ||||    
T  54512 cgactctgatgtcctttgctccttcgatcactcatcaccttataatgagctttcatgtcctcctcatagattctgcagctacttaccaattcagagaagt 54611  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| ||||||||||| ||||| || || ||||||||    
T  54612 ttctgatcttctgatacccaatggctcttttgatgtc 54648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 208
Target Start/End: Original strand, 263593 - 263785
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||| || |||| |||||||||||||||   ||||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||||||   |||    
T  263593 aacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaagacg 263692  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcaga 208  Q
    |||||| |||||||| ||||| ||||||||||||||||| |||||| |||| || ||||| ||||| ||||| ||||  |||||||| |||||    
T  263693 actctgctgtcccttacctcttcgctcactcatcaccttataatgaactttggtgtcctcctcatagatcctgcaacgacttaccaaatcaga 263785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 85; Significance: 1e-40; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 32 - 208
Target Start/End: Original strand, 203764 - 203940
Alignment:
Q  32 aggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttg 131  Q
    |||||||||||||||   ||||||| |||||||||||| |||||||||||| |||| |||||||||||| ||||||||   ||||||||| ||||||||     
T  203764 aggagcatctctcctaacgggcctcctctcatcattcagtctctgcttacccttgtcagcaggggcactgtacggcttaggacgactctgctgtccctta 203863  T
Q  132 cctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcaga 208  Q
    ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| ||||| ||||  |||||||| |||||    
T  203864 cctcttcgctcactcatcaccttataatgagctttggtgtcctcctcatagatcctgcaacgacttaccaaatcaga 203940  T

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Target: scaffold0003; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 181
Target Start/End: Original strand, 424748 - 424840
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcata 181  Q
    |||||||||| | ||||||||   |||||| || |||||||||||  | |||||| ||| || |||||||||||| || |||||||| |||||    
T  424748 agcaggggcattgtacggcttaggacgactatgctgtcccttgcccttccgctcattcaccatcttgtaatgagccttggtatcctcctcata 424840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 247
Target Start/End: Complemental strand, 33309 - 33078
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    |||||||||| |||  ||||||||||||||||||||||||| ||||||||||||  ||||| || || |||| |||||| ||||| || || ||   |||    
T  33309 aacaaacaatttcaacaggagcatctctcctcttgggcctcctctcatcattcatcctctgttttcctttgtcagcaggagcactgtatggtttaggacg 33210  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagttt 215  Q
    |||||| |||||||| || || ||||||||||||||||||||||||||||| || || || ||||| ||||| || ||||||||||| ||||| ||  ||    
T  33209 actctgctgtcccttaccccttcgctcactcatcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaactcagagaaaatt 33110  T
Q  216 cttatcttctgataaccaatagccctcttgat 247  Q
    || ||||| ||||| |||||||| || |||||    
T  33109 ctaatcttttgatacccaatagctcttttgat 33078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0765 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0765
Description:

Target: scaffold0765; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 32 - 208
Target Start/End: Complemental strand, 6178 - 6002
Alignment:
Q  32 aggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttg 131  Q
    ||||||||||||||| || |||||| |||||||||||| ||| |||||||| |||| |||||||||||| ||||||||   ||||||||||||||||||     
T  6178 aggagcatctctcctattcggcctcctctcatcattcagtctttgcttacccttgtcagcaggggcactgtacggcttaggacgactctgttgtccctta 6079  T
Q  132 cctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcaga 208  Q
    ||||| || ||||||||||| || ||||||||||| || ||||| ||||||||||| |||   |||||||| |||||    
T  6078 cctcttcgttcactcatcactttataatgagctttggtgtcctcctcataaatcctgcaatgacttaccaaatcaga 6002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 80; Significance: 1e-37; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 250
Target Start/End: Complemental strand, 17422 - 17187
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    |||||||| || |||| ||||||||||||||| || |||||| |||||||||||| ||| || || || |||| |||||||||||| ||||| ||   ||    
T  17422 taacaaactatctcagcaggagcatctctcctattcggcctcctctcatcattcagtctttgttttcccttgtcagcaggggcactgtacggtttaggac 17323  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    ||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||| ||||| ||||| ||||   ||||||| ||||| ||| |    
T  17322 gactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgtgtcctcctcatagatcctgcaacgatttaccaaatcagagaagat 17223  T
Q  215 tcttatcttctgataaccaatagccctcttgatgtc 250  Q
    ||| ||||  || || || || || |||||||||||    
T  17222 tctaatctgttgctaccctatggctctcttgatgtc 17187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 27 - 181
Target Start/End: Complemental strand, 4775 - 4621
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtc 126  Q
    |||| ||||||||||||||| || |||||| |||||||||||| ||| ||||| || |||| |  ||||||||| ||||| ||   ||||||||| ||||    
T  4775 tcagcaggagcatctctcctatttggcctcctctcatcattcagtctttgctttcccttgtcaaaaggggcactgtacggtttaggacgactctgctgtc 4676  T
Q  127 ccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcata 181  Q
    |||| ||||| ||||||||||||||||| ||||||| |||||| ||||| |||||    
T  4675 ccttacctcttcgctcactcatcaccttataatgaggttttgtgtcctcctcata 4621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0239 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0239
Description:

Target: scaffold0239; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 202
Target Start/End: Complemental strand, 9724 - 9538
Alignment:
Q  16 aacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacg 115  Q
    ||||||| || |||| |||||||||||||||   ||||||| |||||||||| | |||| ||||||| || | |||||||||||| ||||||||   |||    
T  9724 aacaaactatctcagcaggagcatctctcctaacgggcctcctctcatcattaagtctcagcttacccttatcagcaggggcactgtacggcttaggacg 9625  T
Q  116 actctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaa 202  Q
    ||||||||||||||| ||||| ||||||||||||||||| ||||||||||| || ||||| ||||| ||||| ||||  ||||||||    
T  9624 actctgttgtcccttacctcttcgctcactcatcaccttataatgagctttggtgtcctcctcatagatcctgcaacgacttaccaa 9538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0405 (Bit Score: 77; Significance: 8e-36; HSPs: 1)
Name: scaffold0405
Description:

Target: scaffold0405; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 31 - 247
Target Start/End: Original strand, 5984 - 6200
Alignment:
Q  31 taggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtccctt 130  Q
    |||| |||||||||||| | |||||| ||||||||||||   |||| || || |||| |||||| ||||||||||| ||   ||||||||| || |||||    
T  5984 taggggcatctctcctcctaggcctcctctcatcattcagcatctgttttcctttgtcagcaggagcactatacggtttcggacgactctgctgaccctt 6083  T
Q  131 gcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataa 230  Q
     ||||| |||||||||||||| || ||||||||||| |||||||||||||| || ||| | ||||||||||| || || || || |||||||| ||||||    
T  6084 acctctgcgctcactcatcactttataatgagctttcgtatcctcttcatatattctaaagctgcttaccaaatccgagaaattccttatcttttgataa 6183  T
Q  231 ccaatagccctcttgat 247  Q
    ||||| |||| ||||||    
T  6184 ccaatggcccgcttgat 6200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 76; Significance: 3e-35; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 27 - 202
Target Start/End: Original strand, 40436 - 40611
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtc 126  Q
    |||| ||||||||||||||| || |||||| |||||||||||| ||| ||||| || |||| |||||||||||| ||||| ||   ||||||||||||||    
T  40436 tcagcaggagcatctctcctattcggcctcctctcatcattcagtctttgctttcccttgtcagcaggggcactgtacggtttaggacgactctgttgtc 40535  T
Q  127 ccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaa 202  Q
    || | ||||| ||||||||||||||||| |||||||||||||| ||||||| ||| || || ||||  ||||||||    
T  40536 ccatacctcttcgctcactcatcaccttataatgagcttttgtgtcctctttatagattctgcaacgacttaccaa 40611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 74; Significance: 5e-34; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 3000 - 3226
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| ||||||||||||| ||||| || || |||| |||||| ||||||||||| ||   | |||    
T  3000 caaacaatctcaacaggagcatctctcctcttgggcctcctctcatcattcaacctctgttttcctttgtcagcaggagcactatacggtttaggatgac 3099  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| ||||  || |||||      || ||||||||||||||||||||| ||||| |||||||| ||||| || || || ||||| ||||| ||  ||||    
T  3100 tctgctgtcatttacctct------acacatcaccttgtaatgagctttagtatcttcttcatatatcctgcagctactcaccaaatcagagaaaattct 3193  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    |||||||||||| ||||| || |||||||||||    
T  3194 tatcttctgatacccaatggctctcttgatgtc 3226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1845 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1845
Description:

Target: scaffold1845; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 1243 - 1007
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| ||||||||||||||||||||| ||| | ||||||||||   ||||||| || |||| |||||| ||||| || |||||   |    
T  1243 gtaacaaacaatctcagcaggagcatctctcctcttgggtctcctatcatcattcatcttctgctttcctttgtcagcaggagcactgtaaggcttagga 1144  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||  |||||||| || || | ||||||||| | ||||||||||||||| || || ||||| |||||||| |||||| ||||||| ||||| |||     
T  1143 cgattcttctgtccctttcccctcctctcactcattatcttgtaatgagctttggtgtcttcttcgtaaatcctgcaactgtttaccaactcagagaaga 1044  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||| |||| |||||| |||||||| ||||| |||||    
T  1043 atctgatctgctgatacccaatagctctcttaatgtc 1007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1426 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold1426
Description:

Target: scaffold1426; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 14 - 250
Target Start/End: Complemental strand, 1546 - 1310
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| |||||||||||||||||| |||||| | |||||| |||   ||||||| || |||| |||||| ||||| || ||||| | |    
T  1546 gtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcactcatcttctgctttcctttgtcagcaggagcactgtaaggcttatga 1447  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||| |||||||| || || | ||||||||| |  |||||||||||||| || || ||||||||||| ||||| ||| | ||||| ||||| |||     
T  1446 cgattctgctgtcccttacccctcctctcactcattatgttgtaatgagctttggtgtcttcttcataaattctacacctgttaaccaactcagagaaga 1347  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     |||||||| |||||| |||||||| || ||||||||    
T  1346 ctcttatctgctgatacccaatagctcttttgatgtc 1310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0518 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0518
Description:

Target: scaffold0518; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 14 - 181
Target Start/End: Original strand, 2196 - 2363
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| ||||||||||||||| ||  ||||| ||||||||||||| || ||||| || |||| || ||||||||| ||||| ||   |    
T  2196 gtaacaaactatctcagcaggagcatctctcctattccgcctcctctcatcattcaacctttgctttcctttgtcagtaggggcactgtacggtttagga 2295  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcata 181  Q
    |||||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| ||||| |||||    
T  2296 cgactctgctgtcccttacctcttcgctcactcatcaccttataatgagcttttgtgtcctcctcata 2363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 8980 - 9215
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    ||||||||||| |||  ||||||||||||||||||||| ||  ||||||||||||   ||||||| || |||| |||||| ||||||||||||||   ||    
T  8980 taacaaacaatctcatcaggagcatctctcctcttgggtcttctctcatcattcagcttctgcttccctttgtcagcaggagcactatacggcttcggac 9079  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    ||||||| ||||| ||||  || || |||||||||||||  ||||||| ||| || ||||| ||||| ||  | || || |||||||||||||| |||||    
T  9080 gactctgctgtcctttgctccttcgatcactcatcacctaataatgagatttcgtgtcctcctcatagattatgcagctacttaccaattcagagaagtt 9179  T
Q  215 tcttatcttctgataaccaatagccctcttgatgtc 250  Q
    | | |||||||| || ||||| || |||||||||||    
T  9180 tttgatcttctggtacccaatggctctcttgatgtc 9215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 70; Significance: 1e-31; HSPs: 2)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 9707 - 9477
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    ||||||||||||| ||||||||||||||| || |||||| ||||||||||||  || ||||| || || | |||| | |||||||| || ||   | |||    
T  9707 caaacaatatcagcaggagcatctctcctgtttggcctcctctcatcattcatcctttgctttcccttatcagcaagagcactatatggtttaggatgac 9608  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| ||||| || ||||| || |||||||||||||||||| |||| || |||||||| ||||  ||||| || || || ||||| ||||| ||| ||||    
T  9607 tctgctgtcctttacctcttcgttcactcatcaccttgtaaagagccttagtatcctcctcat--atcctgcagctactcaccaactcagagaagattct 9510  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
    |||||||||||| ||||| || |||||||||||    
T  9509 tatcttctgatacccaatggctctcttgatgtc 9477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 212
Target Start/End: Complemental strand, 23742 - 23686
Alignment:
Q  156 taatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    |||||||| || |||||||| ||||||||||| |||||||||||||  |||||||||    
T  23742 taatgagccttggtatcctcctcataaatcctgcaactgcttaccagctcagaaaag 23686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 164340 - 164107
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||| |||||| |||||||| ||||||||| ||||||||||||| ||||| || || |||| |||||||||||| || |  ||   |    
T  164340 gtaacaaacgatctcagcaggagcgtctctcctattgggcctcctctcatcattcaacctctgttttcccttgtcagcaggggcactgtatgatttagga 164241  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    |||||||| ||||| || ||||| || |||||||||||||||||||||||||| || | ||| ||||| ||||| || || || ||||| || || ||      
T  164240 cgactctgctgtcctttacctcttcgttcactcatcaccttgtaatgagctttcgtgttctcctcatatatcctgcagctactcaccaactcggagaaaa 164141  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
    |||| ||||||||||| ||||| || ||||||||    
T  164140 ttctgatcttctgatacccaatggctctcttgat 164107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 69; Significance: 5e-31; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 22487 - 22723
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    ||||||||| || |||  ||||||||||||||| ||||||||| |||||||||||| ||| || || || ||||  ||||||||||| || || ||   |    
T  22487 gtaacaaacgatctcaacaggagcatctctcctattgggcctcctctcatcattcagtctttgatttcctttgtcggcaggggcactgtatggtttagga 22586  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
     ||||||  |||||||| || || ||| ||||||||||| | |||||||||||||| ||||| ||||| || || || || |||||||| ||||| ||      
T  22587 agactctactgtcccttaccccttcgcccactcatcaccatataatgagcttttgtgtcctcctcatagattctgcagctacttaccaaatcagagaaaa 22686  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||||||||||||||| ||||| || |||||||||||    
T  22687 ttcttatcttctgatacccaatggctctcttgatgtc 22723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 69; Significance: 5e-31; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 514292 - 514068
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||||   ||| ||| || |||| |||||| ||||| || |||||   |    
T  514292 gtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttcttctttcctttgtcagcaggagcactttaaggcttagga 514193  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| ||||| ||| ||||||| ||||| |||     
T  514192 cgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctacacctgtttaccaactcagagaaga 514093  T
Q  214 ttcttatcttctgataaccaatagc 238  Q
     ||| |||| |||||| ||||||||    
T  514092 ctctgatctgctgatacccaatagc 514068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 151 - 235
Target Start/End: Original strand, 442154 - 442238
Alignment:
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 235  Q
    |||||||||||||||| ||||| || ||||| || ||||| ||||| |||| |||||||||||| |  ||||| ||||| |||||    
T  442154 ccttgtaatgagctttagtatcttcctcatagattctacagctgctcaccagttcagaaaagttacgaatcttatgatacccaat 442238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 14 - 236
Target Start/End: Original strand, 11342 - 11564
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| |||||||||||||||||| || ||| | |||||||||||  ||||||| || |||| |||||| |||||||| |||||   |    
T  11342 gtaacaaacaatctcagaaggagcatctctcctcttaggactcctatcatcattcaaaatctgctttcctttgtcagcaggagcactataaggcttagga 11441  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||| || ||||| || || | ||||||||| | ||||||||||||||| || || || ||||||||||| || ||| ||||||| ||||| |||     
T  11442 cgaatctgctgacccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcctcataaatcctgcagctgtttaccaactcagagaaga 11541  T
Q  214 ttcttatcttctgataaccaata 236  Q
     ||| |||| |||||| ||||||    
T  11542 ctctgatctgctgatacccaata 11564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0203 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0203
Description:

Target: scaffold0203; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 84 - 250
Target Start/End: Complemental strand, 3920 - 3754
Alignment:
Q  84 ttgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaa 183  Q
    |||| |||||| ||||||||||||||   ||||||||| ||||| ||||  || || |||||||||||||||||||||||||| || ||||| ||||| |    
T  3920 ttgtcagcaggagcactatacggcttcggacgactctgctgtcctttgctccttcgatcactcatcaccttgtaatgagctttcgtgtcctcctcataga 3821  T
Q  184 tcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    | || || || |||||||||||||| ||||| || ||||||||||| ||||| || |||||||||||    
T  3820 ttctgcagctacttaccaattcagagaagttcctgatcttctgatacccaatggctctcttgatgtc 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0367 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 8956 - 8724
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| | || || |||||||||||||||||||||| ||||||||||||  |||||||| || ||||  ||||| |||||||| || || | || ||    
T  8956 caaacaatcttagcagaagcatctctcctcttgggcctcctctcatcattcagcctctgctttcccttgtctgcaggagcactatatggtttatgacaac 8857  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||| | ||| || ||||| || |||||||| ||||||| ||||||||| ||||| || ||||| ||||| || || || ||||| ||||| ||  ||||    
T  8856 tctgctatcctttacctcttcgttcactcataaccttgtcatgagctttagtatcttcctcatatatcctgcagctactcaccaactcagagaaaattct 8757  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     | ||||||||| ||||| || |||||||||||    
T  8756 aaccttctgatacccaatggctctcttgatgtc 8724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 250
Target Start/End: Complemental strand, 53342 - 53126
Alignment:
Q  34 gagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcc 133  Q
    ||||||||||||| ||||||||| |||||||||||||||||||||| || |||| |||||||||||| || || ||   ||||   || ||||||||  |    
T  53342 gagcatctctcctattgggcctcctctcatcattcaatctctgctttcccttgtcagcaggggcactgtatggtttaggacgaacttgatgtcccttatc 53243  T
Q  134 tctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 233  Q
    ||| ||||||||||||||||| |||||||| || || || || ||||| ||||| || || || ||||| || || ||| |||| ||||| ||||| |||    
T  53242 tcttcgctcactcatcaccttataatgagccttggtgtcttcctcatatatcctgcagctactcaccaaatccgagaagattctaatcttttgataccca 53143  T
Q  234 atagccctcttgatgtc 250  Q
    || || |||||||||||    
T  53142 atggctctcttgatgtc 53126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0679 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0679
Description:

Target: scaffold0679; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 850 - 748
Alignment:
Q  138 cgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 237  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||| |    
T  850 cgctcactcatcaccttataatgagctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataaccaatgg 751  T
Q  238 ccc 240  Q
    |||    
T  750 ccc 748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 138 - 240
Target Start/End: Original strand, 25949 - 26051
Alignment:
Q  138 cgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 237  Q
    ||||||||||||||||| ||||||||||| ||||| || |||||||||||||| || || ||||| |||||||||||||| ||||||||||||||||| |    
T  25949 cgctcactcatcaccttataatgagctttggtatcatcctcataaatcctacagctactcaccaactcagaaaagtttctaatcttctgataaccaatgg 26048  T
Q  238 ccc 240  Q
    |||    
T  26049 ccc 26051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0706 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 5144 - 4912
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||| |||||||||||||||| | |||| | |||||| |||||  || ||||| || |||| |||||| |||||||| || ||   |||||    
T  5144 caaacaatctcagcaggagcatctctcctcctaggccacctctcattattcagcctttgctttcccttgtcagcaggagcactatatggtttaggacgac 5045  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    |||  | ||| || ||||| || |||||||||||||||||||||||||| || || || ||||| ||| | || || || ||||||||||| ||  ||||    
T  5044 tctactttcctttacctcttcgttcactcatcaccttgtaatgagctttagtgtcttcctcatatatcatgcagctactcaccaattcagagaaaattct 4945  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||||||||| ||||| || |||||||||||    
T  4944 aatcttctgatacccaatggctctcttgatgtc 4912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 14 - 250
Target Start/End: Original strand, 826 - 1062
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| |||||||||||||||||| |||||| | |||||| ||||  ||| ||| || |||| |||||| ||||| || |||||   |    
T  826 gtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcaatcaacttctactttcctttgtcagcaggagcactgtaaggcttagga 925  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||| |||||||| || || | ||||||||| | ||||||||||||||| || || ||||||||||| || || ||| | ||||| ||||| |||     
T  926 cgattctgctgtcccttacccctcctctcactcattatcttgtaatgagctttggtgtcttcttcataaattctgcatctgttaaccaactcagagaaga 1025  T
Q  214 ttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    |||| |||| ||||||   |||||| || ||||||||    
T  1026 ttctgatctgctgatactgaatagctcttttgatgtc 1062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 51 - 211
Target Start/End: Complemental strand, 16511 - 16351
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| ||||||||||||  || |||||||| || | |||||| |||||||| ||||||  ||||||||| || | ||| || || ||||||||||| |    
T  16511 ggcctcctctcatcattcaccctttgcttacctttatcagcaggagcactataaggctttggacgactctgctgactcttacccctccgctcactcataa 16412  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 211  Q
    |||||||||||||||| ||||| || ||||| ||||| ||||| || ||||||||||||||    
T  16411 ccttgtaatgagctttggtatcttcctcatagatcctgcaacttctcaccaattcagaaaa 16351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 211
Target Start/End: Original strand, 7922 - 8119
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| ||||||||| |||| || ||||| || ||| |||||||||||||||||||||  || |||| | |||| ||||| || |||||   |    
T  7922 gtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgctctcctttgtcaacaggagcactgtagggcttcgga 8021  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 211  Q
    ||||  || || ||||||   || ||||||||| | ||||| |||||||| || |||||||| |||||||| |||||||| || ||||||||||||||    
T  8022 cgaccttgctgacccttgttcctccgctcactcctaaccttataatgagccttcgtatcctcctcataaattctacaactactcaccaattcagaaaa 8119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 14 - 78
Target Start/End: Original strand, 1304 - 1368
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgct 78  Q
    |||||||||||| ||||||||| |||| || ||||| || ||| |||||||||||||||||||||    
T  1304 gtaacaaacaatctcagtaggaacatcccttctcttaggtctcctctcatcattcaatctctgct 1368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 15 - 244
Target Start/End: Complemental strand, 67046 - 66817
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    ||||||||||| || | ||||||||||||||||||||| ||| | ||||||||||   ||| ||| || |||| | |||| ||||| || |||||   ||    
T  67046 taacaaacaatctcggaaggagcatctctcctcttgggtctcctatcatcattcatcatctactttcctttgtcaacaggagcactgtaaggcttaggac 66947  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    || |||| ||||||||||| || | ||||||||| | ||||||||||||||| || || || ||||||||||| || ||| ||||||| ||||| ||       
T  66946 gattctgctgtcccttgcccctcctctcactcattatcttgtaatgagctttggtgtcttcctcataaatcctgcagctgtttaccaaatcagagaacac 66847  T
Q  215 tcttatcttctgataaccaatagccctctt 244  Q
    ||| |||| |||||| |||||||| |||||    
T  66846 tctgatctgctgatacccaatagctctctt 66817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0586 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0586
Description:

Target: scaffold0586; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 150 - 250
Target Start/End: Original strand, 67 - 167
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgt 249  Q
    ||||| || |||||| | ||||||||||||||||||||||  |||||||||||||||||||| ||||| |||||||||||||| || || ||||||||||    
T  67 accttatagtgagctctcgtatcctcttcataaatcctactgctgcttaccaattcagaaaaatttctaatcttctgataacctatggctctcttgatgt 166  T
Q  250 c 250  Q
    |    
T  167 c 167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 51 - 247
Target Start/End: Complemental strand, 57516 - 57320
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||||| ||| |||||||| || | |||||| ||||| || ||||||  |||||| || || || |||||| | |||||| |||  |    
T  57516 ggcctcctctcatcattcattctttgcttacccttatcagcaggagcactgtaaggctttggacgactttgctgacctttgcctttccgctcattcacaa 57417  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||| || ||||| || ||||| || ||||||||||| ||||  ||||||||||| |  |||||||| |||||||| |||| ||||||    
T  57416 ccttgtaatgagccttagtatcttcctcatatattctacaactgctcaccagctcagaaaagttacggatcttctggtaaccaattgcccgcttgat 57320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 202
Target Start/End: Complemental strand, 30264 - 30077
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaac 114  Q
    ||||||||||| |||| |||||||||| |||||||||||||| | ||||||||||   |||| || || |||| |||||| ||||| || || ||   ||    
T  30264 taacaaacaatctcagcaggagcatctttcctcttgggcctcctgtcatcattcatcttctgtttccctttgtcagcaggagcactgtaaggtttaggac 30165  T
Q  115 gactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaa 202  Q
    || |||||| |||||| || || | ||||||||| | || ||||||||||||||| ||||| ||||| ||||| || |||||||||||    
T  30164 gattctgttatcccttacccctcctctcactcattatctagtaatgagcttttgtgtcctcctcatatatcctgcagctgcttaccaa 30077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 247
Target Start/End: Original strand, 252004 - 252217
Alignment:
Q  34 gagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcc 133  Q
    ||||||||||||||||||||||| | ||||||||||   | || || ||  ||  |||||| ||||| || || ||   |||| | ||||||||||| ||    
T  252004 gagcatctctcctcttgggcctcctatcatcattcatcttatgttttcctgtggcagcaggagcactgtaaggtttaggacgattatgttgtcccttacc 252103  T
Q  134 tctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataacca 233  Q
     || | ||||||||||||||||||||||||||| || || || ||||| ||||| || ||||||||||||||||| ||  |||| ||||||||||| | |    
T  252104 cctcctctcactcatcaccttgtaatgagctttggtgtcttcctcatatatcctgcagctgcttaccaattcagagaaaattctaatcttctgataccta 252203  T
Q  234 atagccctcttgat 247  Q
    ||||| || |||||    
T  252204 atagctcttttgat 252217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1914 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold1914
Description:

Target: scaffold1914; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 51 - 187
Target Start/End: Complemental strand, 1132 - 996
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||| | |||||||||||| || | ||| |||||||||||||| ||   |||| |||| |||||||| ||||| ||||||||| |||    
T  1132 ggcctcctctcatcattaagtctctgcttacccttatcagccggggcactatacggtttaggacgattctgatgtcccttacctcttcgctcactcttca 1033  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcct 187  Q
    |||| ||||||||||| || ||||| ||||| |||||    
T  1032 ccttataatgagctttggtgtcctcctcatagatcct 996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 138 - 240
Target Start/End: Complemental strand, 30843 - 30741
Alignment:
Q  138 cgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatag 237  Q
    ||||||| ||| ||||||||||||||||| ||||||||||| || || ||||||||||| |||||||||||||| |  || ||| ||||||||||||| |    
T  30843 cgctcacacataaccttgtaatgagctttggtatcctcttcgtagattctacaactgctcaccaattcagaaaattgcctaatcctctgataaccaatgg 30744  T
Q  238 ccc 240  Q
    |||    
T  30743 ccc 30741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0429 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0429
Description:

Target: scaffold0429; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 14 - 247
Target Start/End: Complemental strand, 1361 - 1128
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||  |||||||||   ||| |||||||||| | | ||||||||||||  ||||||| ||| || | |||||| | ||| || ||||||  |    
T  1361 gtaacaaacaacttcagtaggattctctttcctcttgggtcccctctcatcattcaccctctgctcacccttatcagcaggagtactgtaaggctttgga 1262  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| ||||||| | ||| ||| | | ||||||||   |||||| ||||||||| |||||||| ||||| || || |||||||| |||| || ||||||||    
T  1261 cgattctgttgactcttacctttcctctcactcacagccttgtgatgagctttcgtatcctcctcatagattctgcaactgctcaccagtttagaaaagt 1162  T
Q  214 ttcttatcttctgataaccaatagccctcttgat 247  Q
    | |  ||||||||||| ||||  |||||||||||    
T  1161 taccgatcttctgatatccaacggccctcttgat 1128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270 (Bit Score: 50; Significance: 1e-19; HSPs: 2)
Name: scaffold0270
Description:

Target: scaffold0270; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 7242 - 7471
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  |||||||||| || |  | |||||| |||||||||||| ||| |||||||| || | |||||| ||||| || ||||||   ||||    
T  7242 caaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgcttacccttatcagcaggagcactgtaaggctttggtcgac 7341  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    | || || | ||||||| | |||||| |||  |||||||||||||| || ||||| || ||||| ||||| |||||||| ||||  |||||||| || |     
T  7342 tttgctgactcttgcctttccgctcattcacaaccttgtaatgagccttagtatcttcctcatatatcctgcaactgctcaccagctcagaaaaattacg 7441  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
     |||||||| |||||||| |||| ||||||    
T  7442 gatcttctggtaaccaattgcccgcttgat 7471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0270; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 247
Target Start/End: Original strand, 14372 - 14601
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  |||||||||| || |  | |||||| |||||||||||| ||| |||||||| || | |||||| ||||| || ||||||   ||||    
T  14372 caaacaatctcaacaggagcatctttctttctaggcctcctctcatcattcattctttgcttacccttatcagcaggagcactgtaaggctttggtcgac 14471  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    | || || | ||||||| | |||||| |||  |||||||||||||| || ||||| || ||||| ||||| |||||||| ||||  |||||||| || |     
T  14472 tttgctgactcttgcctttccgctcattcacaaccttgtaatgagccttagtatcttcctcatatatcctgcaactgctcaccagctcagaaaaattacg 14571  T
Q  218 tatcttctgataaccaatagccctcttgat 247  Q
     |||||||| |||||||| |||| ||||||    
T  14572 gatcttctggtaaccaattgcccgcttgat 14601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 73 - 250
Target Start/End: Original strand, 30334 - 30511
Alignment:
Q  73 tctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatc 172  Q
    ||||||| || |||| |||||| ||||| || |||||   ||||||||| ||||||||||| || | |||||||||   ||||||||||||||| || ||    
T  30334 tctgctttcctttgtcagcaggagcactgtaaggcttaggacgactctgctgtcccttgcccctcctctcactcattgtcttgtaatgagctttggtgtc 30433  T
Q  173 ctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     ||||||||||| || |||||| | ||||| ||||| |||  ||| |||| |||||| |||||||| || ||||||||    
T  30434 ttcttcataaattctgcaactgttaaccaactcagagaagactctgatctgctgatacccaatagctctattgatgtc 30511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2165 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold2165
Description:

Target: scaffold2165; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 238
Target Start/End: Complemental strand, 742 - 518
Alignment:
Q  14 gtaacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaa 113  Q
    |||||||||||| |||| |||||||||||||||||| |||||| | ||||||||||   ||||||| || |||| |  ||| ||||| || |||||   |    
T  742 gtaacaaacaatctcagaaggagcatctctcctcttaggcctcctatcatcattcatcttctgctttcctttgtcaataggagcactgtaaggcttagga 643  T
Q  114 cgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagt 213  Q
    ||| |||| |||||||| || || | || |||||| | |||||||| | |||| || || ||||||||||| ||||| ||| | ||||| ||||| |||     
T  642 cgattctgctgtcccttacccctcctctaactcattatcttgtaataaactttggtgtcttcttcataaattctacacctgttaaccaactcagagaaga 543  T
Q  214 ttcttatcttctgataaccaatagc 238  Q
     ||| |||| |||||| ||||||||    
T  542 ctctaatctgctgatacccaatagc 518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0276 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 18 - 250
Target Start/End: Complemental strand, 23858 - 23626
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || |||||   |||||    
T  23858 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgac 23759  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||| ||| || || |||||||| || || || ||  | ||||| ||||| |||  |||    
T  23758 tctgttgtcccttacccctcctctcactcataatcttataatgagttttggtgtcttcttcatagattctgcacctattaaccaactcagagaagactct 23659  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  23658 gatctgctgatacccaatagctcttttgatgtc 23626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0708 (Bit Score: 46; Significance: 2e-17; HSPs: 1)
Name: scaffold0708
Description:

Target: scaffold0708; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 5083 - 4998
Alignment:
Q  15 taacaaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcact 100  Q
    ||||||||||| |||| ||||||||||||||||||||||||| | ||||||||||  |||||||| || |||| |||||| |||||    
T  5083 taacaaacaatttcagcaggagcatctctcctcttgggcctcctatcatcattcatcctctgcttccctttgtcagcaggagcact 4998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1274 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold1274
Description:

Target: scaffold1274; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 247
Target Start/End: Original strand, 20 - 215
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||||||||| |||||||| || | |||||| ||||| || ||||||  |||||| || || || |||||| | | |||| |||  |    
T  20 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgtaaggctttggacgactttgctgacc-ttgcctttcctctcattcacaa 118  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||||||||||| ||||| || ||||| ||  | |||||||| ||||  ||||||||||| |  || ||||| |||||||| |||| ||||||    
T  119 ccttgtaatgagctttggtatcttcctcatagattttgcaactgctcaccagctcagaaaagttacggattttctggtaaccaattgcccgcttgat 215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 250
Target Start/End: Original strand, 42104 - 42336
Alignment:
Q  18 caaacaatatcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgac 117  Q
    |||||||| |||  ||||||||||||||||||||||||| | ||||||  ||   ||||||| || |||| |||||| ||||| || |||||   ||||     
T  42104 caaacaatctcaacaggagcatctctcctcttgggcctcctatcatcacccatcttctgctttcctttgtcagcaggagcactgtaaggcttaggacgat 42203  T
Q  118 tctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttct 217  Q
    ||||||||||||| || || | ||||||||| | ||| ||||||||||| || || |||||||| || || || ||  | ||||| ||||| |||  | |    
T  42204 tctgttgtcccttacccctcctctcactcataatcttataatgagctttggtgtcttcttcatagattctgcacctattaaccaactcagagaagacttt 42303  T
Q  218 tatcttctgataaccaatagccctcttgatgtc 250  Q
     |||| |||||| |||||||| || ||||||||    
T  42304 gatctgctgatacccaatagctcttttgatgtc 42336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 17703 - 17834
Alignment:
Q  113 acgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    ||||||||| |||||||| || || | ||||||||| | ||| ||||||||||| || || ||||||||||| || |||||| ||||||| ||||| |||    
T  17703 acgactctgctgtcccttacccctcctctcactcattatcttataatgagctttggtgtcttcttcataaattctgcaactgtttaccaactcagagaag 17802  T
Q  213 tttcttatcttctgataaccaatagccctctt 244  Q
      ||| |||| |||||| |||||||| |||||    
T  17803 actctgatctgctgatacccaatagctctctt 17834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0507 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 247
Target Start/End: Original strand, 11468 - 11626
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatccta 188  Q
    ||||||||||||||| |||||   |||||| || || ||||||||| | | |||| |||  |||||||||||||| || ||||| || ||||| || ||     
T  11468 agcaggggcactataaggcttgggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatgagccttagtatcttcctcatatattctg 11567  T
Q  189 caactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||| ||||  ||||||||||| |  |||||||| |||||||| |||| ||||||    
T  11568 caactgctcaccagctcagaaaagttacggatcttctggtaaccaattgcccgcttgat 11626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 247
Target Start/End: Complemental strand, 216311 - 216126
Alignment:
Q  62 atcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatga 161  Q
    |||||||||||| |||||||| || | |||||| ||||| || ||||||  |||||| || || ||||||||| | | |||| |||  ||||||||||||    
T  216311 atcattcaatctttgcttacccttatcagcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaaccttgtaatga 216212  T
Q  162 gcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    || || |||||||  ||||| ||  | |||||||| | ||  ||||||||||| |  |||||||| |||||||| |||| ||||||    
T  216211 gccttagtatccttctcatatattatgcaactgctcagcagctcagaaaagttacggatcttctggtaaccaattgcccacttgat 216126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 58 - 247
Target Start/End: Original strand, 104635 - 104824
Alignment:
Q  58 tctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 157  Q
    |||||||| ||| |||||| || || || | |||||| |||||||| ||||||  ||||||||| || || ||| || | |||||| |||  | ||||||    
T  104635 tctcatcaatcattctctgttttcccttatcagcaggagcactataaggctttggacgactctgctgacctttgacttttcgctcattcacaatcttgta 104734  T
Q  158 atgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||  || |||||||| ||||||||||| |||||||| ||||  ||||||||  | |  |||||||| |||||||| |||| ||||||    
T  104735 atgagtcttagtatcctcctcataaatcctgcaactgctcaccagctcagaaaaagtacggatcttctggtaaccaattgcccgcttgat 104824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0282
Description:

Target: scaffold0282; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 247
Target Start/End: Complemental strand, 9922 - 9828
Alignment:
Q  153 ttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||| ||||| |||||||||||||| || || |||||||| || ||||||| |||||| |  ||||||||||| ||||| |||| ||||||    
T  9922 ttgtaatgtgctttggtatcctcttcatagattctgcaactgctcactaattcagtaaagttacggatcttctgatatccaattgcccgcttgat 9828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0282; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 51 - 214
Target Start/End: Complemental strand, 13376 - 13213
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||||||||| |||||||| || | |||||| |||||  | | ||||  || ||| || || ||||||||| | | |||| |||  |    
T  13376 ggcctcctctcatcattcaatctttgcttacccttatcagcaggagcactgcaagactttggacaactttgctgacccttgcctttcctctcattcacaa 13277  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtt 214  Q
    ||| |||| |||| || ||||| || ||||| || ||||||||||| ||||  |||||||||||    
T  13276 cctcgtaacgagccttagtatcttcctcatatattctacaactgctcaccagctcagaaaagtt 13213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 27 - 105
Target Start/End: Original strand, 12322 - 12400
Alignment:
Q  27 tcagtaggagcatctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacg 105  Q
    ||||||||||||||||||||||  |||||| ||||||||||||  ||||| ||| | |||| |||||| ||||||||||    
T  12322 tcagtaggagcatctctcctctaaggcctcctctcatcattcagcctctgtttatctttgtcagcaggagcactatacg 12400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 5589 - 5686
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||||||| ||||| || ||||| || || |||||||| |||| |||||||||||  |  ||||||||||| ||||| |||| ||||||    
T  5589 accttgtaatgagctttcgtatcttcctcatagattctgcaactgctcaccagttcagaaaagtcacggatcttctgatatccaatggcccacttgat 5686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0457 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0457
Description:

Target: scaffold0457; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 73 - 250
Target Start/End: Complemental strand, 13934 - 13757
Alignment:
Q  73 tctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatc 172  Q
    ||||||| || |||| |||||| ||||| || |||||   |||| |||| |||||||| || || | ||||||||| | ||| ||||||||||| || ||    
T  13934 tctgctttcctttgtcagcaggagcactgtaaggcttaggacgattctgctgtcccttacccctcctctcactcattatcttttaatgagctttggtgtc 13835  T
Q  173 ctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
     |||||||| || ||||| ||| | ||||| ||||| |||  ||| |||| |||||| | |||||| |||||||||||    
T  13834 ttcttcatagattctacacctgttaaccaactcagagaagactctgatctgctgatatctaatagctctcttgatgtc 13757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1600 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold1600
Description:

Target: scaffold1600; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 51 - 247
Target Start/End: Original strand, 468 - 664
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    |||||| |||||||||||| ||| || ||||| || | |||||| || || || ||||||   ||||| || || ||||| ||| | | ||||||||       
T  468 ggcctcctctcatcattcactctttgtttacccttatcagcaggagcgctgtaaggctttgggcgactttgctgacccttacctttcctctcactcacag 567  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||||||||||| |||||||| ||||| |  || |||||||  |||| |||||||||||| |  ||||| ||||| ||||| ||| |||||||    
T  568 ccttgtaatgagctttagtatcctcctcatagactctgcaactgcacaccagttcagaaaagttacggatcttttgatatccaatggccatcttgat 664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 151 - 247
Target Start/End: Original strand, 18347 - 18443
Alignment:
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||||||||||| ||||| ||||||||||| || ||||| || ||||  ||| ||||||| |  |||||||| |||||||| |||| ||||||    
T  18347 ccttgtaatgagctttggtatcttcttcataaattctgcaactactcaccagctcaaaaaagttacggatcttctggtaaccaattgcccgcttgat 18443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0605 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0605
Description:

Target: scaffold0605; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 205
Target Start/End: Original strand, 1775 - 1836
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattc 205  Q
    ||||||||||| |||||||| ||||||||||| |||||||| ||||| || || ||||||||    
T  1775 ctcatcaccttataatgagcctttgtatcctcctcataaattctacagctactcaccaattc 1836  T

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Target: scaffold0505 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0505
Description:

Target: scaffold0505; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 211
Target Start/End: Original strand, 2252 - 2313
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaa 211  Q
    ||||||||||||||||| |||||||| ||||| || || ||||| || ||||||||||||||    
T  2252 accttgtaatgagctttcgtatcctcctcatagattctgcaactactcaccaattcagaaaa 2313  T

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Target: scaffold0293 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 15911 - 15996
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaat 235  Q
    |||||||||||||| || |||||||| ||||| || || |||||||| ||||| |||||||| || |  |||||||| ||||||||    
T  15911 accttgtaatgagccttagtatcctcctcatagattctgcaactgctcaccaactcagaaaaattacggatcttctggtaaccaat 15996  T

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Target: scaffold0029 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 93703 - 93618
Alignment:
Q  144 ctcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgata 229  Q
    |||||||||||||||||||| || |||||||| |||||||| || || || || |||||||| || ||  |||| |||||||||||    
T  93703 ctcatcaccttgtaatgagccttcgtatcctcctcataaattctgcagctactcaccaattctgagaaaattctgatcttctgata 93618  T

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Target: scaffold0018 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 151 - 236
Target Start/End: Complemental strand, 9153 - 9068
Alignment:
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaata 236  Q
    |||||||||||||||| ||||| || ||||| || || |||||||| |||| |||||||||||  |  ||||||||||| ||||||    
T  9153 ccttgtaatgagctttagtatcttcctcatagattctgcaactgctcaccagttcagaaaagtaacggatcttctgatacccaata 9068  T

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Target: scaffold0018; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 151 - 247
Target Start/End: Complemental strand, 23100 - 23004
Alignment:
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    |||||||||||||||| ||||| || ||||| ||  | || || || ||||| ||||||||||| |  ||||| ||||| ||||| |||||||||||    
T  23100 ccttgtaatgagctttagtatcttcctcatagattttgcagctactcaccaactcagaaaagttacggatcttttgatacccaatggccctcttgat 23004  T

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Target: scaffold0130 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 3808 - 3736
Alignment:
Q  37 catctctcctcttgggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggctt 109  Q
    ||||||||||||| || ||| |||||||||||||||| || || || |||| |||||| |||||||| |||||    
T  3808 catctctcctcttaggtctcctctcatcattcaatctttgtttccccttgtcagcaggagcactatagggctt 3736  T

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Target: scaffold0130; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 190
Target Start/End: Complemental strand, 7582 - 7542
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctaca 190  Q
    ||||||||||||||| | |||||||||||||| ||||||||    
T  7582 accttgtaatgagctctggtatcctcttcatagatcctaca 7542  T

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Target: scaffold0947 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0947
Description:

Target: scaffold0947; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 195 - 250
Target Start/End: Complemental strand, 1307 - 1252
Alignment:
Q  195 cttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgatgtc 250  Q
    ||||||||  |||| |||||||| ||||||||||||||||| || |||||||||||    
T  1307 cttaccaacccagagaagtttctaatcttctgataaccaatggctctcttgatgtc 1252  T

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Target: scaffold0395 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 16306 - 16232
Alignment:
Q  170 atcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctctt 244  Q
    |||||| || |||||||| |||||||| ||||  |||||||||||||  |||||||| |||||||| || |||||    
T  16306 atcctcctcgtaaatcctgcaactgctcaccagctcagaaaagtttcgaatcttctggtaaccaattgctctctt 16232  T

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Target: scaffold0324 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0324
Description:

Target: scaffold0324; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 235
Target Start/End: Original strand, 2453 - 2575
Alignment:
Q  113 acgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    |||||||||||| |||||| |  | |||||| |||  | |||||||||||  || |||||||| || |||||||| |||||||| ||||  |||||||||    
T  2453 acgactctgttgacccttggcctttcgctcattcacaatcttgtaatgagtcttggtatcctcctcgtaaatcctgcaactgctcaccagctcagaaaag 2552  T
Q  213 tttcttatcttctgataaccaat 235  Q
      ||  |||||||| ||||||||    
T  2553 actcggatcttctggtaaccaat 2575  T

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Target: scaffold0273 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 208
Target Start/End: Original strand, 541 - 599
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcaga 208  Q
    |||||||||||||| || || ||||| ||||||||||| |||||||| ||||| |||||    
T  541 accttgtaatgagccttagtgtcctcctcataaatcctgcaactgctcaccaactcaga 599  T

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Target: scaffold0075 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 58 - 212
Target Start/End: Original strand, 48139 - 48293
Alignment:
Q  58 tctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgta 157  Q
    ||||||||  || |||||| ||||| || | |||||| ||||| || |||||   ||||||||| || || ||| || | |||||| |||  | ||||||    
T  48139 tctcatcaaccattctctgtttacccttatcagcaggagcactgtaaggcttaggacgactctgctgacctttggcttttcgctcattcacaatcttgta 48238  T
Q  158 atgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    |||||  || |||||||| |||||||| || |||||||| ||||| |||||||||    
T  48239 atgagtcttggtatcctcctcataaattctgcaactgctcaccaactcagaaaag 48293  T

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Target: scaffold0075; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 55272 - 55212
Alignment:
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaag 212  Q
    |||||||||||  || |||||||| |||||||| || |||||||| ||||| |||||||||    
T  55272 cttgtaatgagtcttggtatcctcctcataaattctgcaactgctcaccaactcagaaaag 55212  T

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Target: scaffold1423 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1423
Description:

Target: scaffold1423; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 201
Target Start/End: Complemental strand, 179 - 130
Alignment:
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactgcttacca 201  Q
    |||||||||||| || |||||||| ||||||||||| |||||||| ||||    
T  179 cttgtaatgagccttagtatcctcatcataaatcctgcaactgctcacca 130  T

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Target: scaffold0071 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 2732 - 2781
Alignment:
Q  152 cttgtaatgagcttttgtatcctcttcataaatcctacaactgcttacca 201  Q
    |||||||||||  ||||||||||| ||||||||||| |||||||| ||||    
T  2732 cttgtaatgagtctttgtatcctcctcataaatcctgcaactgctcacca 2781  T

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Target: scaffold0042 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 150 - 247
Target Start/End: Original strand, 26853 - 26950
Alignment:
Q  150 accttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||||||| ||||  || ||||| || || |||||||| |||| ||||||||| || |  ||||| | ||| ||||| |||||||||||    
T  26853 accttgtaatgagctttcgtatattcctcatagattctgcaactgctcaccagttcagaaaatttacgaatctttttatatccaatggccctcttgat 26950  T

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Target: scaffold0403 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 201
Target Start/End: Original strand, 15351 - 15463
Alignment:
Q  89 agcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcataaatccta 188  Q
    ||||||||||||||| |||||    ||||||||||| |||||  || | |||||| |||  | |||||||||||  || |||||||| ||||| |||||     
T  15351 agcaggggcactataaggcttagggcgactctgttgacccttagctttccgctcattcacaatcttgtaatgagtcttggtatcctcctcatagatcctg 15450  T
Q  189 caactgcttacca 201  Q
    |||||||| ||||    
T  15451 caactgctcacca 15463  T

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Target: scaffold0342 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0342
Description:

Target: scaffold0342; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 51 - 247
Target Start/End: Complemental strand, 14167 - 13971
Alignment:
Q  51 ggcctcttctcatcattcaatctctgcttaccattgttagcaggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatca 150  Q
    ||||||||||||||||| | ||| || || || || | | |||| ||||| || ||||||  |||||| || || ||||||||| | | |||| |||  |    
T  14167 ggcctcttctcatcatttattctttgttttcccttatcatcaggagcactgtaaggctttggacgactttgctgacccttgcctttcctctcattcacaa 14068  T
Q  151 ccttgtaatgagcttttgtatcctcttcataaatcctacaactgcttaccaattcagaaaagtttcttatcttctgataaccaatagccctcttgat 247  Q
    ||||||||||||| || ||||| || ||||| || || |||||||| ||||  | |||||||||    ||||| || |||||||| |||| ||||||    
T  14067 ccttgtaatgagccttagtatcttcctcatatattctgcaactgctcaccagcttagaaaagttatggatcttttggtaaccaattgcccgcttgat 13971  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 93 - 181
Target Start/End: Original strand, 3865 - 3953
Alignment:
Q  93 ggggcactatacggcttttaacgactctgttgtcccttgcctctacgctcactcatcaccttgtaatgagcttttgtatcctcttcata 181  Q
    |||||||| ||||||||   ||||||||| |||||||||||  | | |||| |||  |||||||| ||||| || ||||||||||||||    
T  3865 ggggcactgtacggcttaggacgactctgctgtcccttgcccttcctctcattcactaccttgtagtgagccttcgtatcctcttcata 3953  T

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