View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6743_low_28 (Length: 216)

Name: NF6743_low_28
Description: NF6743
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6743_low_28
NF6743_low_28
[»] chr3 (39 HSPs)
chr3 (7-158)||(31730779-31730930)
chr3 (6-156)||(3457076-3457232)
chr3 (6-126)||(54706551-54706677)
chr3 (35-156)||(105906-106027)
chr3 (59-126)||(53155325-53155392)
chr3 (20-156)||(53402758-53402900)
chr3 (59-126)||(1074789-1074856)
chr3 (6-126)||(31270493-31270619)
chr3 (59-156)||(48652335-48652432)
chr3 (42-126)||(3961640-3961724)
chr3 (56-156)||(11819220-11819320)
chr3 (59-143)||(19861174-19861258)
chr3 (59-143)||(31462641-31462725)
chr3 (59-114)||(13701896-13701951)
chr3 (59-126)||(33637570-33637637)
chr3 (35-126)||(47733748-47733839)
chr3 (59-126)||(55455032-55455099)
chr3 (80-158)||(40401417-40401495)
chr3 (7-114)||(48401041-48401154)
chr3 (59-126)||(14585629-14585696)
chr3 (59-126)||(22485132-22485199)
chr3 (59-126)||(36624590-36624657)
chr3 (59-114)||(48855056-48855111)
chr3 (59-126)||(49627990-49628057)
chr3 (16-126)||(53962285-53962395)
chr3 (20-122)||(32080604-32080712)
chr3 (56-156)||(30156173-30156273)
chr3 (59-110)||(19645374-19645425)
chr3 (6-154)||(24483515-24483669)
chr3 (71-126)||(35174875-35174930)
chr3 (59-126)||(40883761-40883828)
chr3 (80-115)||(41598381-41598416)
chr3 (35-126)||(48212507-48212598)
chr3 (71-125)||(40013179-40013233)
chr3 (80-122)||(48822245-48822287)
chr3 (37-126)||(2147924-2148012)
chr3 (82-123)||(47272657-47272698)
chr3 (69-125)||(25135216-25135272)
chr3 (59-143)||(36691694-36691778)
[»] chr7 (53 HSPs)
chr7 (7-158)||(6496027-6496178)
chr7 (20-114)||(14657699-14657793)
chr7 (35-143)||(38276994-38277102)
chr7 (35-114)||(21954681-21954760)
chr7 (35-126)||(25112679-25112770)
chr7 (59-156)||(45482201-45482298)
chr7 (20-123)||(4621215-4621318)
chr7 (59-126)||(10094608-10094675)
chr7 (35-126)||(37714646-37714737)
chr7 (59-124)||(39532862-39532927)
chr7 (6-156)||(42644809-42644965)
chr7 (59-126)||(9719860-9719927)
chr7 (59-126)||(11833185-11833252)
chr7 (59-126)||(21603627-21603694)
chr7 (59-126)||(28664828-28664895)
chr7 (35-126)||(29352393-29352484)
chr7 (59-125)||(9785485-9785551)
chr7 (20-126)||(39707452-39707557)
chr7 (62-156)||(48304283-48304377)
chr7 (53-118)||(10623973-10624038)
chr7 (62-143)||(24320113-24320194)
chr7 (59-156)||(42603656-42603753)
chr7 (59-156)||(46025916-46026013)
chr7 (59-126)||(1281024-1281091)
chr7 (59-114)||(2622771-2622826)
chr7 (59-114)||(3266565-3266620)
chr7 (59-126)||(24988367-24988434)
chr7 (71-158)||(37375930-37376017)
chr7 (59-114)||(41288135-41288190)
chr7 (59-114)||(45457443-45457498)
chr7 (80-114)||(4028360-4028394)
chr7 (59-128)||(26161116-26161185)
chr7 (59-123)||(40761758-40761822)
chr7 (38-114)||(43256416-43256492)
chr7 (53-112)||(5238134-5238193)
chr7 (59-114)||(5684543-5684598)
chr7 (59-114)||(5709593-5709648)
chr7 (87-158)||(9137543-9137614)
chr7 (59-114)||(10574560-10574615)
chr7 (59-126)||(17509091-17509158)
chr7 (59-126)||(17544056-17544123)
chr7 (59-126)||(21990829-21990896)
chr7 (80-123)||(22493204-22493247)
chr7 (71-126)||(27050362-27050417)
chr7 (87-126)||(27704985-27705024)
chr7 (59-110)||(32740935-32740986)
chr7 (59-114)||(36253109-36253164)
chr7 (16-125)||(25531620-25531730)
chr7 (59-156)||(6667532-6667629)
chr7 (29-126)||(46881346-46881443)
chr7 (22-114)||(9137135-9137227)
chr7 (48-128)||(17223298-17223378)
chr7 (59-111)||(36719439-36719491)
[»] chr4 (58 HSPs)
chr4 (6-126)||(8712697-8712817)
chr4 (20-126)||(5814513-5814619)
chr4 (6-156)||(13965697-13965853)
chr4 (20-112)||(56236670-56236762)
chr4 (7-126)||(3159161-3159280)
chr4 (59-156)||(6911817-6911914)
chr4 (59-156)||(7861093-7861190)
chr4 (59-128)||(22757259-22757328)
chr4 (59-145)||(394161-394247)
chr4 (20-143)||(7060473-7060602)
chr4 (20-126)||(31522113-31522225)
chr4 (59-156)||(53647769-53647866)
chr4 (59-143)||(20887644-20887727)
chr4 (60-156)||(25658304-25658400)
chr4 (59-126)||(13586127-13586194)
chr4 (59-126)||(20399790-20399857)
chr4 (71-126)||(24789356-24789411)
chr4 (71-126)||(24818848-24818903)
chr4 (59-126)||(32616746-32616813)
chr4 (59-126)||(36124235-36124302)
chr4 (35-114)||(40198408-40198487)
chr4 (59-126)||(43244268-43244335)
chr4 (59-156)||(30202175-30202272)
chr4 (8-126)||(50801384-50801508)
chr4 (71-143)||(2447950-2448022)
chr4 (62-126)||(42197720-42197784)
chr4 (59-126)||(24825816-24825883)
chr4 (59-126)||(27394997-27395064)
chr4 (80-126)||(11210221-11210267)
chr4 (60-126)||(38944036-38944102)
chr4 (80-126)||(56062156-56062202)
chr4 (59-156)||(477899-477996)
chr4 (59-156)||(24568600-24568697)
chr4 (59-156)||(39837732-39837829)
chr4 (59-143)||(6882106-6882190)
chr4 (59-111)||(24611687-24611739)
chr4 (59-111)||(26674554-26674606)
chr4 (59-127)||(27090889-27090957)
chr4 (62-126)||(43278101-43278165)
chr4 (59-114)||(626437-626492)
chr4 (59-110)||(7083699-7083750)
chr4 (47-126)||(12716992-12717071)
chr4 (71-114)||(12754342-12754385)
chr4 (20-156)||(19745526-19745668)
chr4 (20-156)||(19794138-19794280)
chr4 (35-114)||(22621610-22621689)
chr4 (59-114)||(24100319-24100374)
chr4 (59-126)||(26742350-26742417)
chr4 (59-114)||(29923014-29923069)
chr4 (59-114)||(51152303-51152358)
chr4 (16-114)||(13169285-13169383)
chr4 (80-126)||(29268685-29268731)
chr4 (71-125)||(43493186-43493240)
chr4 (59-128)||(28837230-28837299)
chr4 (81-122)||(45681836-45681877)
chr4 (7-116)||(54548973-54549082)
chr4 (35-115)||(6082287-6082367)
chr4 (59-126)||(39523576-39523644)
[»] chr6 (29 HSPs)
chr6 (6-114)||(15589936-15590050)
chr6 (20-156)||(13871468-13871604)
chr6 (6-126)||(8693482-8693608)
chr6 (59-156)||(6296136-6296233)
chr6 (59-156)||(6302946-6303043)
chr6 (45-126)||(7076709-7076790)
chr6 (59-126)||(2304725-2304792)
chr6 (59-126)||(31705332-31705399)
chr6 (59-126)||(31937307-31937374)
chr6 (37-111)||(34503768-34503842)
chr6 (59-112)||(23101295-23101348)
chr6 (59-126)||(12481257-12481324)
chr6 (59-126)||(23654417-23654484)
chr6 (59-126)||(35219800-35219867)
chr6 (26-156)||(4921735-4921865)
chr6 (80-156)||(6419766-6419842)
chr6 (59-126)||(1106754-1106821)
chr6 (35-126)||(27135279-27135369)
chr6 (72-126)||(23638020-23638074)
chr6 (53-114)||(3358950-3359011)
chr6 (65-126)||(19402703-19402764)
chr6 (59-127)||(2488303-2488371)
chr6 (61-125)||(4393938-4394002)
chr6 (82-126)||(12342927-12342971)
chr6 (82-126)||(29284920-29284964)
chr6 (35-114)||(12654166-12654245)
chr6 (68-114)||(1915082-1915128)
chr6 (68-117)||(14730798-14730847)
chr6 (80-124)||(15985868-15985912)
[»] chr5 (37 HSPs)
chr5 (20-114)||(17687384-17687478)
chr5 (59-126)||(6635415-6635482)
chr5 (59-125)||(7771708-7771774)
chr5 (59-126)||(6281211-6281278)
chr5 (7-126)||(11734648-11734773)
chr5 (59-125)||(17732273-17732339)
chr5 (16-126)||(25962086-25962196)
chr5 (20-126)||(29097956-29098068)
chr5 (62-126)||(11858077-11858141)
chr5 (71-119)||(35402209-35402257)
chr5 (37-137)||(39915649-39915749)
chr5 (59-126)||(3079221-3079288)
chr5 (59-114)||(17096128-17096183)
chr5 (59-126)||(23882003-23882070)
chr5 (59-126)||(33164355-33164422)
chr5 (7-114)||(3740536-3740649)
chr5 (22-120)||(7150984-7151082)
chr5 (59-156)||(34431197-34431292)
chr5 (20-125)||(39531254-39531363)
chr5 (66-137)||(374438-374509)
chr5 (59-126)||(980916-980983)
chr5 (35-143)||(17699703-17699817)
chr5 (59-114)||(20483365-20483420)
chr5 (6-146)||(26294885-26295031)
chr5 (76-126)||(25487775-25487825)
chr5 (71-144)||(26240577-26240650)
chr5 (53-126)||(32309331-32309404)
chr5 (20-114)||(32347556-32347656)
chr5 (42-115)||(35275856-35275929)
chr5 (59-115)||(42609322-42609378)
chr5 (59-123)||(43494030-43494094)
chr5 (35-114)||(12215312-12215390)
chr5 (59-126)||(17331495-17331562)
chr5 (59-126)||(23428419-23428486)
chr5 (68-126)||(39531633-39531691)
chr5 (65-125)||(12891844-12891904)
chr5 (70-126)||(34906320-34906376)
[»] chr8 (40 HSPs)
chr8 (6-126)||(4757332-4757458)
chr8 (6-126)||(37612820-37612946)
chr8 (63-126)||(3204684-3204747)
chr8 (20-126)||(10334343-10334449)
chr8 (20-114)||(32778813-32778907)
chr8 (6-156)||(9501723-9501879)
chr8 (56-145)||(10338714-10338803)
chr8 (59-156)||(31202595-31202692)
chr8 (59-156)||(31407643-31407740)
chr8 (35-143)||(13576065-13576173)
chr8 (59-123)||(24700002-24700066)
chr8 (59-127)||(38546048-38546116)
chr8 (59-126)||(43937072-43937139)
chr8 (43-143)||(2968682-2968782)
chr8 (20-156)||(7579705-7579847)
chr8 (59-126)||(14600593-14600660)
chr8 (56-126)||(2234362-2234432)
chr8 (56-126)||(37128379-37128449)
chr8 (53-114)||(19489008-19489069)
chr8 (59-156)||(41361869-41361966)
chr8 (59-127)||(13570634-13570702)
chr8 (59-126)||(1810117-1810184)
chr8 (59-126)||(2025119-2025186)
chr8 (8-62)||(15288665-15288719)
chr8 (8-62)||(15469034-15469088)
chr8 (59-125)||(28297002-28297068)
chr8 (20-143)||(39067539-39067668)
chr8 (61-126)||(24210408-24210473)
chr8 (20-114)||(24791018-24791118)
chr8 (35-115)||(10952152-10952232)
chr8 (35-115)||(10960157-10960237)
chr8 (59-114)||(10148124-10148179)
chr8 (59-114)||(11162062-11162117)
chr8 (56-111)||(19720191-19720246)
chr8 (71-126)||(22787659-22787714)
chr8 (71-126)||(30026789-30026844)
chr8 (59-156)||(12329764-12329861)
chr8 (52-125)||(22956446-22956519)
chr8 (71-115)||(20992985-20993029)
chr8 (59-115)||(31308326-31308382)
[»] chr2 (56 HSPs)
chr2 (6-158)||(32314577-32314735)
chr2 (22-126)||(5754455-5754559)
chr2 (20-112)||(34471147-34471239)
chr2 (6-126)||(18089225-18089351)
chr2 (20-126)||(36868175-36868287)
chr2 (6-156)||(43473956-43474112)
chr2 (6-143)||(28261716-28261859)
chr2 (35-126)||(11798386-11798477)
chr2 (35-125)||(6431265-6431355)
chr2 (59-156)||(10286894-10286991)
chr2 (35-128)||(19904673-19904766)
chr2 (59-156)||(28230984-28231081)
chr2 (7-156)||(7072777-7072932)
chr2 (59-143)||(9689872-9689956)
chr2 (42-114)||(20124639-20124711)
chr2 (59-126)||(4732237-4732304)
chr2 (79-126)||(6510649-6510696)
chr2 (59-126)||(13740547-13740614)
chr2 (59-114)||(13878896-13878951)
chr2 (59-114)||(14019021-14019076)
chr2 (35-114)||(15920053-15920132)
chr2 (6-122)||(27095877-27095999)
chr2 (20-156)||(38384299-38384441)
chr2 (59-126)||(44942453-44942520)
chr2 (80-126)||(12994120-12994166)
chr2 (60-126)||(33012215-33012281)
chr2 (20-126)||(9978511-9978623)
chr2 (59-128)||(43696033-43696102)
chr2 (59-143)||(22597285-22597369)
chr2 (59-143)||(35333655-35333739)
chr2 (63-126)||(4426549-4426612)
chr2 (59-126)||(4739496-4739563)
chr2 (35-122)||(11426814-11426901)
chr2 (59-114)||(12891005-12891060)
chr2 (20-111)||(17767408-17767499)
chr2 (70-157)||(26254834-26254920)
chr2 (59-126)||(32015420-32015487)
chr2 (77-127)||(8781718-8781768)
chr2 (21-112)||(29542974-29543071)
chr2 (16-114)||(45694290-45694388)
chr2 (16-125)||(7581931-7582040)
chr2 (75-156)||(25067989-25068069)
chr2 (42-143)||(27666360-27666461)
chr2 (59-128)||(31908704-31908772)
chr2 (59-143)||(4604194-4604278)
chr2 (80-155)||(6593372-6593450)
chr2 (59-143)||(12704837-12704921)
chr2 (59-111)||(34416650-34416702)
chr2 (51-143)||(38233720-38233812)
chr2 (53-112)||(13548782-13548841)
chr2 (59-126)||(34962963-34963030)
chr2 (35-114)||(36080702-36080781)
chr2 (35-125)||(8531425-8531515)
chr2 (53-127)||(17792640-17792714)
chr2 (59-125)||(20561019-20561085)
chr2 (71-156)||(38535204-38535289)
[»] chr1 (42 HSPs)
chr1 (6-144)||(3232937-3233081)
chr1 (6-128)||(4882187-4882315)
chr1 (50-125)||(9298294-9298369)
chr1 (22-97)||(13152636-13152711)
chr1 (59-126)||(33486917-33486984)
chr1 (59-126)||(44517314-44517381)
chr1 (20-125)||(12871789-12871894)
chr1 (42-126)||(8737517-8737601)
chr1 (6-114)||(7995388-7995502)
chr1 (59-126)||(14265451-14265518)
chr1 (37-120)||(31427015-31427098)
chr1 (20-114)||(32878887-32878981)
chr1 (19-124)||(3101836-3101941)
chr1 (49-126)||(13999133-13999210)
chr1 (42-114)||(25032958-25033030)
chr1 (59-126)||(15391139-15391206)
chr1 (35-126)||(42491060-42491151)
chr1 (56-126)||(27534864-27534934)
chr1 (56-126)||(32784246-32784316)
chr1 (67-124)||(15791170-15791227)
chr1 (20-126)||(45750645-45750757)
chr1 (59-126)||(13488423-13488490)
chr1 (6-126)||(29205452-29205578)
chr1 (59-126)||(37822233-37822299)
chr1 (59-114)||(51418163-51418218)
chr1 (59-125)||(42276523-42276589)
chr1 (20-125)||(40862667-40862772)
chr1 (80-156)||(10782638-10782714)
chr1 (35-143)||(47551245-47551353)
chr1 (59-146)||(424178-424265)
chr1 (59-126)||(17347764-17347831)
chr1 (59-126)||(18343780-18343846)
chr1 (87-158)||(24114594-24114665)
chr1 (59-114)||(28678017-28678072)
chr1 (59-125)||(4870920-4870986)
chr1 (7-137)||(8925345-8925474)
chr1 (80-126)||(20411739-20411785)
chr1 (53-143)||(28399210-28399300)
chr1 (20-114)||(29938417-29938510)
chr1 (59-156)||(10627137-10627233)
chr1 (47-112)||(46930276-46930341)
chr1 (42-114)||(29069711-29069783)
[»] scaffold0999 (1 HSPs)
scaffold0999 (22-97)||(1900-1975)
[»] scaffold0121 (1 HSPs)
scaffold0121 (59-156)||(13132-13229)
[»] scaffold0542 (1 HSPs)
scaffold0542 (42-114)||(3961-4033)
[»] scaffold1379 (2 HSPs)
scaffold1379 (20-123)||(931-1034)
scaffold1379 (71-125)||(143-197)
[»] scaffold0536 (1 HSPs)
scaffold0536 (59-114)||(3079-3134)
[»] scaffold1350 (1 HSPs)
scaffold1350 (59-156)||(1711-1808)
[»] scaffold0321 (1 HSPs)
scaffold0321 (20-126)||(6972-7078)
[»] scaffold0056 (1 HSPs)
scaffold0056 (59-113)||(74344-74398)
[»] scaffold0312 (1 HSPs)
scaffold0312 (59-146)||(6284-6371)
[»] scaffold0007 (1 HSPs)
scaffold0007 (48-115)||(201927-201994)
[»] scaffold0432 (1 HSPs)
scaffold0432 (20-74)||(2284-2338)
[»] scaffold0155 (1 HSPs)
scaffold0155 (64-126)||(35251-35313)


Alignment Details
Target: chr3 (Bit Score: 140; Significance: 2e-73; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 31730930 - 31730779
Alignment:
Q  7 aatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatca 106  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  31730930 aatatgactatattcatgtctctagatctgcaacattgatgacgccaaagttattgatcggatttgcacttgttcaaagttaatctttcaacttgaatca 31730831  T
Q  107 aataaacattgcactaagacagtatataaaagacacatcgtacgaagacgag 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31730830 aataaacattgcactaagacagtatataaaagacacatcgtacgaagacgag 31730779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 3457232 - 3457076
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||| ||||||| ||| |||||  |||| |||||||||      || |||||||||||||||| ||| |||||| |||||||||||||    
T  3457232 taatatgactatattcttgtctctggatctgcaatgttgacgacgccaaaatcattgtcattgatcggatttgcacttgctcaaagctaatctttcaact 3457133  T
Q  100 tgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||||||||||||||  | |||||||| | | |||||| ||||| || || ||||||    
T  3457132 tgaatcaaataaacaccgtactaagacgggaaataaaaaacacaccgcacaaagacg 3457076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 54706551 - 54706677
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaag------ttattgatcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| |||||| |||| ||||||||||      | ||||||||||| |||| ||| |||||| ||||||||||||     
T  54706551 taatatgactatattcatgtctccggatctgcaacgttgacgacgccaaagccattgtcattgatcggatctgcacttgctcaaaggtaatctttcaacc 54706650  T
Q  100 tgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||  ||||||||||    
T  54706651 tgaatcaaataaacaccgcactaagac 54706677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 35 - 156
Target Start/End: Original strand, 105906 - 106027
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatata 134  Q
    |||||| |||| ||| | ||||| |||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||   ||||||||| | | |||    
T  105906 tgcaacgttgacgacacaaaagtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacacgacactaagacgggaaata 106005  T
Q  135 aaagacacatcgtacgaagacg 156  Q
    ||| |||||||| || ||||||    
T  106006 aaaaacacatcgcacaaagacg 106027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 53155325 - 53155392
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||| ||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  53155325 attgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 53155392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 53402900 - 53402758
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||| ||| |||||| |||| ||||||||||| ||||      |||||||||||| ||| |||||| |||||||||||| ||||||||||||||    
T  53402900 tcatgtctctggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaac 53402801  T
Q  114 attgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |  |||||||||| | | || ||| |||||||| || ||||||    
T  53402800 agcgcactaagacgggaaatcaaaaacacatcgcacaaagacg 53402758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 1074789 - 1074856
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||| ||| |||||| ||||||||||||||||||||||||| || | |||||||||    
T  1074789 attgatcggatttgcacttgctcaaagctaatctttcaacttgaatcaaataatcactacactaagac 1074856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 31270619 - 31270493
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| |||||| |||| |||||||||      || ||||||||||| | || ||| |||||| ||||||||||||     
T  31270619 taatatgactatattcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctaatctttcaacc 31270520  T
Q  100 tgaatcaaataaacattgcactaagac 126  Q
    |||||| ||||||||  ||||||||||    
T  31270519 tgaatcgaataaacaccgcactaagac 31270493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 48652335 - 48652432
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||  ||||||||||||||||||||||| | |||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  48652335 attgatcggatctgctcttgttcaaagttaatctttcaacctaaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagacg 48652432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 126
Target Start/End: Original strand, 3961640 - 3961724
Alignment:
Q  42 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||| ||||||||| |||||| | || | |||||| |||||||||||||| |||| |||||||||||||||  ||||||||||    
T  3961640 ttgatggcgccaaagtcattgattgaatctacatttgctcaaagttaatcttacaacctgaatcaaataaacaccgcactaagac 3961724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 156
Target Start/End: Complemental strand, 11819320 - 11819220
Alignment:
Q  56 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagac 155  Q
    |||||||||||||| |||   ||||||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || |||||    
T  11819320 gttattgatcggatatgctcctgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagac 11819221  T
Q  156 g 156  Q
    |    
T  11819220 g 11819220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 19861174 - 19861258
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    |||||||| || |||| ||| ||||||||||| ||||||| |||||||| |||||||||||||||||| | | |||||| |||||    
T  19861174 attgatcgaatatgcacttgctcaaagttaatatttcaacctgaatcaagtaaacattgcactaagactggaaataaaaaacaca 19861258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 31462641 - 31462725
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||||   |||||||||| ||| |||||| |||||    
T  31462641 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacgccgcactaagaccgtaaataaaaaacaca 31462725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 13701896 - 13701951
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||| |||||||| ||| |||||| ||||||||||||||||||||||||||||    
T  13701896 attgatcagatttgcacttgctcaaagctaatctttcaacttgaatcaaataaaca 13701951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 33637637 - 33637570
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| ||| ||||||||||| |||||||||||| | |||||||||||||  ||||||||||    
T  33637637 attgatcggatctgcttttgttcaaagctaatctttcaacctaaatcaaataaacaccgcactaagac 33637570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 47733748 - 47733839
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||| |||| ||||||||||| |||||| | || |||||||| |||||  |||| ||||||| |||||||||||||||  ||||||||||    
T  47733748 tgcaactttgacgacgccaaagtcattgattgaatatgcatttgctcaaaactaatatttcaacctgaatcaaataaacaccgcactaagac 47733839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 55455099 - 55455032
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  55455099 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 55455032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 158
Target Start/End: Original strand, 40401417 - 40401495
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacgag 158  Q
    ||||||||||| ||||||| ||||||||||||||||||  ||||||| | | |||||| ||||| ||||| ||||||||    
T  40401417 tcaaagttaatatttcaacctgaatcaaataaacattgttctaagacggaaaataaaaaacacaccgtacaaagacgag 40401495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 48401154 - 48401041
Alignment:
Q  7 aatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaactt 100  Q
    |||||||||||||| |||||||  ||| |||||| |||| ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||| ||| |    
T  48401154 aatatgactatatttatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatcttttaacct 48401055  T
Q  101 gaatcaaataaaca 114  Q
    ||||||||||||||    
T  48401054 gaatcaaataaaca 48401041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 14585696 - 14585629
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| | |||||||||| |||||||||||||||  ||||||||||    
T  14585696 attgatcggatctgcacttgctcaaagctgatctttcaacctgaatcaaataaacaccgcactaagac 14585629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 22485199 - 22485132
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||| ||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  22485199 attgaccggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 22485132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 36624590 - 36624657
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| | |||| |||||||||||| |||||||||||||||  ||||||||||    
T  36624590 attgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 36624657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 48855111 - 48855056
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  48855111 attgatcggatctgcacttgctcaaagctaatctttcaacatgaatcaaataaaca 48855056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 49627990 - 49628057
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| | |||| |||||||||||| |||||||||||||||  ||||||||||    
T  49627990 attgatcggatctgcacttgctaaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 49628057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 53962395 - 53962285
Alignment:
Q  16 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    ||||||||||| | |||| | |||| ||||||| | |||| | | |||| |||| |||| ||| |||||| |||||||| ||| |||||||||||||||     
T  53962395 atattcatgtcccctgatctccaacgttgatgaagtcaaaatcaatgattggatctgcacttgctcaaagctaatcttttaacctgaatcaaataaacac 53962296  T
Q  116 tgcactaagac 126  Q
     ||||||||||    
T  53962295 cgcactaagac 53962285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 122
Target Start/End: Original strand, 32080604 - 32080712
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||  ||| |||||| |||||||||||||||| ||||      ||||||| |||  |||||||||| ||||| |||||  ||||||||||||||    
T  32080604 tcatgtctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgctcttgttcaaagctaatcattcaagctgaatcaaataaac 32080703  T
Q  114 attgcacta 122  Q
    || ||||||    
T  32080704 atcgcacta 32080712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 30156173 - 30156273
Alignment:
Q  56 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagac 155  Q
    |||||||||||||| || | ||| |||||| |||| |||||||  ||||||||||||||  |||||||||| | | |||||| ||||| || || |||||    
T  30156173 gttattgatcggatctgaacttgctcaaagctaatttttcaaccagaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagac 30156272  T
Q  156 g 156  Q
    |    
T  30156273 g 30156273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 19645425 - 19645374
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaata 110  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||    
T  19645425 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaata 19645374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 6 - 154
Target Start/End: Original strand, 24483515 - 24483669
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| |||||| |||| || ||||||      || ||||||||||| |||| ||| |||||| |||| |||||||     
T  24483515 taatatgactatattcatgtctccagatctgcaacgttgacgatgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatatttcaacc 24483614  T
Q  100 tgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaaga 154  Q
    | |||||| ||||  | |||||||||  | | |||||| ||||| ||||| ||||    
T  24483615 taaatcaagtaaatgtcgcactaagatggaaaataaaaaacacaccgtacaaaga 24483669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 35174930 - 35174875
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  35174930 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 35174875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 40883761 - 40883828
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||  |||||||||||| ||||||||| |||||  ||||||||||    
T  40883761 attgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaagaaacaccgcactaagac 40883828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 115
Target Start/End: Original strand, 41598381 - 41598416
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    ||||||||||||||||||||| ||||||||||||||    
T  41598381 tcaaagttaatctttcaacttaaatcaaataaacat 41598416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 48212598 - 48212507
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||| |||||  |||||||||| |||||| |||| |||| ||| ||| || ||||| |||||  |||||| |||||||| |||||||||||    
T  48212598 tgcaatattgacaacgccaaagtcattgattggatctgcacttgctcagagctaatccttcaatctgaatctaataaacactgcactaagac 48212507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 40013179 - 40013233
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||    
T  40013179 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 40013233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 122
Target Start/End: Complemental strand, 48822287 - 48822245
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcacta 122  Q
    ||||||||||||||||||| | ||||||||||||| |||||||    
T  48822287 tcaaagttaatctttcaaccttaatcaaataaacactgcacta 48822245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 2148012 - 2147924
Alignment:
Q  37 caacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||| |||||||| | ||||| ||||||| ||| | || ||| |||||| ||||||| ||||| ||||||||||||||  ||||||||||    
T  2148012 caacgttgatgacactaaagtcattgatcagatctacacttgctcaaagataatctt-caactcgaatcaaataaacaccgcactaagac 2147924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 123
Target Start/End: Complemental strand, 47272698 - 47272657
Alignment:
Q  82 aaagttaatctttcaacttgaatcaaataaacattgcactaa 123  Q
    |||||||||| |||||| | ||||||||||||||||||||||    
T  47272698 aaagttaatcattcaaccttaatcaaataaacattgcactaa 47272657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 69 - 125
Target Start/End: Original strand, 25135216 - 25135272
Alignment:
Q  69 tttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    |||||| ||| |||||  |||| ||||||||||||||| ||||||| ||||||||||    
T  25135216 tttgcacttgctcaaatctaatatttcaacttgaatcagataaacactgcactaaga 25135272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 36691694 - 36691778
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    |||||||| || |||| |||  |||||||||||||||||| || ||||||||||||  | |||||||| | | |||||| |||||    
T  36691694 attgatcgaatatgcacttgcgcaaagttaatctttcaacctggatcaaataaacaccgtactaagacggaaaataaaaaacaca 36691778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 5e-52; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 6496178 - 6496027
Alignment:
Q  7 aatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatca 106  Q
    |||||||||||||||||||||||  || ||||||||||| || | |||||||||||||||||| |||| ||||||||||||||||||||||| |||||||    
T  6496178 aatatgactatattcatgtctctaaatctgcaacattgacgatgtcaaagttattgatcggatctgcacttgttcaaagttaatctttcaacctgaatca 6496079  T
Q  107 aataaacattgcactaagacagtatataaaagacacatcgtacgaagacgag 158  Q
    ||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  6496078 aataaacattgcactaagacaatatataaaaaatacatcgtacgaagacgag 6496027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 14657699 - 14657793
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||  ||| ||||||||||||||||||||||| |||||||| || |||||||| ||||||||||||||||||  |||||||||||||||    
T  14657699 tcatgtctccggatctgcaacattgatgacgccaaagtcattgatcgaatatgcatttgctcaaagttaatctttcaatctgaatcaaataaaca 14657793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 38277102 - 38276994
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatata 134  Q
    |||||| |||| ||||||||||| |||||||||||||| | ||| |||||| |||| ||||||| ||||||||||||||||||||||||||| | | |||    
T  38277102 tgcaacgttgacgacgccaaagtcattgatcggatttgaacttgctcaaagctaatatttcaacatgaatcaaataaacattgcactaagacgggaaata 38277003  T
Q  135 aaagacaca 143  Q
    ||| |||||    
T  38277002 aaaaacaca 38276994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 21954681 - 21954760
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||| |||| ||||||||||| |||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||    
T  21954681 tgcaacgttgacgacgccaaagtcattgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 21954760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 25112770 - 25112679
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| ||   |||||||||||||||||| |||| ||| ||||||||||||||||||||| |||||||||||||| | ||||||||    
T  25112770 tgcaacattgacgatatcaaagttattgatcggatatgcacttgctcaaagttaatctttcaacttaaatcaaataaacatcgtactaagac 25112679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 45482298 - 45482201
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||| |||||||||| | | |||||| |||||||| || ||||||    
T  45482298 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagacgggaaataaaaaacacatcgcacaaagacg 45482201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 4621215 - 4621318
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 119  Q
    |||||||||  ||| |||||  |||||||| ||||||| ||||||||||| |||| |||||||||  |||||||||||| |||||||||||||||  |||    
T  4621215 tcatgtctccggatctgcaatgttgatgacaccaaagtcattgatcggatctgcacttgttcaaaactaatctttcaacctgaatcaaataaacaccgca 4621314  T
Q  120 ctaa 123  Q
    ||||    
T  4621315 ctaa 4621318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 10094675 - 10094608
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  10094675 attgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 10094608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 37714737 - 37714646
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||| |||| ||||  || ||||||||| | || |||| ||| ||||| ||||||||||||| |||||||||||||||||||||||||||    
T  37714737 tgcaacgttgacgacgtaaatgttattgattgaatctgcacttgatcaaaattaatctttcaacctgaatcaaataaacattgcactaagac 37714646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 124
Target Start/End: Original strand, 39532862 - 39532927
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaag 124  Q
    ||||||||||| |||| ||| |||||| ||||||||||||||||||||||||||||  ||||||||    
T  39532862 attgatcggatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactaag 39532927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 42644965 - 42644809
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| |||||| |||| |||||||||      || ||||||||||| || | ||| |||||| |||| |||||||     
T  42644965 taatatgactatattcatgtctccggatctgcaacgttgacgacgccaaaatcattgtcattgatcggatctgtacttgctcaaagctaatatttcaacc 42644866  T
Q  100 tgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||| |||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  42644865 tgaattaaataaacaccgcactaagacggaaaataaaaaacacaccgcacaaagacg 42644809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 9719860 - 9719927
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  9719860 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 9719927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 11833252 - 11833185
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  11833252 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 11833185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 21603694 - 21603627
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||  ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  21603694 attgatcggatctgcactttctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 21603627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 28664828 - 28664895
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||| ||| |||| ||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  28664828 attgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 28664895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 29352484 - 29352393
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||| |||| ||||| ||||| |||||||| || | || |||  ||||| |||||||||||| |||||||||||||||| ||||||||||    
T  29352484 tgcaacgttgacgacgcaaaagtcattgatcgaatctacacttgcacaaagctaatctttcaacctgaatcaaataaacatcgcactaagac 29352393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 9785551 - 9785485
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||    
T  9785551 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 9785485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 39707557 - 39707452
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 119  Q
    |||||||||  ||| |||||| || |||| | |||||| |||||| |||| |||| ||| |||||||||||  |||||||||||| ||||||||| ||||    
T  39707557 tcatgtctccggatatgcaacgttaatgatgtcaaagtcattgattggatctgcacttgctcaaagttaatacttcaacttgaat-aaataaacactgca 39707459  T
Q  120 ctaagac 126  Q
    |||||||    
T  39707458 ctaagac 39707452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 62 - 156
Target Start/End: Original strand, 48304283 - 48304377
Alignment:
Q  62 gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||   | |||||| ||||| ||||| ||||||    
T  48304283 gatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgagaaataaaaaacacaccgtacaaagacg 48304377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 118
Target Start/End: Complemental strand, 10624038 - 10623973
Alignment:
Q  53 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgc 118  Q
    ||||| |||||| | ||||| | ||| |||||| ||||||||||||||||||||||||||||||||    
T  10624038 aaagtcattgattgaatttgtacttgatcaaagctaatctttcaacttgaatcaaataaacattgc 10623973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 143
Target Start/End: Original strand, 24320113 - 24320194
Alignment:
Q  62 gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    |||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| |||||    
T  24320113 gatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggaaaataaaaaacaca 24320194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 42603656 - 42603753
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| | |||| |||||||||||| |||||||||||||||  |||||| ||||| | |||||| ||||| || || ||||||    
T  42603656 attgatcggatatgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaggacaggaaataaaaaacacagcgcacaaagacg 42603753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 46025916 - 46026013
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| |||||| |||||||||||| | |||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  46025916 attgatcggatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagacg 46026013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 1281024 - 1281091
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||| |||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  1281024 attgttcggatctgcacttgctcaaaggtaatctttcaacctgaatcaaataaacaccgcactaagac 1281091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 2622826 - 2622771
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||| |||| |||| ||| |||||||||||||||||| ||||||||||||||||    
T  2622826 attgattggatctgcacttgctcaaagttaatctttcaatttgaatcaaataaaca 2622771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 3266620 - 3266565
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  3266620 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 3266565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 24988367 - 24988434
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| | || ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  24988367 attgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 24988434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 71 - 158
Target Start/End: Original strand, 37375930 - 37376017
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacgag 158  Q
    |||||||| |||| |||||||||||||| ||||||||||||||   |||||||||| | | |||||| ||||| || || ||||||||    
T  37375930 tgcatttgctcaatgttaatctttcaacctgaatcaaataaactacgcactaagacggaaaataaaaaacacaccgcacaaagacgag 37376017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 41288190 - 41288135
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  41288190 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 41288135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 45457443 - 45457498
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  45457443 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 45457498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 114
Target Start/End: Complemental strand, 4028394 - 4028360
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||||||||||||||||||||||||||||    
T  4028394 tcaaagttaatctttcaacttgaatcaaataaaca 4028360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 26161185 - 26161116
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 128  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||| |||   ||||||||||||    
T  26161185 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaatgaaccccgcactaagacag 26161116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 40761822 - 40761758
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaa 123  Q
    ||||||||||| |||| |||||||||| |||| ||||||| | |||||||||||||  |||||||    
T  40761822 attgatcggatctgcacttgttcaaagctaatatttcaaccttaatcaaataaacaccgcactaa 40761758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 114
Target Start/End: Original strand, 43256416 - 43256492
Alignment:
Q  38 aacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||| ||||  |||||||||||| | || |||| ||  | ||||||||| |||||||||||||||||||||||    
T  43256416 aacattgacgacgtaaaagttattgatggaatatgcacttaattaaagttaatatttcaacttgaatcaaataaaca 43256492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 112
Target Start/End: Complemental strand, 5238193 - 5238134
Alignment:
Q  53 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 112  Q
    ||||| |||||| | || |||||||| | ||||||||||||||||| |||||||||||||    
T  5238193 aaagtcattgattgaatctgcatttggttaaagttaatctttcaacctgaatcaaataaa 5238134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 5684598 - 5684543
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||| |||||    
T  5684598 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaaca 5684543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 5709648 - 5709593
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||| |||||    
T  5709648 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaaca 5709593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 158
Target Start/End: Complemental strand, 9137614 - 9137543
Alignment:
Q  87 taatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacgag 158  Q
    |||||||||||  ||||||||||||||||||| ||||||| | | |||||| ||||| || || ||||||||    
T  9137614 taatctttcaaactgaatcaaataaacattgcgctaagacgggaaataaaaaacacaacgcacaaagacgag 9137543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 10574615 - 10574560
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||    
T  10574615 attgatcggatctgcacttgctcaaaactaatctttcaacatgaatcaaataaaca 10574560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 17509091 - 17509158
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||  |||||||||||| ||||| |||||||||  ||||||||||    
T  17509091 attgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgcactaagac 17509158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 17544123 - 17544056
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||  |||||||||||| ||||| |||||||||  ||||||||||    
T  17544123 attgatcggatctgcacttgctcaaaactaatctttcaacctgaattaaataaacaccgcactaagac 17544056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 21990896 - 21990829
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||  ||| ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  21990896 attgatcggatcagcacttgctcaaagctaatctttcaagctgaatcaaataaacaccgcactaagac 21990829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 80 - 123
Target Start/End: Complemental strand, 22493247 - 22493204
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcactaa 123  Q
    ||||||||||||||||||| ||||||||||||| || |||||||    
T  22493247 tcaaagttaatctttcaacctgaatcaaataaagatcgcactaa 22493204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 27050362 - 27050417
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||| |||||| ||||||||| || |||||||||||||||  ||||||||||    
T  27050362 tgcatttgctcaaagctaatctttcgacatgaatcaaataaacaccgcactaagac 27050417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 126
Target Start/End: Original strand, 27704985 - 27705024
Alignment:
Q  87 taatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||||||||||||||| |||| ||||||    
T  27704985 taatctttcaacttgaatcaaataaacactgcattaagac 27705024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 32740986 - 32740935
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaata 110  Q
    |||||||||||||||| ||| |||||  |||||||||||| |||||||||||    
T  32740986 attgatcggatttgcacttgctcaaaactaatctttcaacctgaatcaaata 32740935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 36253164 - 36253109
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||||    
T  36253164 attgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaaca 36253109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 125
Target Start/End: Complemental strand, 25531730 - 25531620
Alignment:
Q  16 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattga-tcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||||||  |||  ||||| |||||||| || |||| ||||| |  |||||||| ||| |||||| ||||| |||||| | |||||||||||||    
T  25531730 atattcatgtctcaggatcagcaacgttgatgacaccgaagtcattgaatttgatttgcacttgctcaaagctaatcattcaaccttaatcaaataaaca 25531631  T
Q  115 ttgcactaaga 125  Q
      |||||||||    
T  25531630 ccgcactaaga 25531620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 6667629 - 6667532
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||| ||| |||| ||| ||||||  ||||||||||||||| |||| ||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  6667629 attgatcagatatgcacttgatcaaagccaatctttcaacttgagtcaattaaacaccgcactaagacggaaaataaaaaacacaccgcacaaagacg 6667532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 29 - 126
Target Start/End: Complemental strand, 46881443 - 46881346
Alignment:
Q  29 ttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||| |||||| |||| || || ||| | |||||| | ||||| | ||| |||||  |||| ||||||| | |||||||||||||||||||||||||    
T  46881443 ttgatctgcaacgttgacgatgcaaaaatcattgattgaatttgaacttgatcaaaactaatatttcaacctaaatcaaataaacattgcactaagac 46881346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 22 - 114
Target Start/End: Complemental strand, 9137227 - 9137135
Alignment:
Q  22 atgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||  ||| |||||| |||| ||||||||||| | |||||| || |||| ||  |||||| |||||||| ||| | |||||||||||||    
T  9137227 atgtctccggatctgcaacgttgacgacgccaaagtcaatgatcgaatatgcactttctcaaagctaatcttttaaccttaatcaaataaaca 9137135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 48 - 128
Target Start/End: Complemental strand, 17223378 - 17223298
Alignment:
Q  48 acgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 128  Q
    |||||||||| ||||||| ||| |||  ||  |||||| || |||||| || |||||||||||| ||| ||||||||||||    
T  17223378 acgccaaagtcattgatcagatctgcgcttaatcaaagctagtctttctacctgaatcaaataatcatcgcactaagacag 17223298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 36719439 - 36719491
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 111  Q
    ||||||| ||| || | ||| ||||||||||||||||||| ||||||||||||    
T  36719439 attgatcagatctgtacttgctcaaagttaatctttcaacctgaatcaaataa 36719491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 7e-36; HSPs: 58)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 8712817 - 8712697
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatc 105  Q
    |||||||||||||||||||||||| ||| |||||| |||| ||||||||||| ||||||||||| |||| ||| |||||| |||||||||||| ||||||    
T  8712817 taatatgactatattcatgtctctggatctgcaacgttgacgacgccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatc 8712718  T
Q  106 aaataaacattgcactaagac 126  Q
    |||||||||| ||||||||||    
T  8712717 aaataaacatcgcactaagac 8712697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 5814619 - 5814513
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 119  Q
    |||||||||| ||| |||||| |||||||||||||||| |||||||| || |||| ||| |||||| |||||||||||| ||||||||||||||| ||||    
T  5814619 tcatgtctctggatctgcaacgttgatgacgccaaagtcattgatcgaatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgca 5814520  T
Q  120 ctaagac 126  Q
    |||||||    
T  5814519 ctaagac 5814513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 13965853 - 13965697
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| | |||| |||| ||||||||||||||||      ||||||| |||| ||| |||||| ||||||||||||     
T  13965853 taatatgactatattcatgtctccggatctacaacgttgacgacgccaaagttattgtcattgatcggatctgcacttgctcaaagctaatctttcaacc 13965754  T
Q  100 tgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    | |||||||||||||  |||||||||| | | |||||| |||||||| || ||||||    
T  13965753 taaatcaaataaacaccgcactaagacgggaaataaaaaacacatcgcacaaagacg 13965697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 112
Target Start/End: Original strand, 56236670 - 56236762
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 112  Q
    |||||||||  ||| |||||| |||| ||||||||||| ||||||||||| |||  ||| |||||||||||||||||||||||||||||||||    
T  56236670 tcatgtctccggatctgcaacgttgacgacgccaaagtcattgatcggatctgcgcttgctcaaagttaatctttcaacttgaatcaaataaa 56236762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 7 - 126
Target Start/End: Complemental strand, 3159280 - 3159161
Alignment:
Q  7 aatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatca 106  Q
    ||||||||||| |||| |||||  ||| |||||| |||||||||| ||| | ||||||||||| |||| ||| |||||| ||| |||||||| ||| |||    
T  3159280 aatatgactatgttcaagtctccggatctgcaacgttgatgacgctaaaatcattgatcggatatgcacttgctcaaagctaacctttcaacctgattca 3159181  T
Q  107 aataaacattgcactaagac 126  Q
    ||||||||| ||||||||||    
T  3159180 aataaacatcgcactaagac 3159161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 6911914 - 6911817
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||  |||||||||| |||||||||||| ||||||||||||||| ||||||||||||| | |||||| ||||| || || ||||||    
T  6911914 attgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacactgcactaagacaggaaataaaaaacacaccgcacaaagacg 6911817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 7861093 - 7861190
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| | ||||||||||||||||| |||||||||||||||  |||||||||| | | || ||| |||||||| |||||||||    
T  7861093 attgatcggatctgcacttgcttaaagttaatctttcaacctgaatcaaataaacaccgcactaagacgggaaatcaaaaacacatcgcacgaagacg 7861190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 22757328 - 22757259
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 128  Q
    ||||||||||| |||||||| |||||| |||||||||||| |||||||||||||||  ||||||||||||    
T  22757328 attgatcggatctgcatttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacag 22757259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 145
Target Start/End: Original strand, 394161 - 394247
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatc 145  Q
    ||||||||||| | || ||| ||||||||||||||||||| |||||||||||||||  |||||||||| | | |||||| |||||||    
T  394161 attgatcggatctacacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacacatc 394247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 143
Target Start/End: Complemental strand, 7060602 - 7060473
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||| ||| |||||| |||||||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||||||||||||    
T  7060602 tcatgtctctggatctgcaacgttgatgacgccaaagtaattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 7060503  T
Q  114 attgcactaagacagtatataaaagacaca 143  Q
    |  ||| |||||| | | |||||| |||||    
T  7060502 accgcattaagacgggaaataaaaaacaca 7060473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 31522225 - 31522113
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||  ||| |||||| |||||||||||||||| ||||      ||||||| |||| ||| |||||  |||||||||||| ||||||||||||||    
T  31522225 tcatgtctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaac 31522126  T
Q  114 attgcactaagac 126  Q
    | |||||||||||    
T  31522125 actgcactaagac 31522113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 53647866 - 53647769
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| ||||||||||| ||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  53647866 attgatcggatctgcacttgctcaaagttaatttttcaacctgaatcaaataaacaccgcactaagacggaaaataaaaaacacaccgcacaaagacg 53647769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 20887644 - 20887727
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    |||||||||||||||||||| |||||| |||||||||||  |||||| ||||||||| |||||||||| | | |||||| |||||    
T  20887644 attgatcggatttgcatttgctcaaagctaatctttcaatctgaatc-aataaacatcgcactaagacgggaaataaaaaacaca 20887727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 60 - 156
Target Start/End: Complemental strand, 25658400 - 25658304
Alignment:
Q  60 ttgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||||||||| |||| ||| |||||| |||||||||||| | |||||||||||||| |||||||||| | | |||||| ||||| || || ||||||    
T  25658400 ttgatcggatctgcacttgctcaaagctaatctttcaacataaatcaaataaacatcgcactaagacggcaaataaaaaacacaccgcacaaagacg 25658304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 13586127 - 13586194
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  13586127 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 13586194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 20399790 - 20399857
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||| ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  20399790 attgatcggatttgcacttgctcaaagctaatctttcaaactgaatcaaataaacaccgcactaagac 20399857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 24789411 - 24789356
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  24789411 tgcatttgatcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 24789356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 24818848 - 24818903
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  24818848 tgcatttgatcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 24818903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 32616746 - 32616813
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||| ||| |||| ||| |||||| ||||||||||||||||||||||||||||  ||||||||||    
T  32616746 attgatcagatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactaagac 32616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 36124235 - 36124302
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||| ||||||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  36124235 attgatcgaatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 36124302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 40198408 - 40198487
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||| |||| |||  |||||| ||||||||||  | ||||||||||||| |||||||||||| |||||||||||||||    
T  40198408 tgcaacgttgacgacctcaaagtgattgatcggacatacatttgttcaaagataatctttcaacctgaatcaaataaaca 40198487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 43244268 - 43244335
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||||||||| |||||||||  ||||||||||    
T  43244268 attgatcggatatgcacttgctcaaagctaatctttcaacttgaatgaaataaacaccgcactaagac 43244335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 30202272 - 30202175
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||||||||||||||| ||  |||||| |||| |||||||||||||||||||| || |||||||| || | | || ||| ||||| ||||| ||||||    
T  30202272 attgatcggatttgcacttcctcaaagctaatttttcaacttgaatcaaataaccactgcactaaaacgggaaatcaaaaacacaccgtacaaagacg 30202175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 126
Target Start/End: Complemental strand, 50801508 - 50801384
Alignment:
Q  8 atatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttg 101  Q
    |||||||||||||||||||||  ||| |||||| |||| || | |||||| ||||      ||| ||| |||| ||| ||||| ||||||||||||| ||    
T  50801508 atatgactatattcatgtctccggatctgcaacgttgacgatgtcaaagtcattgtcattgatcagatctgcacttgctcaaaattaatctttcaacctg 50801409  T
Q  102 aatcaaataaacattgcactaagac 126  Q
    |||||||||||||  ||||||||||    
T  50801408 aatcaaataaacacagcactaagac 50801384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 71 - 143
Target Start/End: Complemental strand, 2448022 - 2447950
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    |||| ||| ||||||||||||||||||| | |||||||||||||  |||||||||| | |||||||| |||||    
T  2448022 tgcacttgctcaaagttaatctttcaacataaatcaaataaacaccgcactaagacgggatataaaaaacaca 2447950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 42197784 - 42197720
Alignment:
Q  62 gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  42197784 gatcggatctgcacttgctcaaagataatctttcaacctgaatcaaataaacaccgcactaagac 42197720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 24825883 - 24825816
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||| |  ||||||||||    
T  24825883 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaagaccgcactaagac 24825816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 27395064 - 27394997
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| | |||| |||||||||||| |||||||||||||||  ||||||||||    
T  27395064 attgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 27394997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 11210221 - 11210267
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  11210221 tcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 11210267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 60 - 126
Target Start/End: Original strand, 38944036 - 38944102
Alignment:
Q  60 ttgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||| |||| ||| |||||| || ||||||||| |||||||||||||||  ||||||||||    
T  38944036 ttgatcggatctgcacttgctcaaagctattctttcaacctgaatcaaataaacaccgcactaagac 38944102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 56062202 - 56062156
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||| |||| | |||||||||||||||||||||||||||||||||    
T  56062202 tcaaagataatatgtcaacttgaatcaaataaacattgcactaagac 56062156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 477899 - 477996
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||||| |||| |||| ||| |||||| |||| ||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  477899 attgattggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagacg 477996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 24568600 - 24568697
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||  |||||| |||||||||||| |||||||||||||||   ||||||||| | | |||||| ||||| || || ||||||    
T  24568600 attgatcggatctgcactttctcaaagctaatctttcaacctgaatcaaataaacaccccactaagacggaaaataaaaaacacaccgcacaaagacg 24568697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 39837829 - 39837732
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| ||||||  ||| ||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  39837829 attgatcggatctgcacttgctcaaagcaaatatttcaacctgaatcaaataaacaccgcactaagacgggaaataaaacacacaccgcacaaagacg 39837732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 143
Target Start/End: Complemental strand, 6882190 - 6882106
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    ||||||||||| |||| ||| ||| || |||||||||||| |||||||||||||||  ||| |||||| | | |||||| |||||    
T  6882190 attgatcggatctgcacttgctcatagctaatctttcaacctgaatcaaataaacaccgcattaagacggaaaataaaaaacaca 6882106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 24611687 - 24611739
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 111  Q
    ||||||| ||| |||| ||| ||||||||||||||||||| ||||||||||||    
T  24611687 attgatcagatctgcacttgctcaaagttaatctttcaacctgaatcaaataa 24611739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 26674606 - 26674554
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 111  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||    
T  26674606 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataa 26674554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 27090957 - 27090889
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 127  Q
    ||||||||||| | || ||| ||||||||||||||||||| ||||| | |||||||  |||||||||||    
T  27090957 attgatcggatctacacttgctcaaagttaatctttcaacctgaataagataaacaccgcactaagaca 27090889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 43278165 - 43278101
Alignment:
Q  62 gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||| | || ||| |||||||||||||| |||| |||||||||||||||  ||||||||||    
T  43278165 gatcggatatacacttgctcaaagttaatcttccaacctgaatcaaataaacaccgcactaagac 43278101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 626437 - 626492
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||| |||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  626437 attggtcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 626492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 7083699 - 7083750
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaata 110  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||    
T  7083699 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaata 7083750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 47 - 126
Target Start/End: Original strand, 12716992 - 12717071
Alignment:
Q  47 gacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| ||| ||| ||| |||| ||  |||||| ||||| |||||| |||||||||||||||  ||||||||||    
T  12716992 gacgccaaagtcattaatcagatctgcacttaatcaaagctaatccttcaacctgaatcaaataaacaccgcactaagac 12717071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 114
Target Start/End: Complemental strand, 12754385 - 12754342
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||| ||| ||||||||||| |||||||||||||||||||||||    
T  12754385 tgcacttggtcaaagttaatgtttcaacttgaatcaaataaaca 12754342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 156
Target Start/End: Complemental strand, 19745668 - 19745526
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||  ||| ||||||||||| ||||| ||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||||||| ||||    
T  19745668 tcatgtctcccgatctgcaacattgacgacgctaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaac 19745569  T
Q  114 attgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |   ||||||||| | | |||||| ||||| || || ||||||    
T  19745568 acctcactaagacgggaaataaaaaacacaccgcacaaagacg 19745526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 19794138 - 19794280
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||  ||| ||||||||||| ||||| ||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||||||| ||||    
T  19794138 tcatgtctcccgatctgcaacattgacgacgctaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaacaaac 19794237  T
Q  114 attgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |   ||||||||| | | |||||| ||||| || || ||||||    
T  19794238 acctcactaagacgggaaataaaaaacacaccgcacaaagacg 19794280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 22621689 - 22621610
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||| |||| |||| ||||||  |||||  |||||||| ||||| |||  |||||||||||| |||||||||||||||    
T  22621689 tgcaacgttgacgacgtcaaagtctttgattagatttgcacttgttaaaaactaatctttcaacctgaatcaaataaaca 22621610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 24100374 - 24100319
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| | || ||| |||||| |||||||||||| |||||||||||||||    
T  24100374 attgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaaca 24100319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 26742350 - 26742417
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| | || ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  26742350 attgatcggatctacacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcactaagac 26742417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 29923069 - 29923014
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| ||| || |||||||||||| |||||||||||||||    
T  29923069 attgatcggatctgcacttgctcatagctaatctttcaacctgaatcaaataaaca 29923014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 51152358 - 51152303
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||||    
T  51152358 attgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaaca 51152303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 13169285 - 13169383
Alignment:
Q  16 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||| |||  || |||||| ||||||| |||| |||  ||||| | ||||||| ||| |||||  |||||||||||  |||||||||||||||    
T  13169285 atattcatgtttctgaatctgcaacgttgatgatgccacagtcgttgattgaatttgcacttgatcaaaactaatctttcaatctgaatcaaataaaca 13169383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 29268685 - 29268731
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||| ||||||||||| |||||||||||||||  ||||||||||    
T  29268685 tcaaagtcaatctttcaacctgaatcaaataaacaccgcactaagac 29268731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Original strand, 43493186 - 43493240
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||    
T  43493186 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacacagcactaaga 43493240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 28837299 - 28837230
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 128  Q
    |||| |||||| | || ||| |||||| |||||||||||| ||||| |||||||||  ||||||||||||    
T  28837299 attgttcggatcttcacttgctcaaagctaatctttcaacgtgaattaaataaacaccgcactaagacag 28837230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 81 - 122
Target Start/End: Original strand, 45681836 - 45681877
Alignment:
Q  81 caaagttaatctttcaacttgaatcaaataaacattgcacta 122  Q
    |||||||||||||||||| ||||||||||||| | |||||||    
T  45681836 caaagttaatctttcaacatgaatcaaataaatagtgcacta 45681877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 7 - 116
Target Start/End: Original strand, 54548973 - 54549082
Alignment:
Q  7 aatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatca 106  Q
    ||||||||||||||||||| ||| ||| ||||| | |||  | || ||| | |||||| |||| | || ||| |||||||| ||||| ||||  ||||||    
T  54548973 aatatgactatattcatgtttctggatttgcaataatgacaatgcaaaaatcattgatgggatctacacttgctcaaagtttatcttccaacccgaatca 54549072  T
Q  107 aataaacatt 116  Q
    ||||||||||    
T  54549073 aataaacatt 54549082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 6082287 - 6082367
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    |||||| |||| || |||||| | ||||| || || |||| ||| |||||| |||||||||||| | ||||||||||||||    
T  6082287 tgcaacgttgacgatgccaaaatcattgaccgaatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacat 6082367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 39523644 - 39523576
Alignment:
Q  59 attgatcggatttgcatttgttcaaagt-taatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||   |||||||||||| |||||||||||||||  ||||||||||    
T  39523644 attgatcggatctgcacttgctcaaaaactaatctttcaacctgaatcaaataaacaccgcactaagac 39523576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 2e-23; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 15589936 - 15590050
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaag------ttattgatcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| ||||||||||| ||||||||||      | |||||||||||||||| ||| |||||| ||||||||||||     
T  15589936 taatatgactatattcatgtctccggatctgcaacattgacgacgccaaagccattgtcattgatcggatttgcacttgctcaaagctaatctttcaacc 15590035  T
Q  100 tgaatcaaataaaca 114  Q
    |||||||||||||||    
T  15590036 tgaatcaaataaaca 15590050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 13871468 - 13871604
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 119  Q
    |||||||||  ||| |||||| |||| ||||||||||| ||||||| |||||||| ||| ||||||  |||||| |||| ||||||||||||||| ||||    
T  13871468 tcatgtctccggatctgcaacgttgacgacgccaaagtcattgatcagatttgcacttgctcaaagcaaatcttccaacctgaatcaaataaacactgca 13871567  T
Q  120 ctaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||| | | |||||| ||||| || || ||||||    
T  13871568 ctaagacggaaaataaaaaacacaccgcacaaagacg 13871604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 8693482 - 8693608
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| |||||| |||| ||| ||||||| ||||      ||||||| |||| ||| |||||| ||||||||||||     
T  8693482 taatatgactatattcatgtctccggatctgcaacgttgacgacaccaaagtcattgtccttgatcggatctgcacttgctcaaagctaatctttcaacc 8693581  T
Q  100 tgaatcaaataaacattgcactaagac 126  Q
    ||||||||||||||| |||||||||||    
T  8693582 tgaatcaaataaacactgcactaagac 8693608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 6296136 - 6296233
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||| | | |||||| ||||| || || ||||||    
T  6296136 attgatcggatctgcatttgctcaaagttaatcttttaacctgaatcaaataaacactgcactaagacggaaaataaaaaacacaccgcacaaagacg 6296233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 6302946 - 6303043
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||||||| ||||||||||||||| ||| ||||||||||||||| ||||||||||| | | |||||| ||||| || || ||||||    
T  6302946 attgatcggatctgcatttgctcaaagttaatcttttaacctgaatcaaataaacactgcactaagacggaaaataaaaaacacaccgcacaaagacg 6303043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 45 - 126
Target Start/End: Complemental strand, 7076790 - 7076709
Alignment:
Q  45 atgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||| |||||||||| | | ||||||| ||| |||||||||||||||||||||| | |||||||||| |||||||||||    
T  7076790 atgacgctaaagttattggttgaatttgcacttgatcaaagttaatctttcaacttggaacaaataaacactgcactaagac 7076709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 2304725 - 2304792
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  2304725 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 2304792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 31705399 - 31705332
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||  ||||||||||    
T  31705399 attgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 31705332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 31937307 - 31937374
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||  ||||||||||    
T  31937307 attgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 31937374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 37 - 111
Target Start/End: Original strand, 34503768 - 34503842
Alignment:
Q  37 caacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 111  Q
    |||||||||||| ||||||||||||||| | ||||||| ||| || ||||| |||||||||||| ||||||||||    
T  34503768 caacattgatgatgccaaagttattgattgaatttgcacttgatcgaagtttatctttcaacttaaatcaaataa 34503842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 112
Target Start/End: Original strand, 23101295 - 23101348
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 112  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||    
T  23101295 attgatcggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaa 23101348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 12481257 - 12481324
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||  ||||||||||||||||||||||| | |||||||||||||  ||||||||||    
T  12481257 attgatcggatctgctcttgttcaaagttaatctttcaacctaaatcaaataaacaccgcactaagac 12481324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 23654484 - 23654417
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||  |||||||||| |||||||||||| |||||||||||||||  ||||||||||    
T  23654484 attgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 23654417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 35219800 - 35219867
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||| ||| |||||| |||| ||||||| |||||||||||||||  ||||||||||    
T  35219800 attgatcggatttgcacttgctcaaagctaatttttcaacctgaatcaaataaacaccgcactaagac 35219867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 26 - 156
Target Start/End: Original strand, 4921735 - 4921865
Alignment:
Q  26 ctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    |||| ||| |||||| |||| |||  |||||| ||||||||||| |||| ||| |||||| |||||||||||| || ||||||||||||  ||| |||||    
T  4921735 ctctggatctgcaacgttgacgacaacaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctggatcaaataaacaccgcagtaaga 4921834  T
Q  126 cagtatataaaagacacatcgtacgaagacg 156  Q
    | | | || ||| |||||||| || ||||||    
T  4921835 cgggaaatcaaaaacacatcgcacaaagacg 4921865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 80 - 156
Target Start/End: Original strand, 6419766 - 6419842
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||||| |||||||||||| |||| |||||||||||||||||||||| | | |||||| ||||| || || ||||||    
T  6419766 tcaaagctaatctttcaacctgaaccaaataaacattgcactaagacgggaaataaaaaacacaccgcacaaagacg 6419842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 1106754 - 1106821
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||| ||| |||| ||| |||||| |||||||||||| |||||||||||||||| | ||||||||    
T  1106754 attgatcagatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgtactaagac 1106821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 27135369 - 27135279
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||| |||| | |||||| | || | |||||| |||||| ||||| ||||| || |||||||||||||| ||||||||||    
T  27135369 tgcaacattgatgacgacaaaatcattgattgaatctacatttgctcaaagataatcgttcaa-ttaaatcaaataaacatcgcactaagac 27135279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 72 - 126
Target Start/End: Original strand, 23638020 - 23638074
Alignment:
Q  72 gcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  23638020 gcatttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 23638074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 3359011 - 3358950
Alignment:
Q  53 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||||| |||| |||||||| |||||  || ||||||||| |||||||||||||||    
T  3359011 aaagttattgattggatatgcatttgatcaaaactactctttcaacctgaatcaaataaaca 3358950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 65 - 126
Target Start/End: Original strand, 19402703 - 19402764
Alignment:
Q  65 cggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  19402703 cggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 19402764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 127
Target Start/End: Complemental strand, 2488371 - 2488303
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 127  Q
    ||||||||||| | || ||| ||||||||||||||||||| ||||| | |||||||  |||||||||||    
T  2488371 attgatcggatctacacttgctcaaagttaatctttcaacctgaataagataaacaccgcactaagaca 2488303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 125
Target Start/End: Complemental strand, 4394002 - 4393938
Alignment:
Q  61 tgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    ||||| ||| |||| ||| ||||||||||||||||||| ||| |||||||||||  |||||||||    
T  4394002 tgatcagatctgcacttgatcaaagttaatctttcaacctgagtcaaataaacaccgcactaaga 4393938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 12342971 - 12342927
Alignment:
Q  82 aaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||    
T  12342971 aaagttaatatttcaacatgaatcaaataaacattacactaagac 12342927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 82 - 126
Target Start/End: Complemental strand, 29284964 - 29284920
Alignment:
Q  82 aaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||    
T  29284964 aaagctaatctttcaacttgaatcaaataaacaccgcactaagac 29284920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Original strand, 12654166 - 12654245
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||| |||||||||||||||| ||||||| ||| | || ||| |||||  || ||||||||| | |||||||||||||    
T  12654166 tgcaacgttgatgacgccaaagtcattgatcagatctacacttgctcaaaactagtctttcaacctaaatcaaataaaca 12654245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 114
Target Start/End: Original strand, 1915082 - 1915128
Alignment:
Q  68 atttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||| ||||||| || |||||||||||| |||||||||||||||    
T  1915082 atttgcacttgttcatagctaatctttcaacctgaatcaaataaaca 1915128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 68 - 117
Target Start/End: Complemental strand, 14730847 - 14730798
Alignment:
Q  68 atttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattg 117  Q
    ||||||| ||| | |||||||||| |||||| ||||||||||||||||||    
T  14730847 atttgcacttgattaaagttaatcattcaacctgaatcaaataaacattg 14730798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 80 - 124
Target Start/End: Original strand, 15985868 - 15985912
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcactaag 124  Q
    ||||| ||||||||||||||| |||||||||||||| ||| ||||    
T  15985868 tcaaaattaatctttcaacttaaatcaaataaacatagcattaag 15985912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 9e-23; HSPs: 37)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 17687478 - 17687384
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||  ||| |||||||||||||||| |||||| ||||||||||| |||||||| ||||| ||||||||||||  |||||||||||||||    
T  17687478 tcatgtctccggatctgcaacattgatgacgtcaaagtcattgatcggatatgcatttgctcaaatttaatctttcaatctgaatcaaataaaca 17687384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 6635482 - 6635415
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||  ||||||||||    
T  6635482 attgatcggatctgcatttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactaagac 6635415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 7771708 - 7771774
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    ||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  7771708 attgatcggatctgcacttgctcaaagttaatctttcaacttgaatcaaataaacaccgcactaaga 7771774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 6281278 - 6281211
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||| ||||||||||    
T  6281278 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagac 6281211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 126
Target Start/End: Original strand, 11734648 - 11734773
Alignment:
Q  7 aatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaactt 100  Q
    |||||||||||||||| |||||  ||| |||||| |||| ||||||||||| ||||      ||||||| |||| |||  ||||| |||||||||||  |    
T  11734648 aatatgactatattcaagtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcagttgcgcaaagctaatctttcaatct 11734747  T
Q  101 gaatcaaataaacattgcactaagac 126  Q
    ||||||||||||||| ||||||||||    
T  11734748 gaatcaaataaacatcgcactaagac 11734773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 17732273 - 17732339
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    ||||||||||||| || ||| |||||| ||||||||||||||||||||||||||||  |||||||||    
T  17732273 attgatcggatttacacttgctcaaagctaatctttcaacttgaatcaaataaacaccgcactaaga 17732339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 25962196 - 25962086
Alignment:
Q  16 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    |||| ||||||||  ||| | |||| |||| ||||| ||||| ||||||| ||| |||| ||| |||||  |||||||||||| |||||||||||||||     
T  25962196 atatccatgtctccggatctacaacgttgacgacgcaaaagtcattgatcagatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacac 25962097  T
Q  116 tgcactaagac 126  Q
    |||||||||||    
T  25962096 tgcactaagac 25962086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 29098068 - 29097956
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||||||| |||||| |||| |||||||||      || ||||||||||| |||  |||||||||| |||| ||||||| ||||||||||||||    
T  29098068 tcatgtctcttgatctgcaacgttgacgacgccaaaatcattgtcattgatcggatctgctcttgttcaaagctaatttttcaacctgaatcaaataaac 29097969  T
Q  114 attgcactaagac 126  Q
    |  ||||||||||    
T  29097968 accgcactaagac 29097956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 126
Target Start/End: Complemental strand, 11858141 - 11858077
Alignment:
Q  62 gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||| |||| ||| ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  11858141 gatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 11858077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 71 - 119
Target Start/End: Complemental strand, 35402257 - 35402209
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 119  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  35402257 tgcacttgttcaaagttaatctttcaacctgaatcaaataaacattgca 35402209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 37 - 137
Target Start/End: Complemental strand, 39915749 - 39915649
Alignment:
Q  37 caacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaa 136  Q
    |||| |||| |||| ||||||||||||| |||| |||| ||| |||||| |||||||||||| ||||| |||||||||  |||||| ||||| | |||||    
T  39915749 caacgttgacgacgtcaaagttattgattggatatgcacttgctcaaagctaatctttcaacctgaataaaataaacaccgcactatgacaggaaataaa 39915650  T
Q  137 a 137  Q
    |    
T  39915649 a 39915649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 3079221 - 3079288
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| ||||||  |||||||||||| ||||||||||||||| ||||||||||    
T  3079221 attgatcggatctgcacttgctcaaagcaaatctttcaactcgaatcaaataaacatcgcactaagac 3079288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 17096128 - 17096183
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||||||| |||||| |||||||||||| |||||||||||||||    
T  17096128 attgatcggatctgcatttgctcaaagctaatctttcaacctgaatcaaataaaca 17096183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 23882003 - 23882070
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| || | ||| ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  23882003 attgatcggatctgtacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 23882070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 33164355 - 33164422
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||  |||||||||| |||||||||||| |||||||||||||||  ||||||||||    
T  33164355 attgatcggatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 33164422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 7 - 114
Target Start/End: Complemental strand, 3740649 - 3740536
Alignment:
Q  7 aatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaactt 100  Q
    ||||||||||||||||||| ||  ||| ||||||||| | ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| |    
T  3740649 aatatgactatattcatgtatccggatctgcaacattaacgacgccaaagtcattgtcattgatcggatctgcagttgctcaaagctaatctttcaacct 3740550  T
Q  101 gaatcaaataaaca 114  Q
    |||| |||||||||    
T  3740549 gaattaaataaaca 3740536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 22 - 120
Target Start/End: Complemental strand, 7151082 - 7150984
Alignment:
Q  22 atgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcac 120  Q
    |||||||| ||| |||||| |||||||||||||||| |||||||| ||||| | ||  |||||   | ||||||||| |||||||||||||||| ||||    
T  7151082 atgtctctggatctgcaacgttgatgacgccaaagtcattgatcgaatttgtacttactcaaaaccagtctttcaacctgaatcaaataaacatcgcac 7150984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 34431292 - 34431197
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| |||||||||||||  |||| |||||||||||||||  |||||||||||| | |||||| ||||| || || ||||||    
T  34431292 attgatcggatctgcacttgctcaaagttaatct--caacctgaatcaaataaacaccgcactaagacaggaaataaaaaacacaccgcacaaagacg 34431197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 39531254 - 39531363
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttatt----gatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    |||||||||| ||| |||||| |||| ||||||||||| |||    |||||||| |||| ||  |||||| ||||||||||||  |||||||||||||||    
T  39531254 tcatgtctctggatctgcaacgttgacgacgccaaagtcattcattgatcggatctgcactttctcaaagctaatctttcaacccgaatcaaataaacat 39531353  T
Q  116 tgcactaaga 125  Q
     | |||||||    
T  39531354 cgtactaaga 39531363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 66 - 137
Target Start/End: Complemental strand, 374509 - 374438
Alignment:
Q  66 ggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaa 137  Q
    |||| |||| ||| ||||||||| ||||||||||||||||||| |||||  |||||||||||| | ||||||    
T  374509 ggatatgcacttgatcaaagttactctttcaacttgaatcaaacaaacaccgcactaagacagaaaataaaa 374438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 980916 - 980983
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||| |||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  980916 attgctcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 980983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 17699817 - 17699703
Alignment:
Q  35 tgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 128  Q
    ||||||||||| ||||||||||||||||      ||| ||| || | ||| |||||| |||||||||||| ||||||||||||||  ||||||||||| |    
T  17699817 tgcaacattgacgacgccaaagttattgtcattgatcagatctgtacttgctcaaagctaatctttcaacctgaatcaaataaacgatgcactaagacgg 17699718  T
Q  129 tatataaaagacaca 143  Q
     | |||||| |||||    
T  17699717 gaaataaaaaacaca 17699703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 20483420 - 20483365
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||||||||||||||| |||||||||||    
T  20483420 attgatcggatctgcacttgatcaaagctaatctttcaacttgagtcaaataaaca 20483365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 146
Target Start/End: Original strand, 26294885 - 26295031
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| |||||| || | ||| ||||||| ||||      ||| ||| |||| ||| |||||  |||| |||||||     
T  26294885 taatatgactatattcatgtctccggatctgcaacgttaacgacaccaaagtcattgtcattgatcagatctgcacttgctcaaaactaatatttcaacc 26294984  T
Q  100 tgaatcaaataaacattgcactaagacagtatataaaagacacatcg 146  Q
    |||||||||||||||  |||||||||| | | || ||||||||||||    
T  26294985 tgaatcaaataaacaccgcactaagacggaaaatcaaagacacatcg 26295031  T

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Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 76 - 126
Target Start/End: Complemental strand, 25487825 - 25487775
Alignment:
Q  76 ttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||| |||||| |||||||||| ||||||||||||||| |||||||||||    
T  25487825 ttgtttaaagttgatctttcaacctgaatcaaataaacaatgcactaagac 25487775  T

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Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 71 - 144
Target Start/End: Original strand, 26240577 - 26240650
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacat 144  Q
    |||||||  |||||||||||| |||||| ||||||||||||||||  ||||||||| | | |||||| ||||||    
T  26240577 tgcatttcatcaaagttaatcgttcaacctgaatcaaataaacatcacactaagacggaaaataaaaaacacat 26240650  T

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Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 53 - 126
Target Start/End: Complemental strand, 32309404 - 32309331
Alignment:
Q  53 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||| ||||||  |||||||| ||| |||||||||||||| |||| ||||||||||||| || | ||||||||    
T  32309404 aaagtcattgattcgatttgcacttgctcaaagttaatcttacaacctgaatcaaataaatatcgtactaagac 32309331  T

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Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 32347556 - 32347656
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||  ||| |||||  |||| ||||||||||||||||      ||||||| |||| ||| |||||| |||||||||||||||||| ||||||||    
T  32347556 tcatgtctccggatctgcaatgttgacgacgccaaagttattgtcatcgatcggatctgcacttgctcaaagctaatctttcaacttgaattaaataaac 32347655  T
Q  114 a 114  Q
    |    
T  32347656 a 32347656  T

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Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 115
Target Start/End: Original strand, 35275856 - 35275929
Alignment:
Q  42 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    |||| |||||||||||||||||| |||| || | ||| |||||| ||| ||||||||  |||||||||||||||    
T  35275856 ttgacgacgccaaagttattgattggatctgtacttgctcaaagctaacctttcaaccggaatcaaataaacat 35275929  T

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Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 42609378 - 42609322
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    |||||||| || |||| ||| |||||| |||||||||||| ||||||||||||||||    
T  42609378 attgatcgaatatgcacttgctcaaagctaatctttcaacatgaatcaaataaacat 42609322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 43494094 - 43494030
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaa 123  Q
    |||||| |||| |||| ||| ||||||||| ||||||||| |||||||||||||||  |||||||    
T  43494094 attgattggatatgcacttgctcaaagttagtctttcaacctgaatcaaataaacaccgcactaa 43494030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 12215390 - 12215312
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||| |||| ||||| ||||| ||||||||||| |||| ||| |||||  |||||||||||| | |||||||||||||    
T  12215390 tgcaacgttgacgacgcaaaagtcattgatcggatatgcacttgctcaaaactaatctttcaac-taaatcaaataaaca 12215312  T

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Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 17331562 - 17331495
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||| |||||| |||  |||||||||  |||||||||||| |||||||||||||||  ||||||||||    
T  17331562 attggtcggatctgctcttgttcaaaactaatctttcaacctgaatcaaataaacaccgcactaagac 17331495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 23428486 - 23428419
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| | || ||| |||||| ||||||||| || |||||||||||||||  ||||||||||    
T  23428486 attgatcggatctacacttgctcaaagctaatctttctacctgaatcaaataaacaccgcactaagac 23428419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 68 - 126
Target Start/End: Original strand, 39531633 - 39531691
Alignment:
Q  68 atttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||| ||| | |||| |||||||||||| |||||||||||| ||||| ||||||||    
T  39531633 atttgcacttgattaaagctaatctttcaacctgaatcaaataagcattgtactaagac 39531691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 65 - 125
Target Start/End: Complemental strand, 12891904 - 12891844
Alignment:
Q  65 cggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    ||||| |||| ||| |||||| |||||||||||| || ||||||||||||  |||||||||    
T  12891904 cggatctgcacttgctcaaagctaatctttcaacctggatcaaataaacaccgcactaaga 12891844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 70 - 126
Target Start/End: Complemental strand, 34906376 - 34906320
Alignment:
Q  70 ttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||| ||| |||||| ||| |||||||| | ||||||||||||||| |||||||||    
T  34906376 ttgcacttgctcaaagctaaactttcaaccttaatcaaataaacattacactaagac 34906320  T

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Target: chr8 (Bit Score: 52; Significance: 5e-21; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 4757458 - 4757332
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    ||||||||||||||||| |||||  ||| |||||| |||| ||||||||||| ||||      ||||||| |||| ||| |||||| ||||||||||||     
T  4757458 taatatgactatattcaagtctccggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaacc 4757359  T
Q  100 tgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||| ||||||||||    
T  4757358 tgaatcaaataaacatcgcactaagac 4757332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 37612946 - 37612820
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||| ||  ||| |||||| |||| ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||||    
T  37612946 taatatgactatattcatgtatccggatctgcaacgttgaagacgccaaagtcattgtcattgatcggatctgcaattgctcaaagctaatctttcaact 37612847  T
Q  100 tgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||  ||||||||||    
T  37612846 tgaatcaaataaacaccgcactaagac 37612820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 3204684 - 3204747
Alignment:
Q  63 atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||| |||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||    
T  3204684 atcggatatgcacttgctcaaagttaatctttcaacttgaatcaaataaacactgcactaagac 3204747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 10334449 - 10334343
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 119  Q
    |||||||||  ||| |||||| |||| || |||||||| ||||||||||| |||||||| |||||| |||| ||||||  |||||||||||||||  |||    
T  10334449 tcatgtctccggatctgcaacgttgacgatgccaaagtcattgatcggatctgcatttgctcaaagctaatatttcaatctgaatcaaataaacaccgca 10334350  T
Q  120 ctaagac 126  Q
    |||||||    
T  10334349 ctaagac 10334343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 32778813 - 32778907
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||  ||| |||||  |||| ||||| ||||| ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||    
T  32778813 tcatgtctccagatctgcaaagttgacgacgcaaaagtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaaca 32778907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 156
Target Start/End: Complemental strand, 9501879 - 9501723
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagtt------attgatcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| |||||| |||| ||  |||||||       |||||||||||||||| ||| |||||| ||||||||||||     
T  9501879 taatatgactatattcatgtctccggatttgcaacgttgacgaaaccaaagtcgttgtcattgatcggatttgcacttgctcaaagctaatctttcaacc 9501780  T
Q  100 tgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||||||||||||||  |||| ||||| | | |||||| ||| | ||||| ||||||    
T  9501779 tgaatcaaataaacaccgcacaaagacgggaaataaaaaacaaaccgtacaaagacg 9501723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 56 - 145
Target Start/End: Original strand, 10338714 - 10338803
Alignment:
Q  56 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatc 145  Q
    |||||||||||||| |||| ||| |||||| |||| |||||||||||||||||||||||  |||||||||| | | |||||| |||||||    
T  10338714 gttattgatcggatctgcacttgctcaaagctaatttttcaacttgaatcaaataaacaccgcactaagacgggaaataaaaaacacatc 10338803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 31202692 - 31202595
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||| ||| |||| ||| ||||||||||||||||||| ||||||||||||||| ||||||||||| | | || ||| ||||| ||||| ||||||    
T  31202692 attgatcagatctgcacttgatcaaagttaatctttcaacctgaatcaaataaacactgcactaagactggaaatcaaaaacacaccgtacaaagacg 31202595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 31407643 - 31407740
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||||| | || ||| |||||||| || ||||||    
T  31407643 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacaggaaatcaaaaacacatcgcacaaagacg 31407740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 13576065 - 13576173
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatata 134  Q
    ||||||||||| || ||||||||  |||||||||| |||| ||| ||||||||||||||||||  |||||| ||||||||  |||||||||| | | |||    
T  13576065 tgcaacattgaagatgccaaagtcgttgatcggatctgcacttgctcaaagttaatctttcaatctgaatctaataaacaccgcactaagacggaaaata 13576164  T
Q  135 aaagacaca 143  Q
    ||| |||||    
T  13576165 aaaaacaca 13576173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 59 - 123
Target Start/End: Complemental strand, 24700066 - 24700002
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaa 123  Q
    ||||||||||| |||||||| ||||||||||||||||||| |||||||||||||||  |||||||    
T  24700066 attgatcggatctgcatttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaa 24700002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 38546048 - 38546116
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 127  Q
    ||||||||||| |||||||| ||||||||||||||||||  |||||||||||||||| | |||||||||    
T  38546048 attgatcggatatgcatttggtcaaagttaatctttcaatctgaatcaaataaacatcgtactaagaca 38546116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 43937072 - 43937139
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  43937072 attgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 43937139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 43 - 143
Target Start/End: Complemental strand, 2968782 - 2968682
Alignment:
Q  43 tgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacac 142  Q
    ||||||| ||||||| |||||||||||||||| ||| ||||||   |||||||||| ||||||||||||| |  |||||||||| | | |||||| ||||    
T  2968782 tgatgacaccaaagtcattgatcggatttgcacttgctcaaagcggatctttcaacctgaatcaaataaataccgcactaagacggaaaataaaaaacac 2968683  T
Q  143 a 143  Q
    |    
T  2968682 a 2968682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 7579705 - 7579847
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||| ||| |||||| |||  ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| ||||||||||||||    
T  7579705 tcatgtctctggatctgcaacgttggcgacgccaaagtcattgtcattaatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 7579804  T
Q  114 attgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |  |||||||||| | | |||||| ||||| || || ||||||    
T  7579805 accgcactaagacgggaaataaaaaacacaacgcacaaagacg 7579847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 14600593 - 14600660
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  14600593 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 14600660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 2234362 - 2234432
Alignment:
Q  56 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||||  ||||||||||    
T  2234362 gttattgatcggatctgcacttgctcaaagctaatatttcaacctgaatcaaataaacaccgcactaagac 2234432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Original strand, 37128379 - 37128449
Alignment:
Q  56 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||  ||||||||||    
T  37128379 gttattgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacaccgcactaagac 37128449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 114
Target Start/End: Complemental strand, 19489069 - 19489008
Alignment:
Q  53 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||| |||||| | ||||||| ||| ||||||||||||||||||| |||||||||||||||    
T  19489069 aaagtcattgattgaatttgcacttgatcaaagttaatctttcaacctgaatcaaataaaca 19489008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 41361966 - 41361869
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||| || | | |||||| ||||| || || ||||||    
T  41361966 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaaaacgggaaataaaaaacacaccgcacaaagacg 41361869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 127
Target Start/End: Original strand, 13570634 - 13570702
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 127  Q
    ||||||| ||| |||| ||| |||||| ||||||||||||||||||||||||||||   ||||||||||    
T  13570634 attgatcagatctgcacttgctcaaagctaatctttcaacttgaatcaaataaacaccacactaagaca 13570702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 1810117 - 1810184
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||||| || ||| |||||  |||||||||||| |||||||||||||||| || |||||||    
T  1810117 attgatcggatttacacttgctcaaaactaatctttcaacctgaatcaaataaacatcgcgctaagac 1810184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 2025119 - 2025186
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  2025119 attgatcggatctgcacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcactaagac 2025186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 15288665 - 15288719
Alignment:
Q  8 atatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg 62  Q
    |||||||||||||||||||||| ||| |||||| |||| ||||||||||| ||||    
T  15288665 atatgactatattcatgtctctggatttgcaacgttgacgacgccaaagtcattg 15288719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 15469034 - 15469088
Alignment:
Q  8 atatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg 62  Q
    |||||||||||||||||||||| ||| |||||| |||| ||||||||||| ||||    
T  15469034 atatgactatattcatgtctctggatttgcaacgttgacgacgccaaagtcattg 15469088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 28297002 - 28297068
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    ||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||  |||||||||    
T  28297002 attgatcggatctgcagttgctcaaatctaatctttcaacctgaatcaaataaacaccgcactaaga 28297068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 143
Target Start/End: Original strand, 39067539 - 39067668
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||| ||| |||||| |||  ||||||||||| ||||      ||||||| |||| ||| |||||| |||||||||||| |||||| |||||||    
T  39067539 tcatgtctctggatctgcaacgttggcgacgccaaagtcattgtcatcgatcggatctgcacttgctcaaagctaatctttcaacatgaatctaataaac 39067638  T
Q  114 attgcactaagacagtatataaaagacaca 143  Q
    |  |||||||||| | | |||||| |||||    
T  39067639 accgcactaagacggaaaataaaaaacaca 39067668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 126
Target Start/End: Complemental strand, 24210473 - 24210408
Alignment:
Q  61 tgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||| | || |||||||||| |||||||||||| ||||||||||||| |  ||||||||||    
T  24210473 tgatcggatctacacttgttcaaagctaatctttcaacctgaatcaaataaataccgcactaagac 24210408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 114
Target Start/End: Original strand, 24791018 - 24791118
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||| ||| |||||| |||| ||||||||||| ||||      |||||||||||| ||| |||||  |||||||||||| ||| ||||||||||    
T  24791018 tcatgtctctggatctgcaacgttgacgacgccaaagtcattgtcattgatcggatttgcacttgctcaaaactaatctttcaacctgattcaaataaac 24791117  T
Q  114 a 114  Q
    |    
T  24791118 a 24791118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 10952152 - 10952232
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    ||||||||||||||||||||| | ||| || | ||||||| ||| |||||    |||||||||| ||||||||||||||||    
T  10952152 tgcaacattgatgacgccaaaataattaattgaatttgcacttgatcaaatcgtatctttcaacctgaatcaaataaacat 10952232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 115
Target Start/End: Original strand, 10960157 - 10960237
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    ||||||||||||||||||||| | ||| || | ||||||| ||| |||||    |||||||||| ||||||||||||||||    
T  10960157 tgcaacattgatgacgccaaaataattaattgaatttgcacttgatcaaatcgtatctttcaacctgaatcaaataaacat 10960237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 10148179 - 10148124
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||||    
T  10148179 attgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaaca 10148124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 11162117 - 11162062
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||| ||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  11162117 attgatcagatatgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 11162062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 111
Target Start/End: Complemental strand, 19720246 - 19720191
Alignment:
Q  56 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 111  Q
    |||||||||||||  |||| ||| |||||| |||||||||||| ||||||||||||    
T  19720246 gttattgatcggacctgcacttgctcaaagctaatctttcaacctgaatcaaataa 19720191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 126
Target Start/End: Complemental strand, 22787714 - 22787659
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||  |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  22787714 tgcatttactcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 22787659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 71 - 126
Target Start/End: Original strand, 30026789 - 30026844
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  30026789 tgcacttgctcaaagctaatctttcaacatgaatcaaataaacaccgcactaagac 30026844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 12329861 - 12329764
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| |||||| |||| ||||||| | |||||||||||||  ||| |||||| | | |||||| ||||| || || ||||||    
T  12329861 attgatcggatctgcacttgctcaaagctaatttttcaacctaaatcaaataaacaccgcattaagacgggaaataaaaaacacaccgcacaaagacg 12329764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 52 - 125
Target Start/End: Original strand, 22956446 - 22956519
Alignment:
Q  52 caaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    |||||||| |||| |||| | |||||| |||||  |||| ||| ||||||||||||||||| || |||||||||    
T  22956446 caaagttaatgattggatctacatttgatcaaaactaattttttaacttgaatcaaataaatatcgcactaaga 22956519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 71 - 115
Target Start/End: Complemental strand, 20993029 - 20992985
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    |||||||| ||||||||||| |||||||  |||||||||||||||    
T  20993029 tgcatttgctcaaagttaatttttcaaccagaatcaaataaacat 20992985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 115
Target Start/End: Complemental strand, 31308382 - 31308326
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    ||||||||||| |||| |||||||||  || ||||||||| ||||| ||||||||||    
T  31308382 attgatcggatctgcacttgttcaaaactattctttcaacctgaattaaataaacat 31308326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 5e-21; HSPs: 56)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 6 - 158
Target Start/End: Complemental strand, 32314735 - 32314577
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    ||||||||||||||| |||||||  ||| |||||| |||| ||||||||||||||||      ||| ||| |||| ||| |||||| ||||||||||||     
T  32314735 taatatgactatatttatgtctccggatctgcaacgttgacgacgccaaagttattgtcattgatcagatctgcacttgctcaaagctaatctttcaacc 32314636  T
Q  100 tgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacgag 158  Q
    |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||||    
T  32314635 tgaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagacgag 32314577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 5754559 - 5754455
Alignment:
Q  22 atgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcact 121  Q
    |||||||  ||| |||||| |||| ||| ||||||| ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  |||||    
T  5754559 atgtctccggatctgcaacgttgacgacaccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcact 5754460  T
Q  122 aagac 126  Q
    |||||    
T  5754459 aagac 5754455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 34471239 - 34471147
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 112  Q
    |||||||||| ||| |||||| ||||  |||||||||| |||||| |||| |||| ||| ||||||||||||||||||| |||||||||||||    
T  34471239 tcatgtctctagatctgcaacgttgacaacgccaaagtcattgattggatctgcacttgctcaaagttaatctttcaacatgaatcaaataaa 34471147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 6 - 126
Target Start/End: Original strand, 18089225 - 18089351
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| ||||||  ||| || |||||||| ||||      ||||||| |||| ||| |||||| |||||||||||||    
T  18089225 taatatgactatattcatgtctccggatctgcaacgctgacgaagccaaagtcattgtcattgatcggatctgcacttgctcaaagctaatctttcaact 18089324  T
Q  100 tgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||  ||||||||||    
T  18089325 tgaatcaaataaacaccgcactaagac 18089351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 36868287 - 36868175
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    ||||||||| |||| |||||| |||| ||||||||||| ||||      | |||||||||| ||| ||||||||||||||||||| ||||||||||||||    
T  36868287 tcatgtctcctgatctgcaacgttgacgacgccaaagtcattgtcattgaacggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaac 36868188  T
Q  114 attgcactaagac 126  Q
    |  ||||||||||    
T  36868187 accgcactaagac 36868175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 156
Target Start/End: Original strand, 43473956 - 43474112
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| |||||  |||| ||||||||||| ||||      ||| ||| |||| ||| |||||| ||||||||||||     
T  43473956 taatatgactatattcatgtctccagatctgcaatgttgacgacgccaaagtcattgtcattgatcagatctgcacttgctcaaagctaatctttcaacc 43474055  T
Q  100 tgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||||||||||||||  |||||||||| | | || ||| ||||| ||||| ||||||    
T  43474056 tgaatcaaataaacaccgcactaagacgggaaatcaaaaacacaccgtacaaagacg 43474112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 6 - 143
Target Start/End: Original strand, 28261716 - 28261859
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagtt------attgatcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| |||||| |||| ||||| ||||||      ||||||||||| |||  ||| |||||  ||||||||||||     
T  28261716 taatatgactatattcatgtctccggatctgcaacgttgacgacgcgaaagttattgtcattgatcggatctgctcttgctcaaaactaatctttcaacc 28261815  T
Q  100 tgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    |||||||||||||||  |||||||||| | | |||||| |||||    
T  28261816 tgaatcaaataaacaccgcactaagacgggaaataaaaaacaca 28261859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 11798386 - 11798477
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||| |||| ||||| ||||| ||||||||||| | ||  || |||||| |||||||||||| |||||||||||||||| ||||||||||    
T  11798386 tgcaacgttgacgacgcaaaagtcattgatcggatctacacctgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagac 11798477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 6431265 - 6431355
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    ||||||||||| ||||| ||||| ||||||| ||| |||  ||| ||||||||||||||||||| |||||||||| ||||  |||||||||    
T  6431265 tgcaacattgacgacgcaaaagtcattgatcagatctgcgcttgctcaaagttaatctttcaacctgaatcaaatcaacaccgcactaaga 6431355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 10286894 - 10286991
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  10286894 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcacaaagacg 10286991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 35 - 128
Target Start/End: Complemental strand, 19904766 - 19904673
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 128  Q
    |||||| ||| |||||| |||||||| ||| | || |||| ||| |||||||||||||||| || |||||||||||||||| ||||||| ||||    
T  19904766 tgcaacgttggtgacgcaaaagttatcgattgaatatgcacttgatcaaagttaatctttctacctgaatcaaataaacatcgcactaaaacag 19904673  T

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Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 28230984 - 28231081
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| |||||| | |||||||||| |||||||||||||||  |||||||||| | |||||||| ||||| || || ||||||    
T  28230984 attgatcggatctgcacttgctcaaagctgatctttcaacctgaatcaaataaacaccgcactaagacgggatataaaaaacacaccgcacaaagacg 28231081  T

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Target: chr2; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 7 - 156
Target Start/End: Original strand, 7072777 - 7072932
Alignment:
Q  7 aatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaactt 100  Q
    ||||||||||||||||||||||  ||| |||||| |||| |||||||||      || |||||| ||||||||| ||  |||||  |||| |||| || |    
T  7072777 aatatgactatattcatgtctccggatctgcaacgttgacgacgccaaagtcattgtcattgattggatttgcacttcctcaaaactaatatttcgacct 7072876  T
Q  101 gaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||||||  |||||||||||| | |||||| ||||| || || ||||||    
T  7072877 gaatcaaataaacaccgcactaagacaggaaataaaaaacacaccgcacaaagacg 7072932  T

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Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 9689872 - 9689956
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||  ||||| |||| | | |||||| |||||    
T  9689872 attgatcggatatgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactgagacgggaaataaaaaacaca 9689956  T

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Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 20124639 - 20124711
Alignment:
Q  42 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||| ||||||||||| |||||||| ||||||| ||| |||||| |||||||||||| ||||| |||||||||    
T  20124639 ttgacgacgccaaagtcattgatcgaatttgcacttgctcaaagctaatctttcaacctgaatgaaataaaca 20124711  T

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Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 4732304 - 4732237
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| | || ||| |||||| ||||||||||||||||||||||||||||  ||||||||||    
T  4732304 attgatcggatctacacttgctcaaagataatctttcaacttgaatcaaataaacaccgcactaagac 4732237  T

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Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 6510696 - 6510649
Alignment:
Q  79 ttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||    
T  6510696 ttcaaagctaatttttcaacttgaatcaaataaacattgcactaagac 6510649  T

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Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 13740547 - 13740614
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||| |||| || | |||||||||| |||||||||||| |||||||||||||||| ||||||||||    
T  13740547 attgattggatctgtacttgttcaaagctaatctttcaacctgaatcaaataaacatcgcactaagac 13740614  T

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Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 13878896 - 13878951
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||    
T  13878896 attgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaaca 13878951  T

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Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 14019021 - 14019076
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||    
T  14019021 attgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaaca 14019076  T

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Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 15920132 - 15920053
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||| |||| ||||||||||| ||||||||||| |||| |||  ||||| |||| ||||||| |||||||||||||||    
T  15920132 tgcaacgttgacgacgccaaagtcattgatcggatctgcacttgcacaaagctaatatttcaacctgaatcaaataaaca 15920053  T

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Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 122
Target Start/End: Complemental strand, 27095999 - 27095877
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    ||||||||| ||||||| |||||  ||| |||||| |||||||||| ||||| ||||      |||||||  | | ||| |||||| |||||||||||||    
T  27095999 taatatgaccatattcaagtctccggatctgcaacgttgatgacgctaaagtcattgtcattgatcggatcagtacttgctcaaagctaatctttcaact 27095900  T
Q  100 tgaatcaaataaacattgcacta 122  Q
    |||||||||||||||| ||||||    
T  27095899 tgaatcaaataaacatcgcacta 27095877  T

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Target: chr2; HSP #23
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 156
Target Start/End: Original strand, 38384299 - 38384441
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||  ||| |||||  |||||||||||||||||||||      ||||||| |||| ||| |||||| |||||||||||| ||||| ||||||||    
T  38384299 tcatgtctccggatctgcaatgttgatgacgccaaagttattgtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaataaaataaac 38384398  T
Q  114 attgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |  |||||||||| | | |||||| ||||| || || ||||||    
T  38384399 accgcactaagacggaaaataaaaaacacaccgcacaaagacg 38384441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 44942520 - 44942453
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||| ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  44942520 attgatcggatttgcacttgctcaaagctaatctttcaagctgaatcaaataaacaccgcactaagac 44942453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 80 - 126
Target Start/End: Original strand, 12994120 - 12994166
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||    
T  12994120 tcaaagctaatctttcaactagaatcaaataaacattgcactaagac 12994166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 60 - 126
Target Start/End: Complemental strand, 33012281 - 33012215
Alignment:
Q  60 ttgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||||||| ||| |||||| |||||||||||| ||||| |||||||||  ||||||||||    
T  33012281 ttgatcggatttgcacttgatcaaagctaatctttcaacctgaattaaataaacaccgcactaagac 33012215  T

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Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 9978511 - 9978623
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||  ||| |||||| ||||||||||||||      || |||||| |||| |||| ||| |||||| |||||||||||| ||||||||||||||    
T  9978511 tcatgtctccggatctgcaacgttgatgacgccaaaatcattgtcattgattggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 9978610  T
Q  114 attgcactaagac 126  Q
    |  ||||||||||    
T  9978611 accgcactaagac 9978623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 128
Target Start/End: Complemental strand, 43696102 - 43696033
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 128  Q
    ||||||| ||| |||| |||||||||| |||| ||||||| |||||||||||||||  ||||||||||||    
T  43696102 attgatcagatctgcacttgttcaaagctaatttttcaacctgaatcaaataaacaccgcactaagacag 43696033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 143
Target Start/End: Complemental strand, 22597369 - 22597285
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    ||||||||||  |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| |||||    
T  22597369 attgatcggacctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacaca 22597285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 59 - 143
Target Start/End: Complemental strand, 35333739 - 35333655
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    ||||||||||| | || ||| |||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| |||||    
T  35333739 attgatcggatctacacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacggaaaataaaaaacaca 35333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 63 - 126
Target Start/End: Original strand, 4426549 - 4426612
Alignment:
Q  63 atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  4426549 atcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 4426612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 4739563 - 4739496
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||  ||||||||||    
T  4739563 attgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacaccgcactaagac 4739496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 11426901 - 11426814
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcacta 122  Q
    ||||||||||| |||| |||||| || |||  ||| |||| ||| |||||| |||||||||||||||||| ||||||| || ||||||    
T  11426901 tgcaacattgacgacgtcaaagtgatcgattagatctgcaattgctcaaagctaatctttcaacttgaatgaaataaatatcgcacta 11426814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 12891005 - 12891060
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  12891005 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 12891060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 20 - 111
Target Start/End: Original strand, 17767408 - 17767499
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 111  Q
    |||||||||  ||| |||||| |||| |||||  |||| ||||||||||| |||| ||| ||||||||||||||| ||| | ||||||||||    
T  17767408 tcatgtctccggatctgcaacgttgacgacgcagaagtcattgatcggatctgcacttgctcaaagttaatcttttaacctaaatcaaataa 17767499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 70 - 157
Target Start/End: Original strand, 26254834 - 26254920
Alignment:
Q  70 ttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacga 157  Q
    ||||| ||| ||||||||||||||||||| | |||||||||||||  ||||||||||| || || ||| |||||||| || |||||||    
T  26254834 ttgcacttgctcaaagttaatctttcaacctaaatcaaataaacaccgcactaagacaata-attaaaaacacatcgcactaagacga 26254920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 32015487 - 32015420
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||  |||||||||||| |||||||||||||||| | ||||||||    
T  32015487 attgatcggatctgcacttgctcaaaactaatctttcaacctgaatcaaataaacatcgtactaagac 32015420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 77 - 127
Target Start/End: Complemental strand, 8781768 - 8781718
Alignment:
Q  77 tgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 127  Q
    ||||||||| |||||||| |||||||||||||||||||  |||||||||||    
T  8781768 tgttcaaagctaatcttttaacttgaatcaaataaacaccgcactaagaca 8781718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 21 - 112
Target Start/End: Complemental strand, 29543071 - 29542974
Alignment:
Q  21 catgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 112  Q
    ||||||||  ||| |||||| ||||||||||||||      || |||||||||||||||| ||| |||||| |||| ||||||| |||||||||||||    
T  29543071 catgtctccggatctgcaacgttgatgacgccaaaatcattgtcattgatcggatttgcacttgctcaaagctaatttttcaacctgaatcaaataaa 29542974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 16 - 114
Target Start/End: Original strand, 45694290 - 45694388
Alignment:
Q  16 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||||   ||| |||||| |||| ||||  ||||| ||||||  ||| |||||||| |||||| |||||||||||| ||| |||||||||||    
T  45694290 atattcatgtcttcggatctgcaacgttgacgacgttaaagtcattgattagatctgcatttgctcaaagataatctttcaacatgagtcaaataaaca 45694388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 125
Target Start/End: Original strand, 7581931 - 7582040
Alignment:
Q  16 atattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    ||||||||||||   ||| | |||| |||| |||| ||||||  ||||| | ||||||| ||| |||||| |||| ||||||| ||||||||||||||||    
T  7581931 atattcatgtcttcggatctacaacgttgacgacgtcaaagtcgttgattgaatttgcacttgctcaaagataatatttcaacctgaatcaaataaacat 7582030  T
Q  116 tgcactaaga 125  Q
     ||| |||||    
T  7582031 ggcattaaga 7582040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 25068069 - 25067989
Alignment:
Q  75 tttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  25068069 tttgttcaaagctaatctttcaacctgaatcaaataaaca-cgcactaagacgggaaataaaaaacacaccgcacaaagacg 25067989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 42 - 143
Target Start/End: Complemental strand, 27666461 - 27666360
Alignment:
Q  42 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagaca 141  Q
    |||||||||| ||||| |||||| | || |||| ||  ||||| ||||||||| ||| |||||||||||||||  |||||||||| | | |||||| |||    
T  27666461 ttgatgacgcaaaagtcattgattgaatatgcacttcatcaaaattaatcttttaacctgaatcaaataaacaccgcactaagacgggaaataaaaaaca 27666362  T
Q  142 ca 143  Q
    ||    
T  27666361 ca 27666360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 59 - 128
Target Start/End: Original strand, 31908704 - 31908772
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacag 128  Q
    ||||||||||| |||| ||| |||||| ||| |||||||| |||||||||||||||  ||||||||||||    
T  31908704 attgatcggatctgcacttgctcaaagctaa-ctttcaacctgaatcaaataaacaccgcactaagacag 31908772  T

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Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 143
Target Start/End: Original strand, 4604194 - 4604278
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    ||||||||||| |||| ||| |||||| || ||||||||| |||||||||||||||   ||||||||| | | |||||| |||||    
T  4604194 attgatcggatctgcacttgctcaaagctagtctttcaacctgaatcaaataaacaccacactaagacgggaaataaaaaacaca 4604278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 155
Target Start/End: Complemental strand, 6593450 - 6593372
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattg---cactaagacagtatataaaagacacatcgtacgaagac 155  Q
    |||||||||||| |||||||||||||||||||||||     ||||||||||| | ||||||  |||||||||| |||||    
T  6593450 tcaaagttaatcattcaacttgaatcaaataaacataataccactaagacagaaaataaaaagcacatcgtacaaagac 6593372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 143
Target Start/End: Complemental strand, 12704921 - 12704837
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    ||||||| ||| |||| ||| |||||| |||||||||||| | |||||||||||||  |||||||||| | | |||||| |||||    
T  12704921 attgatctgatatgcacttgctcaaagctaatctttcaacctaaatcaaataaacaccgcactaagacgggaaataaaaaacaca 12704837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 34416650 - 34416702
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataa 111  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||    
T  34416650 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataa 34416702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 143
Target Start/End: Complemental strand, 38233812 - 38233720
Alignment:
Q  51 ccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    ||||||| |||||| | |||| |||||| |||||| |||||||||||  | ||||||||||||| | ||| ||||||  |||||||| |||||    
T  38233812 ccaaagtcattgattgtatttacatttgatcaaaggtaatctttcaatctaaatcaaataaacactacacaaagacaagatataaaaaacaca 38233720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 53 - 112
Target Start/End: Original strand, 13548782 - 13548841
Alignment:
Q  53 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 112  Q
    ||||| |||||| | || |||||||| |||||| |||||||||||| |||||||||||||    
T  13548782 aaagtcattgattgaatctgcatttgatcaaagctaatctttcaacctgaatcaaataaa 13548841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 34962963 - 34963030
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||| |||| |||| ||| |||||  |||||||||||| |||||||||||||||  ||||||||||    
T  34962963 attgataggatctgcacttgctcaaatctaatctttcaacctgaatcaaataaacaccgcactaagac 34963030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 35 - 114
Target Start/End: Complemental strand, 36080781 - 36080702
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||||||  ||||||| ||| || |||||| || ||| |||||  || |||||||| ||||||||||||||||    
T  36080781 tgcaacattgatgaaaccaaagtcattaattggatttacacttgatcaaaactactctttcaatttgaatcaaataaaca 36080702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 125
Target Start/End: Original strand, 8531425 - 8531515
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    |||||| ||||||||  |||| | |||||| | ||||||| ||| | ||||||| ||||| ||| |||||||||||||||  |||||||||    
T  8531425 tgcaacgttgatgacatcaaattcattgattgaatttgcacttgattaaagttattctttaaacatgaatcaaataaacaccgcactaaga 8531515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 127
Target Start/End: Complemental strand, 17792714 - 17792640
Alignment:
Q  53 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagaca 127  Q
    ||||| |||||| | || |||||||| |||||  |||||||||||| ||||||||||||||| || | |||||||    
T  17792714 aaagtcattgattgaatctgcatttgatcaaaactaatctttcaacatgaatcaaataaacactgtattaagaca 17792640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 20561019 - 20561085
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    ||||||||||| | |  ||| |||||| |||||||||||| |||||||||||||||  |||||||||    
T  20561019 attgatcggatctactcttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 20561085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 71 - 156
Target Start/End: Original strand, 38535204 - 38535289
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  |||||| ||| | | |||||| ||||| || || ||||||    
T  38535204 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaggacgggaaataaaaaacacaccgcacaaagacg 38535289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 8e-20; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 6 - 144
Target Start/End: Complemental strand, 3233081 - 3232937
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||  ||| |||||| |||| ||| ||||||| ||||      ||||||| |||| ||  |||||| ||||||||||||     
T  3233081 taatatgactatattcatgtctccggatctgcaacgttgacgacaccaaagtcattgtcattgatcggatctgcactttctcaaagctaatctttcaacc 3232982  T
Q  100 tgaatcaaataaacattgcactaagacagtatataaaagacacat 144  Q
    |||||||||||||||| |||||||||| | | |||||| ||||||    
T  3232981 tgaatcaaataaacatcgcactaagacggaaaataaaaaacacat 3232937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 6 - 128
Target Start/End: Original strand, 4882187 - 4882315
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttatt------gatcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||| ||||||||||||||  ||| |||||| |||| || |||||||| |||      |||||||| |||| ||| |||||| |||||||||||||    
T  4882187 taatatgattatattcatgtctccggatctgcaacgttgacgatgccaaagtcattatcattgatcggatctgcacttgctcaaagctaatctttcaact 4882286  T
Q  100 tgaatcaaataaacattgcactaagacag 128  Q
    |||||||||||||||  ||||||||||||    
T  4882287 tgaatcaaataaacaccgcactaagacag 4882315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 50 - 125
Target Start/End: Original strand, 9298294 - 9298369
Alignment:
Q  50 gccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    |||||||| ||||||||||| |||| ||| ||||||||||||||||||| |||||||||||||||  |||||||||    
T  9298294 gccaaagtcattgatcggatctgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaaga 9298369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 13152711 - 13152636
Alignment:
Q  22 atgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaa 97  Q
    |||||||||||| || ||| |||||||||||||||| ||||||||||| |||| ||| ||||||||||||||||||    
T  13152711 atgtctcttgatctgtaacgttgatgacgccaaagtcattgatcggatctgcacttgctcaaagttaatctttcaa 13152636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 33486917 - 33486984
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||  ||||||||||    
T  33486917 attgatcggatttgcatttgctcaaagttaatttttcaacctgaatcaaataaacaccgcactaagac 33486984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 44517381 - 44517314
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||  ||||||||||    
T  44517381 attgatcggatttgcacttgctcaaagttaatctttcaacctgaatcaaataaacaccgcactaagac 44517314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 20 - 125
Target Start/End: Complemental strand, 12871894 - 12871789
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 119  Q
    |||||||||| ||| |||||| |||| || |||||||| |||||||| || |||| ||| |||||| |||||||||||| | |||||||||||||  |||    
T  12871894 tcatgtctctggatctgcaacgttgacgatgccaaagtcattgatcgaatctgcacttgctcaaagctaatctttcaacctaaatcaaataaacaacgca 12871795  T
Q  120 ctaaga 125  Q
    ||||||    
T  12871794 ctaaga 12871789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 42 - 126
Target Start/End: Complemental strand, 8737601 - 8737517
Alignment:
Q  42 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||| ||||| |||||||| |||| |||| ||  |||||| |||||||||||| ||||||||||||||| |||||||||||    
T  8737601 ttgatgacaccaaaattattgattggatctgcacttactcaaagctaatctttcaacctgaatcaaataaacactgcactaagac 8737517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 6 - 114
Target Start/End: Original strand, 7995388 - 7995502
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||||||||||||||||   || |||||| |||| ||||||||||| ||||      ||||||| |||| ||| |||||| ||||||||||||     
T  7995388 taatatgactatattcatgtctcagaatctgcaacgttgacgacgccaaagtcattgtcattgatcggatatgcacttgctcaaagctaatctttcaacc 7995487  T
Q  100 tgaatcaaataaaca 114  Q
    |||||||||||||||    
T  7995488 tgaatcaaataaaca 7995502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 14265518 - 14265451
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||| ||||||||||    
T  14265518 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaacatcgcactaagac 14265451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 31427015 - 31427098
Alignment:
Q  37 caacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcac 120  Q
    |||| |||| ||||| |||||||||||| | | ||||| ||| ||||||||||||||||||| ||||||||||||||| |||||    
T  31427015 caacgttgacgacgcaaaagttattgattgaagttgcacttgatcaaagttaatctttcaacctgaatcaaataaacactgcac 31427098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 32878981 - 32878887
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||  ||| | |||| |||| ||| ||||||| ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||    
T  32878981 tcatgtctccggatctacaacgttgacgacaccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaaca 32878887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 19 - 124
Target Start/End: Complemental strand, 3101941 - 3101836
Alignment:
Q  19 ttcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgc 118  Q
    |||||||||||  || |||||  |||| ||||||||||| ||| || | || |||| ||| ||||||||||| |||||||| ||||||||||||||| ||    
T  3101941 ttcatgtctctgaatctgcaatgttgacgacgccaaagtcattaattgaatatgcacttgctcaaagttaatatttcaactcgaatcaaataaacatcgc 3101842  T
Q  119 actaag 124  Q
    ||||||    
T  3101841 actaag 3101836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 49 - 126
Target Start/End: Complemental strand, 13999210 - 13999133
Alignment:
Q  49 cgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||| |||||| | || |||||||| |||||||||||||| |||| |||||||||||||||| | ||||||||    
T  13999210 cgccaaagtcattgattgaatctgcatttgctcaaagttaatcttacaacctgaatcaaataaacatcgtactaagac 13999133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 25032958 - 25033030
Alignment:
Q  42 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||||||||| |||||| | ||||||| ||| |||||||||||||  |||| |||||||||||||||    
T  25032958 ttgatgacgccaaagtcattgattgaatttgcacttgctcaaagttaatctcacaacctgaatcaaataaaca 25033030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 15391139 - 15391206
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  15391139 attgatcggatatgcacttgctcaaagataatctttcaacctgaatcaaataaacaccgcactaagac 15391206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 35 - 126
Target Start/End: Complemental strand, 42491151 - 42491060
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| || ||||||| ||| |||| ||| |||||| |||||||||||  |||||||||||||||  ||||||||||    
T  42491151 tgcaacattgacgacgtcaacgtcattgatctgatctgcacttgctcaaagctaatctttcaatctgaatcaaataaacaccgcactaagac 42491060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 27534934 - 27534864
Alignment:
Q  56 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||||| ||| |||  |||||||||| |||||||||||| ||||||||||||||||  |||||||||    
T  27534934 gttattgatcagatctgctcttgttcaaagctaatctttcaacctgaatcaaataaacatcacactaagac 27534864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 56 - 126
Target Start/End: Complemental strand, 32784316 - 32784246
Alignment:
Q  56 gttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| ||||||| ||| |||||| |||||||||| | |||||||||||||||  ||||||||||    
T  32784316 gttattgatcgaatttgcacttgctcaaagctaatctttcagcctgaatcaaataaacaccgcactaagac 32784246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 67 - 124
Target Start/End: Original strand, 15791170 - 15791227
Alignment:
Q  67 gatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaag 124  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||||  ||||||||    
T  15791170 gatttgcatttcttcaaagctaatctttcaacctgaatcaaataaacaccgcactaag 15791227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 20 - 126
Target Start/End: Complemental strand, 45750757 - 45750645
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattg------atcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    |||||||||  ||| |||||| |||||||||||||||| ||||      ||||||| |||| ||| | |||| |||||||||||| ||||||||||||||    
T  45750757 tcatgtctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctgcacttgctaaaagctaatctttcaacctgaatcaaataaac 45750658  T
Q  114 attgcactaagac 126  Q
    |  ||||||||||    
T  45750657 accgcactaagac 45750645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 13488423 - 13488490
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||  |||||||||| |||||||||||| ||||| |||||||||  ||||||||||    
T  13488423 attgatcggatctgctcttgttcaaagctaatctttcaacctgaattaaataaacaccgcactaagac 13488490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 126
Target Start/End: Complemental strand, 29205578 - 29205452
Alignment:
Q  6 taatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaa------gttattgatcggatttgcatttgttcaaagttaatctttcaact 99  Q
    |||||||||| || |||||||||  ||| |||||| ||||||||||||||      || ||||||||||| | || ||| |||||| | ||| ||||||     
T  29205578 taatatgactgtaatcatgtctccggatctgcaacgttgatgacgccaaagtcattgtcattgatcggatctacacttgctcaaagctgatcattcaacc 29205479  T
Q  100 tgaatcaaataaacattgcactaagac 126  Q
    |||||||||||||||  ||||||||||    
T  29205478 tgaatcaaataaacaccgcactaagac 29205452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 126
Target Start/End: Original strand, 37822233 - 37822299
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||| ||| ||||||| ||||||||||| ||||||||||||| | |||||||||||    
T  37822233 attgatcggatctgcacttgctcaaagt-aatctttcaacctgaatcaaataaatactgcactaagac 37822299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 51418218 - 51418163
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||||||||| ||| |||||| ||||||||| || |||||||||||||||    
T  51418218 attgatcggatttgcacttgctcaaagctaatctttccacctgaatcaaataaaca 51418163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 125
Target Start/End: Complemental strand, 42276589 - 42276523
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    ||||||||||| |||| ||| | |||| |||||||||||| |||||||||||||||  |||||||||    
T  42276589 attgatcggatctgcacttgcttaaagctaatctttcaacctgaatcaaataaacaccgcactaaga 42276523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 125
Target Start/End: Original strand, 40862667 - 40862772
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 119  Q
    |||||||||| ||| |||||| |||| ||||||||| | |||||| | |||| ||  || |||||  |||||||||||  |||||||||||||||| ||     
T  40862667 tcatgtctctggatctgcaacgttgacgacgccaaaatcattgattgcatttacacctgatcaaaactaatctttcaatctgaatcaaataaacatcgct 40862766  T
Q  120 ctaaga 125  Q
    ||||||    
T  40862767 ctaaga 40862772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 80 - 156
Target Start/End: Complemental strand, 10782714 - 10782638
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||||||||||||||||||   ||||||||||||||| ||||||||||  | |||||| ||||| || || ||||||    
T  10782714 tcaaagttaatctttcaaccaaaatcaaataaacattacactaagacaagaaataaaaaacacaccgcacaaagacg 10782638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 143
Target Start/End: Complemental strand, 47551353 - 47551245
Alignment:
Q  35 tgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatata 134  Q
    |||||| |||| |||| |||||| |||||| |||| |||| ||| |||||| |||||||||||| | |||||| ||||||  ||||| |||| | | |||    
T  47551353 tgcaacgttgacgacgtcaaagtcattgattggatctgcacttgctcaaagctaatctttcaacctaaatcaattaaacacagcactgagacgggaaata 47551254  T
Q  135 aaagacaca 143  Q
    ||| |||||    
T  47551253 aaaaacaca 47551245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 146
Target Start/End: Original strand, 424178 - 424265
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcg 146  Q
    |||||||| || |||| |||| |||||||||||||||||| |  ||||||||||||  | |||||||| | | |||||| ||||||||    
T  424178 attgatcgaatctgcacttgtgcaaagttaatctttcaacctagatcaaataaacaccgtactaagacggaaaataaaaaacacatcg 424265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 17347831 - 17347764
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||||| || |||| ||  |||||| |||||||||||| | ||||||||||||| |||||||||||    
T  17347831 attgatcgaatctgcacttactcaaagctaatctttcaaccttaatcaaataaacactgcactaagac 17347764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 126
Target Start/End: Complemental strand, 18343846 - 18343780
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| |||  |||||||||| |||||||||||| |||||| ||||||||  ||||||||||    
T  18343846 attgatcggatctgctcttgttcaaagctaatctttcaacctgaatc-aataaacaccgcactaagac 18343780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 24114594 - 24114665
Alignment:
Q  87 taatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacgag 158  Q
    ||||||||||||||||||||||||||||| ||| ||||| | || || ||| ||||| || || ||||||||    
T  24114594 taatctttcaacttgaatcaaataaacatcgcattaagatattaaattaaaaacacaccgcacaaagacgag 24114665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 114
Target Start/End: Original strand, 28678017 - 28678072
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| ||| |||||| |||| ||||||| |||||||||||||||    
T  28678017 attgatcggatctgcacttgctcaaagctaatttttcaacctgaatcaaataaaca 28678072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 59 - 125
Target Start/End: Original strand, 4870920 - 4870986
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    ||||||||||| |||| ||| |||||| |||| ||||||  |||||||||||||||  |||||||||    
T  4870920 attgatcggatctgcacttgctcaaagctaatttttcaatctgaatcaaataaacaccgcactaaga 4870986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 8925474 - 8925345
Alignment:
Q  7 aatatgactatattcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatca 106  Q
    |||||||||||||||| || ||  ||| | |||  |||| || ||||||||||||||| | ||||||  ||| |||||  |||||||| || ||||||||    
T  8925474 aatatgactatattcaagtgtccggatatccaatgttgacgatgccaaagttattgattgaatttgcccttgctcaaa-ctaatcttttaatttgaatca 8925376  T
Q  107 aataaacattgcactaagacagtatataaaa 137  Q
    || |||||| ||| |||||||| | ||||||    
T  8925375 aaaaaacatcgcattaagacaggaaataaaa 8925345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 80 - 126
Target Start/End: Complemental strand, 20411785 - 20411739
Alignment:
Q  80 tcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    |||||| |||||||||||| |||||||||||||||  ||||||||||    
T  20411785 tcaaagctaatctttcaacctgaatcaaataaacaccgcactaagac 20411739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 143
Target Start/End: Original strand, 28399210 - 28399300
Alignment:
Q  53 aaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacaca 143  Q
    ||||| |||||| |||| |||| ||| |||||| |||| ||||||| ||||||||||||| |  ||| |||||||| | |||||| |||||    
T  28399210 aaagtcattgattggatctgcacttgctcaaagctaatatttcaacatgaatcaaataaataccgcattaagacaggaaataaaaaacaca 28399300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 29938510 - 29938417
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||||||||  ||| |||||| ||||| |||||||||| |||||| |||| |||| ||| |||| | || ||||||||| | |||||||||||||    
T  29938510 tcatgtctccggatttgcaacgttgataacgccaaagtcattgattggatctgcacttgatcaa-gctattctttcaacataaatcaaataaaca 29938417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 10627233 - 10627137
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| |||| ||| |||||| ||||||| |||| |||||||||||||||  |||||| ||| | | |||||| ||||| || || ||||||    
T  10627233 attgatcggatctgcacttgctcaaagctaatctt-caacctgaatcaaataaacaccgcactatgacggaaaataaaaaacacaccgcacaaagacg 10627137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 47 - 112
Target Start/End: Complemental strand, 46930341 - 46930276
Alignment:
Q  47 gacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaa 112  Q
    |||| |||||||||| || | ||||| | |||||| |||||||||||||||| | |||||||||||    
T  46930341 gacgtcaaagttattaattgaatttgtacttgttcgaagttaatctttcaacataaatcaaataaa 46930276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 114
Target Start/End: Original strand, 29069711 - 29069783
Alignment:
Q  42 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||| |||| |||||| |||||| | || |||| ||| ||||| ||||||||||||  |||||||||||||||    
T  29069711 ttgaagacgtcaaagtcattgattgaatatgcacttgatcaaaattaatctttcaatctgaatcaaataaaca 29069783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0999 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0999
Description:

Target: scaffold0999; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 22 - 97
Target Start/End: Complemental strand, 1975 - 1900
Alignment:
Q  22 atgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaa 97  Q
    |||||||| ||| |||||| |||||||||||||||| ||||||||||| |||| ||| |||||| |||||||||||    
T  1975 atgtctctcgatctgcaacgttgatgacgccaaagtcattgatcggatctgcacttgctcaaagctaatctttcaa 1900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 59 - 156
Target Start/End: Original strand, 13132 - 13229
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    |||||||||||||||| ||| |||||| |||||||||||| |||||||||||||||   ||||||||| | | |||||| ||||| || || ||||||    
T  13132 attgatcggatttgcacttgctcaaagctaatctttcaacctgaatcaaataaacacctcactaagacgggaaataaaaaacacaccgcacaaagacg 13229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0542 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0542
Description:

Target: scaffold0542; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 4033 - 3961
Alignment:
Q  42 ttgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    |||| |||||||||||||||||| |||| |||| ||| |||||| |||||||| || ||||||||||||||||    
T  4033 ttgacgacgccaaagttattgattggatctgcacttgatcaaagataatcttttaatttgaatcaaataaaca 3961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 2)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 20 - 123
Target Start/End: Original strand, 931 - 1034
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 119  Q
    |||||||||  ||| |||||| |||||||| ||||||| |||||||| || |||| ||  |||||| |||||||||||| ||||||||||| |||  |||    
T  931 tcatgtctccggatctgcaacgttgatgacaccaaagtcattgatcgaatctgcagtttctcaaagctaatctttcaacctgaatcaaatatacaccgca 1030  T
Q  120 ctaa 123  Q
    ||||    
T  1031 ctaa 1034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 71 - 125
Target Start/End: Complemental strand, 197 - 143
Alignment:
Q  71 tgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaaga 125  Q
    |||| ||| |||||| |||||||||||| |||||||||||||||  |||||||||    
T  197 tgcacttgctcaaagctaatctttcaacctgaatcaaataaacacagcactaaga 143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 59 - 114
Target Start/End: Complemental strand, 3134 - 3079
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaaca 114  Q
    ||||||||||| |||| |||||||||| |||||||||||| |||||||||||||||    
T  3134 attgatcggatctgcacttgttcaaagctaatctttcaacctgaatcaaataaaca 3079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1350 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold1350
Description:

Target: scaffold1350; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 59 - 156
Target Start/End: Complemental strand, 1808 - 1711
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcgtacgaagacg 156  Q
    ||||||||||| || | ||| |||||| |||||||||||| |||||||||||||||  |||||||||| | | |||||| ||||| || || ||||||    
T  1808 attgatcggatctgtacttgctcaaagctaatctttcaacctgaatcaaataaacaccgcactaagacgggaaataaaaaacacaccgcactaagacg 1711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 20 - 126
Target Start/End: Original strand, 6972 - 7078
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgca 119  Q
    |||||||||  ||| |||||| || | ||||||||||| ||||||||||| |||| ||| || ||| |||||||| |||  |||| ||||||||| ||||    
T  6972 tcatgtctccggatctgcaacgttaacgacgccaaagtcattgatcggatctgcacttgctccaagctaatcttttaacccgaattaaataaacactgca 7071  T
Q  120 ctaagac 126  Q
    || ||||    
T  7072 cttagac 7078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 59 - 113
Target Start/End: Complemental strand, 74398 - 74344
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaac 113  Q
    ||||||||||| |||| ||| |||||| |||||||||||| ||||||||||||||    
T  74398 attgatcggatctgcacttgctcaaagctaatctttcaacctgaatcaaataaac 74344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0312 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0312
Description:

Target: scaffold0312; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 146
Target Start/End: Complemental strand, 6371 - 6284
Alignment:
Q  59 attgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagacagtatataaaagacacatcg 146  Q
    |||||||| || |||| |||| |||||||||||||||||| |  ||||||||||||  | |||||||| | | |||||| ||||||||    
T  6371 attgatcgaatctgcacttgtgcaaagttaatctttcaacctagatcaaataaacaccgtactaagacggaaaataaaaaacacatcg 6284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 48 - 115
Target Start/End: Original strand, 201927 - 201994
Alignment:
Q  48 acgccaaagttattgatcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacat 115  Q
    |||||||| | |||||| | |||| || |||||||||| |||| ||||||| ||||||||||||||||    
T  201927 acgccaaaatcattgattgaattttcacttgttcaaagctaatatttcaacctgaatcaaataaacat 201994  T

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Target: scaffold0432 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 20 - 74
Target Start/End: Original strand, 2284 - 2338
Alignment:
Q  20 tcatgtctcttgatgtgcaacattgatgacgccaaagttattgatcggatttgca 74  Q
    |||||||||  ||| ||||||||||| ||||||||||| ||||||||||| ||||    
T  2284 tcatgtctccggatctgcaacattgacgacgccaaagtcattgatcggatctgca 2338  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 126
Target Start/End: Complemental strand, 35313 - 35251
Alignment:
Q  64 tcggatttgcatttgttcaaagttaatctttcaacttgaatcaaataaacattgcactaagac 126  Q
    ||||||||||| ||| |||||| |||| ||||||| | |||||||||||||  ||||||||||    
T  35313 tcggatttgcacttgctcaaagctaatatttcaacctaaatcaaataaacaccgcactaagac 35251  T

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