View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF6745_high_1 (Length: 992)

Name: NF6745_high_1
Description: NF6745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF6745_high_1
NF6745_high_1
[»] chr8 (37 HSPs)
chr8 (14-938)||(45547789-45548718)
chr8 (608-831)||(45540318-45540534)
chr8 (608-688)||(45540695-45540776)
chr8 (485-632)||(32924167-32924313)
chr8 (511-657)||(32975698-32975845)
chr8 (733-830)||(24504057-24504154)
chr8 (733-813)||(13089766-13089850)
chr8 (511-657)||(34286492-34286638)
chr8 (733-829)||(8444263-8444356)
chr8 (522-657)||(38895681-38895817)
chr8 (511-657)||(24350447-24350594)
chr8 (733-820)||(24581449-24581536)
chr8 (487-660)||(14942411-14942585)
chr8 (554-651)||(25465781-25465878)
chr8 (485-657)||(32131425-32131598)
chr8 (511-657)||(41145324-41145473)
chr8 (733-820)||(10230104-10230191)
chr8 (522-633)||(14724918-14725029)
chr8 (488-657)||(16972284-16972455)
chr8 (577-632)||(25333655-25333710)
chr8 (511-654)||(28879069-28879210)
chr8 (544-660)||(2563402-2563519)
chr8 (585-649)||(24087256-24087321)
chr8 (733-797)||(4034301-4034365)
chr8 (534-657)||(10298855-10298978)
chr8 (485-564)||(26046978-26047057)
chr8 (554-660)||(30974043-30974150)
chr8 (511-660)||(2669659-2669809)
chr8 (577-654)||(9131059-9131137)
chr8 (600-657)||(10213795-10213853)
chr8 (485-531)||(11988308-11988354)
chr8 (733-806)||(25582581-25582654)
chr8 (486-531)||(29713289-29713334)
chr8 (577-657)||(35055499-35055579)
chr8 (544-633)||(36907597-36907686)
chr8 (577-657)||(37410841-37410922)
chr8 (577-657)||(42102183-42102264)
[»] chr2 (32 HSPs)
chr2 (485-660)||(21788442-21788618)
chr2 (733-831)||(2702258-2702356)
chr2 (733-830)||(12410790-12410887)
chr2 (733-830)||(12422850-12422947)
chr2 (733-815)||(27271658-27271740)
chr2 (733-830)||(6764423-6764520)
chr2 (733-830)||(37647968-37648065)
chr2 (733-822)||(11031809-11031898)
chr2 (740-820)||(34394492-34394572)
chr2 (553-654)||(8832510-8832612)
chr2 (502-657)||(4004821-4004977)
chr2 (485-654)||(4026911-4027080)
chr2 (480-574)||(34913402-34913496)
chr2 (489-657)||(15155802-15155971)
chr2 (485-657)||(33321240-33321413)
chr2 (532-633)||(42064883-42064984)
chr2 (523-657)||(36501443-36501578)
chr2 (577-654)||(38216096-38216174)
chr2 (513-660)||(11776997-11777145)
chr2 (511-657)||(25836641-25836787)
chr2 (733-810)||(7900954-7901031)
chr2 (488-633)||(29774733-29774878)
chr2 (485-657)||(37409628-37409801)
chr2 (480-528)||(21788572-21788620)
chr2 (567-635)||(35731203-35731271)
chr2 (487-658)||(38471718-38471890)
chr2 (485-564)||(755764-755843)
chr2 (555-657)||(30382197-30382300)
chr2 (567-633)||(7480852-7480918)
chr2 (567-660)||(12950040-12950134)
chr2 (584-657)||(22898285-22898359)
chr2 (576-633)||(23956217-23956274)
[»] chr7 (34 HSPs)
chr7 (480-660)||(44613398-44613579)
chr7 (733-830)||(28782015-28782112)
chr7 (733-831)||(1032222-1032320)
chr7 (733-830)||(9948933-9949030)
chr7 (733-817)||(11621380-11621464)
chr7 (733-830)||(9942602-9942699)
chr7 (733-813)||(40871302-40871382)
chr7 (485-629)||(48021605-48021748)
chr7 (532-657)||(39279461-39279588)
chr7 (480-633)||(28759790-28759946)
chr7 (485-657)||(29390479-29390651)
chr7 (487-657)||(22032749-22032920)
chr7 (511-657)||(29378656-29378803)
chr7 (540-660)||(47654339-47654460)
chr7 (522-660)||(37465811-37465951)
chr7 (511-633)||(47648549-47648670)
chr7 (485-657)||(38372543-38372716)
chr7 (521-633)||(14691252-14691364)
chr7 (487-654)||(22575573-22575741)
chr7 (600-654)||(33204934-33204989)
chr7 (735-813)||(12622906-12622984)
chr7 (577-657)||(16932858-16932939)
chr7 (577-657)||(16938241-16938322)
chr7 (577-657)||(16958892-16958973)
chr7 (577-657)||(33288003-33288084)
chr7 (740-820)||(17193893-17193972)
chr7 (740-810)||(15669718-15669787)
chr7 (495-657)||(34922926-34923091)
chr7 (511-660)||(35809101-35809251)
chr7 (524-633)||(8180544-8180653)
chr7 (733-810)||(18299447-18299523)
chr7 (733-810)||(29626953-29627029)
chr7 (496-658)||(43391717-43391880)
chr7 (600-660)||(43818803-43818864)
[»] chr4 (43 HSPs)
chr4 (480-660)||(41228883-41229064)
chr4 (733-830)||(43499300-43499397)
chr4 (733-831)||(39059723-39059821)
chr4 (736-813)||(37870649-37870726)
chr4 (734-829)||(36651742-36651837)
chr4 (480-654)||(46704201-46704375)
chr4 (733-831)||(9896508-9896606)
chr4 (521-657)||(18630823-18630960)
chr4 (485-652)||(29877624-29877792)
chr4 (485-657)||(23297423-23297593)
chr4 (511-657)||(48591352-48591499)
chr4 (736-830)||(7743575-7743669)
chr4 (513-633)||(36298344-36298465)
chr4 (485-632)||(18424232-18424378)
chr4 (736-830)||(42718574-42718669)
chr4 (480-574)||(212960-213053)
chr4 (733-822)||(23106753-23106842)
chr4 (511-657)||(2547975-2548122)
chr4 (523-657)||(17222852-17222987)
chr4 (511-633)||(896981-897103)
chr4 (488-654)||(42611799-42611966)
chr4 (485-594)||(7206578-7206687)
chr4 (480-656)||(8057017-8057194)
chr4 (511-654)||(36740915-36741059)
chr4 (485-632)||(38345776-38345922)
chr4 (511-633)||(7148783-7148905)
chr4 (488-657)||(12495572-12495744)
chr4 (480-657)||(11298573-11298740)
chr4 (733-805)||(48640764-48640836)
chr4 (740-820)||(54898895-54898975)
chr4 (511-606)||(43983362-43983457)
chr4 (577-635)||(48721897-48721955)
chr4 (488-564)||(948060-948136)
chr4 (485-564)||(3564205-3564284)
chr4 (584-654)||(8130563-8130634)
chr4 (485-564)||(43699505-43699584)
chr4 (480-531)||(46175902-46175953)
chr4 (584-657)||(14987528-14987602)
chr4 (598-654)||(30956782-30956839)
chr4 (557-657)||(31022457-31022558)
chr4 (554-654)||(35405738-35405838)
chr4 (585-657)||(42617158-42617231)
chr4 (577-657)||(47202902-47202983)
[»] chr1 (46 HSPs)
chr1 (480-660)||(9572709-9572891)
chr1 (733-822)||(19227887-19227976)
chr1 (733-830)||(33766359-33766456)
chr1 (733-830)||(51534478-51534575)
chr1 (733-821)||(4532087-4532175)
chr1 (480-660)||(46689475-46689656)
chr1 (733-813)||(34549383-34549463)
chr1 (733-813)||(45432374-45432454)
chr1 (485-633)||(46473079-46473227)
chr1 (485-657)||(13038932-13039105)
chr1 (740-816)||(33936450-33936526)
chr1 (511-657)||(26988159-26988306)
chr1 (511-657)||(28122627-28122776)
chr1 (488-633)||(4068103-4068248)
chr1 (733-830)||(13182647-13182744)
chr1 (511-660)||(36422906-36423056)
chr1 (512-656)||(15515276-15515421)
chr1 (533-657)||(37712100-37712225)
chr1 (494-633)||(35282547-35282686)
chr1 (511-657)||(37329340-37329487)
chr1 (487-633)||(51162256-51162402)
chr1 (487-635)||(12256594-12256741)
chr1 (485-632)||(26946058-26946206)
chr1 (511-654)||(48819310-48819454)
chr1 (488-654)||(10365159-10365325)
chr1 (511-657)||(16888897-16889040)
chr1 (487-594)||(49971238-49971345)
chr1 (511-633)||(6337709-6337831)
chr1 (584-652)||(10849999-10850068)
chr1 (523-633)||(12828145-12828257)
chr1 (480-633)||(25485728-25485881)
chr1 (553-633)||(36259244-36259324)
chr1 (615-657)||(1565303-1565345)
chr1 (491-657)||(35897547-35897718)
chr1 (577-657)||(15791460-15791541)
chr1 (497-633)||(26542970-26543106)
chr1 (511-631)||(3069809-3069929)
chr1 (577-660)||(19395851-19395935)
chr1 (577-633)||(50919564-50919620)
chr1 (733-808)||(26676905-26676980)
chr1 (739-806)||(31911555-31911622)
chr1 (523-657)||(41196638-41196773)
chr1 (584-657)||(5347238-5347312)
chr1 (600-634)||(10082351-10082385)
chr1 (577-657)||(3115990-3116071)
chr1 (733-810)||(28756478-28756555)
[»] chr3 (30 HSPs)
chr3 (492-660)||(32901073-32901242)
chr3 (511-657)||(43971775-43971922)
chr3 (480-657)||(3876191-3876369)
chr3 (485-660)||(33946475-33946643)
chr3 (485-653)||(34707645-34707814)
chr3 (511-655)||(43079864-43080009)
chr3 (485-657)||(51409378-51409550)
chr3 (511-657)||(40240505-40240652)
chr3 (485-657)||(22809121-22809295)
chr3 (485-649)||(40581012-40581178)
chr3 (488-628)||(53217998-53218138)
chr3 (576-660)||(36266307-36266392)
chr3 (511-657)||(585031-585177)
chr3 (584-660)||(38524172-38524249)
chr3 (740-805)||(50642392-50642457)
chr3 (485-596)||(29270346-29270457)
chr3 (577-658)||(25341347-25341429)
chr3 (511-633)||(42956132-42956254)
chr3 (511-633)||(45331248-45331370)
chr3 (596-660)||(4974407-4974472)
chr3 (487-564)||(10448761-10448838)
chr3 (577-657)||(17752059-17752140)
chr3 (577-657)||(19053379-19053460)
chr3 (553-657)||(20174868-20174973)
chr3 (584-660)||(43376779-43376856)
chr3 (740-810)||(20406403-20406473)
chr3 (587-633)||(27769736-27769782)
chr3 (553-657)||(48597794-48597900)
chr3 (733-794)||(15030106-15030167)
chr3 (540-633)||(53787705-53787798)
[»] chr5 (36 HSPs)
chr5 (733-826)||(19021396-19021489)
chr5 (733-829)||(22639563-22639659)
chr5 (733-830)||(39143220-39143317)
chr5 (511-649)||(13625456-13625596)
chr5 (489-629)||(42852011-42852150)
chr5 (511-657)||(40152804-40152951)
chr5 (733-830)||(6537080-6537176)
chr5 (485-633)||(7364262-7364410)
chr5 (511-654)||(28625491-28625635)
chr5 (511-654)||(24030226-24030369)
chr5 (491-633)||(13060555-13060697)
chr5 (540-657)||(35536885-35537002)
chr5 (485-657)||(29922117-29922290)
chr5 (577-657)||(40697083-40697164)
chr5 (512-655)||(11912032-11912176)
chr5 (740-799)||(926759-926818)
chr5 (487-629)||(43318990-43319132)
chr5 (485-632)||(2878631-2878777)
chr5 (502-633)||(17657244-17657375)
chr5 (512-594)||(1868858-1868940)
chr5 (485-563)||(22201959-22202037)
chr5 (576-637)||(11163231-11163292)
chr5 (485-570)||(17128263-17128348)
chr5 (540-633)||(28357181-28357274)
chr5 (485-660)||(1371921-1372094)
chr5 (484-564)||(10537241-10537321)
chr5 (532-632)||(41419533-41419633)
chr5 (603-657)||(6125389-6125444)
chr5 (511-657)||(6144749-6144896)
chr5 (489-564)||(11991294-11991369)
chr5 (740-807)||(22580397-22580464)
chr5 (553-631)||(38498623-38498699)
chr5 (532-657)||(40452405-40452532)
chr5 (515-657)||(41059717-41059860)
chr5 (523-629)||(23087736-23087842)
chr5 (733-806)||(26368935-26369008)
[»] chr6 (28 HSPs)
chr6 (480-654)||(6758607-6758783)
chr6 (485-660)||(23239232-23239408)
chr6 (733-813)||(12912248-12912328)
chr6 (734-822)||(24393921-24394009)
chr6 (483-657)||(29623406-29623580)
chr6 (502-656)||(32675818-32675973)
chr6 (480-659)||(2040107-2040292)
chr6 (485-653)||(21891270-21891439)
chr6 (734-813)||(165531-165610)
chr6 (485-620)||(3829885-3830020)
chr6 (740-822)||(18972621-18972703)
chr6 (511-655)||(2034159-2034304)
chr6 (485-633)||(10873971-10874117)
chr6 (484-632)||(2255718-2255866)
chr6 (553-660)||(10184255-10184363)
chr6 (733-806)||(6029356-6029429)
chr6 (603-659)||(6752915-6752972)
chr6 (511-654)||(2027107-2027251)
chr6 (532-635)||(7576812-7576915)
chr6 (584-657)||(10755211-10755285)
chr6 (577-657)||(9764319-9764400)
chr6 (511-564)||(24625862-24625915)
chr6 (584-651)||(10730142-10730210)
chr6 (487-574)||(6632646-6632733)
chr6 (615-657)||(23239232-23239275)
chr6 (600-654)||(35071359-35071414)
chr6 (733-810)||(7734077-7734153)
chr6 (485-633)||(10687292-10687443)
[»] scaffold0300 (1 HSPs)
scaffold0300 (733-829)||(9581-9677)
[»] scaffold0041 (1 HSPs)
scaffold0041 (733-813)||(94900-94980)
[»] scaffold0037 (1 HSPs)
scaffold0037 (733-813)||(997-1077)
[»] scaffold1367 (1 HSPs)
scaffold1367 (480-654)||(1038-1213)
[»] scaffold0074 (1 HSPs)
scaffold0074 (733-818)||(23809-23894)
[»] scaffold0157 (1 HSPs)
scaffold0157 (488-657)||(24733-24905)
[»] scaffold0057 (1 HSPs)
scaffold0057 (485-657)||(24317-24489)


Alignment Details
Target: chr8 (Bit Score: 814; Significance: 0; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 814; E-Value: 0
Query Start/End: Original strand, 14 - 938
Target Start/End: Complemental strand, 45548718 - 45547789
Alignment:
Q  14 tcgaagaatatgatgttataagggatacagaaaagcatatccttagtatacttctggatgagatcgccaaagaatattgcacattcaaggagcgctgatt 113  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548718 tcgaaaaatatgatgttataagggatacagaaaagcatatccttagtatacttctggatgagatcgccaaagaatattgcacattcaaggagcgctgatt 45548619  T
Q  114 gaatatgacaaccatactatggaagttttttatgt-atttgcaatacaattttgttggttgtaagtttgtaactggtgaggagttctgaacagcaagttt 212  Q
    ||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548618 gaatatgacaaccatactatgaaagttttttatgttatttgcaatacaattttgttggttgtaagtttgtaactggtgaggagttctgaacagcaagttt 45548519  T
Q  213 tcattagaaagaagagtttcctcctttattaagttactataaaactttaacatggagtaaaatcttttaaattgagtacatttcttataaaatgatttat 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548518 tcattagaaagaagagtttcctcctttattaagttactataaaactttaacatggagtaaaatcttttaaattgagtacatttcttataaaatgatttat 45548419  T
Q  313 cgacattactttctcatatttgagttatccaaagacaatttcaaatagacaaaactacgcccgcaggtggcgttacatgcacctcccagtcccagacttg 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  45548418 cgacattactttctcatatttgagttatccaaagacaatttcaaatagacaaaactacgcccgcaggtggcgttacatgcatctcccagtcccagacttg 45548319  T
Q  413 aagtcggatctcaaagccatccatgaaagaaatagcgtgtaaataccagagaaagccttttggccgattggattgagcttatgcaaaataactaatgaaa 512  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45548318 aagtcggatctcaaagccatccatgaaagaaatagcgtggaaataccggagaaagccttttggccgattggattgagcttatgcaaaataactaatgaaa 45548219  T
Q  513 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtta 612  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||||||    
T  45548218 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaaatacaacttaggaagataaaattttcattaataaaaacttatgagtta 45548119  T
Q  613 atataaaagcttatttatttgtaaagatatttttcataagctcaatcccaatcagggcccatgtggttgtggtaaatttaatttttttatttgtctacca 712  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  45548118 atataaaagcttatttatttgtaaagatatttttcataagctcaatcccaatcagggcccatgtggttgtggtaaatttaatttttttatttttctacca 45548019  T
Q  713 aaaatagtttgnnnnnnnnnaagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtca 812  Q
    ||||||||||          ||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  45548018 aaaatagttt--ttttttttaagaaactaaaatggattaaattactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtca 45547921  T
Q  813 attacaagaatgccaaaacaggaataaaaaagaaagctacc------cgtaaatattcccaagcatggtaaagggatattatcggagatttagttgaaca 906  Q
    |||||||||||||||||||||||| ||||||||||||||||      |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  45547920 attacaagaatgccaaaacaggaacaaaaaagaaagctaccctgttacgtaaatattcccaagcaaggtaaagggatattatcggagatttagttgaaca 45547821  T
Q  907 aaatataacatcagatttcccatggccaaaac 938  Q
    ||||||||||||||||||||||||||||||||    
T  45547820 aaatataacatcagatttcccatggccaaaac 45547789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 115; E-Value: 7e-58
Query Start/End: Original strand, 608 - 831
Target Start/End: Complemental strand, 45540534 - 45540318
Alignment:
Q  608 agttaatataaaagcttatttatttgtaaagatatttttcataagctcaatcccaatcagggcccatgtggttgtggtaaatttaatttttttatttgtc 707  Q
    |||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  45540534 agttaatataaaagtttatttatttgtaaaaatatttttcataagttcaatcccaatcagggcctatgtggttgtggtaaatttaatttttttatttttc 45540435  T
Q  708 taccaaaaatagtttgnnnnnnnnnaagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaag 807  Q
    ||   ||||||||||          |||||||||||| |||||||||||||||||| |   ||||||||||||||||| ||||||||||||| || ||||    
T  45540434 tattcaaaatagttt----ttttttaagaaactaaaacggattaaattactgaaagcc---agatttcagcacaaggaatgccaaaaccccaactaaaag 45540342  T
Q  808 agtcaattacaagaatgccaaaac 831  Q
    |||||||| ||||||||| |||||    
T  45540341 agtcaattgcaagaatgctaaaac 45540318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 608 - 688
Target Start/End: Complemental strand, 45540776 - 45540695
Alignment:
Q  608 agttaatataaaagcttatttatttgtaaagatattttt-cataagctcaatcccaatcagggcccatgtggttgtggtaaa 688  Q
    ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||||||||||||    
T  45540776 agttaatataaaagcttatttatttgtaaagatattttttcataagttcaatcccaatcagggcctatgtggttgtggtaaa 45540695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 485 - 632
Target Start/End: Complemental strand, 32924313 - 32924167
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| | || |||  |||||||| |||||||||| ||||| | ||||||||| |  ||||||||||||  ||||||||  ||||||||    
T  32924313 ttgagcttatgcaaaacagcttatgcgaataaatatgcttttatttgttatttataagcttgtttatgtagtttatgaaaaaacaacttatgaagataaa 32924214  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 632  Q
    |||||| ||| | ||||||||||| |||||||||||||||||||||||    
T  32924213 attttc-ttagtgaaaacttatgaattaatataaaagcttatttattt 32924167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 511 - 657
Target Start/End: Original strand, 32975698 - 32975845
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |||||| |||  | | ||||||||| |    
T  32975698 aaataaataagcttttatatattattcataagcttgtcaaggtagtttatgaaaacacaacttatgaagatacaatttttgtttgtgagaacttatgaat 32975797  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||    
T  32975798 taatataaaagcttatttatttgcataagctatttttcataagctcaa 32975845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 24504154 - 24504057
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    |||||||||||||||||||||  ||||||||  | |||||||||||||||||| |||||||||| ||||| |||||||||||||||||  ||||||||    
T  24504154 aagaaactaaaatggattaaaaaactgaaagcatagagatttcagcacaaggaatgccaaaacctcagctaaaagagtcaattacaagtgtgccaaaa 24504057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 733 - 813
Target Start/End: Original strand, 13089766 - 13089850
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggat----tgccaaaaccccagctgaaagagtcaa 813  Q
    ||||| ||||||||||||| |||||| |||| |||||||||||||||||||||     |||||||||||||||||||||||||||    
T  13089766 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggaaggagtgccaaaaccccagctgaaagagtcaa 13089850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 34286638 - 34286492
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  |||||| |||||  ||| ||||  |||||| |||||||||||   | ||||||||| |    
T  34286638 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttgtgaaaa-acagcttatgaagatacaattttcgttagggagaacttatgaat 34286540  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||||||||||||||| | ||  ||||||||||||||||||    
T  34286539 taatataaaagcttatttatttgcataacctatttttcataagctcaa 34286492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 733 - 829
Target Start/End: Original strand, 8444263 - 8444356
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 829  Q
    ||||||||||||||||||||| || |   || || ||||||||||||||| || |||||||||||||| | |||||||||||||||||| |||||||    
T  8444263 aagaaactaaaatggattaaaataat---agcctagagatttcagcacaaagagtgccaaaaccccagttaaaagagtcaattacaagagtgccaaa 8444356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 522 - 657
Target Start/End: Original strand, 38895681 - 38895817
Alignment:
Q  522 cttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaag 621  Q
    ||||||||| ||||||| |||||||||||  ||||||||||||  | || |||  |||||| ||| || |||| | ||||||||| | |||||||||||     
T  38895681 cttttatttattattcataagcttgttaaggtagtttatgaaaaaataatttatgaagatacaatatttgttagtgaaaacttataaattaatataaaaa 38895780  T
Q  622 cttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||||||||||| ||  || |||||||||||||||    
T  38895781 cttatttatttgtataaactaattttcataagctcaa 38895817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 24350594 - 24350447
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    |||||| || |||||||| | ||||||| |||||||| ||  || |||||||||  | | ||||  |||||| ||||||||||| ||| ||||||||| |    
T  24350594 aaataattaagcttttatatattattcataagcttgtcaacgtaatttatgaaaaaatagcttatgaagatataattttcgttagtaagaacttatgaat 24350495  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  24350494 taacataaaatcttatttatttgcataagctagttttcataagctcaa 24350447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 733 - 820
Target Start/End: Original strand, 24581449 - 24581536
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 820  Q
    ||||| |||||||| |||| |||| |||||| ||| | ||||||| | ||||| || ||||||||||||||||||| |||||||||||    
T  24581449 aagaagctaaaatgaattatattattgaaagtctgaatatttcagtataaggagtgtcaaaaccccagctgaaagaatcaattacaag 24581536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 487 - 660
Target Start/End: Original strand, 14942411 - 14942585
Alignment:
Q  487 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 586  Q
    ||||||||| |||| |||| ||| | ||||||| |||||| | | ||||| | |||||||||||  ||||||||||||  || |||||  |||||  |||    
T  14942411 gagcttatgtaaaacaacttatgtatataaataagcttttgtgtattatttataagcttgttaagttagtttatgaaaaaacgacttatgaagatgcaat 14942510  T
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg-taaagatatttttcataagctcaatcc 660  Q
    ||| ||||  || ||||||| | |||| |||||| ||||||||||||  |||| |||||| ||||||||| ||||    
T  14942511 ttttgttagcaagaacttataaattaacataaaaccttatttatttgcaaaagctattttccataagctccatcc 14942585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 554 - 651
Target Start/End: Complemental strand, 25465878 - 25465781
Alignment:
Q  554 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 651  Q
    |||||||||||  ||||||||  |||||| |||||| |||| | ||||||||||| |||| ||||||||||||||||||| | ||| ||||||||||||    
T  25465878 agtttatgaaaa-acaacttatgaagatacaatttttgttactgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 25465781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 485 - 657
Target Start/End: Original strand, 32131425 - 32131598
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| | || ||| ||||||||| ||||||||   ||||||  ||| |||| ||  |||||||||||   ||||| ||  |||||| |    
T  32131425 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgcattattcctaagtttgtcaaggtagtttatgaataaacaacctatgaagataca 32131524  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||  || | | ||||||||| |||| |||||||||||| |||||| | ||  ||||||||||||||||||    
T  32131525 attttcaatagtgagaacttatgaattaacataaaagcttatctatttgcataaactatttttcataagctcaa 32131598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 41145473 - 41145324
Alignment:
Q  511 aaataaatacgcttttattttttatt---cacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatg 607  Q
    ||||||||| |||||||||| |||||   || ||| |||||||  ||||||||||||  |||||||  |||||||  |||||| ||| | | ||||||||    
T  41145473 aaataaataagcttttatttattattattcataagtttgttaaggtagtttatgaaaaaacaacttt-aaagatacgattttcattagtgagaacttatg 41145375  T
Q  608 agttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    | |||||||| || |||||||||||| | ||  ||||||||||||||||||    
T  41145374 aattaatatataaacttatttatttgcataaactatttttcataagctcaa 41145324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 733 - 820
Target Start/End: Original strand, 10230104 - 10230191
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 820  Q
    ||||||||||||| |||||||| | |||||| ||||||||||||||| ||| | || |||| |  || || |||||||||||||||||    
T  10230104 aagaaactaaaattgattaaatcaatgaaagtctggagatttcagcataagaagtgtcaaagcttcaactaaaagagtcaattacaag 10230191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 522 - 633
Target Start/End: Complemental strand, 14725029 - 14724918
Alignment:
Q  522 cttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaag 621  Q
    ||||||| | ||||| | ||| |||||||  || |||||||||  ||||||||   || || ||||||||||||||| ||||||||| |||| ||||||     
T  14725029 cttttatatattatttataagattgttaatgtaatttatgaaaaaacaacttatgtaggtataattttcgttaataagaacttatgaattaagataaaaa 14724930  T
Q  622 cttatttatttg 633  Q
    ||||||||||||    
T  14724929 cttatttatttg 14724918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 488 - 657
Target Start/End: Complemental strand, 16972455 - 16972284
Alignment:
Q  488 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgt-taaaatagtttatgaaagtacaacttagaaagataaaat 586  Q
    ||||||||||||| || |  || ||||||||| |||| ||| | ||||||| ||| |||| |||  ||||| ||||||  ||| ||||  |||||| |||    
T  16972455 agcttatgcaaaacaatttttgcaaataaataagcttgtatgtattattcataagtttgtctaaggtagttcatgaaaaaacagcttatgaagatacaat 16972356  T
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||||| | | ||||||||| | |||||||||| ||||||||||| | ||| ||||||  ||||||||||    
T  16972355 tttcgttagtgataacttatgaatcaatataaaagtttatttatttgcataagctattttgaataagctcaa 16972284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 577 - 632
Target Start/End: Complemental strand, 25333710 - 25333655
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttattt 632  Q
    |||||| ||||||||||| | ||||||||||| |||| ||||||||||||||||||    
T  25333710 aagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttattt 25333655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 511 - 654
Target Start/End: Original strand, 28879069 - 28879210
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaa--acttatga 608  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||     ||| |||| | |||  ||||||||    
T  28879069 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaataacaacttatgaagat-----ttttgttagtgaaagaacttatga 28879163  T
Q  609 gttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
     |||| ||||||||||||||||||| | ||| |||||||||||||||    
T  28879164 attaacataaaagcttatttatttgcataagctatttttcataagct 28879210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 544 - 660
Target Start/End: Original strand, 2563402 - 2563519
Alignment:
Q  544 ttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatat 642  Q
    |||||||| ||||||||||||  |||||||   || ||| ||||||  ||| ||| | ||||||| |||| |||||||| || ||||||||| ||| | |    
T  2563402 ttgttaaagtagtttatgaaaaaacaacttttgaatatacaatttttattagtaagatcttatgaattaacataaaagcataattatttgtataagctct 2563501  T
Q  643 ttttcataagctcaatcc 660  Q
    ||||||||||||||||||    
T  2563502 ttttcataagctcaatcc 2563519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 585 - 649
Target Start/End: Original strand, 24087256 - 24087321
Alignment:
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcat 649  Q
    |||||||||||| ||||||||| | |||| ||||||||||||||||||| | ||| ||||||||||    
T  24087256 attttcgttaatgaaaacttataaattaaaataaaagcttatttatttgcataagctatttttcat 24087321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 733 - 797
Target Start/End: Original strand, 4034301 - 4034365
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccc 797  Q
    ||||| |||||||| |||| |||||| |||| ||| |||||| |||||||||| |||||||||||    
T  4034301 aagaagctaaaatgaattatattactaaaagtctgaagattttagcacaaggagtgccaaaaccc 4034365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 534 - 657
Target Start/End: Complemental strand, 10298978 - 10298855
Alignment:
Q  534 attcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    ||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| |||||| | ||||||||| |||| |||||||| ||| ||||||    
T  10298978 attcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttaatgagaacttatgaattaacataaaagc-tatctatttg 10298880  T
Q  634 ta-aagatatttttcataagctcaa 657  Q
     | ||| |||| |||||||||||||    
T  10298879 cataagctattattcataagctcaa 10298855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 564
Target Start/End: Complemental strand, 26047057 - 26046978
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 564  Q
    ||||||||||| |||| |||| ||| ||| || || |||||||||| ||||| ||||||||||| |  ||||||||||||    
T  26047057 ttgagcttatgtaaaacaacttatgcaaaaaagtaagcttttatttattattaacaagcttgttgaggtagtttatgaaa 26046978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 660
Target Start/End: Original strand, 30974043 - 30974150
Alignment:
Q  554 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 652  Q
    |||||||||||  ||||||||  ||  || ||||||||||| ||| | ||||||| |||  ||||||||||||||||||| | ||| | |||||||||||    
T  30974043 agtttatgaaaaaacaacttatgaatttacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataag 30974142  T
Q  653 ctcaatcc 660  Q
    | ||||||    
T  30974143 cacaatcc 30974150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 660
Target Start/End: Original strand, 2669659 - 2669809
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| ||| | || | ||||| | ||| |||||||  ||||||||||||  ||||||||  || ||| | ||||| ||| ||  | ||||||| |    
T  2669659 aaataaataagctctaatgtattatttataagtttgttaaggtagtttatgaaaaaacaacttatgaatatacatttttcattagtaggatcttatgaat 2669758  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||| ||||||||||||||||||  | ||| | |||||||||||||||||||    
T  2669759 taacataaaagcttatttattttcataagctctttttcataagctcaatcc 2669809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 577 - 654
Target Start/End: Complemental strand, 9131137 - 9131059
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    |||||| ||||||||||| |   ||||||||| |||| ||||||| ||||||||||| | ||| |||||||||||||||    
T  9131137 aagatacaattttcgttagtcggaacttatgaattaacataaaagtttatttatttgcataagctatttttcataagct 9131059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 600 - 657
Target Start/End: Original strand, 10213795 - 10213853
Alignment:
Q  600 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||| |||| ||| ||||||||||||||| | ||| ||||||||||||||||||    
T  10213795 aacttatgaattaacatacaagcttatttatttgcataagctatttttcataagctcaa 10213853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 485 - 531
Target Start/End: Complemental strand, 11988354 - 11988308
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 531  Q
    ||||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  11988354 ttgagcttatgaaaaataacttatgtaaataaatatgcttttatttt 11988308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 806
Target Start/End: Original strand, 25582581 - 25582654
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 806  Q
    |||||||||||||||| || ||||||||| | ||| | ||||||||||||| | ||| ||||  ||||||||||    
T  25582581 aagaaactaaaatggaatatattactgaacgcctgaatatttcagcacaagaagtgctaaaaatccagctgaaa 25582654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 486 - 531
Target Start/End: Complemental strand, 29713334 - 29713289
Alignment:
Q  486 tgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 531  Q
    |||||||||| ||||||||| ||| ||||||||| |||||||||||    
T  29713334 tgagcttatgaaaaataacttatgtaaataaataagcttttatttt 29713289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 657
Target Start/End: Original strand, 35055499 - 35055579
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||| | | | ||||||| |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  35055499 aagatacaattttcgttagtgagagcttatgaattaa-ataaaagcttatttatttacataagctatttttcataagctcaa 35055579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 544 - 633
Target Start/End: Complemental strand, 36907686 - 36907597
Alignment:
Q  544 ttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    |||||||  ||||||||||||  |||||||   || ||| ||||||||||| ||| | ||||||| |||  |||||||||||||||||||    
T  36907686 ttgttaaggtagtttatgaaaaaacaacttgtgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttg 36907597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 657
Target Start/End: Complemental strand, 37410922 - 37410841
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||| || |||||||||||  | ||| ||||||||||||||||||    
T  37410922 aagatacaattttcgttagtaagaacttataaattaaaatataaacttatttatttacataagctatttttcataagctcaa 37410841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 657
Target Start/End: Original strand, 42102183 - 42102264
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||||| | |  |||| | |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  42102183 aagatacaattttcgttaatgagaggttataaattaaaataaaagcttatttatttacataagctatttttcataagctcaa 42102264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 2e-42; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 485 - 660
Target Start/End: Original strand, 21788442 - 21788618
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||| |||||||||| | || ||| ||||||||| |||||||||| ||||||| ||||||||||| |||||||||||||  ||||||||  ||||||||    
T  21788442 ttgagtttatgcaaaacatcttatgcaaataaataagcttttatttattattcataagcttgttaagatagtttatgaaaaaacaacttatgaagataaa 21788541  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    |||||||||| | | | ||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  21788542 attttcgttagtgagagcttatgaattaatataaaagcttatttatttgcataagttatttttcataagctcaatcc 21788618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 733 - 831
Target Start/End: Original strand, 2702258 - 2702356
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 831  Q
    ||||||||||||||||||||| ||||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  2702258 aagaaactaaaatggattaaaatactgaaagcctcaagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 2702356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 12410887 - 12410790
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||| || || ||||||||||||| |||||||||||||||||| ||||||||    
T  12410887 aagaaactaaaatggattaaaatactgaaagcctggagatttcatcacaaagagtgacaaaaccccagctaaaagagtcaattacaagagtgccaaaa 12410790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 12422947 - 12422850
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||||| ||||||||| |||||||||||| ||||| || || ||||||||||||| |||||||||||||||||| ||||||||    
T  12422947 aagaaactaaaatggattaaaatactgaaagcctggagatttcatcacaaagagtgacaaaaccccagctaaaagagtcaattacaagagtgccaaaa 12422850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 733 - 815
Target Start/End: Complemental strand, 27271740 - 27271658
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaatt 815  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||| || |||||| |||||||||||||||||||    
T  27271740 aagaaactaaaatagattaaattactgaaagcctggagatttcagcacaaggagtgtcaaaactccagctgaaagagtcaatt 27271658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 6764520 - 6764423
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||||| |||||||||   ||||||||||||| ||||| || ||||||||||||| |||||||||||||||||| ||||||||    
T  6764520 aagaaactaaaatggattaaaatactgaaagctcggagatttcagcataaggagtgtcaaaaccccagctaaaagagtcaattacaagagtgccaaaa 6764423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 37648065 - 37647968
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    |||||| |||||||||||||| |||||||||  |||||||||||||||||||| |||||||||| ||||| |||||||||||||||||| || |||||    
T  37648065 aagaaattaaaatggattaaaatactgaaagtttggagatttcagcacaaggagtgccaaaacctcagctaaaagagtcaattacaagagtgtcaaaa 37647968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 733 - 822
Target Start/End: Complemental strand, 11031898 - 11031809
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 822  Q
    ||||| |||||||| || | |||| |||||| ||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||    
T  11031898 aagaagctaaaatgaatgatattattgaaagtctggagatttcagcataaggagtgccaaaaccccagctgaaagagtcaaatacaagaa 11031809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 740 - 820
Target Start/End: Original strand, 34394492 - 34394572
Alignment:
Q  740 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 820  Q
    ||||||| |||| ||||||||||| ||  |||||||| |||||||| ||||||||||||||||||||||||||||||||||    
T  34394492 taaaatgaattatattactgaaagcctaaagatttcaacacaaggagtgccaaaaccccagctgaaagagtcaattacaag 34394572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 553 - 654
Target Start/End: Original strand, 8832510 - 8832612
Alignment:
Q  553 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 651  Q
    ||||||||||||  |||  ||||||||||| ||||||||||| | ||||||||||| |||| ||||||||||||||||||| | ||| ||||||||||||    
T  8832510 tagtttatgaaaacacaggttagaaagatacaattttcgttagtgaaaacttatgaattaacataaaagcttatttatttgcataagctatttttcataa 8832609  T
Q  652 gct 654  Q
    |||    
T  8832610 gct 8832612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 502 - 657
Target Start/End: Original strand, 4004821 - 4004977
Alignment:
Q  502 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 601  Q
    |||| ||| |||||||||  ||||||| |  |||||| |||||| ||||| |||||||||||| |||||||||  ||| || ||||||||||| | | ||    
T  4004821 aacttatgcaaataaataatcttttatgtactattcataagctttttaaagtagtttatgaaaatacaacttatgaagctacaattttcgttagtgagaa 4004920  T
Q  602 cttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||| ||| ||||||||||| ||||| || | ||| |||||||||||| |||||    
T  4004921 cttatgaattactataaaagcttttttatctgcataagctatttttcataaactcaa 4004977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 485 - 654
Target Start/End: Original strand, 4026911 - 4027080
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||||||||||||||   || ||| ||||||||| |||||||| | |||| || |||||||| ||  ||||||||||||  ||| ||||  |||||| |    
T  4026911 ttgagcttatgcaaaactgcttatgcaaataaataagcttttatgtattat-cataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataca 4027009  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||||| |||| | | ||||||||| |||| |||| |||||||||||||| | ||| |||||||||||||||    
T  4027010 atttttgttagtgagaacttatgaattaacataatagcttatttatttgcataagctatttttcataagct 4027080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 480 - 574
Target Start/End: Complemental strand, 34913496 - 34913402
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 574  Q
    ||||||||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| ||| ||||||| |||||||||||||  ||||||||    
T  34913496 ttggattgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataagtttgttaagatagtttatgaaaaaacaactta 34913402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 489 - 657
Target Start/End: Original strand, 15155802 - 15155971
Alignment:
Q  489 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattt 588  Q
    ||||||| |||| |||| ||||||||||||| |||||||| | ||||| | || ||||||||   |||||||||||  |||| |||  ||| || |||||    
T  15155802 gcttatgtaaaacaacttatgaaaataaatatgcttttatgtattatttataatcttgttaatgaagtttatgaaaaaacaatttaagaaggtacaattt 15155901  T
Q  589 tcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
     ||||||| | ||||||||| |||| |||||| |||||||||||  | ||| | ||||||||||||||||    
T  15155902 ccgttaatgagaacttatgaattaagataaaaacttatttattttcataagctctttttcataagctcaa 15155971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 485 - 657
Target Start/End: Complemental strand, 33321413 - 33321240
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| ||||  || ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |    
T  33321413 ttgagcttatgcaaaacaacttgtgcaaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataca 33321314  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||| |||| | | | ||| ||| |||| ||||| | ||||||||||| | ||| |||||| |||||||||||    
T  33321313 atttttgttagtgagagcttgtgaattaacataaaggtttatttatttgcataagctattttacataagctcaa 33321240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 532 - 633
Target Start/End: Original strand, 42064883 - 42064984
Alignment:
Q  532 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 631  Q
    ||||||| |||||||||||  |||||||| |||  | ||||||  ||||||  |||||||||| ||| ||||||||| ||||||||||||||||||||||    
T  42064883 ttattcataagcttgttaaggtagtttataaaaaaataacttatgaagatatcattttcgttagtaagaacttatgaattaatataaaagcttatttatt 42064982  T
Q  632 tg 633  Q
    ||    
T  42064983 tg 42064984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 523 - 657
Target Start/End: Complemental strand, 36501578 - 36501443
Alignment:
Q  523 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 622  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||||||||| ||||| | | |||| |||| |||| ||||||||    
T  36501578 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagataaaatttgcgttagtgagaactcatgaattaacataaaagc 36501479  T
Q  623 ttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||| | ||| ||||||||| ||||||||    
T  36501478 ttatttatttgcataagctatttttcacaagctcaa 36501443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 577 - 654
Target Start/End: Original strand, 38216096 - 38216174
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    |||||| ||||||||||| | | |||||||||||||| ||||||||||||||||||| | ||| |||||||| ||||||    
T  38216096 aagatacaattttcgttagtgagaacttatgagttaacataaaagcttatttatttgcataagctatttttcgtaagct 38216174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 513 - 660
Target Start/End: Original strand, 11776997 - 11777145
Alignment:
Q  513 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtta 612  Q
    ||||||| |||||||| | ||||| | |||||||||||  ||||||||||||  ||| ||||  |||||| | |||| |||| | | ||||||| |  ||    
T  11776997 ataaataagcttttatgtattatttataagcttgttaagttagtttatgaaaacacagcttatgaagatacactttttgttagtgagaacttataaacta 11777096  T
Q  613 atataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    | |||||| |||||||||||| | ||| ||||||| |||||||||||||    
T  11777097 acataaaaccttatttatttgcagaagctatttttaataagctcaatcc 11777145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 25836787 - 25836641
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||  ||||  |||| | |||| |||||| | | |||||||||      
T  25836787 aaataaatatgcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacggcttatgaagacacaattatcgttagtgagaacttatga-a 25836689  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||| ||||||||||||||||||| | ||| |||| |||||||||||||    
T  25836688 taacataaaagcttatttatttgcataaggtattcttcataagctcaa 25836641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 733 - 810
Target Start/End: Original strand, 7900954 - 7901031
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 810  Q
    ||||| |||||||| | || ||||||||||| ||| ||||||||||| ||||  |||| ||| |||||||||||||||    
T  7900954 aagaagctaaaatgaaatatattactgaaagcctgaagatttcagcataaggtgtgccgaaaacccagctgaaagagt 7901031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 488 - 633
Target Start/End: Original strand, 29774733 - 29774878
Alignment:
Q  488 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 587  Q
    |||||||||| || |||| ||| |||||||||  |||||||   |||||||  || |||||||  ||||||||||||  ||  ||||  || ||| ||||    
T  29774733 agcttatgcataacaacttatgcaaataaataaacttttatgcattattcattagtttgttaaggtagtttatgaaaaaacggcttatgaaaatacaatt 29774832  T
Q  588 ttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    ||||||| | | ||||||||| ||||  ||||||||||||||||||    
T  29774833 ttcgttagtgagaacttatgaattaacgtaaaagcttatttatttg 29774878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 485 - 657
Target Start/End: Original strand, 37409628 - 37409801
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||| ||||||||| |||| ||| ||||||||| |||||||  | |||||| | || |||| ||  ||||||||||||  |||| |||  || ||| |    
T  37409628 ttgagcgtatgcaaaacaacttatgcaaataaataagcttttaagtattattctctagtttgtcaatgtagtttatgaaaaaacaatttatgaaaataca 37409727  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||| |||| | |||||||   | |||| |||||| |||| ||| ||||| ||| ||||||||||||||||||    
T  37409728 atttttgttattgaaaacttcgaaattaacataaaatcttagttacttgtataagctatttttcataagctcaa 37409801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 480 - 528
Target Start/End: Complemental strand, 21788620 - 21788572
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttat 528  Q
    |||||||||||||||| ||||||||| ||| ||||||||| ||||||||    
T  21788620 ttggattgagcttatgaaaaataacttatgcaaataaataagcttttat 21788572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 567 - 635
Target Start/End: Original strand, 35731203 - 35731271
Alignment:
Q  567 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 635  Q
    |||||||| ||| ||||||||||| ||||| ||| ||||||| ||||  ||||| ||||||||||||||    
T  35731203 acaacttataaaaataaaattttcattaatgaaatcttatgaattaacgtaaaatcttatttatttgta 35731271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 487 - 658
Target Start/End: Complemental strand, 38471890 - 38471718
Alignment:
Q  487 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 586  Q
    |||||||||||||| | || ||| ||||||||| |||||||| | ||||  | |||||| || |  ||||||||||||  |||  |||  ||| || |||    
T  38471890 gagcttatgcaaaacagcttatgcaaataaatatgcttttatgtgttatgtataagcttcttgatgtagtttatgaaaaaacagtttatgaaggtacaat 38471791  T
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaat 658  Q
    |||||||| | | ||||||||| |||| |||| |  ||||||||||||| ||| | ||||||||||| |||||    
T  38471790 tttcgttagtgagaacttatgaattaagataacaatttatttatttgtataagttctttttcataagttcaat 38471718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 564
Target Start/End: Complemental strand, 755843 - 755764
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 564  Q
    |||||||||||||||| |||| | | |||||| || |||||||| | ||||||| ||||||||||   ||||||||||||    
T  755843 ttgagcttatgcaaaacaacttacgcaaataattaagcttttatgtattattcagaagcttgttacggtagtttatgaaa 755764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 657
Target Start/End: Complemental strand, 30382300 - 30382197
Alignment:
Q  555 gtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagc 653  Q
    ||||| ||||| |||| |||| |||||| ||||||||||| | ||| ||||| | |||| | ||||||||||||||||  | ||  ||||||||||||||    
T  30382300 gtttacgaaagaacaatttaggaagatacaattttcgttagtgaaagcttataaattaaaacaaaagcttatttatttacataatctatttttcataagc 30382201  T
Q  654 tcaa 657  Q
    ||||    
T  30382200 tcaa 30382197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 567 - 633
Target Start/End: Complemental strand, 7480918 - 7480852
Alignment:
Q  567 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    ||||||||| |||||| ||||||| ||| | | ||||||||| |||| |||||| ||||||||||||    
T  7480918 acaacttaggaagatacaattttcattagtcagaacttatgaattaacataaaaacttatttatttg 7480852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 567 - 660
Target Start/End: Complemental strand, 12950134 - 12950040
Alignment:
Q  567 acaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||||||||  || ||| ||||||||||| ||| | ||||||| |||| ||||||||||| ||||||| | | | | |||||||||||||||||||    
T  12950134 acaacttatgaatatagaattttcgttagtaagatcttatgaattaacataaaagcttaattatttgcatatgctctttttcataagctcaatcc 12950040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 584 - 657
Target Start/End: Complemental strand, 22898359 - 22898285
Alignment:
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||| | |||||||||   |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  22898359 aattttcgttagtcaaaacttatagattaaaataaaagcttatttatttacataagctatttttcataagctcaa 22898285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 576 - 633
Target Start/End: Complemental strand, 23956274 - 23956217
Alignment:
Q  576 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    ||||||| ||||||||||||| | ||||||| | |||| |||||| ||||||||||||    
T  23956274 aaagatacaattttcgttaatgagaacttataaattaacataaaaacttatttatttg 23956217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 1e-40; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 480 - 660
Target Start/End: Complemental strand, 44613579 - 44613398
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    ||||||||||||||||||||| | || ||| ||||||||| |||||||||| ||||||| |||||||||||  ||||||||||||  ||||||||  | |    
T  44613579 ttggattgagcttatgcaaaacagcttatgcaaataaataagcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaacttatgacg 44613480  T
Q  580 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||| ||||||  ||||| | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  44613479 atacaatttttattaattagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 44613398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 78; E-Value: 8e-36
Query Start/End: Original strand, 733 - 830
Target Start/End: Original strand, 28782015 - 28782112
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  28782015 aagaaactaaaatggattaaaatactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 28782112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 733 - 831
Target Start/End: Complemental strand, 1032320 - 1032222
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 831  Q
    ||||||||||| |||| |||||||||||||| ||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||    
T  1032320 aagaaactaaattggactaaattactgaaagcctggagatttcagcacagggaatgctaaaaccccagctgaaagagtcaattacaagaatgccaaaac 1032222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 9949030 - 9948933
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||||| ||||||||| ||| ||||||||||||||||| | |||||||||||||| |||||||||||||||||| ||||||||    
T  9949030 aagaaactaaaatggattaaaatactgaaagcctgaagatttcagcacaaggagtaccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 9948933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 733 - 817
Target Start/End: Complemental strand, 11621464 - 11621380
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattac 817  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11621464 aagaagctaaaatggattatattactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaattac 11621380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 733 - 830
Target Start/End: Original strand, 9942602 - 9942699
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| || ||||||| || || ||| |||||||||||||| ||||||||    
T  9942602 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgtcaaaacctcaactaaaatagtcaattacaagagtgccaaaa 9942699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 733 - 813
Target Start/End: Original strand, 40871302 - 40871382
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 813  Q
    ||||| ||||||||||||| |||| | |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  40871302 aagaagctaaaatggattatattattaaaagcctggagatttcagcacaaggagtgccaaaatcccagctgaaagagtcaa 40871382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 485 - 629
Target Start/End: Complemental strand, 48021748 - 48021605
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||| ||||| || | ||| ||||||||| ||| |||||| ||||||| |||||||||||| ||||||||||||  | |||| |  |||||| |    
T  48021748 ttgagcttatacaaaacaatttatgcaaataaataagctcttatttattattcataagcttgttaaagtagtttatgaaa-aataactaatgaagataca 48021650  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttattta 629  Q
    |||||| ||| | ||||||||||| |||||||||||  |||||||    
T  48021649 attttcattagtgaaaacttatgaattaatataaaaaattattta 48021605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 532 - 657
Target Start/End: Original strand, 39279461 - 39279588
Alignment:
Q  532 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaa-taaaaacttatgagttaatataaaagcttatttat 630  Q
    ||||||| |||||||||||  | ||||||||||   || ||||| |||||| |||||||||||| | | ||| ||||| |||| ||||||||||||||||    
T  39279461 ttattcataagcttgttaaggtggtttatgaaaaatcagcttaggaagatacaattttcgttaattgagaacctatgaattaacataaaagcttatttat 39279560  T
Q  631 ttgta-aagatatttttcataagctcaa 657  Q
    ||||| ||| ||||||||||||||||||    
T  39279561 ttgtataagctatttttcataagctcaa 39279588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 480 - 633
Target Start/End: Complemental strand, 28759946 - 28759790
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    |||||||||| ||||| |||| |||| ||||||| ||| | | |||||||| ||||||| |||||||||||  |||||||| |||  | |||||| ||||    
T  28759946 ttggattgagtttatgtaaaacaacttatgaaaaaaaaaaagtttttatttattattcataagcttgttaaggtagtttataaaaaaataacttataaag 28759847  T
Q  580 ataa---aattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    ||||   ||| || |||| ||| ||||||||| || |||||||||||||||| ||||    
T  28759846 ataatataatatttgttagtaagaacttatgaattgatataaaagcttatttgtttg 28759790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 485 - 657
Target Start/End: Complemental strand, 29390651 - 29390479
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||| ||||| |||| |||| ||| |||||||||  |||| || | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |    
T  29390651 ttgagtttatggaaaacaacttatgcaaataaataatctttgatgtattattcataagcttgtaaaggtagtttatgaaa-aacaacttatgaagataca 29390553  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||   | || |||||| |||| ||||||||||||||||||| | ||  ||||||||||||||||||    
T  29390552 attttcgttagctagaatttatgaattaacataaaagcttatttatttgcataaactatttttcataagctcaa 29390479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 487 - 657
Target Start/End: Original strand, 22032749 - 22032920
Alignment:
Q  487 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 586  Q
    ||||||||| |||| |||| ||| ||||||||| | |||||| | ||||| | |||| ||||||  ||||||||||||  |||| |||  ||| || |||    
T  22032749 gagcttatgtaaaacaacttatgcaaataaatatgtttttatgtattatttataagcatgttaatgtagtttatgaaaaaacaatttatgaaggtacaat 22032848  T
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||||| | | ||||||| | |||| |||||| |||||||||||| | ||| | ||||||||||||||||    
T  22032849 tttcgttagtgagaacttataaattaagataaaaacttatttatttgcataagctttttttcataagctcaa 22032920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 511 - 657
Target Start/End: Original strand, 29378656 - 29378803
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||| |  || |||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| ||| ||||||||| |    
T  29378656 aaataaataagcttttatgtattatttatgagtttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtaagaacttatgaat 29378755  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||  |||||||||||||||||| | ||| |||||||||||| |||||    
T  29378756 taacgtaaaagcttatttatttgcataagctatttttcataaactcaa 29378803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 540 - 660
Target Start/End: Complemental strand, 47654460 - 47654339
Alignment:
Q  540 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aag 638  Q
    |||||||||||  ||||||||||||  |||  |||  ||| || ||||||||||| | | ||||||||| |||| |||||| |||||||||||| | |||    
T  47654460 aagcttgttaatgtagtttatgaaaaaacagtttatgaaggtacaattttcgttagtgagaacttatgaattaagataaaaacttatttatttgcataag 47654361  T
Q  639 atatttttcataagctcaatcc 660  Q
    || |||||||||||||||||||    
T  47654360 atctttttcataagctcaatcc 47654339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 522 - 660
Target Start/End: Complemental strand, 37465951 - 37465811
Alignment:
Q  522 cttttattttttattcacaagcttgttaaaatagtttat-gaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 620  Q
    ||||||||| ||||||| || |||||||| ||||||||| ||||  ||||||||  |||||| ||| || |||    | ||||||||| |||||||||||    
T  37465951 cttttatttattattcataaacttgttaagatagtttatagaaaaaacaacttattaagatacaatatttgttggcgagaacttatgaattaatataaaa 37465852  T
Q  621 gcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||||||||||||| | ||| || ||||||||||||| ||||    
T  37465851 gcttatttatttgcataagctaattttcataagctcgatcc 37465811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 633
Target Start/End: Original strand, 47648549 - 47648670
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    |||||||||  ||||||||| |||||||| | |||||||| |||||||||||||  ||||  ||  ||||| || ||||||||| | ||||||||||| |    
T  47648549 aaataaataaacttttatttattattcacgaacttgttaagatagtttatgaaaaaacaatctattaagat-aatttttcgttagtgaaaacttatgaat 47648647  T
Q  611 taatataaaagcttatttatttg 633  Q
    ||||||||||   ||||||||||    
T  47648648 taatataaaaatatatttatttg 47648670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 485 - 657
Target Start/End: Original strand, 38372543 - 38372716
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| | || ||| ||||||||| ||| |||| | ||||||| ||| |||| ||  ||||||| ||||   || || |  |||| | |    
T  38372543 ttgagcttatgcaaaacagcttatgcaaataaataagctcttatgtattattcataagtttgtcaaggtagtttacgaaaaagcagctcaagaagaaaca 38372642  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||||||| | | ||||||||| |||| ||||||||| ||||||||| |  || ||||||||||||||||||    
T  38372643 attttcgttagtgagaacttatgaattaacataaaagctgatttatttgcattagctatttttcataagctcaa 38372716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 521 - 633
Target Start/End: Complemental strand, 14691364 - 14691252
Alignment:
Q  521 gcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 620  Q
    |||||||| | ||||||| |||||||| ||  || |||||||||  |||| |||  |||||| ||||||||||| | | ||||||||| |||| ||||||    
T  14691364 gcttttatgtattattcataagcttgtcaatgtaatttatgaaaaaacaatttatgaagatataattttcgttagtgagaacttatgaattaacataaaa 14691265  T
Q  621 gcttatttatttg 633  Q
    | |||||||||||    
T  14691264 ggttatttatttg 14691252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 487 - 654
Target Start/End: Original strand, 22575573 - 22575741
Alignment:
Q  487 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 586  Q
    ||||||||| |||| | || ||| ||||||||||| |||||| | ||||| | ||| ||||||| ||| |||||||||  |||  |||  |||||| |||    
T  22575573 gagcttatgtaaaacatcttatgcaaataaatacgtttttatgtattatttataagtttgttaagatattttatgaaaaaacagtttatgaagatacaat 22575672  T
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    |||||||| ||| | ||||| | |||| |||||| ||||||||| |  | ||| |||||||||||||||    
T  22575673 tttcgttagtaagagcttataaattaaaataaaaacttatttatctacataagctatttttcataagct 22575741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 600 - 654
Target Start/End: Original strand, 33204934 - 33204989
Alignment:
Q  600 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||||||||| |||| ||||||||||||||||||| | |||||||||||||||||||    
T  33204934 aacttatgaattaacataaaagcttatttatttgcataagatatttttcataagct 33204989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 735 - 813
Target Start/End: Original strand, 12622906 - 12622984
Alignment:
Q  735 gaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 813  Q
    ||||||||||||||||| ||||||||||| |||||||||| |||| || || || |||||| |||  ||| ||||||||    
T  12622906 gaaactaaaatggattatattactgaaagcctggagattttagcataaagagtgtcaaaactccaattgatagagtcaa 12622984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 657
Target Start/End: Complemental strand, 16932939 - 16932858
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16932939 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16932858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 657
Target Start/End: Complemental strand, 16938322 - 16938241
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16938322 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16938241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 657
Target Start/End: Original strand, 16958892 - 16958973
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||| ||||| ||||| | |||| |||||||||||||||| |  | ||| ||||||||||||||||||    
T  16958892 aagatacaattttcgttagtaaaagcttataaattaaaataaaagcttatttatatacataagctatttttcataagctcaa 16958973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 657
Target Start/End: Complemental strand, 33288084 - 33288003
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| | ||||||||| | ||||||||||| |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  33288084 aagatacagttttcgttagtgaaaacttatgaattaacataaaaacttatttatttggataagctagttttcataagctcaa 33288003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 740 - 820
Target Start/End: Original strand, 17193893 - 17193972
Alignment:
Q  740 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 820  Q
    ||||||| |||||| ||||||||| | ||||||||||| | ||||| || | ||| ||||||||||| |||||||||||||    
T  17193893 taaaatgtattaaaatactgaaagccgggagatttcagtataaggagtgtc-aaatcccagctgaaacagtcaattacaag 17193972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 740 - 810
Target Start/End: Complemental strand, 15669787 - 15669718
Alignment:
Q  740 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 810  Q
    ||||||||| || ||||||||| | ||||| ||||||||| ||| | ||| ||||||||||||||||||||    
T  15669787 taaaatggaatatattactgaa-gcctggaaatttcagcataagaagtgcaaaaaccccagctgaaagagt 15669718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 495 - 657
Target Start/End: Original strand, 34922926 - 34923091
Alignment:
Q  495 gcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagta--caacttagaaagataaaattttcgt 592  Q
    |||||| |||| ||| ||||||||| |||||||| | ||||||| ||| |||| ||  |||||||| |||  |  || |||   |||||| | |||||||    
T  34922926 gcaaaacaacttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttataaaaaaaaacagcttgtgaagatacacttttcgt 34923025  T
Q  593 taataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    || | | |||||||||  ||| ||||||||||||||||||| | ||| ||||||| ||||||||||    
T  34923026 tagtgagaacttatgaactaacataaaagcttatttatttgcataagctattttttataagctcaa 34923091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 511 - 660
Target Start/End: Original strand, 35809101 - 35809251
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| || || || | ||||| | |||||||||||  ||||||||||||  ||||||||  || ||| ||||||||  | ||| |  |||||| |    
T  35809101 aaataaataagcattaatgtattatttataagcttgttaacgtagtttatgaaaaaacaacttaagaatatacaattttcgccagtaagattttatgaat 35809200  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||| ||||||||||| ||||||  | ||| | |||||||||||||||||||    
T  35809201 taacataaaagcttaattatttacataagctctttttcataagctcaatcc 35809251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 524 - 633
Target Start/End: Complemental strand, 8180653 - 8180544
Alignment:
Q  524 tttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagct 623  Q
    ||||||| ||||| | |||||||||||  |||||||| |||    |||||| ||| ||| ||| ||  ||| | ||||||||||| |||||||||||| |    
T  8180653 tttatttattatttataagcttgttaaggtagtttataaaaaattaacttataaaaatataatatttattagtgaaaacttatgaattaatataaaagtt 8180554  T
Q  624 tatttatttg 633  Q
    ||||||||||    
T  8180553 tatttatttg 8180544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 810
Target Start/End: Original strand, 18299447 - 18299523
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 810  Q
    ||||| |||||||||| || ||||||||| | ||||| | ||||||||||| | ||| ||||||||| ||||||||||    
T  18299447 aagaagctaaaatggaatatattactgaa-gcctggaaagttcagcacaagaagtgcaaaaaccccatctgaaagagt 18299523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 810
Target Start/End: Complemental strand, 29627029 - 29626953
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 810  Q
    ||||| |||||||||| || | ||||||| | ||||| |||| |||||||| | ||| ||||||||||||||||||||    
T  29627029 aagaagctaaaatggagtataatactgaa-gcctggaaattttagcacaagaagtgcaaaaaccccagctgaaagagt 29626953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 496 - 658
Target Start/End: Original strand, 43391717 - 43391880
Alignment:
Q  496 caaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaa 595  Q
    ||||| |||| ||| |||||||||  ||| | ||| ||||||| ||| |||||||  ||||||||||||  | || |||  |||||| |||||| |||      
T  43391717 caaaacaacttatgtaaataaataaacttatgtttattattcataagtttgttaaggtagtttatgaaaaaataatttatgaagatataatttttgtttg 43391816  T
Q  596 taaaaacttatgagttaatataaaagcttatttattt--gtaaagatatttttcataagctcaat 658  Q
    | ||||||||| | | ||||||||| |||||||||||  |||||  |||||||||||| ||||||    
T  43391817 tgaaaacttataaataaatataaaaacttatttatttacgtaaa-ctatttttcataaactcaat 43391880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 600 - 660
Target Start/End: Complemental strand, 43818864 - 43818803
Alignment:
Q  600 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||||||||| |||| |||||| |||||||||||| | ||| | |||||||||||||||||||    
T  43818864 aacttatgaattaagataaaaacttatttatttgcataagctctttttcataagctcaatcc 43818803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 2e-33; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 480 - 660
Target Start/End: Original strand, 41228883 - 41229064
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    ||||||||||||||||||||| | || ||| |  |||||| |||||||||| ||||||| |||||||||||  ||||||||||||  |||||| |  |||    
T  41228883 ttggattgagcttatgcaaaacagcttatgcaggtaaataggcttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactgatgaag 41228982  T
Q  580 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||| ||||||| ||| | | ||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  41228983 atacaattttcattagttagaacttatgaattaatataaaagctaatttatttgcataagctatttttcataagctcaatcc 41229064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 43499397 - 43499300
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||||| |||||||||  |||||||||||||||||||| |||||||||||||||| |||||||||||||||||| ||||||||    
T  43499397 aagaaactaaaatggattaaaatactgaaagcttggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcaattacaagagtgccaaaa 43499300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 733 - 831
Target Start/End: Original strand, 39059723 - 39059821
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 831  Q
    ||||||||||||||||||||||||||||||| ||| ||| ||||||||||| | ||||||||||| |||||||||||| ||||||||||||| ||||||    
T  39059723 aagaaactaaaatggattaaattactgaaagtctgaagaattcagcacaagcagtgccaaaacccaagctgaaagagttaattacaagaatgtcaaaac 39059821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 736 - 813
Target Start/End: Original strand, 37870649 - 37870726
Alignment:
Q  736 aaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 813  Q
    |||||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  37870649 aaactaaaatggattatattactcaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 37870726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 734 - 829
Target Start/End: Original strand, 36651742 - 36651837
Alignment:
Q  734 agaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 829  Q
    |||||||||||||||||||| ||  |||||  |||||||||||||||||||| |||||||||||||||| ||||||||| |||||||| |||||||    
T  36651742 agaaactaaaatggattaaaatatcgaaagtttggagatttcagcacaaggagtgccaaaaccccagctaaaagagtcagttacaagagtgccaaa 36651837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 480 - 654
Target Start/End: Complemental strand, 46704375 - 46704201
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    |||||||||||||||| |||| |||| ||| |||||| || |||||||||| |||||||  ||||||||||  ||||||||||||  ||| ||||  |||    
T  46704375 ttggattgagcttatgtaaaacaacttatgcaaataa-taagcttttatttattattcatgagcttgttaaggtagtttatgaaaaaacagcttatgaag 46704277  T
Q  580 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||||||||||| ||| | | ||||||||| |||||||||||  ||| ||||||| | ||| |||||||||||||||    
T  46704276 ataaaattttcattagtgagaacttatgaattaatataaaaagttacttatttgcataagttatttttcataagct 46704201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 733 - 831
Target Start/End: Original strand, 9896508 - 9896606
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaac 831  Q
    ||||||||||||||||| |||||| ||||||  |||| |||| |||||||||| |||||||||||||| ||||| |||||||| |||||||||||||||    
T  9896508 aagaaactaaaatggataaaattagtgaaagcttggaaatttaagcacaaggagtgccaaaaccccagatgaaaaagtcaattgcaagaatgccaaaac 9896606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 521 - 657
Target Start/End: Complemental strand, 18630960 - 18630823
Alignment:
Q  521 gcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaa 620  Q
    |||||||||| |||| ||  ||||||||||  ||||||||||||  ||| ||||  |||||||| ||||||||| | | ||||||||| |||||||||||    
T  18630960 gcttttatttattatccatgagcttgttaaggtagtttatgaaaaaacagcttatgaagataaagttttcgttagtgagaacttatgaattaatataaaa 18630861  T
Q  621 gcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||||| | ||| ||||||||||||||||||    
T  18630860 gcttatttatttgcataagctatttttcataagctcaa 18630823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 485 - 652
Target Start/End: Original strand, 29877624 - 29877792
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| || | ||| ||||||||| |||||||| | ||||||| ||||||| |||  ||||||||||||   || ||||  |||||| |    
T  29877624 ttgagcttatgcaaaacaatttatgcaaataaataagcttttatgtattattcataagcttgctaaggtagtttatgaaaaagcagcttatgaagataca 29877723  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 652  Q
    ||||| |||| | | ||||||||| |||| |||||||||||| |||||| | ||| |||||||||||||    
T  29877724 atttttgttagtgagaacttatgaattaacataaaagcttatatatttgcataagctatttttcataag 29877792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 485 - 657
Target Start/End: Original strand, 23297423 - 23297593
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||||| || ||| ||||||||| |||||||| | ||||||| ||| |||| ||  |||||||||||   ||| ||||  |||||| |    
T  23297423 ttgagcttatgcaaaatagcttatgcaaataaataagcttttatgtattattcataagtttgtcaaggtagtttatgaa---acagcttatgaagataca 23297519  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||| ||||   | ||||||||| |||  ||||||||||||||||||| | ||| ||||||||||||||||||    
T  23297520 atttttgttagcgagaacttatgaattagcataaaagcttatttatttgcataagctatttttcataagctcaa 23297593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 48591499 - 48591352
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| | |||||| | ||||||| | |||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||||| | ||||||||| |    
T  48591499 aaataaataagtttttatatattattcatacgcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttaatgagaacttatgaat 48591400  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||  |||||||||||||||||| | ||| ||||||||||||||||||    
T  48591399 taacgtaaaagcttatttatttgcataagctatttttcataagctcaa 48591352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 1e-19
Query Start/End: Original strand, 736 - 830
Target Start/End: Complemental strand, 7743669 - 7743575
Alignment:
Q  736 aaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||  ||||||||  |||||||||||||||||||| |||||||||   |||| |||||||||||||||||| || |||||    
T  7743669 aaactaaaatggattaaaaaactgaaagcatggagatttcagcacaaggagtgccaaaacttaagctaaaagagtcaattacaagagtgtcaaaa 7743575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 513 - 633
Target Start/End: Original strand, 36298344 - 36298465
Alignment:
Q  513 ataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-aaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 611  Q
    ||||||| |||||||||| ||||| | ||  |||||||||||||||||| |||  |||| |||  |||||||| |||| |||||| ||||||||||| ||    
T  36298344 ataaatatgcttttatttgttatttataactttgttaaaatagtttatggaaaaaacaatttatgaagataaattttttgttaatgaaaacttatgaatt 36298443  T
Q  612 aatataaaagcttatttatttg 633  Q
    |||||||||| |||||||||||    
T  36298444 aatataaaagtttatttatttg 36298465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 485 - 632
Target Start/End: Complemental strand, 18424378 - 18424232
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| || | ||  ||||||||| |||||||| | ||||||| || ||||| ||  ||||||||||||  |||| |||  |||||| |    
T  18424378 ttgagcttatgcaaaacaatttatacaaataaataagcttttatgtattattcataaacttgtgaaggtagtttatgaaaa-acaatttatgaagataca 18424280  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 632  Q
    ||||| |||| | ||||||||||| |||| ||||||||||||||||||    
T  18424279 atttttgttattgaaaacttatgaattaacataaaagcttatttattt 18424232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 736 - 830
Target Start/End: Complemental strand, 42718669 - 42718574
Alignment:
Q  736 aaactaaaatggattaaattactgaaaggctggagatttcagca-caaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||  |||||||| ||||||||||||||| |||||| ||| |||||||| ||| ||||||| ||||| |||| ||||||||    
T  42718669 aaactaaaatggattaaaaaactgaaagcctggagatttcagcaccaaggagtgctaaaaccccggctaaaagagttaattataagagtgccaaaa 42718574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 480 - 574
Target Start/End: Complemental strand, 213053 - 212960
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 574  Q
    ||||||||||||||||||||| |||| ||| ||||||||| | |||||||| ||||||| |||||||||||  ||||||||||||  ||||||||    
T  213053 ttggattgagcttatgcaaaacaacttatgcaaataaataag-ttttatttattattcataagcttgttaaggtagtttatgaaaaaacaactta 212960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 733 - 822
Target Start/End: Original strand, 23106753 - 23106842
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 822  Q
    ||||| |||||||  |||| |||||||||||  |||||||||||||| ||||| |||||||||||||  |||||||||||| ||||||||    
T  23106753 aagaagctaaaataaattatattactgaaagtatggagatttcagcataaggagtgccaaaaccccatttgaaagagtcaaatacaagaa 23106842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 2548122 - 2547975
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| | |||||||| |||||||  ||| | ||||  ||||||||||||  |||| |||  ||||||||||||||| |||| | ||||||| | |    
T  2548122 aaataaataagtttttatttgttattcatgagcctattaagttagtttatgaaaaaacaatttatgaagataaaattttcgctaatgagaacttataaat 2548023  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||||||| |||||||||||| | ||| | ||| ||||||||||||    
T  2548022 taatataaaaacttatttatttgcataagctctttctcataagctcaa 2547975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 523 - 657
Target Start/End: Original strand, 17222852 - 17222987
Alignment:
Q  523 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 622  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  |||  |||  |||||| ||||||||||| | | ||||||||| |||| |||||| |    
T  17222852 ttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagattatgaagatacaattttcgttagttagaacttatgaattaacataaaaac 17222951  T
Q  623 ttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||| | ||| ||||||||||||||||||    
T  17222952 ttatttatttgaataagctatttttcataagctcaa 17222987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 511 - 633
Target Start/End: Original strand, 896981 - 897103
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    |||||||||  ||||||| | ||||||| |||||||| ||  ||||||||||||  |||| |||   |||||  |||||||||| | ||||||||| | |    
T  896981 aaataaataaacttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacaatttacgtagatacgattttcgttagtgaaaacttataaat 897080  T
Q  611 taatataaaagcttatttatttg 633  Q
    |||||||||||||||||||||||    
T  897081 taatataaaagcttatttatttg 897103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 488 - 654
Target Start/End: Complemental strand, 42611966 - 42611799
Alignment:
Q  488 agcttatgcaaaataactaatgaaaataaatacgcttt-tattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 586  Q
    ||||||||||||| |||| ||| ||||||||| ||||| ||| | ||||||| ||||||||  |  ||||||||||||  ||||||||  |||||| | |    
T  42611966 agcttatgcaaaacaacttatgcaaataaataagctttatatgtattattcataagcttgtcgag-tagtttatgaaaaaacaacttatgaagatacagt 42611868  T
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg--taaagatatttttcataagct 654  Q
    |||||| | | | ||||||||| |||| |||||||||||||||||||  ||||  |||||||||||||||    
T  42611867 tttcgt-agtgacaacttatgaattaacataaaagcttatttatttgcataaatctatttttcataagct 42611799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 485 - 594
Target Start/End: Complemental strand, 7206687 - 7206578
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||||||||||| || | || ||| |||| |||| |||||||||| |||||||| ||| ||||||  ||||||||||||  ||||||||  ||||||||    
T  7206687 ttgagcttatgcagaacagcttatgcaaatgaataagcttttatttattattcacgagcctgttaaggtagtttatgaaaaaacaacttatgaagataaa 7206588  T
Q  585 attttcgtta 594  Q
     |||||||||    
T  7206587 gttttcgtta 7206578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 480 - 656
Target Start/End: Complemental strand, 8057194 - 8057017
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    |||||||||||||||| ||||||||||||| ||| ||||| | |||||||| ||||||| |||||||| ||  ||| ||| ||||  || | |||  |||    
T  8057194 ttggattgagcttatgaaaaataactaatgcaaaaaaataagtttttatttattattcataagcttgtcaaggtagcttaagaaaaaacgatttatgaag 8057095  T
Q  580 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgtaaaga-tatttttcataagctca 656  Q
    ||| ||| || |||  | | ||||||| | ||||||||||| ||||||| |||| | ||| || ||||||||||||||    
T  8057094 atacaatatttgttcgtgagaacttataaattaatataaaaacttatttgtttggatagactaattttcataagctca 8057017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 511 - 654
Target Start/End: Original strand, 36740915 - 36741059
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | |||| || |||||||| ||| |||||||||||| ||||  | |  |||||| ||||||| ||| | | ||||||||| |    
T  36740915 aaataaataagcttttatatattatgcataagcttgtcaaagtagtttatgaaaatacagttcatgaagatacaattttcattagtgagaacttatgaat 36741014  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
     || | ||||||||||||||||| | ||| |||||||||||||||    
T  36741015 caacacaaaagcttatttatttgcataagctatttttcataagct 36741059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 485 - 632
Target Start/End: Complemental strand, 38345922 - 38345776
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| | || ||  ||||||||| |||||||| |  |||||| ||| |||| ||| ||||||||||||  ||||||||  |||||| |    
T  38345922 ttgagcttatgcaaaacagcttatccaaataaataagcttttatgtagtattcataag-ttgtcaaagtagtttatgaaaaaacaacttatgaagataca 38345824  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 632  Q
    |||||  |||   | ||||||||| |||| ||||||||||||||||||    
T  38345823 atttttattagccagaacttatgaattaacataaaagcttatttattt 38345776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 633
Target Start/End: Original strand, 7148783 - 7148905
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  |||||| |||||  ||| |||| ||| ||| ||||||| ||| | | ||||||||| |    
T  7148783 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttttgaaaaaacagcttataaaaatacaattttctttagtcagaacttatgaat 7148882  T
Q  611 taatataaaagcttatttatttg 633  Q
    ||  |||||||||||||||||||    
T  7148883 tagcataaaagcttatttatttg 7148905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 488 - 657
Target Start/End: Complemental strand, 12495744 - 12495572
Alignment:
Q  488 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaa--tagtttatgaaagtacaacttagaaagataaaa 585  Q
    |||||| |||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||||  ||||||||||||  ||| || |  |||||| ||    
T  12495744 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 12495645  T
Q  586 ttttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    | ||| ||| | | ||||||| | |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  12495644 tattcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaa 12495572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 480 - 657
Target Start/End: Original strand, 11298573 - 11298740
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    ||||||||||||||||||||| | || ||| || ||| || |||||||||| |||||||  ||||| ||||  ||||||||||| |           |||    
T  11298573 ttggattgagcttatgcaaaacagcttatgcaagtaattaagcttttatttattattcatgagcttcttaaggtagtttatgaatg-----------aag 11298661  T
Q  580 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||| ||||||||| | | |||||| || ||| |||||||| ||||||||||| | ||| ||||||||||||||||||    
T  11298662 ataaagttttcgttagtgagaacttaagaattattataaaagtttatttatttgcataagctatttttcataagctcaa 11298740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 733 - 805
Target Start/End: Complemental strand, 48640836 - 48640764
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaa 805  Q
    |||||||||||||||| || ||||||||| | ||| ||||||||||||||||| ||| |||| ||||| ||||    
T  48640836 aagaaactaaaatggaatatattactgaacgcctgaagatttcagcacaaggagtgctaaaaacccagttgaa 48640764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 740 - 820
Target Start/End: Original strand, 54898895 - 54898975
Alignment:
Q  740 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaag 820  Q
    ||||||| | || |||||||||||  ||||||||| || | ||||| || ||||||| |||||||||||||||||||||||    
T  54898895 taaaatgaaatatattactgaaagtttggagattttagtataaggagtgtcaaaacctcagctgaaagagtcaattacaag 54898975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 511 - 606
Target Start/End: Complemental strand, 43983457 - 43983362
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttat 606  Q
    ||||||||| || || || | ||||| | ||||||||||| ||||||||| |||  |||||||| ||| ||| ||||||||||||||||| |||||    
T  43983457 aaataaataagcattaatgtattatttataagcttgttaagatagtttataaaaaaacaacttataaacatacaattttcgttaataaaatcttat 43983362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 577 - 635
Target Start/End: Original strand, 48721897 - 48721955
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 635  Q
    |||||| |||||| |||| | | ||||||||| ||||||||||||||||||||||||||    
T  48721897 aagatataatttttgttagtgagaacttatgaattaatataaaagcttatttatttgta 48721955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 488 - 564
Target Start/End: Original strand, 948060 - 948136
Alignment:
Q  488 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 564  Q
    ||||||||||||||| || ||||||||||||| |||||||| | ||||||| ||  |||| ||  ||||||||||||    
T  948060 agcttatgcaaaatagcttatgaaaataaataagcttttatgtattattcataactttgtcaaggtagtttatgaaa 948136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 564
Target Start/End: Original strand, 3564205 - 3564284
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 564  Q
    |||||||||||||||| | || |||||||||||||  ||||||| | ||||||| ||| |||| ||  ||||||||||||    
T  3564205 ttgagcttatgcaaaacagcttatgaaaataaataaacttttatatattattcataagtttgtcaaggtagtttatgaaa 3564284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 584 - 654
Target Start/End: Original strand, 8130563 - 8130634
Alignment:
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    |||||| |||| | ||||||||||| |||| |||||| |||||||||||| | ||| |||||||||||||||    
T  8130563 aatttttgttagtgaaaacttatgaattaacataaaaacttatttatttgcacaagctatttttcataagct 8130634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 564
Target Start/End: Complemental strand, 43699584 - 43699505
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 564  Q
    ||||||||||| |||| |||| ||  ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||    
T  43699584 ttgagcttatgaaaaacaacttatacaaataaataagcttttatgtcttattcataagcttgtcaatgtagtttatgaaa 43699505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 480 - 531
Target Start/End: Original strand, 46175902 - 46175953
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttatttt 531  Q
    |||||||||||||||| ||||||||| ||| ||||||||| || ||||||||    
T  46175902 ttggattgagcttatgaaaaataacttatgtaaataaataagcatttatttt 46175953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 584 - 657
Target Start/End: Complemental strand, 14987602 - 14987528
Alignment:
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||| | | ||||||||| ||||||||||| ||||||||||| || ||| | |||||||||| |||||    
T  14987602 aattttcgttagtgagaacttatgaattaatataaaaacttatttatttatataagctgtttttcataaactcaa 14987528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 598 - 654
Target Start/End: Original strand, 30956782 - 30956839
Alignment:
Q  598 aaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||||||||||| ||||| ||||| |||||||||||| | ||| |||||||||||||||    
T  30956782 aaaacttatgaattaatgtaaaaacttatttatttgcataagctatttttcataagct 30956839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 557 - 657
Target Start/End: Original strand, 31022457 - 31022558
Alignment:
Q  557 ttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctc 655  Q
    ||||||||  ||| |||| ||||||| ||||||||| | | ||||||||||| ||||  |||| ||||||||||||| | ||| | |||||||||| |||    
T  31022457 ttatgaaaaaacagcttataaagatacaattttcgtcagtgaaaacttatgaattaaggtaaatgcttatttatttgcataagttgtttttcataatctc 31022556  T
Q  656 aa 657  Q
    ||    
T  31022557 aa 31022558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 554 - 654
Target Start/End: Original strand, 35405738 - 35405838
Alignment:
Q  554 agtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 652  Q
    |||||||||||  ||| ||||  |||||| ||||||||||| ||| | || || | |||| ||||||||||||||||||| | ||| |||||||||||||    
T  35405738 agtttatgaaaaaacagcttatgaagatagaattttcgttagtaagacct-attaattaacataaaagcttatttatttgcataagctatttttcataag 35405836  T
Q  653 ct 654  Q
    ||    
T  35405837 ct 35405838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 585 - 657
Target Start/End: Complemental strand, 42617231 - 42617158
Alignment:
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||||||| | ||||||||| | |||| |||||| |||||||||||  | ||| ||||||||||||||||||    
T  42617231 attttcgttagtgaaaacttataaattaaaataaaaacttatttatttacataagctatttttcataagctcaa 42617158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 657
Target Start/End: Original strand, 47202902 - 47202983
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||| | | | ||||| | |||| ||||||||||| |||||| || ||| ||||||||||||||||||    
T  47202902 aagatacaattttcgttagtgagatcttataaattaaaataaaagcttacttatttatataagttatttttcataagctcaa 47202983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 1e-31; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 480 - 660
Target Start/End: Complemental strand, 9572891 - 9572709
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaa 578  Q
    ||||||||||||||||||||| | ||  || ||||||||| |||||| |||| ||||||| ||| |||||||  ||||||||||||  |||| |||  ||    
T  9572891 ttggattgagcttatgcaaaacagcttttgcaaataaataagctttttatttattattcataagtttgttaaggtagtttatgaaaaaacaatttatgaa 9572792  T
Q  579 gataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    |||||| |||| |||| | | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  9572791 gataaagtttttgttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 9572709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 733 - 822
Target Start/End: Original strand, 19227887 - 19227976
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 822  Q
    ||||| ||||||||||||| ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  19227887 aagaagctaaaatggattatattactgaaagcctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaaatacaagaa 19227976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 33766456 - 33766359
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| | |||||||||||||||||| || |||||    
T  33766456 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgccaaaaccccagttaaaagagtcaattacaagagtgtcaaaa 33766359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 70; E-Value: 5e-31
Query Start/End: Original strand, 733 - 830
Target Start/End: Original strand, 51534478 - 51534575
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||||||||| |||||||||||| ||| |||||||||||||||||| ||||||||    
T  51534478 aagaaactaaaatggattaaaataccgaaagcctggagatttcagcacaaggagtgccaaaacccctgctaaaagagtcaattacaagagtgccaaaa 51534575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 733 - 821
Target Start/End: Original strand, 4532087 - 4532175
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaaga 821  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||    
T  4532087 aagaaactaaaatggattaaaatactgaaagtctggagatttcagcacaaggagtgccaaaaccccaggtaaaagagtcaattacaaga 4532175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 480 - 660
Target Start/End: Complemental strand, 46689656 - 46689475
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    ||||||||||||||||||||| |  | ||| ||||||| | |||||||||| |||||||  ||||||||||  || ||||| | |  ||||||||  ||     
T  46689656 ttggattgagcttatgcaaaacagtttatgcaaataaaaaagcttttatttattattcatgagcttgttaaggtattttataataaaacaacttatgaaa 46689557  T
Q  580 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||||||||||||||| | | ||||||||| ||||||||| || ||||||||||| | ||| |||||||||||||||||||||    
T  46689556 ataaaattttcgttagtgagaacttatgaattaatataatagtttatttatttgcataagttatttttcataagctcaatcc 46689475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 733 - 813
Target Start/End: Complemental strand, 34549463 - 34549383
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 813  Q
    ||||| ||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34549463 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 34549383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 733 - 813
Target Start/End: Original strand, 45432374 - 45432454
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 813  Q
    ||||| ||||||||||||| |||||| |||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  45432374 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgccaaaaccccagctgaaagagtcaa 45432454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 485 - 633
Target Start/End: Original strand, 46473079 - 46473227
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| | ||  || ||||||||| |||||||||| |||||||  || || ||||  |||| |||||||  ||||||||  ||||||||    
T  46473079 ttgagcttatgcaaaacagcttgtgtaaataaataagcttttatttattattcatgaggtttttaaggtagtatatgaaaaaacaacttatgaagataaa 46473178  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
     ||||||||||||| ||||||||| ||||||||||| ||||||||||||    
T  46473179 gttttcgttaataagaacttatgaattaatataaaatcttatttatttg 46473227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 485 - 657
Target Start/End: Original strand, 13038932 - 13039105
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||| ||||||||||   || ||| ||||||||| |||||||| | |||||||  ||||||||||  ||||||||||||  ||||||||  ||||||||    
T  13038932 ttgaggttatgcaaaacggctgatgcaaataaataagcttttatatattattcatgagcttgttaaggtagtttatgaaaaaacaacttatgaagataaa 13039031  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
     ||||||||| | | || |||||| |||||||||||| ||||||||||| | ||| ||||||||||||| ||||    
T  13039032 gttttcgttagtgagaagttatgaattaatataaaagtttatttatttgcataagctatttttcataagttcaa 13039105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 740 - 816
Target Start/End: Complemental strand, 33936526 - 33936450
Alignment:
Q  740 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaatta 816  Q
    |||||||||||| ||||||||||| ||||||||||||| ||||||| |||||||| |||||||||||||||||||||    
T  33936526 taaaatggattatattactgaaagtctggagatttcaggacaaggagtgccaaaatcccagctgaaagagtcaatta 33936450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 511 - 657
Target Start/End: Original strand, 26988159 - 26988306
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||| |||||| ||||||||||||| |    
T  26988159 aaataaataagcttttatgtcttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattgtcgttagtaaaaacttatgaat 26988258  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||| ||||||||| ||||||||| | ||  ||||||||||||||||||    
T  26988259 taacataaaagctaatttatttgcataaactatttttcataagctcaa 26988306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 511 - 657
Target Start/End: Original strand, 28122627 - 28122776
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaata--aaaacttatga 608  Q
    ||||||||  |||||||||| |||||||  ||||| ||||  ||||||||||||  | |||||| ||||||||||||||||||| ||  ||||||| |||    
T  28122627 aaataaattagcttttatttattattcatgagcttcttaaggtagtttatgaaaaaataacttataaagataaaattttcgttagtaagaaaacttctga 28122726  T
Q  609 gttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
     |||||||||||||||||||||||  | ||  ||||||||||||||||||    
T  28122727 attaatataaaagcttatttattttcataaactatttttcataagctcaa 28122776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 488 - 633
Target Start/End: Original strand, 4068103 - 4068248
Alignment:
Q  488 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 587  Q
    ||||| ||||||||| ||  || ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||||||||  ||||||  |||    
T  4068103 agcttttgcaaaatagcttgtgcaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatactatt 4068202  T
Q  588 ttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    ||||||| | | ||||||||| |||||||||||| |||||||||||    
T  4068203 ttcgttagtgagaacttatgaattaatataaaagtttatttatttg 4068248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 13182744 - 13182647
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    |||||| |||||| ||||||| ||||||||| ||||| ||||||| | ||||| ||||||||||||| || |||||||||||||||||||| ||||||    
T  13182744 aagaaattaaaatagattaaaatactgaaagcctggaaatttcagtataaggagtgccaaaaccccaactaaaagagtcaattacaagaattccaaaa 13182647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 511 - 660
Target Start/End: Complemental strand, 36423056 - 36422906
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||||| ||||||| ||| |||||||  |||||||||||   ||||||||  ||||||||| |||||||| | | || |||| |      
T  36423056 aaataaataagcttttatttattattcataagtttgttaaggtagtttatgaataaacaacttatgaagataaaaatttcgttagtgagaagttataaaa 36422957  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||||||||||| ||||||||||| | ||| |||| |||||||| |||||||    
T  36422956 taatataaaagtttatttatttgcataagttattcttcataagatcaatcc 36422906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 512 - 656
Target Start/End: Complemental strand, 15515421 - 15515276
Alignment:
Q  512 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 611  Q
    |||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  | | ||||  |||||| ||||||||||| | | ||||||||| ||    
T  15515421 aataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaagagcttatgaagatacaattttcgttagtgagaacttatgaatt 15515322  T
Q  612 aatataaaagcttatttattt-gtaaagatatttttcataagctca 656  Q
    || || |||||||||||||||  | ||| |||||||||||||||||    
T  15515321 aacatgaaagcttatttatttacttaagctatttttcataagctca 15515276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 533 - 657
Target Start/End: Original strand, 37712100 - 37712225
Alignment:
Q  533 tattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttattt 632  Q
    |||||| |||||||| ||  ||||||||||||  ||||||||  |||||| || |||||||| ||| ||||||||| |||| ||||||| ||||||||||    
T  37712100 tattcataagcttgtcaaggtagtttatgaaaaaacaacttatgaagatacaactttcgttagtaagaacttatgaattaacataaaagtttatttattt 37712199  T
Q  633 gta-aagatatttttcataagctcaa 657  Q
    | | ||| |||||||| |||||||||    
T  37712200 gcataagctatttttcgtaagctcaa 37712225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 494 - 633
Target Start/End: Complemental strand, 35282686 - 35282547
Alignment:
Q  494 tgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgtt 593  Q
    ||||||| | || ||| ||||||||| || ||||||| ||||| | || | ||||||  ||||||||||||  ||||||||  |||||||||||||  ||    
T  35282686 tgcaaaacagcttatgcaaataaataagcgtttatttattatttataaacatgttaaggtagtttatgaaaaaacaacttatgaagataaaattttaatt 35282587  T
Q  594 aataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    | | ||||||||||| ||||||||||||  ||||||||||    
T  35282586 agtgaaaacttatgaattaatataaaagtctatttatttg 35282547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 37329487 - 37329340
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||  |||||||| | ||||||| || ||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||  | | ||||||| | |    
T  37329487 aaataaatgagcttttatgtattattcataaacttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttggtgagaacttataaat 37329388  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  37329387 taacataaaagcttatttatttgcataagttatttttcataagctcaa 37329340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 487 - 633
Target Start/End: Original strand, 51162256 - 51162402
Alignment:
Q  487 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 586  Q
    ||||||||||||| || || ||| ||||||||| || || || | ||||| ||||| |||||||  ||||||||||||  ||||||||  || ||| |||    
T  51162256 gagcttatgcaaagtagcttatgcaaataaataagcattaatgtattatttacaagtttgttaaggtagtttatgaaaaaacaacttatgaatatacaat 51162355  T
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    |||||||||||| | ||||| | |||| ||||||| ||| |||||||    
T  51162356 tttcgttaataagatcttataaattaacataaaagtttaattatttg 51162402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 487 - 635
Target Start/End: Original strand, 12256594 - 12256741
Alignment:
Q  487 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 586  Q
    |||||||||||||| |||| ||| |||||| || |||||||| | ||||| | ||| ||||| |  ||||||||||||  |||| |||  ||| || |||    
T  12256594 gagcttatgcaaaacaacttatgtaaataattatgcttttatatattatttataagattgttgatgtagtttatgaaaa-acaatttatgaaggtacaat 12256692  T
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta 635  Q
    |||||||| ||| ||||||||| |||| ||||||  |||||||||||||    
T  12256693 tttcgttagtaagaacttatgaattaaaataaaaatttatttatttgta 12256741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 485 - 632
Target Start/End: Complemental strand, 26946206 - 26946058
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 583  Q
    ||||||||||||||||   || ||| ||||||||| |||||| || | ||||||| |||||||||||  ||||||||||||  ||||||||  ||||||     
T  26946206 ttgagcttatgcaaaacggcttatgtaaataaataagctttttatgtgttattcataagcttgttaaggtagtttatgaaaaaacaacttatgaagatac 26946107  T
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttattt 632  Q
    ||||||| ||| | | ||||| ||| ||| || |||||||| |||||||    
T  26946106 aattttccttagtgacaacttgtgaattagtacaaaagcttgtttattt 26946058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 511 - 654
Target Start/End: Original strand, 48819310 - 48819454
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||  ||||| || | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| | |||| |||| | | ||||||||| |    
T  48819310 aaataaatgagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacattttttgttagtgagaacttatgaat 48819409  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||| ||||||||||||||||||| | ||| |||||||||||||||    
T  48819410 taacataaaagcttatttatttgcataagctatttttcataagct 48819454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 488 - 654
Target Start/End: Original strand, 10365159 - 10365325
Alignment:
Q  488 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 587  Q
    |||||||| ||||||| | ||| |||| ||||  ||||||| | ||||| | |||||||| ||| ||||||||||||  |||||  |  || ||| ||||    
T  10365159 agcttatgtaaaataatttatgcaaatgaataaacttttatgtattattaataagcttgtcaaagtagtttatgaaaa-acaaccgatgaatatacaatt 10365257  T
Q  588 ttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||||||| ||||||||| | | |||| ||||||||||||| ||||| | ||| |||||||||||||||    
T  10365258 ttcgttagtaaaaacttttaaattaacataaaagcttattcatttgcataagctatttttcataagct 10365325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 16889040 - 16888897
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||| ||| | | || |||||| |    
T  16889040 aaataaataagcttttatgtattattcataagcttgt-aaggtagtttatgaaaaaacagcttatgaagatacaattttcattagtgagaatttatgact 16888942  T
Q  611 taatataaaagcttatttatttgtaaagatatttttcataagctcaa 657  Q
    ||| |||||||||||||||||||   | | |||||||||||||||||    
T  16888941 taacataaaagcttatttatttg--cataaatttttcataagctcaa 16888897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 487 - 594
Target Start/End: Original strand, 49971238 - 49971345
Alignment:
Q  487 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 586  Q
    |||||||||||||| |||| ||| |||||||||  | ||||||| ||||| | |||||||||||  ||||||||||||  ||| ||||  |||||| |||    
T  49971238 gagcttatgcaaaacaacttatgcaaataaatattcctttatttattatttataagcttgttaatgtagtttatgaaaaaacagcttacgaagatacaat 49971337  T
Q  587 tttcgtta 594  Q
    ||||||||    
T  49971338 tttcgtta 49971345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 633
Target Start/End: Complemental strand, 6337831 - 6337709
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| ||||   | ||||||||| |    
T  6337831 aaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaatttttgttagcgagaacttatgaat 6337732  T
Q  611 taatataaaagcttatttatttg 633  Q
    ||| |||||||||||||| ||||    
T  6337731 taacataaaagcttatttgtttg 6337709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 584 - 652
Target Start/End: Complemental strand, 10850068 - 10849999
Alignment:
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataag 652  Q
    ||||||||||||| ||||||||| | |||| || |||||||||||||||||| ||| |||||||||||||    
T  10850068 aattttcgttaatgaaaacttataaattaacatgaaagcttatttatttgtataagttatttttcataag 10849999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 523 - 633
Target Start/End: Original strand, 12828145 - 12828257
Alignment:
Q  523 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaa--gataaaattttcgttaataaaaacttatgagttaatataaaa 620  Q
    |||||||| ||||||| ||  || ||||  ||||||||||||  |||||||| |||  |||||||||||||||||| |||||||||   |||||||||||    
T  12828145 ttttatttgttattcataaaatttttaaggtagtttatgaaaaaacaacttataaaaagataaaattttcgttaatgaaaacttatagattaatataaaa 12828244  T
Q  621 gcttatttatttg 633  Q
    | |||| ||||||    
T  12828245 gtttatctatttg 12828257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 480 - 633
Target Start/End: Original strand, 25485728 - 25485881
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    ||||||||| ||||| ||||| | || ||| |||||||||   |||||||| |||||||  | ||| ||||  ||||||||||||  |||| |||  |||    
T  25485728 ttggattgaacttatacaaaagagcttatgcaaataaataaatttttatttgttattcatgaccttattaaggtagtttatgaaaaaacaatttatgaag 25485827  T
Q  580 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    |||||||||||| || | |||| |||| | |||||||||||  |||||||||||    
T  25485828 ataaaattttcgctagtgaaaatttataaattaatataaaaatttatttatttg 25485881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 633
Target Start/End: Complemental strand, 36259324 - 36259244
Alignment:
Q  553 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    ||||||||||||  |||  ||| ||| ||| ||||||||||||| || |||||| | ||||||||||||||||||||||||    
T  36259324 tagtttatgaaaaaacagtttataaacatacaattttcgttaatgaagacttataaattaatataaaagcttatttatttg 36259244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 615 - 657
Target Start/End: Complemental strand, 1565345 - 1565303
Alignment:
Q  615 ataaaagcttatttatttgtaaagatatttttcataagctcaa 657  Q
    ||||||||||||||||||| |||| ||||||||||||||||||    
T  1565345 ataaaagcttatttatttgcaaagctatttttcataagctcaa 1565303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 491 - 657
Target Start/End: Complemental strand, 35897718 - 35897547
Alignment:
Q  491 ttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttat----gaaagtacaacttagaaagataaaat 586  Q
    |||||||||| |||| ||| ||||||||| | |||||||| ||||||| |||||| | ||| ||||||||    ||||  | |||||| || |||| |||    
T  35897718 ttatgcaaaacaacttatgcaaataaataagtttttatttattattcataagcttttcaaagtagtttatgaaggaaaaaaaaacttataacgatacaat 35897619  T
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||| ||| | |||| |||| | |||| ||||||| ||||||||||  | ||| ||||||||||||| ||||    
T  35897618 tttcattagtgaaaatttataaattaacataaaagtttatttatttacataagctatttttcataagttcaa 35897547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 657
Target Start/End: Original strand, 15791460 - 15791541
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||||| | | ||||| | |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  15791460 aagatacaattttcgttaatgagagcttataaattaaaataaaagcttatttatttacataagctatttttcataagctcaa 15791541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 497 - 633
Target Start/End: Original strand, 26542970 - 26543106
Alignment:
Q  497 aaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactt-agaaagataaaattttcgttaa 595  Q
    |||| |||| ||| ||||||||| |||||||| | ||||  | ||| |||||||  ||||||||||||  ||||||| |||||| || |||||||||||     
T  26542970 aaaacaacttatgcaaataaatatgcttttatgtattatatataagtttgttaatgtagtttatgaaaaaacaacttaagaaag-tacaattttcgttag 26543068  T
Q  596 taaaaacttatgagttaatataaaagcttatttatttg 633  Q
    | ||||||||| |||||| || |||  |||||||||||    
T  26543069 tgaaaacttataagttaagattaaaatttatttatttg 26543106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 511 - 631
Target Start/End: Complemental strand, 3069929 - 3069809
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    |||||| || ||||| || | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||||  || | | ||||||||| |    
T  3069929 aaataagtaagctttaatgtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcactagtgagaacttatgaat 3069830  T
Q  611 taatataaaagcttatttatt 631  Q
    ||| |||||||||||||||||    
T  3069829 taacataaaagcttatttatt 3069809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 577 - 660
Target Start/End: Original strand, 19395851 - 19395935
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    |||||| ||||||||||| | ||| ||||| | |||| |||||| ||||||||| | || ||| |||||||||||||||||||||    
T  19395851 aagatacaattttcgttagtgaaagcttataaattaaaataaaaacttatttatatatataagctatttttcataagctcaatcc 19395935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 577 - 633
Target Start/End: Original strand, 50919564 - 50919620
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    |||||| |||||||||||||||||||| || | |||| || ||||||||||||||||    
T  50919564 aagatacaattttcgttaataaaaactaataaattaacatgaaagcttatttatttg 50919620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 733 - 808
Target Start/End: Complemental strand, 26676980 - 26676905
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaaga 808  Q
    |||||||||||||||| || ||||||||| |  || | ||||||||||||| | ||| |||| |||||||||||||    
T  26676980 aagaaactaaaatggaatatattactgaacgcatgaatatttcagcacaagaagtgctaaaaacccagctgaaaga 26676905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 739 - 806
Target Start/End: Original strand, 31911555 - 31911622
Alignment:
Q  739 ctaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 806  Q
    ||||||| || || ||||||||||| ||| ||||||||| ||||||| || |||||| ||||||||||    
T  31911555 ctaaaattgaatatattactgaaagcctgaagatttcagtacaaggagtgtcaaaacgccagctgaaa 31911622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 523 - 657
Target Start/End: Complemental strand, 41196773 - 41196638
Alignment:
Q  523 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 622  Q
    |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| |||||| |||| | | | ||| ||| |||| ||||| ||    
T  41196773 ttttatgtattattcataagcttgtcaatgtagtttatgaaaaaacagcttatgaagatacaatttttgttagtgagagcttgtgaattaacataaaggc 41196674  T
Q  623 ttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||| | ||| |||||| |||||||||||    
T  41196673 ttatttatttgcataagctattttacataagctcaa 41196638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 584 - 657
Target Start/End: Original strand, 5347238 - 5347312
Alignment:
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||||| | |||||||   |||| ||||||||||||||||||  | ||| ||||||||||||||||||    
T  5347238 aattttcgttaatcagaacttatagattaaaataaaagcttatttatttacataagctatttttcataagctcaa 5347312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 600 - 634
Target Start/End: Original strand, 10082351 - 10082385
Alignment:
Q  600 aacttatgagttaatataaaagcttatttatttgt 634  Q
    ||||||||| |||||||||||||||||||||||||    
T  10082351 aacttatgaattaatataaaagcttatttatttgt 10082385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 577 - 657
Target Start/End: Complemental strand, 3116071 - 3115990
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||| ||| | ||||| | |||| ||||||||||| ||||||  | ||| ||||||||||||||||||    
T  3116071 aagatacaattttcgttagtaagatcttataaattaaaataaaagcttacttatttacataagttatttttcataagctcaa 3115990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 810
Target Start/End: Original strand, 28756478 - 28756555
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 810  Q
    ||||| |||||||| | || ||||||||| | ||| ||||||||||||||||| ||| |||| | || ||||||||||    
T  28756478 aagaagctaaaatgaaatatattactgaatgcctgaagatttcagcacaaggagtgctaaaaactcaactgaaagagt 28756555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 66; Significance: 1e-28; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 492 - 660
Target Start/End: Complemental strand, 32901242 - 32901073
Alignment:
Q  492 tatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcg 591  Q
    ||||||||| |||| ||| ||||||||| |||||||||| ||||||||||  ||||||| ||||||||| | |  ||||||||  |||||||||||||||    
T  32901242 tatgcaaaacaacttatgtaaataaataagcttttatttattattcacaaatttgttaagatagtttataagaaaacaacttatgaagataaaattttcg 32901143  T
Q  592 ttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||| | | |||||||   ||||||||||| | |||||||||| | ||| |||||||||||||||||||||    
T  32901142 ttagtgagaacttatattttaatataaaaacatatttatttgcataagctatttttcataagctcaatcc 32901073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 43971922 - 43971775
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |  |||| |||  |||||||||||||||||| | | |||||||   |    
T  43971922 aaataaataagcttttatttattattcacaagtttgttaaaatagtttatgagaaaacaatttatgaagataaaattttcgttagtgagaacttatattt 43971823  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||| ||||| | |||||||||| | ||| ||||||||||||||||||    
T  43971822 taatttaaaaacatatttatttgcataagttatttttcataagctcaa 43971775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 480 - 657
Target Start/End: Complemental strand, 3876369 - 3876191
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    ||||||||||||||| ||||| | || ||| ||||||||  |||||||||| ||||||| || || |||||  ||||||||||||  ||||||||  |||    
T  3876369 ttggattgagcttatacaaaacagcttatgtaaataaattagcttttatttattattcataatctagttaaggtagtttatgaaaaaacaacttaagaag 3876270  T
Q  580 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
     |||| |||| |||| |   ||||||||| ||||||||||| |||||||||||| | ||| ||||||||||||||||||    
T  3876269 gtaaagtttttgttagttctaacttatgaattaatataaaaacttatttatttgcataagctatttttcataagctcaa 3876191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 485 - 660
Target Start/End: Complemental strand, 33946643 - 33946475
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||||| || ||| ||||||||| |||||||||| |||||         |||||  || |||||||||   |||||||   |||||||    
T  33946643 ttgagcttatgcaaaatagcttatgcaaataaataagcttttatttattatta--------gttaaggtaatttatgaaaaaccaacttatgtagataaa 33946552  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    |||||||||||| | ||||||||| |||||||||||||| ||||||||| | ||| |||||||||||||||||||||    
T  33946551 attttcgttaatgagaacttatgaattaatataaaagctcatttatttgcataagctatttttcataagctcaatcc 33946475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 485 - 653
Target Start/End: Complemental strand, 34707814 - 34707645
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| |||| | | ||||| ||| |||||||| | ||||||| |||||||||||  ||||||||||||  ||| || |  |||||| |    
T  34707814 ttgagcttatgcaaaacaacttacgtaaatatataagcttttatgtattattcataagcttgttaaggtagtttatgaaaaaacagctaacgaagataca 34707715  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg-taaagatatttttcataagc 653  Q
    ||||||||||   | |||||| || |||| |||||| |||||||||||| | ||| ||||||||||||||    
T  34707714 attttcgttagcgagaacttacgaattaacataaaaacttatttatttgcttaagttatttttcataagc 34707645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 511 - 655
Target Start/End: Complemental strand, 43080009 - 43079864
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||| | | | ||||||||| |    
T  43080009 aaataaataagcttttatgtgttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgtgattgagaacttatgaat 43079910  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctc 655  Q
    |||  |||||||||||||||||| | ||| ||||||||||||||||    
T  43079909 taacttaaaagcttatttatttgaataagctatttttcataagctc 43079864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 485 - 657
Target Start/End: Original strand, 51409378 - 51409550
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||||||||| |||||| || ||| |||||||||  ||||||||| |||||||  || |||| ||  ||||||||||||  ||||||||  ||||||||    
T  51409378 ttgagcttatggaaaatagcttatgcaaataaataatcttttatttattattcatgagtttgtcaaggtagtttatgaaaaaacaacttatgaagataaa 51409477  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||| |  || | |||| |||||| ||||||||||| |||||||||||||| ||| || ||||||||| |||||    
T  51409478 atttccaatactgaaaaattatgaattaatataaaa-cttatttatttgtataagctacttttcataatctcaa 51409550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 40240652 - 40240505
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||| | |||||||| | ||||||| |||| |||  |  ||||||||||||  ||||||||  |||||| ||||||||||| | | | ||||||| |    
T  40240652 aaataaagaagcttttatgtattattcataagcgtgtctaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtgagagcttatgaat 40240553  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||| ||||||||||||||||||| | ||| ||||||||||||||||||    
T  40240552 taagataaaagcttatttatttgcataagctatttttcataagctcaa 40240505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 485 - 657
Target Start/End: Complemental strand, 22809295 - 22809121
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgctttt-attttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 583  Q
    ||||| |||||||||| | || ||| ||||||||| |||||| || | ||||||| |||||||| ||  ||||||||||||  ||  ||||  ||||||     
T  22809295 ttgaggttatgcaaaacagcttatgcaaataaataagctttttatatattattcataagcttgtcaaggtagtttatgaaaaaactgcttatgaagatac 22809196  T
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||||||||| || ||||||||| |||| |||||| |||||||||||| | ||| | | ||||||||||||||    
T  22809195 aattttcgttaagaagaacttatgaattaacataaaaacttatttatttgcacaagctttatttcataagctcaa 22809121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 485 - 649
Target Start/End: Complemental strand, 40581178 - 40581012
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-aaagtacaacttagaaagataa 583  Q
    |||||||||||||||| |||| ||| ||||||||| |||||||| | ||||| | |||||||| ||  ||||||||| |||  ||| | ||  |||| |     
T  40581178 ttgagcttatgcaaaacaacttatgcaaataaataagcttttatgtattattaataagcttgtcaaggtagtttatgaaaaaaacagcgtatgaagaaac 40581079  T
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcat 649  Q
    ||||||||||| | | ||||||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  40581078 aattttcgttagtgagaacttatgaattaacataaaatcttatttatttgcataagatatttttcat 40581012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 488 - 628
Target Start/End: Complemental strand, 53218138 - 53217998
Alignment:
Q  488 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatt 587  Q
    ||||||||||||| |||| |||  |||||||| | |||||| | ||||||| |||||||| ||  ||||||||||||  |||||||   |||||| ||||    
T  53218138 agcttatgcaaaacaacttatgcgaataaataagattttatgtattattcataagcttgtcaaggtagtttatgaaaaaacaacttttgaagatacaatt 53218039  T
Q  588 ttcgttaataaaaacttatgagttaatataaaagcttattt 628  Q
    ||||||| | | ||||||| | |||| ||||||||||||||    
T  53218038 ttcgttagtgagaacttataaattaaaataaaagcttattt 53217998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 576 - 660
Target Start/End: Original strand, 36266307 - 36266392
Alignment:
Q  576 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    |||||||  |||||||||||||||||||||| | |||| |||||| |||||||||||| | ||  |||||||||||||||||||||    
T  36266307 aaagatatgattttcgttaataaaaacttataaattaaaataaaaacttatttatttgcataaattatttttcataagctcaatcc 36266392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 511 - 657
Target Start/End: Original strand, 585031 - 585177
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| ||||||||   ||||||| |||||| || |  ||||||||||||  ||||||||  |||||| ||||||||||| |   |||||| || |    
T  585031 aaataaataagcttttatgcattattcaaaagcttcttgaggtagtttatgaaaaaacaacttatgaagatacaattttcgttagtttgaacttaagaat 585130  T
Q  611 taatataaaagcttatttatttgtaaagatatttttcataagctcaa 657  Q
    ||| ||| ||||||||| ||||| | |  ||||||||||||||||||    
T  585131 taacatataagcttattgatttgaataactatttttcataagctcaa 585177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 584 - 660
Target Start/End: Original strand, 38524172 - 38524249
Alignment:
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||||||||||| ||| | ||||||| |||| ||||||||||||||||||| | ||| | |||||||||||||||||||    
T  38524172 aattttcgttagtaagatcttatgaattaacataaaagcttatttatttgcataagctctttttcataagctcaatcc 38524249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 740 - 805
Target Start/End: Original strand, 50642392 - 50642457
Alignment:
Q  740 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaa 805  Q
    ||||||| |||| ||||||||||  ||||||||||||||| ||||| |||| ||||||||||||||    
T  50642392 taaaatgaattatattactgaaaacctggagatttcagcataaggagtgccgaaaccccagctgaa 50642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 485 - 596
Target Start/End: Original strand, 29270346 - 29270457
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| |||| ||   |||||||| |||||||| | ||||||| |||||| | || ||| |||||||||  ||| ||||  |||||| |    
T  29270346 ttgagcttatgcaaaacaacttataggaataaataagcttttatgtattattcataagcttttcaagataatttatgaaaaaacagcttatgaagataca 29270445  T
Q  585 attttcgttaat 596  Q
    ||||||||||||    
T  29270446 attttcgttaat 29270457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 577 - 658
Target Start/End: Original strand, 25341347 - 25341429
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaat 658  Q
    ||||||||||||||||||   ||||||| ||| ||||||||||| |||||||||||  | ||| | |||||||||||||||||    
T  25341347 aagataaaattttcgttagggaaaacttgtgaattaatataaaaacttatttatttacataagctctttttcataagctcaat 25341429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 633
Target Start/End: Complemental strand, 42956254 - 42956132
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| | |||||| | ||||||| || |||||  || |||||||||| |  ||| |||| ||||||| ||||||||||| | | ||||||| | |    
T  42956254 aaataaataagtttttatgtattattcataaacttgtcgaagtagtttatgataaaacagcttataaagatacaattttcgttagtgagaacttataaat 42956155  T
Q  611 taatataaaagcttatttatttg 633  Q
    ||| |||||| ||||||||||||    
T  42956154 taacataaaaacttatttatttg 42956132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 511 - 633
Target Start/End: Complemental strand, 45331370 - 45331248
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    |||||||||  ||||||| | |||| || ||||||||||| | |||||||||||  ||| ||||  |||||| |||||||| ||  || ||| ||||| |    
T  45331370 aaataaataaccttttatgtattatgcataagcttgttaagacagtttatgaaaaaacatcttatgaagatacaattttcgctagcaagaacatatgaat 45331271  T
Q  611 taatataaaagcttatttatttg 633  Q
    ||| ||||||| |||||||||||    
T  45331270 taacataaaagtttatttatttg 45331248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 596 - 660
Target Start/End: Original strand, 4974407 - 4974472
Alignment:
Q  596 taaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||||| ||||||| |||| ||||||||||||||||||| | ||| | |||||||||||||||||||    
T  4974407 taaaatcttatgaattaacataaaagcttatttatttgcataagctctttttcataagctcaatcc 4974472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 487 - 564
Target Start/End: Original strand, 10448761 - 10448838
Alignment:
Q  487 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 564  Q
    |||||||||||||| |||| ||| ||||||||| || ||||| | ||||| | |||||||||||  ||||||||||||    
T  10448761 gagcttatgcaaaacaacttatgcaaataaatatgcctttatgtattatttataagcttgttaatgtagtttatgaaa 10448838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 657
Target Start/End: Complemental strand, 17752140 - 17752059
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||||||| ||||||||||  | ||| ||||||||||||||||||    
T  17752140 aagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagctcaa 17752059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 657
Target Start/End: Complemental strand, 19053460 - 19053379
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||| ||| ||||||| | |||| ||||||| ||||||||||  | ||| ||||||||||||||||||    
T  19053460 aagatacaattttcgttagtaagaacttataaattaacataaaagtttatttatttacataagctatttttcataagctcaa 19053379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 657
Target Start/End: Complemental strand, 20174973 - 20174868
Alignment:
Q  553 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 651  Q
    ||||||||||||  ||||||||  || ||| ||||||||||| ||| | ||||||| |||  ||||||||||||||||||| | ||| | ||||||||||    
T  20174973 tagtttatgaaaaaacaacttatgaatatacaattttcgttagtaagatcttatgaattagcataaaagcttatttatttgcataagctctttttcataa 20174874  T
Q  652 gctcaa 657  Q
     |||||    
T  20174873 cctcaa 20174868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 584 - 660
Target Start/End: Original strand, 43376779 - 43376856
Alignment:
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    ||||||||  ||| ||||||||||| ||||||||||| |||||||| ||| | ||| | |||||||||||||||||||    
T  43376779 aattttcgcaaatgaaaacttatgaattaatataaaaacttatttagttgcataagctctttttcataagctcaatcc 43376856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 740 - 810
Target Start/End: Complemental strand, 20406473 - 20406403
Alignment:
Q  740 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 810  Q
    ||||||| | || ||||||||| | ||| ||||||||||||||||| ||||||||  ||||||| ||||||    
T  20406473 taaaatgaaatatattactgaacgcctgaagatttcagcacaaggagtgccaaaaatccagctggaagagt 20406403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 587 - 633
Target Start/End: Original strand, 27769736 - 27769782
Alignment:
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    |||||||||| ||||||||| | |||| |||||||||||||||||||    
T  27769736 tttcgttaatgaaaacttataaattaacataaaagcttatttatttg 27769782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 553 - 657
Target Start/End: Complemental strand, 48597900 - 48597794
Alignment:
Q  553 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaactta-tgagttaatataaaagcttatttatttgtaaaga-tatttttcata 650  Q
    |||| |||||||  ||||||||  |||||| ||||||||| | | | |||||| ||| |||| ||||||||||||||||||| ||| | |||||||| ||    
T  48597900 tagtgtatgaaaaaacaacttatgaagatacaattttcgtcagtgagaacttaatgaattaacataaaagcttatttatttgcaaacactatttttcgta 48597801  T
Q  651 agctcaa 657  Q
    |||||||    
T  48597800 agctcaa 48597794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 794
Target Start/End: Complemental strand, 15030167 - 15030106
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaa 794  Q
    |||| |||||||| || || ||||||||||| ||| |||||||||||||| || ||||||||    
T  15030167 aagagactaaaatagaatatattactgaaagcctgaagatttcagcacaaagagtgccaaaa 15030106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 540 - 633
Target Start/End: Complemental strand, 53787798 - 53787705
Alignment:
Q  540 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    |||||| |||| |||||||| ||||  |||  ||| ||||||| |||||| |||| | | ||||||||| |||| |||||| ||||||||||||    
T  53787798 aagctttttaatatagtttacgaaaaaacagtttataaagatataatttttgttattgagaacttatgaattaagataaaaacttatttatttg 53787705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 62; Significance: 3e-26; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 733 - 826
Target Start/End: Complemental strand, 19021489 - 19021396
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgcc 826  Q
    |||||||||||||||||||||||| ||||||  |||||||||||| | ||||| |||||||||||||||| |||||||||||||||||| ||||    
T  19021489 aagaaactaaaatggattaaattattgaaagcttggagatttcagtataaggagtgccaaaaccccagctaaaagagtcaattacaagagtgcc 19021396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 733 - 829
Target Start/End: Complemental strand, 22639659 - 22639563
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 829  Q
    ||||||||||||||||||||| |||||||||  ||||||||||| |||||||| |||||||||||||| | ||||||||| |||||||| |||||||    
T  22639659 aagaaactaaaatggattaaaatactgaaagtttggagatttcatcacaaggagtgccaaaaccccagttaaaagagtcagttacaagagtgccaaa 22639563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 7e-24
Query Start/End: Original strand, 733 - 830
Target Start/End: Original strand, 39143220 - 39143317
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||||||| ||| ||||| ||||||||||||||| ||||| |||||||| |  |||| |||||||||||||||||| ||||||||    
T  39143220 aagaaactaaaatggattaaaataccgaaagcctggagatttcagcataaggagtgccaaaatcatagctaaaagagtcaattacaagagtgccaaaa 39143317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 3e-23
Query Start/End: Original strand, 511 - 649
Target Start/End: Complemental strand, 13625596 - 13625456
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatga-aagtacaacttagaaagataaaattttcgttaataaaaacttatgag 609  Q
    ||||||||| |||||||||| ||||||| ||||||||| |  |||||||||| ||  ||| |||| ||||||||||||||||||| | ||||||||| |     
T  13625596 aaataaatatgcttttatttattattcataagcttgttgaggtagtttatgataaaaacagcttataaagataaaattttcgttagtgaaaacttataaa 13625497  T
Q  610 ttaatataaaagcttatttatttgta-aagatatttttcat 649  Q
    |||||||||||| ||||||||||| | ||| ||||||||||    
T  13625496 ttaatataaaagtttatttatttgcataagctatttttcat 13625456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 489 - 629
Target Start/End: Original strand, 42852011 - 42852150
Alignment:
Q  489 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattt 588  Q
    |||||||||||| | || ||  ||||||||| |||||||| | ||||||| |||||||| || |||||||||||||  |||||||| ||| ||| |||||    
T  42852011 gcttatgcaaaacagcttattcaaataaataagcttttatgtattattcataagcttgtcaagatagtttatgaaaaaacaacttataaa-atacaattt 42852109  T
Q  589 tcgttaataaaaacttatgagttaatataaaagcttattta 629  Q
    |||||| | | ||||||||| |||| |||||||||||||||    
T  42852110 tcgttagtgagaacttatgaattaacataaaagcttattta 42852150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 511 - 657
Target Start/End: Complemental strand, 40152951 - 40152804
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| | |||||||| |||| || ||  ||||||| |||||||||||||  |||| |||  |||||||||||||||||  | | ||||||||| |    
T  40152951 aaataaataagtttttatttattatccataaatttgttaagatagtttatgaaaaaacaatttatgaagataaaattttcgttcttgagaacttatgaat 40152852  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||| ||||||||||| | ||||| ||||||||||| ||||    
T  40152851 taatataaaagattatttatttgcataagatgtttttcataagttcaa 40152804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 733 - 830
Target Start/End: Complemental strand, 6537176 - 6537080
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaaa 830  Q
    ||||||||||||||||| ||||||||||||  ||||||||||||||| ||||| |||||||| |  |||| |||||||||||||||| |||| |||||    
T  6537176 aagaaactaaaatggatgaaattactgaaactctggagatttcagcataaggagtgccaaaatctaagct-aaagagtcaattacaaaaatgtcaaaa 6537080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 485 - 633
Target Start/End: Complemental strand, 7364410 - 7364262
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||||||||| |||| | || ||| ||| ||||| |||| ||||| ||||||| |||||||||||  |||||||| ||   ||||||||  |||||| |    
T  7364410 ttgagcttatgtaaaacagctgatgcaaaaaaataagcttctatttattattcataagcttgttaaggtagtttatcaacaaacaacttatgaagataca 7364311  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    || || |||| | | ||||||||| ||||||||||||||||||||||||    
T  7364310 atatttgttagtgagaacttatgaattaatataaaagcttatttatttg 7364262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 511 - 654
Target Start/End: Original strand, 28625491 - 28625635
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||  | ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| | | ||| ||||| |    
T  28625491 aaataaataagcttttaagtattattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacctatgaat 28625590  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||| ||||||||||||||||||| | ||| |||||||||||||||    
T  28625591 taacataaaagcttatttatttgcataagttatttttcataagct 28625635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 511 - 654
Target Start/End: Original strand, 24030226 - 24030369
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||||| |||||||| ||| ||||||||||||  ||| |||   | |||| ||||||||||| | | ||||||||| |    
T  24030226 aaataaataagcttttatgtattattcataagcttgtcaaagtagtttatgaaaaaaca-cttgcgaggatacaattttcgttagtgagaacttatgaat 24030324  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||| ||||||||||||||||||| | ||| ||||||| |||||||    
T  24030325 taacataaaagcttatttatttgcataagctatttttaataagct 24030369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 491 - 633
Target Start/End: Complemental strand, 13060697 - 13060555
Alignment:
Q  491 ttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttc 590  Q
    ||||| |||| |||| ||| ||||||||| |||||||| | || |||| |||||||| ||  ||||||||||||  ||| ||||  ||| ||  ||||||    
T  13060697 ttatgtaaaagaacttatgcaaataaataagcttttatgtattgttcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagttaccattttc 13060598  T
Q  591 gttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    |||| | | ||||||||| |||| |||||||||||||||||||    
T  13060597 gttagtgagaacttatgaattaacataaaagcttatttatttg 13060555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 540 - 657
Target Start/End: Original strand, 35536885 - 35537002
Alignment:
Q  540 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aag 638  Q
    |||||||| || |||||||||||||  ||| ||||  |||||| ||||||||||| | | |||||||||  ||||||||||||||||||||||| | |||    
T  35536885 aagcttgtcaagatagtttatgaaaaaacagcttatgaagatacaattttcgttactgagaacttatga-ataatataaaagcttatttatttgcataag 35536983  T
Q  639 atatttttcataagctcaa 657  Q
     |||||||||||| |||||    
T  35536984 ctatttttcataatctcaa 35537002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 485 - 657
Target Start/End: Complemental strand, 29922290 - 29922117
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| |  | ||| ||||||||| | |||||| | ||||||| |||||||| ||  ||||||||||||  ||| ||||   | ||| |    
T  29922290 ttgagcttatgcaaaacagtttatgcaaataaataagtttttatgtattattcataagcttgtcaaggtagtttatgaaaacacagcttatgcatataca 29922191  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||  ||| | | | ||||||| |||||||||||||||||||||||| | ||| |||||||||||| |||||    
T  29922190 attttttttagtgagagcttatgaattaatataaaagcttatttatttgcataagctatttttcataaactcaa 29922117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 577 - 657
Target Start/End: Original strand, 40697083 - 40697164
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| |||||| |||  | ||||||||||| |||| ||||||||||||||||||||| ||| ||||||||||||||||||    
T  40697083 aagatacaatttttgttcctgaaaacttatgaattaacataaaagcttatttatttgtataagctatttttcataagctcaa 40697164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 512 - 655
Target Start/End: Complemental strand, 11912176 - 11912032
Alignment:
Q  512 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagtt 611  Q
    |||||||| |||||||| | || |||| || ||||| ||| |||||| |||||  | | ||||  |||||| |||||| |||| | | ||||||||| ||    
T  11912176 aataaataagcttttatgtattgttcataatcttgtcaaagtagtttgtgaaaaaagagcttatgaagatacaatttttgttagtgagaacttatgaatt 11912077  T
Q  612 aatataaaagcttatttatttg-taaagatatttttcataagctc 655  Q
    || || |||||||||||||||| | ||||||||||||||||||||    
T  11912076 aacatgaaagcttatttatttgctcaagatatttttcataagctc 11912032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 740 - 799
Target Start/End: Complemental strand, 926818 - 926759
Alignment:
Q  740 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaacccca 799  Q
    |||||||||||| ||||||||||   |||||||||||||||||||| |||||||||||||    
T  926818 taaaatggattatattactgaaaatttggagatttcagcacaaggagtgccaaaacccca 926759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 487 - 629
Target Start/End: Original strand, 43318990 - 43319132
Alignment:
Q  487 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaat 586  Q
    |||||||||||||| |||| ||| ||||||||| |  ||||| | ||||| | |||||||||||  ||||||||||||  |||  |||  ||| || |||    
T  43318990 gagcttatgcaaaacaacttatgcaaataaatatgtctttatgtattatttataagcttgttaatgtagtttatgaaaaaacagtttatgaaggtataat 43319089  T
Q  587 tttcgttaataaaaacttatgagttaatataaaagcttattta 629  Q
    |||||||| | | ||||||||| |||| |||||| ||||||||    
T  43319090 tttcgttagtgagaacttatgaattaagataaaaacttattta 43319132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 485 - 632
Target Start/End: Complemental strand, 2878777 - 2878631
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||| ||| | || ||| ||||||||| |||||||| | ||||||| ||| |||| ||  | ||||||||||  |||  |||||| |||| |    
T  2878777 ttgagcttatgctaaacagcttatgcaaataaataagcttttatctattattcataagtttgtcaatgtggtttatgaaacaacagtttagaa-gataca 2878679  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttattt 632  Q
    ||||| |||| | ||||||| | | |||| ||||||||||||||||||    
T  2878678 atttttgttagtgaaaacttttaaattaacataaaagcttatttattt 2878631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 502 - 633
Target Start/End: Original strand, 17657244 - 17657375
Alignment:
Q  502 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 601  Q
    |||| ||| ||||||||| |||||||| | ||||||| |||||||  |   ||||||||||||  ||| ||||  ||||||  |||||||||| | | ||    
T  17657244 aacttatgcaaataaataagcttttatgtattattcataagcttgccattgtagtttatgaaaaaacatcttatgaagatacgattttcgttagtgagaa 17657343  T
Q  602 cttatgagttaatataaaagcttatttatttg 633  Q
    ||||||| |||| ||||||| |||||||||||    
T  17657344 cttatgaattaacataaaaggttatttatttg 17657375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 512 - 594
Target Start/End: Original strand, 1868858 - 1868940
Alignment:
Q  512 aataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgtta 594  Q
    |||||||| |||||||| | |||||||||||||||| ||  ||||||||||||   |||||||  |||||| |||||||||||    
T  1868858 aataaataagcttttatgtattattcacaagcttgtcaaggtagtttatgaaaaatcaacttatgaagatacaattttcgtta 1868940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 485 - 563
Target Start/End: Complemental strand, 22202037 - 22201959
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaa 563  Q
    |||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||  |||||||||||    
T  22202037 ttgagcttatgcaaaacagcttatgtaaataaataagcttttatgtattattcataagcttgtcaaggtagtttatgaa 22201959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 576 - 637
Target Start/End: Complemental strand, 11163292 - 11163231
Alignment:
Q  576 aaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgtaaa 637  Q
    ||||||| ||||||||||| |   ||||||||| |||| |||||||||||||||||||||||    
T  11163292 aaagatacaattttcgttagtgcgaacttatgaattaacataaaagcttatttatttgtaaa 11163231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 485 - 570
Target Start/End: Original strand, 17128263 - 17128348
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaa 570  Q
    |||||||||||||||| | || ||| ||||||||| |||||||| | ||||||| || ||| | ||| |||||||||||| |||||    
T  17128263 ttgagcttatgcaaaacagcttatgcaaataaataagcttttatgtattattcataaacttatcaaagtagtttatgaaaatacaa 17128348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 540 - 633
Target Start/End: Original strand, 28357181 - 28357274
Alignment:
Q  540 aagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    |||||||| ||  ||||||||||||  |||  |||  |||||| ||||||||||||  ||||||||| | |||| |||||||||||||||||||    
T  28357181 aagcttgtcaatgtagtttatgaaaaaacaggttatgaagatacaattttcgttaacgaaaacttataaattaacataaaagcttatttatttg 28357274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 485 - 660
Target Start/End: Complemental strand, 1372094 - 1371921
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||||||||||| |  | ||| |||||||||| ||||||| | ||||| | |||||||| ||  | ||||||||||  |||  | |  |||||  |    
T  1372094 ttgagcttatgcaaaacagtttatgtaaataaatacacttttatgtattatttataagcttgtaaatgtggtttatgaaaa-acagttgatgaagattta 1371996  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    |||||||||||| | | ||||| | |||| |||||| |||||||||||||| ||| |||||||||||||||||||||    
T  1371995 attttcgttaatgaga-cttataaattaacataaaa-cttatttatttgtataagttatttttcataagctcaatcc 1371921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 484 - 564
Target Start/End: Complemental strand, 10537321 - 10537241
Alignment:
Q  484 attgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 564  Q
    |||||||||||| |||| | || ||| ||||||||| |||||||| | ||||| | |||||||| || |||||||||||||    
T  10537321 attgagcttatgtaaaacagcttatgcaaataaataagcttttatgtattatttataagcttgtcaagatagtttatgaaa 10537241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 532 - 632
Target Start/End: Original strand, 41419533 - 41419633
Alignment:
Q  532 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 631  Q
    ||||||| |||||||| ||  ||||||||||||  ||| ||||  |||||| ||||||||||| | | ||||||| | |||| |||||| ||||||||||    
T  41419533 ttattcataagcttgtcaaggtagtttatgaaaaaacagcttatgaagatacaattttcgttagtgagaacttatcaattaacataaaaacttatttatt 41419632  T
Q  632 t 632  Q
    |    
T  41419633 t 41419633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 603 - 657
Target Start/End: Original strand, 6125389 - 6125444
Alignment:
Q  603 ttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| |||||||||||||||||||||||| | ||| ||||||||||||| ||||    
T  6125389 ttatgaattaatataaaagcttatttatttgcataagctatttttcataagttcaa 6125444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 511 - 657
Target Start/End: Original strand, 6144749 - 6144896
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||| ||| |||||||| ||  || |||||||||  | | ||||  || ||| |||||| ||||   | ||||||||| |    
T  6144749 aaataaataagcttttatatattactcataagcttgtcaaggtattttatgaaaaaatagcttatgaatatacaatttttgttagcgagaacttatgaat 6144848  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||||||||||| |||||||| | ||  ||||||||||||||||||    
T  6144849 taatataaaagcttgtttatttgcataaactatttttcataagctcaa 6144896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 489 - 564
Target Start/End: Original strand, 11991294 - 11991369
Alignment:
Q  489 gcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 564  Q
    |||||||||||| |||| ||| ||||||||| |||||||| | ||||| | |||||||| || || ||||||||||    
T  11991294 gcttatgcaaaacaacttatgtaaataaataagcttttatgtattatttataagcttgtaaatatggtttatgaaa 11991369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 740 - 807
Target Start/End: Original strand, 22580397 - 22580464
Alignment:
Q  740 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaag 807  Q
    ||||||||| || ||||||||||| ||  ||||||||| ||||| | || ||||||||||||||||||    
T  22580397 taaaatggaatatattactgaaagcctaaagatttcagtacaagaagtgtcaaaaccccagctgaaag 22580464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 553 - 631
Target Start/End: Original strand, 38498623 - 38498699
Alignment:
Q  553 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 631  Q
    ||||||||||||  |||| ||| ||||||| |||||| |||| | ||||||||| | |||| |||||||||||||||||    
T  38498623 tagtttatgaaa--acaatttataaagatataatttttgttagtgaaaacttataaattaaaataaaagcttatttatt 38498699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 532 - 657
Target Start/End: Complemental strand, 40452532 - 40452405
Alignment:
Q  532 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaatttt-cgttaataaaaacttatgagttaatataaaagcttatttat 630  Q
    ||||||| |||||||| ||  |||||||||||   ||| ||||  |||||| |||||| ||||| | | ||||||||| | || |||| |||||||||||    
T  40452532 ttattcataagcttgtcaaggtagtttatgaagaaacagcttatgaagatataatttttcgttagtgagaacttatgaataaacataatagcttatttat 40452433  T
Q  631 ttgta-aagatatttttcataagctcaa 657  Q
    ||| | ||| ||||||||||||||||||    
T  40452432 ttgcataagctatttttcataagctcaa 40452405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 515 - 657
Target Start/End: Complemental strand, 41059860 - 41059717
Alignment:
Q  515 aaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaat 614  Q
    ||||| |||||||| | ||||||| |||||| | ||  | ||||||||||   || ||||  |||||  ||||||||||| | | ||||||||| ||||     
T  41059860 aaataagcttttatgtattattcataagcttatcaaggttgtttatgaaaaatcaccttatgaagattcaattttcgttagtgagaacttatgaattaac 41059761  T
Q  615 ataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||||||||||| | ||  | ||||||||||||||||    
T  41059760 ataaaagcttatttatttgcataaactgtttttcataagctcaa 41059717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000009
Query Start/End: Original strand, 523 - 629
Target Start/End: Complemental strand, 23087842 - 23087736
Alignment:
Q  523 ttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagc 622  Q
    |||||| | ||||| | ||||||||||| |||||||||||||  |||||| |  ||| || |||||| |||| | | ||||||||| ||||||||||| |    
T  23087842 ttttatgtattatttataagcttgttaatatagtttatgaaaaaacaactcatgaaggtacaatttttgttagtgagaacttatgaattaatataaaaac 23087743  T
Q  623 ttattta 629  Q
    | |||||    
T  23087742 taattta 23087736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 806
Target Start/End: Original strand, 26368935 - 26369008
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 806  Q
    ||||| |||||||||| || ||||||||| | ||| | ||||||||||||| | ||| |||| |||||||||||    
T  26368935 aagaagctaaaatggaatatattactgaacgcctgaatatttcagcacaagaagtgctaaaaacccagctgaaa 26369008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 1e-25; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 480 - 654
Target Start/End: Original strand, 6758607 - 6758783
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    ||||||||||||||||||||| |||| ||| ||||||||| |||||| ||| |||| || |||||||||||  ||||||||||||    ||||||  |||    
T  6758607 ttggattgagcttatgcaaaacaacttatgcaaataaataagcttttgtttattatccataagcttgttaaggtagtttatgaaaaattaacttatcaag 6758706  T
Q  580 ataaaattttcgttaataaaaacttatgagttaatat-aaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||| || |||||||| | | ||||||||| ||||||| ||||||||||||||||| | ||| ||||||||| |||||    
T  6758707 atacaaatttcgttagtgagaacttatgaattaatataaaaagcttatttatttgcataagctatttttcagaagct 6758783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 485 - 660
Target Start/End: Original strand, 23239232 - 23239408
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||||||||| ||||||||| ||  ||||||||| |||||||||| ||||||| |||||||||||  | |||||| |||   ||| |||  | |||| |    
T  23239232 ttgagcttatgaaaaataacttatacaaataaataagcttttatttattattcataagcttgttaacgtggtttatcaaaaagcaaattatgacgataca 23239331  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatcc 660  Q
    | |||| ||| | | ||||||||| |||||||||||||||||||||||| | ||| |||||||||||||||||||||    
T  23239332 actttccttagtgagaacttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatcc 23239408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 733 - 813
Target Start/End: Original strand, 12912248 - 12912328
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 813  Q
    ||||| ||||||||||||| |||||| |||| ||||||||||||||||||||| || ||||||||||| ||||||||||||    
T  12912248 aagaagctaaaatggattatattactaaaagtctggagatttcagcacaaggagtgtcaaaaccccagatgaaagagtcaa 12912328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 734 - 822
Target Start/End: Complemental strand, 24394009 - 24393921
Alignment:
Q  734 agaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 822  Q
    |||| ||||||| ||||| |||||| |||| || |||||||||||||||||| ||||||||||  ||||||||||||||||||||||||    
T  24394009 agaagctaaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccttagctgaaagagtcaattacaagaa 24393921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 483 - 657
Target Start/End: Complemental strand, 29623580 - 29623406
Alignment:
Q  483 gattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagata 582  Q
    |||||||||||||||||| |||| ||| |||||||||  ||||||||| ||||| |  || |||||||  ||||||||||||  ||||||||  || |||    
T  29623580 gattgagcttatgcaaaacaacttatgcaaataaataaccttttatttattatttatgagtttgttaatgtagtttatgaaaaaacaacttatgaaaata 29623481  T
Q  583 aaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    || ||||||||| | | ||||||||| |||| || ||| |||||||||||| | ||| |||||||||||| |||||    
T  29623480 aagttttcgttagtgagaacttatgaattaacat-aaatcttatttatttgcataagctatttttcataaactcaa 29623406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 52; E-Value: 3e-20
Query Start/End: Original strand, 502 - 656
Target Start/End: Complemental strand, 32675973 - 32675818
Alignment:
Q  502 aactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaa 601  Q
    |||| ||| ||||||||| |||||||||| ||||||| ||||||  |||  | ||||||||||  | ||||||  |||||| ||||||| ||| | | ||    
T  32675973 aacttatgcaaataaataagcttttatttattattcataagcttcgtaaggttgtttatgaaaaaataacttatgaagatacaattttcattagtgagaa 32675874  T
Q  602 cttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctca 656  Q
    ||||||| ||||||||||| |||||||||||| | ||| |||||||||||||||||    
T  32675873 cttatgaattaatataaaaacttatttatttgcataagttatttttcataagctca 32675818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 480 - 659
Target Start/End: Complemental strand, 2040292 - 2040107
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatg-----aaagtacaactta 574  Q
    ||||||||||||||||||||| |||| ||  ||||||||| |||||||||| ||||||| ||| |||||||  || ||||||     |||  |||| |||    
T  2040292 ttggattgagcttatgcaaaacaacttatataaataaataagcttttatttattattcataagtttgttaaggtaatttatgaagaaaaaaaacaattta 2040193  T
Q  575 gaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatc 659  Q
     |||| || ||||||| ||| | | ||||||| | ||||||||||| |||||||||||| | ||| |||||||||| |||||||||    
T  2040192 taaagttacaattttcattagttagaacttataaattaatataaaaacttatttatttgcataagttatttttcatgagctcaatc 2040107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 485 - 653
Target Start/End: Complemental strand, 21891439 - 21891270
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||||||||||| |||| || ||| ||||||||| | ||| || | ||||||| |||||||| ||  ||||||||||||  ||||||||  |||||| |    
T  21891439 ttgagcttatgcagaatagcttatgcaaataaataagttttgatatattattcataagcttgtcaatgtagtttatgaaataacaacttatgaagataga 21891340  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagc 653  Q
    |||||||||   || ||||||||| |||| ||||||||||||| ||| | | ||| ||||||||||||||    
T  21891339 attttcgttcgcaagaacttatgaattaacataaaagcttattcattcgcataagctatttttcataagc 21891270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 734 - 813
Target Start/End: Complemental strand, 165610 - 165531
Alignment:
Q  734 agaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 813  Q
    |||||||||||||||||| |||| | |||| || |||||||||||||||| | || ||||||||||||||||||||||||    
T  165610 agaaactaaaatggattatattattaaaagtcttgagatttcagcacaagaagtgtcaaaaccccagctgaaagagtcaa 165531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 485 - 620
Target Start/End: Complemental strand, 3830020 - 3829885
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||||||||| ||||   || ||| |||||||||||||||||||| ||||||| ||  || |||   ||||||||||||  ||||||||  ||||||||    
T  3830020 ttgagcttatgaaaaacggcttatgcaaataaatacgcttttatttgttattcataaagtttttatggtagtttatgaaaaaacaacttatgaagataaa 3829921  T
Q  585 attttcgttaataaaaacttatgagttaatataaaa 620  Q
    ||||| |||||||| ||||||||| |||| ||||||    
T  3829920 atttttgttaataagaacttatgaattaacataaaa 3829885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 3e-17
Query Start/End: Original strand, 740 - 822
Target Start/End: Original strand, 18972621 - 18972703
Alignment:
Q  740 taaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaa 822  Q
    |||||| ||||| |||||| |||| || |||||||||||||||||| ||||||||||  ||||||||||| ||||||||||||    
T  18972621 taaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccttagctgaaagagacaattacaagaa 18972703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 511 - 655
Target Start/End: Complemental strand, 2034304 - 2034159
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| |||||||| | ||||| | ||| |||| ||  ||||||||||||  ||||||||  |||||| ||||||||| | ||| ||||||||| |    
T  2034304 aaataaataagcttttatgtattatttataagtttgtcaaggtagtttatgaaaaaacaacttaccaagatacaattttcgtaagtaataacttatgatt 2034205  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagctc 655  Q
     || ||||||||||||||||||| | ||| ||||| ||||||||||    
T  2034204 caacataaaagcttatttatttgcataagctatttatcataagctc 2034159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 485 - 633
Target Start/End: Original strand, 10873971 - 10874117
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    ||||| |||||||||||| || ||| | ||||||| |||||||| ||  ||| | |||||||||||  |||||||||| |  ||| ||||  |||||| |    
T  10873971 ttgagattatgcaaaatagcttatgcatataaataagcttttatatt--attaataagcttgttaaggtagtttatgagaaaacagcttatgaagataca 10874068  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    ||||| |||  | ||||||||||| |||| |||||||||||||||||||    
T  10874069 attttagttggtgaaaacttatgaattaacataaaagcttatttatttg 10874117  T

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Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 484 - 632
Target Start/End: Original strand, 2255718 - 2255866
Alignment:
Q  484 attgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataa 583  Q
    |||||||||||||||||  ||| ||| ||||||||  |||||||| | | ||||| |||||||||||  || |||||||||  ||| ||||  ||||||     
T  2255718 attgagcttatgcaaaacgacttatgcaaataaatgagcttttatgtatgattcataagcttgttaaggtaatttatgaaaaaacagcttatgaagatac 2255817  T
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttattt 632  Q
    |||||| | || | | ||| ||||| |||| ||||||||||||||||||    
T  2255818 aatttttggtagtgagaacatatgaattaacataaaagcttatttattt 2255866  T

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Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.0000000000001
Query Start/End: Original strand, 553 - 660
Target Start/End: Complemental strand, 10184363 - 10184255
Alignment:
Q  553 tagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 651  Q
    ||||||||||||  |||| |||  |||| | ||||||||||| ||| | ||||| | |||| |||||||||||||||||| || ||| ||||||||||||    
T  10184363 tagtttatgaaaaaacaatttatgaagaaacaattttcgttagtaagagcttataaattaaaataaaagcttatttatttatataagctatttttcataa 10184264  T
Q  652 gctcaatcc 660  Q
    |||||||||    
T  10184263 gctcaatcc 10184255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 733 - 806
Target Start/End: Complemental strand, 6029429 - 6029356
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaa 806  Q
    ||||| |||||||||| || ||||||||||  ||| ||||||||||||||||| |||||||| ||||| |||||    
T  6029429 aagaagctaaaatggaatatattactgaaaatctgaagatttcagcacaaggagtgccaaaatcccagttgaaa 6029356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 603 - 659
Target Start/End: Original strand, 6752915 - 6752972
Alignment:
Q  603 ttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaatc 659  Q
    |||||| |||||||||||||||||||||||| | ||| ||||||||||||||||||||    
T  6752915 ttatgaattaatataaaagcttatttatttgcataagctatttttcataagctcaatc 6752972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 511 - 654
Target Start/End: Complemental strand, 2027251 - 2027107
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagt 610  Q
    ||||||||| ||||||||   ||||||| ||| |||| || | |||||||||||  ||| ||||  |||||| || ||| |||| ||| ||||||||| |    
T  2027251 aaataaataagcttttatgcattattcagaagtttgtcaagacagtttatgaaaaaacagcttatgaagatacaacttttgttagtaagaacttatgaat 2027152  T
Q  611 taatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||| ||||||| |||| |||||| | ||| |||||||||||||||    
T  2027151 taacataaaagtttatctatttgcataagctatttttcataagct 2027107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000009
Query Start/End: Original strand, 532 - 635
Target Start/End: Complemental strand, 7576915 - 7576812
Alignment:
Q  532 ttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatt 631  Q
    ||||||| ||||||||||| ||| ||||| |||  |||  |||  |||||| |||||||||| |||| ||||||| | |||| |||||| ||||||||||    
T  7576915 ttattcataagcttgttaacataatttataaaaaaacagtttatgaagatataattttcgttgataagaacttattaattaacataaaaacttatttatt 7576816  T
Q  632 tgta 635  Q
    ||||    
T  7576815 tgta 7576812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000004
Query Start/End: Original strand, 584 - 657
Target Start/End: Complemental strand, 10755285 - 10755211
Alignment:
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||| ||| ||||||||| |||| ||||||||||||||||||| | ||  ||||||||| ||||||||    
T  10755285 aattttcgttagtaagaacttatgaattaacataaaagcttatttatttgcataaactatttttcagaagctcaa 10755211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 577 - 657
Target Start/End: Complemental strand, 9764400 - 9764319
Alignment:
Q  577 aagataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||| ||||||||||||| || |||||| | |||| ||||||||||||||||||| | ||  ||||||||||||| ||||    
T  9764400 aagatacaattttcgttaatgaacacttataaattaacataaaagcttatttatttgcataaattatttttcataagttcaa 9764319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 511 - 564
Target Start/End: Original strand, 24625862 - 24625915
Alignment:
Q  511 aaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaa 564  Q
    |||||||||||||||||| | ||||||| |||||||||||  ||||||||||||    
T  24625862 aaataaatacgcttttatgtattattcataagcttgttaaggtagtttatgaaa 24625915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000006
Query Start/End: Original strand, 584 - 651
Target Start/End: Complemental strand, 10730210 - 10730142
Alignment:
Q  584 aattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataa 651  Q
    |||||| |||||||| ||||||||| |||| |||||| |||||||||||||| |||  |||||||||||    
T  10730210 aatttttgttaataagaacttatgaattaagataaaaacttatttatttgtataagtcatttttcataa 10730142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 487 - 574
Target Start/End: Original strand, 6632646 - 6632733
Alignment:
Q  487 gagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaactta 574  Q
    |||||||| ||||| |||| ||| ||||||||| |||||||| | ||||| | || ||||||||  ||||||||||||  ||||||||    
T  6632646 gagcttattcaaaacaacttatgcaaataaatatgcttttatgtattatttataaacttgttaatgtagtttatgaaaaaacaactta 6632733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 615 - 657
Target Start/End: Complemental strand, 23239275 - 23239232
Alignment:
Q  615 ataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  23239275 ataaaagcttatttatttgtataagttatttttcataagctcaa 23239232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 600 - 654
Target Start/End: Complemental strand, 35071414 - 35071359
Alignment:
Q  600 aacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||||||||| |||| ||||||||||||||||||| | ||| |||||||||||||||    
T  35071414 aacttatgaattaacataaaagcttatttatttgcataagctatttttcataagct 35071359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 733 - 810
Target Start/End: Original strand, 7734077 - 7734153
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagt 810  Q
    |||||||||||||| | || ||||||| | | ||| | ||||||||||||| | ||| ||||||||||||||||||||    
T  7734077 aagaaactaaaatgaaatatattactgca-gcctgtaaatttcagcacaagtagtgcaaaaaccccagctgaaagagt 7734153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 485 - 633
Target Start/End: Original strand, 10687292 - 10687443
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttat---tttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagat 581  Q
    |||||||||| ||||| | || ||| ||||||||| ||||| ||   |||||||||| |||| | ||||  ||||||||| ||  ||||||||   ||||    
T  10687292 ttgagcttattcaaaacagcttatgcaaataaataagctttgatgtatttttattcataagcctattaaggtagtttatgtaaaaacaacttatggagat 10687391  T
Q  582 aaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttg 633  Q
    | |||||||||||   | |||||||||  | | |||||||||||||||||||    
T  10687392 acaattttcgttagcgagaacttatgaactgacataaaagcttatttatttg 10687443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 733 - 829
Target Start/End: Complemental strand, 9677 - 9581
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattacaagaatgccaaa 829  Q
    ||||||||||||||||||||| |||| |||| ||| ||||||||||||||| | || ||||| ||||||| ||||||||| |||||||| |||||||    
T  9677 aagaaactaaaatggattaaaatactaaaagcctgaagatttcagcacaagaagtgtcaaaatcccagctaaaagagtcagttacaagagtgccaaa 9581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 53; Significance: 7e-21; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 53; E-Value: 7e-21
Query Start/End: Original strand, 733 - 813
Target Start/End: Complemental strand, 94980 - 94900
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 813  Q
    ||||| ||||||||||||| |||| | |||| ||||||||||||||||||||| |||||||| ||||||||||||||||||    
T  94980 aagaagctaaaatggattatattattaaaagcctggagatttcagcacaaggagtgccaaaatcccagctgaaagagtcaa 94900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 49; Significance: 2e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 49; E-Value: 2e-18
Query Start/End: Original strand, 733 - 813
Target Start/End: Complemental strand, 1077 - 997
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaa 813  Q
    ||||| ||||||||||||| |||||  |||| ||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  1077 aagaagctaaaatggattatattacaaaaagtctggagatttcagcataaggagtgacaaaaccccagctgaaagagtcaa 997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 44; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 44; E-Value: 0.000000000000002
Query Start/End: Original strand, 480 - 654
Target Start/End: Original strand, 1038 - 1213
Alignment:
Q  480 ttggattgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaag 579  Q
    |||||||  |||||| ||||| |||| ||| ||||||||| |||||||||| |||| || ||| |||||||  || |||||| ||  | ||||||  |||    
T  1038 ttggattaggcttatacaaaacaacttatgcaaataaataagcttttatttattatccataagattgttaaggtaatttatggaaaaataacttatgaag 1137  T
Q  580 ataaaattttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagct 654  Q
    ||| || |||| ||| | | |||||||   |||||||||||||||||||||||| | ||| |||||||||||||||    
T  1138 atacaaatttcattagtgagaacttatactttaatataaaagcttatttatttgcataagttatttttcataagct 1213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 733 - 818
Target Start/End: Complemental strand, 23894 - 23809
Alignment:
Q  733 aagaaactaaaatggattaaattactgaaaggctggagatttcagcacaaggattgccaaaaccccagctgaaagagtcaattaca 818  Q
    ||||| ||||||| ||||| |||||| |||| || |||||||||||||||||| ||||||||||  || |||||||| ||||||||    
T  23894 aagaagctaaaattgattatattactaaaagccttgagatttcagcacaaggagtgccaaaaccgtagttgaaagagacaattaca 23809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 488 - 657
Target Start/End: Original strand, 24733 - 24905
Alignment:
Q  488 agcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaa--tagtttatgaaagtacaacttagaaagataaaa 585  Q
    |||||| |||||| | || ||| ||||||||| |||||||| | ||||||| |||||||| ||||  ||||||||||||  ||| || |  |||||| ||    
T  24733 agcttaagcaaaacagcttatgcaaataaataagcttttatgtattattcataagcttgtcaaaaggtagtttatgaaaaaacagctaatcaagatacaa 24832  T
Q  586 ttttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    | ||| ||| | | ||||||| | |||| |||||| |||||||||||| | ||| || |||||||||||||||    
T  24833 tattcattagtgagaacttataaattaacataaaaacttatttatttgcataagctacttttcataagctcaa 24905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 38; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 38; E-Value: 0.000000000006
Query Start/End: Original strand, 485 - 657
Target Start/End: Complemental strand, 24489 - 24317
Alignment:
Q  485 ttgagcttatgcaaaataactaatgaaaataaatacgcttttattttttattcacaagcttgttaaaatagtttatgaaagtacaacttagaaagataaa 584  Q
    |||||||| | ||||| | || ||| ||||||||| |||| ||| | ||||||| |||||||| ||  ||||| || |||  ||||||||  |||||| |    
T  24489 ttgagcttctacaaaacagcttatgcaaataaata-gcttgtatgtattattcataagcttgtcaaggtagttgataaaataacaacttacgaagatata 24391  T
Q  585 attttcgttaataaaaacttatgagttaatataaaagcttatttatttgta-aagatatttttcataagctcaa 657  Q
    |||||||||| ||||||||| ||| |||  |||||||| |||||||||| | ||  || |||||||||||||||    
T  24390 attttcgttagtaaaaacttgtgaattatcataaaagcctatttatttgcataaactacttttcataagctcaa 24317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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