View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6745_high_24 (Length: 325)
Name: NF6745_high_24
Description: NF6745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6745_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 16 - 303
Target Start/End: Complemental strand, 53425490 - 53425203
Alignment:
| Q |
16 |
aatatcccaacttaccaaaaaccccatccctgacatgtaatgtttaaaagggtccatgcttccacacggtatcacaaaaccatagtataaatcctccttc |
115 |
Q |
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| T |
53425490 |
aatatcccaacttaccaaaaaccccatccctgacatgtaatgtttaaaagggtccatgcttccacacggtatcacaaaaccatagtataaatcctccttc |
53425391 |
T |
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| Q |
116 |
ggtaacggttttaacgattttaccaaactgtttaacctcacgtaggtgtcatcatctgctttcataacgtagtggtatggagggtaatctggtccattca |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53425390 |
ggtaacggttttaacgattttaccaaactgtttaacctcacgtaggtatcatcatctgctttcataacgtagtggtatggagggtaatctggtccattca |
53425291 |
T |
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| Q |
216 |
ctgtttcattgaaaatctctggtaaacttgtgaagaacgttgatgtttttcctttgttcatgttttctgtgcagttgagaattatgat |
303 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53425290 |
ctgtttcattgaaaatctctggtaaacttgtgaagaacgttgatgtttttcctttgttcatgttttctgtgcagttgagaattatgat |
53425203 |
T |
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