View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6745_high_31 (Length: 261)
Name: NF6745_high_31
Description: NF6745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6745_high_31 |
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Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 13 - 243
Target Start/End: Original strand, 15122027 - 15122257
Alignment:
| Q |
13 |
atgaacgccggtatctctattacaaaggcatccatatagagaaaatataaggaaatcactatatacgaaagttttacttggatttagaaaaccacgtcgt |
112 |
Q |
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| T |
15122027 |
atgaacgctggtatctctattacaaaggcatccatatagagaaaatataaggaaaccactatatacgaaagttttacttggatttacaaaaccacgtcgt |
15122126 |
T |
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| Q |
113 |
ctactatgagtctgatgttacaatcattccacgttaaataaactacggctgagccaaaccacttgaacaataatatcacatacattctaaaccatttcct |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
15122127 |
ctactatgagtctgatgttacaatcattccacgttaaataaactacggctgagccaaaccacttgaacaataatatcacatacattctaaaccatttcct |
15122226 |
T |
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| Q |
213 |
ccataacagaccatttaaatgcctaagatcc |
243 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
15122227 |
ccataacagaccatttaaatgcctaagatcc |
15122257 |
T |
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