View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF6745_high_33 (Length: 251)
Name: NF6745_high_33
Description: NF6745
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF6745_high_33 |
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Alignment Details
Target: chr2 (Bit Score: 203; Significance: 1e-111; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 24 - 234
Target Start/End: Complemental strand, 3638560 - 3638350
Alignment:
| Q |
24 |
gttggtttgatttgatgttagctaaattggtttgcaggatatatattaccgaaaagcgaaagaagaaggttggcgtgctcgaagtgcttttaaacttctt |
123 |
Q |
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| T |
3638560 |
gttggtttgatttgatgttagctaaattggtttgcaggatatatattaccgaaaagcgaaagaagaaggttggcgtgctcgaagtgcttttaaacttctt |
3638461 |
T |
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| Q |
124 |
cagatagatgaggaatttaacatttttgaaggtgcacattctcaaccttgaaagccgattttaatcattccgagtttgttgcatttatttttgtcatttt |
223 |
Q |
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| T |
3638460 |
cagatagatgaggaatttaacatttttgaaggtgcacattctcaaccttgaaagccgattttaattattccgagtttgttgcatttatttttgccatttt |
3638361 |
T |
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| Q |
224 |
tagcagagatg |
234 |
Q |
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||||||||||| |
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| T |
3638360 |
tagcagagatg |
3638350 |
T |
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